Differential expression: Growth on blood [Blood.vs.TYESA-0.2]

Differentially expressed genes in bacterial colonies grown in 10% defibrinated horse blood agar relative to TYES-agar containing 1/5 nutrients concentration, after 5 days at 18°C.

List of differentially expressed genomic elements (CDS and newly identified RNA elements).
Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.

Reference samples: TYESA-0.2_a, TYESA-0.2_b
Test samples: Blood_a, Blood_b

Locus Tag Name (v2) Feature type Location Clusters Base Expr. Delta Expr. Annotation Chromosome order Clusters order
THC0290_0002 CDS 2737:3408 + A1227 B418 C125 11.99 2.05 Protein of unknown function precursor 2 2299
THC0290_N_0001 intra 3409:3490 + A1552 B523 C143 13.84 -4.79 new transcription segment 3 2810
THC0290_N_0004 3prime-PT 4241:4559 + A1245 B419 C125 9.47 1.67 new transcription segment 5 2351
THC0290_N_0006 Rfp1 indep 5284:5631 - A1248 B419 C125 10.45 5.46 new transcription segment 10 2357
THC0290_0009 CDS 8244:9227 - A1710 B546 C143 13.52 -2.05 Band 7 family protein 16 3142
THC0290_0013 gidA CDS 15147:17018 + A409 B155 C43 10.56 1.45 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 23 523
THC0290_0017 CDS 22156:22707 - A733 B210 C55 9.74 -1.28 Protein of unknown function 32 1602
THC0290_N_0017 intra 22708:22762 - A733 B210 C55 8.36 -1.90 new transcription segment 33 1604
THC0290_0018 CDS 22763:23272 - A733 B210 C55 9.56 -1.10 Probable cAMP-binding protein 34 1603
THC0290_0020 holB CDS 23822:24970 - A1567 B528 C143 10.84 -1.89 Probable DNA polymerase III, delta prime subunit 36 2835
THC0290_N_0019 5prime 25240:25332 + A1244 B419 C125 14.76 2.08 new transcription segment 38 2342
THC0290_0021 remF CDS 25399:25836 + A1257 B421 C125 15.16 1.61 Gliding motility protein RemF precursor 40 2385
THC0290_0022 remG CDS 25871:27163 + A1257 B421 C125 16.16 1.89 Gliding motility protein RemG precursor 41 2386
THC0290_N_0021 intra 27164:27223 + A1256 B421 C125 12.81 1.82 new transcription segment 42 2382
THC0290_N_0022 intra 27224:27295 + A1256 B421 C125 13.15 1.64 new transcription segment 43 2383
THC0290_N_0023 3prime 32460:32570 + A1747 B546 C143 11.14 -3.76 new transcription segment 46 3264
THC0290_N_0028 3prime 48179:48337 + A1817 B557 C145 8.09 2.73 new transcription segment 57 3908
THC0290_N_0029 Rfp3 indep 49141:49425 + A1768 B546 C143 10.74 -2.61 new transcription segment 58 3650
THC0290_0046 CDS 68389:68934 - A588 B183 C44 8.75 -1.91 Probable ribosomal-protein-amino-adic N-acetyltransferase 84 933
THC0290_0057 CDS 78916:79563 - A918 B285 C78 8.84 1.64 Probable hydrolase 101 1851
THC0290_N_0051 3prime 87874:88509 + A130 B53 C18 7.06 5.89 new transcription segment 119 163
THC0290_N_0056 5prime 94104:94163 - A1430 B497 C142 10.82 -3.04 new transcription segment 125 2613
THC0290_0075 CDS 97345:97656 - A486 B172 C44 10.19 -1.32 Protein of unknown function 132 648
THC0290_N_0060 intra 99508:99741 - A486 B172 C44 10.14 -2.16 new transcription segment 135 649
THC0290_0084 CDS 108355:108948 + A736 B211 C55 10.46 1.60 Protein of unknown function 147 1608
THC0290_tRNA_0002 tRNA 109057:109130 - A1769 B546 C143 14.42 -2.06 transfer RNA-Asn 149 3770
THC0290_0085 CDS 109278:110612 - A1265 B422 C125 12.66 2.32 Probable M50 family membrane-associated zinc metalloprotease 151 2398
THC0290_N_0067 intra 110638:110698 - A643 B183 C44 5.06 2.40 new transcription segment 152 1398
THC0290_0093 feoA CDS 121549:121791 + A1494 B512 C143 11.73 -3.08 Ferrous iron transport protein A 163 2709
THC0290_N_0071 intra 123885:124433 + A1084 B365 C107 8.19 -3.21 new transcription segment 165 2075
THC0290_0096 CDS 125431:125595 - A1768 B546 C143 8.37 -2.30 Hypothetical protein 167 3577
THC0290_N_0076 5prime 131417:131569 + A205 B75 C24 11.92 -2.53 new transcription segment 177 256
THC0290_0102 CDS 131570:132853 + A204 B75 C24 10.49 -2.59 Protein of unknown function 178 252
THC0290_0103 CDS 133119:133640 + A204 B75 C24 9.58 -2.68 Protein of unknown function precursor 180 254
THC0290_0104 CDS 133660:134139 + A204 B75 C24 10.11 -2.44 Probable lipoprotein precursor 181 255
THC0290_0105 CDS 134151:135113 + A204 B75 C24 9.52 -1.93 Protein of unknown function precursor 182 253
THC0290_0107 CDS 136226:138043 - A1763 B546 C143 11.89 -1.55 Putative outer membrane protein precursor 186 3431
THC0290_0110 CDS 140658:140933 - A1768 B546 C143 13.40 -3.83 Putative plasmid stabilization system protein 189 3633
THC0290_0111 CDS 140930:141169 - A1768 B546 C143 13.51 -4.00 Hypothetical protein 190 3634
THC0290_0128 CDS 159521:159862 + A1244 B419 C125 14.37 2.59 Protein of unknown function precursor 213 2347
THC0290_N_0089 intra 159863:159978 + A1244 B419 C125 13.21 3.99 new transcription segment 214 2349
THC0290_0129 CDS 159979:160953 + A1248 B419 C125 14.07 2.98 Putative outer membrane protein precursor 215 2360
THC0290_N_0091 3prime 162010:162767 + A1820 B557 C145 7.51 4.04 new transcription segment 218 3912
THC0290_0133 CDS 163777:164133 - A304 B113 C32 9.20 -1.70 Protein of unknown function 224 389
THC0290_0140 batA CDS 171756:172757 - A677 B189 C46 11.18 1.57 BatA protein 238 1460
THC0290_0142 CDS 176106:176972 - A545 B180 C44 11.37 1.30 Protein of unknown function 241 770
THC0290_0143 CDS 177042:178046 - A853 B257 C70 12.73 1.27 ATPase, MoxR family 243 1774
THC0290_N_0104 intra 180662:180746 + A1552 B523 C143 7.08 -6.42 new transcription segment 248 2799
THC0290_N_0107 Rfp11 indep 182563:182671 + A1768 B546 C143 11.93 -4.24 new transcription segment 253 3598
THC0290_0151 CDS 184765:187650 - A536 B180 C44 13.09 -1.41 Probable TonB-dependent outer membrane receptor precursor 258 731
THC0290_tRNA_0004 tRNA 191804:191888 - A1768 B546 C143 12.64 -2.63 transfer RNA-Leu 267 3657
THC0290_N_0122 3prime 193972:194172 + A611 B183 C44 6.16 4.58 new transcription segment 271 1284
THC0290_N_0126 intra 202620:202692 - A611 B183 C44 6.23 3.88 new transcription segment 280 1291
THC0290_0173 CDS 217635:218969 - A1083 B365 C107 12.68 -1.75 Probable cell surface protein (Leucine-rich repeat protein) precursor 301 2069
THC0290_0174 CDS 219283:220551 - A1083 B365 C107 12.14 -1.34 Probable cell surface protein (Leucine-rich repeat protein) precursor 302 2072
THC0290_0176 CDS 221575:222702 - A1083 B365 C107 12.61 -1.72 Probable cell surface protein (Leucine-rich repeat protein) precursor 304 2070
THC0290_N_0140 repeated_region 224639:224914 - A1083 B365 C107 9.36 -2.10 new transcription segment 307 2061
THC0290_0181 CDS 228393:229796 - A1083 B365 C107 11.65 -1.32 Probable cell surface protein (Leucine-rich repeat protein) precursor 311 2060
THC0290_N_0142 repeated_region 229797:230072 - A1083 B365 C107 9.25 -2.31 new transcription segment 312 2062
THC0290_0186 CDS 234136:235122 - A1088 B365 C107 11.51 -3.25 Probable cell surface protein (Leucine-rich repeat protein) precursor 317 2085
THC0290_0194 sfp CDS 241896:242537 - A492 B173 C44 8.55 -1.73 Probable phosphopantetheinyl transferase 328 656
THC0290_0195 ahcY CDS 242763:244079 + A970 B307 C84 14.06 1.35 Adenosylhomocysteinase 330 1915
THC0290_N_0147 3prime 244080:244141 + A1670 B542 C143 10.81 2.01 new transcription segment 331 3059
THC0290_N_0148 5prime 244877:244927 + A1205 B414 C124 6.02 4.32 new transcription segment 333 2261
THC0290_0200 CDS 250231:250752 + A1715 B546 C143 13.06 1.34 Hypothetical protein 340 3158
THC0290_N_0154 3prime 250753:251441 + A1248 B419 C125 11.58 3.48 new transcription segment 342 2356
THC0290_N_0158 3prime 253476:253544 - A811 B244 C67 11.04 -1.49 new transcription segment 347 1711
THC0290_N_0159 intra 254489:254544 - A601 B183 C44 5.62 3.31 new transcription segment 349 1119
THC0290_0205 purN CDS 255026:255595 - A526 B180 C44 8.04 -1.91 Phosphoribosylglycinamide formyltransferase 351 711
THC0290_N_0164 intra 258359:258452 + A601 B183 C44 5.72 3.59 new transcription segment 358 1120
THC0290_0210 pykA CDS 258953:260383 + A833 B252 C69 12.25 2.12 Pyruvate kinase 360 1740
THC0290_0216 CDS 264266:265192 + A549 B181 C44 6.04 2.86 Probable transmembrane protein of unknown function 369 791
THC0290_0220 CDS 267649:268050 - A1790 B549 C143 10.90 -1.17 Hypothetical protein 376 3842
THC0290_0230 CDS 280355:281833 + A625 B183 C44 11.34 1.25 Probable amino acid-transporting permease 391 1340
THC0290_0232 hppD CDS 283454:284614 + A222 B82 C25 10.90 -1.10 4-hydroxyphenylpyruvate dioxygenase 396 283
THC0290_0234 CDS 285682:286608 + A674 B189 C46 12.08 1.95 Tryptophan 2,3-dioxygenase 400 1450
THC0290_N_0185 5prime 297877:297936 - A1769 B546 C143 11.58 -3.06 new transcription segment 412 3751
THC0290_0242 CDS 297963:298367 - A1768 B546 C143 12.59 -2.22 Probable lyase 413 3625
THC0290_0243 rbfA CDS 298577:298969 + A1768 B546 C143 13.77 -3.18 Ribosome-binding factor A 415 3604
THC0290_0245 queA CDS 300280:301329 - A1745 B546 C143 15.25 -1.44 S-adenosylmethionine:tRNA-ribosyltransferase- isomerase 418 3230
THC0290_N_0187 5prime 301330:301388 - A1745 B546 C143 15.03 -2.14 new transcription segment 419 3231
THC0290_0251 CDS 304650:305642 - A372 B141 C39 8.65 -2.76 Protein of unknown function 428 474
THC0290_N_0195 5prime 313769:313939 - A1769 B546 C143 9.92 -3.85 new transcription segment 438 3752
THC0290_0264 CDS 322321:323505 + A1756 B546 C143 8.64 -2.94 Transposase IS91 family 450 3360
THC0290_0265 CDS 323507:323950 + A1756 B546 C143 7.85 -2.90 Hypothetical protein 451 3361
THC0290_0267 CDS 324293:325300 + A1486 B509 C142 6.40 -3.83 Hypothetical protein precursor 455 2691
THC0290_0268 CDS 325622:327997 + A1576 B530 C143 11.16 -1.34 Truncated Eco57I restriction-modification methylase family protein 457 2847
THC0290_0275 CDS 332899:333825 - A1862 B574 C149 11.46 -1.83 Protein of unknown function 466 3961
THC0290_0276 CDS 334046:334363 - A1709 B546 C143 15.59 -3.02 Thioredoxin family protein 468 3133
THC0290_N_0209 3prime 343627:343736 - A832 B252 C69 6.44 5.07 new transcription segment 483 1739
THC0290_0287 metK CDS 343737:344987 - A854 B257 C70 12.78 2.22 Methionine adenosyltransferase 484 1776
THC0290_0296 CDS 355517:355957 - A1768 B546 C143 11.52 -2.03 Probable cytosine/adenosine deaminase 499 3623
THC0290_0298 dxs CDS 356654:358429 + A1252 B419 C125 10.78 1.62 1-deoxy-D-xylulose-5-phosphate synthase 501 2370
THC0290_0304 CDS 370460:371698 + A1348 B467 C136 11.29 1.87 Probable transmembrane protein of unknown function 510 2500
THC0290_0305 CDS 371748:372044 + A1699 B546 C143 12.53 -1.67 Thioredoxin family protein 511 3113
THC0290_0306 CDS 372055:372684 - A1049 B346 C102 9.01 -1.93 Probable polysaccharide deacetylase 513 2014
THC0290_0312 yggG CDS 381240:382067 + A1762 B546 C143 14.34 -1.51 Putative secreted M48 family metalloprotease YggG precursor 523 3398
THC0290_0316 CDS 387602:388201 + A1040 B344 C102 13.32 -1.51 Hypothetical protein precursor 528 2001
THC0290_N_0230 intra 388202:388287 + A1040 B344 C102 13.43 -1.30 new transcription segment 529 2002
THC0290_0324 CDS 395386:395604 + A1767 B546 C143 12.84 -1.77 Hypothetical protein 541 3574
THC0290_0325 CDS 395604:395825 + A1767 B546 C143 12.95 -1.85 Hypothetical protein 542 3575
THC0290_N_0236 intra 395826:395917 + A1767 B546 C143 14.61 -1.74 new transcription segment 543 3573
THC0290_0330 CDS 399755:400099 - A1767 B546 C143 10.60 -2.10 Putative transcriptional regulator 552 3572
THC0290_N_0247 3prime 416229:416973 - A130 B53 C18 6.87 4.48 new transcription segment 562 164
THC0290_0338 CDS 416249:416977 + A902 B280 C77 9.11 -1.79 Probable tRNA/rRNA methyltransferase 563 1832
THC0290_N_0248 Rfp25 indep 418605:418919 + A1760 B546 C143 14.07 -1.88 new transcription segment 566 3379
THC0290_0353 gene 436626:437957 - A1203 B413 C124 9.58 1.38 Divergent AAA domain protein 589 2258
THC0290_0354 rpbA CDS 438303:438704 - A971 B307 C84 14.74 -2.00 Putative RNA-binding protein RbpA 591 1918
THC0290_N_0267 5prime 446871:447017 + A1762 B546 C143 12.17 -2.70 new transcription segment 607 3396
THC0290_0366 CDS 447661:448809 + A1776 B546 C143 13.70 1.80 Cys/Met metabolism PLP-dependent enzyme 611 3802
THC0290_N_0270 3prime 448810:448861 + A1363 B469 C136 11.65 2.46 new transcription segment 613 2526
THC0290_N_0271 3prime 448838:448909 - A1795 B549 C143 14.26 -1.87 new transcription segment 614 3861
THC0290_0368 CDS 449469:450680 - A1670 B542 C143 9.29 2.61 Probable lipoprotein precursor 617 3060
THC0290_0376 pstB CDS 460164:460922 + A1492 B512 C143 10.43 -1.55 ABC-type phosphate-transport system, ATPase component PstB 626 2703
THC0290_0377 phoU CDS 460961:461689 + A1492 B512 C143 10.05 -1.77 Phosphate transport system protein PhoU 627 2704
THC0290_N_0276 3prime 465495:465656 - A162 B61 C19 4.98 2.20 new transcription segment 634 202
THC0290_N_0277 3prime 465566:466070 + A132 B53 C18 6.25 4.22 new transcription segment 635 167
THC0290_N_0290 3prime 487606:488796 + A1644 B540 C143 9.11 2.81 new transcription segment 665 2987
THC0290_0402 CDS 490800:493382 + A1260 B422 C125 12.76 2.16 Outer membrane protein precursor, AsmA family 668 2390
THC0290_N_0292 3prime 493173:493641 - A196 B70 C21 6.27 4.73 new transcription segment 669 243
THC0290_N_0294 5prime 494437:494488 - A1552 B523 C143 13.13 -6.02 new transcription segment 672 2805
THC0290_0404 CDS 494527:495138 + A76 B35 C14 9.49 -1.66 Protein of unknown function 673 87
THC0290_0412 CDS 502402:502551 - A386 B147 C41 8.66 -1.79 Hypothetical protein 690 495
THC0290_N_0304 3prime 506982:507043 + A1552 B523 C143 12.98 -6.23 new transcription segment 696 2806
THC0290_0418 apaG CDS 509450:509836 - A1702 B546 C143 14.20 -2.63 Protein ApaG 700 3120
THC0290_0423 map CDS 513904:514722 - A1569 B528 C143 11.89 -1.78 Methionine aminopeptidase 706 2837
THC0290_0427 CDS 519196:519870 - A1719 B546 C143 10.23 -2.49 Probable transcriptional regulator, TetR family 710 3166
THC0290_0431 thiS CDS 525052:525258 + A730 B209 C54 11.70 2.75 Thiamine biosynthesis protein ThiS 719 1598
THC0290_N_0313 intra 525259:525356 + A730 B209 C54 10.29 3.92 new transcription segment 720 1599
THC0290_0432 thiC CDS 525357:527180 + A730 B209 C54 11.03 4.78 Thiamine biosynthesis protein ThiC 721 1597
THC0290_N_0314 intra 527181:527231 + A728 B209 C54 8.41 6.80 new transcription segment 722 1590
THC0290_0437 thiH CDS 530071:531192 + A728 B209 C54 7.52 5.29 Thiazole biosynthesis protein ThiH 728 1592
THC0290_0438 thiF CDS 531214:531924 + A728 B209 C54 8.29 3.25 Molybdopterin and thiamine biosynthesis protein 729 1591
THC0290_N_0323 3prime 539313:539818 + A1835 B563 C145 4.95 2.14 new transcription segment 741 3928
THC0290_0453 ilvD CDS 549225:550901 - A1197 B412 C124 7.29 2.21 Dihydroxy-acid dehydratase 750 2240
THC0290_0455 CDS 552623:553387 + A1134 B380 C111 13.26 1.32 Protein of unknown function 754 2166
THC0290_N_0328 3prime-PT 553432:553812 + A87 B41 C15 9.25 1.95 new transcription segment 756 103
THC0290_N_0336 3prime 564168:564864 + A1252 B419 C125 11.29 2.50 new transcription segment 775 2374
THC0290_0470 CDS 567208:567639 + A1768 B546 C143 14.50 -1.94 Protein of unknown function 783 3644
THC0290_0471 uspA CDS 567685:568509 - A1042 B344 C102 14.43 -1.48 Universal stress protein UspA 784 2005
THC0290_N_0342 5prime 568510:568559 - A1042 B344 C102 14.10 -2.50 new transcription segment 785 2006
THC0290_0473 nusA CDS 569172:570413 + A639 B183 C44 11.80 1.15 Transcription elongation protein NusA 788 1390
THC0290_0474 infB CDS 570467:573370 + A599 B183 C44 11.47 1.25 Translation initiation factor IF-2 790 1001
THC0290_N_0347 intra 579956:580112 + A637 B183 C44 13.80 1.38 new transcription segment 797 1375
THC0290_0477 gene 581578:581844 - A1768 B546 C143 8.79 -2.66 Truncated transposase IS256 family, N-terminal region 802 3618
THC0290_0484 CDS 589164:589526 - A1768 B546 C143 12.96 -2.03 Protein of unknown function 812 3612
THC0290_N_0353 5prime 589527:589618 - A1768 B546 C143 13.45 -2.06 new transcription segment 813 3613
THC0290_0488 CDS 594274:594957 + A841 B255 C69 10.73 2.01 Protein of unknown function 818 1758
THC0290_0494 CDS 600786:601169 - A1768 B546 C143 9.04 -2.04 Hypothetical protein 829 3610
THC0290_0501 CDS 607701:608105 - A1756 B546 C143 10.80 -1.83 Hypothetical lipoprotein precursor 837 3359
THC0290_0503 CDS 610102:610602 - A1765 B546 C143 12.03 -1.23 Protein of unknown function precursor 841 3544
THC0290_N_0366 intra 613818:613961 + A1818 B557 C145 7.91 3.35 new transcription segment 846 3909
THC0290_N_0368 repeated_region 615707:616002 + A1768 B546 C143 10.92 -1.44 new transcription segment 851 3621
THC0290_N_0372 repeated_region 633986:634186 - A1765 B546 C143 12.46 1.82 new transcription segment 863 3515
THC0290_0517 CDS 634225:634386 - A1765 B546 C143 12.99 2.55 Hypothetical protein 864 3514
THC0290_N_0373 intra 634387:634452 - A1765 B546 C143 15.02 1.29 new transcription segment 865 3513
THC0290_0518 CDS 634453:634626 - A1765 B546 C143 14.69 1.32 Conserved protein of unknown function 866 3512
THC0290_0519 CDS 634807:635154 - A1765 B546 C143 12.90 1.86 Conserved protein of unknown function 869 3504
THC0290_0532 CDS 649528:650709 - A1731 B546 C143 11.58 -1.99 Probable plasmid maintenance system antidote protein 889 3197
THC0290_0538 CDS 655176:655784 - A1746 B546 C143 13.38 -1.54 Protein of unknown function 900 3246
THC0290_N_0388 repeated_region 655785:656570 - A1252 B419 C125 11.10 1.51 new transcription segment 901 2367
THC0290_N_0390 Rfp30 indep 658610:658815 + A1762 B546 C143 12.25 -1.74 new transcription segment 906 3412
THC0290_0543 CDS 660017:661417 - A1252 B419 C125 11.04 1.09 Hypothetical protein 910 2373
THC0290_0544 CDS 662247:663131 + A1747 B546 C143 13.48 -1.77 Transposase IS982 family 913 3257
THC0290_0555 CDS 676958:678358 - A393 B150 C42 9.19 2.47 Probable type II restriction endonuclease Sau3AI 931 503
THC0290_0558 CDS 680341:681156 - A1370 B470 C136 9.38 2.77 Protein of unknown function 935 2537
THC0290_N_0403 intra 681237:681325 - A168 B62 C19 7.10 6.38 new transcription segment 937 209
THC0290_0559 CDS 681326:681646 - A1210 B415 C124 10.09 1.53 Protein of unknown function 938 2269
THC0290_0560 CDS 681664:682242 - A1210 B415 C124 9.45 2.86 Protein of unknown function 939 2270
THC0290_0571 CDS 696067:696396 - A1580 B530 C143 13.36 -1.19 Hypothetical protein 958 2851
THC0290_N_0412 repeated_region 696397:696658 - A1768 B546 C143 11.96 -1.75 new transcription segment 959 3592
THC0290_N_0416 intra 700198:700330 - A1697 B546 C143 11.46 -1.46 new transcription segment 966 3109
THC0290_N_0422 5prime 707542:707627 - A883 B273 C75 6.91 -5.12 new transcription segment 977 1809
THC0290_N_0423 3prime 708013:708480 - A1222 B417 C125 7.77 3.85 new transcription segment 980 2290
THC0290_N_0424 3prime 708493:708688 + A1645 B540 C143 9.85 3.02 new transcription segment 982 2997
THC0290_0583 yitI CDS 710191:710622 - A1243 B419 C125 12.69 2.24 Acetyltransferase, GNAT family, YitI 984 2327
THC0290_0586 CDS 712569:713072 + A1347 B467 C136 9.15 2.70 Protein of unknown function 990 2498
THC0290_0589 ruvB CDS 717168:718190 + A899 B279 C76 10.10 -1.26 Holliday junction DNA helicase RuvB 994 1828
THC0290_0594 CDS 729775:729990 + A599 B183 C44 7.33 3.20 Conserved protein of unknown function 1002 1021
THC0290_0600 CDS 736346:737788 - A1412 B488 C140 11.75 -1.44 Probable outer membrane efflux protein precursor 1013 2587
THC0290_N_0440 3prime 738918:739331 - A166 B61 C19 8.25 3.35 new transcription segment 1015 206
THC0290_0602 CDS 739332:739574 - A182 B66 C21 10.28 2.15 Hypothetical transmembrane protein 1016 227
THC0290_0604 ypmQ CDS 740193:740876 - A182 B66 C21 10.98 1.52 Probable cytochrome c oxidase biogenesis protein YpmQ 1020 226
THC0290_0611 CDS 745511:745864 - A1762 B546 C143 13.92 -1.29 Protein of unknown function 1029 3392
THC0290_0617 CDS 752305:752805 - A400 B152 C42 13.84 2.55 Outer membrane protein precursor OmpH family P18 1041 514
THC0290_0618 skp CDS 752849:753811 - A857 B258 C70 13.66 2.05 Outer membrane chaperone precursor Skp (OmpH) 1042 1780
THC0290_0619 bamA CDS 753852:756521 - A545 B180 C44 11.49 1.54 Outer membrane protein assembly complex precursor, BamA 1043 779
THC0290_N_0452 5prime 759692:759919 - A1768 B546 C143 12.00 -2.16 new transcription segment 1050 3636
THC0290_N_0455 intra 763149:763266 + A1574 B530 C143 11.70 -1.78 new transcription segment 1057 2844
THC0290_0633 CDS 767874:768443 + A1158 B395 C120 11.57 1.75 Probable membrane-associated phospholipid phosphatase 1069 2192
THC0290_N_0464 Rfp33 indep 768887:769220 + A1201 B413 C124 8.41 4.33 new transcription segment 1073 2255
THC0290_N_0467 3prime 779421:779788 - A1768 B546 C143 12.17 1.94 new transcription segment 1085 3729
THC0290_N_0471 intra 782411:782492 + A1364 B469 C136 11.33 2.31 new transcription segment 1093 2530
THC0290_0647 gldC CDS 782493:782816 + A1364 B469 C136 12.06 1.61 Gliding motility protein GldC 1094 2529
THC0290_0657 ftsW CDS 792469:793755 + A468 B169 C44 10.75 -1.09 Cell division protein FtsW 1109 615
THC0290_0658 murG CDS 793797:794900 + A467 B169 C44 7.59 -1.98 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1110 610
THC0290_0660 ftsQ CDS 796290:797012 + A1258 B422 C125 12.06 1.21 Cell division protein FtsQ 1113 2387
THC0290_0664 CDS 801393:802211 + A175 B63 C19 7.34 5.04 Probable transmembrane protein of unknown function 1122 218
THC0290_N_0484 3prime 802212:803155 + A1248 B419 C125 8.36 2.81 new transcription segment 1125 2359
THC0290_N_0485 3prime 803148:803240 - A1242 B419 C125 12.37 1.74 new transcription segment 1127 2320
THC0290_0671 phrB3 CDS 809155:810447 - A1742 B546 C143 9.91 -1.64 Deoxyribodipyrimidine photolyase PhrB3 1136 3225
THC0290_0677 CDS 815144:815599 - A1364 B469 C136 13.43 2.56 Protein of unknown function 1143 2527
THC0290_0690 yjgM CDS 825397:825891 + A1473 B507 C142 9.57 -1.04 Probable acetyltransferase YjgM 1159 2669
THC0290_0691 hemK CDS 825894:826751 + A42 B25 C13 8.65 1.38 Methylase of polypeptide chain release factors 1160 49
THC0290_0692 CDS 826788:828029 - A1747 B546 C143 12.38 -3.38 Probable ABC-type transport system, permease component 1162 3294
THC0290_N_0501 5prime 828254:828326 + A1577 B530 C143 13.26 -2.06 new transcription segment 1164 2848
THC0290_N_0503 3prime 829746:830044 + A175 B63 C19 6.25 4.56 new transcription segment 1167 219
THC0290_0702 CDS 839661:839945 - A1709 B546 C143 12.66 -1.71 Hypothetical protein 1182 3134
THC0290_N_0510 Rfp36 indep 840044:840245 - A1244 B419 C125 11.16 2.49 new transcription segment 1183 2343
THC0290_0707 CDS 844456:845016 + A1762 B546 C143 13.68 -1.66 Putative transcriptional regulator 1190 3410
THC0290_N_0517 3prime 845017:845453 + A1643 B540 C143 9.41 2.46 new transcription segment 1193 2986
THC0290_0728 groL CDS 864839:866467 - A840 B254 C69 13.84 2.31 60 kDa chaperonin GroEL 1225 1749
THC0290_N_0544 3prime 887134:887639 - A132 B53 C18 6.48 5.13 new transcription segment 1257 168
THC0290_N_0547 3prime 890208:890480 - A193 B70 C21 6.88 4.19 new transcription segment 1262 239
THC0290_0758 CDS 904166:904696 + A417 B158 C44 11.29 2.15 Probable lipoprotein precursor 1286 532
THC0290_0759 phhA CDS 904813:906567 + A1805 B554 C144 12.21 1.19 Phenylalanine 4-monooxygenase 1287 3892
THC0290_N_0558 3prime 906298:906570 - A192 B70 C21 6.54 4.87 new transcription segment 1288 238
THC0290_N_0562 5prime 908817:909008 - A893 B277 C76 12.70 -2.42 new transcription segment 1295 1821
THC0290_0775 CDS 926006:926245 + A1768 B546 C143 11.27 -1.79 Hypothetical protein 1317 3661
THC0290_0777 CDS 926970:927692 + A1244 B419 C125 12.52 2.60 Protein of unknown function precursor 1320 2345
THC0290_0781 CDS 929993:930601 - A1232 B419 C125 11.21 2.27 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1327 2305
THC0290_0782 CDS 930615:931109 - A1696 B546 C143 11.71 -1.99 RNA polymerase ECF-type sigma factor 1328 3106
THC0290_0790 CDS 940238:940999 + A578 B183 C44 11.41 1.45 Hypothetical protein 1341 866
THC0290_0791 CDS 941284:942165 + A1271 B425 C125 12.96 1.43 Protein of unknown function 1343 2405
THC0290_0798 CDS 952449:953249 - A529 B180 C44 7.40 -2.15 Hypothetical protein 1357 717
THC0290_0801 CDS 955843:956211 - A370 B141 C39 10.22 -1.62 Protein of unknown function 1364 472
THC0290_0811 CDS 966844:967311 + A1243 B419 C125 15.04 1.70 Putative muramidase 1380 2323
THC0290_N_0596 3prime 967312:967505 + A1243 B419 C125 13.44 1.97 new transcription segment 1381 2324
THC0290_N_0597 intra 968284:968363 + A1215 B416 C125 13.15 1.41 new transcription segment 1383 2280
THC0290_0813 purA CDS 968364:969635 + A1215 B416 C125 12.48 2.04 Adenylosuccinate synthase 1384 2279
THC0290_0814 CDS 969702:970469 - A1231 B419 C125 12.31 2.86 Protein of unknown function precursor 1385 2304
THC0290_0817 CDS 974932:975162 - A674 B189 C46 11.45 1.80 Protein of unknown function 1389 1454
THC0290_0818 osmC CDS 975242:975646 - A674 B189 C46 11.32 1.90 Putative stress-induced protein OsmC 1391 1455
THC0290_N_0601 Rfp42 indep 976566:976680 + A1248 B419 C125 10.11 5.35 new transcription segment 1393 2355
THC0290_0828 CDS 988051:988332 - A1762 B546 C143 13.73 -1.97 Protein of unknown function 1405 3391
THC0290_0829 CDS 988595:989146 + A1762 B546 C143 12.09 -2.01 Probable ribosomal-protein-amino-adic N-acetyltransferase 1406 3411
THC0290_0832 dcp2 CDS 990238:992370 - A1796 B549 C143 11.00 1.95 Peptidyl-dipeptidase precursor Dcp2 1410 3876
THC0290_N_0609 intra 993892:993972 + A952 B302 C82 6.28 4.40 new transcription segment 1415 1891
THC0290_0835 rplS CDS 994041:994391 + A910 B282 C77 13.52 -1.23 50S ribosomal protein L19 1417 1841
THC0290_0842 relA CDS 1001835:1004054 + A1564 B526 C143 12.49 -1.33 GTP diphosphokinase 1428 2831
THC0290_0855 priA CDS 1014075:1016525 + A611 B183 C44 8.11 1.71 Primosomal protein N' 1445 1286
THC0290_0864 CDS 1022534:1022812 + A1006 B320 C87 5.86 -2.83 Restriction endonuclease (fragment) 1459 1961
THC0290_N_0630 5prime 1029295:1029344 - A822 B248 C68 11.51 1.85 new transcription segment 1469 1727
THC0290_0872 dapA CDS 1029395:1030276 - A822 B248 C68 12.33 1.85 Dihydrodipicolinate synthase 1470 1726
THC0290_0874 CDS 1030857:1031636 + A1616 B535 C143 11.67 -1.38 Putative 2 ,3 -cyclic phosphodiesterase 1472 2921
THC0290_N_0636 intra 1041661:1041713 - A1368 B470 C136 10.43 3.03 new transcription segment 1488 2535
THC0290_0885 CDS 1041714:1042898 - A1243 B419 C125 12.17 1.69 Probable lipoprotein precursor 1489 2321
THC0290_N_0639 intra 1048848:1048930 + A646 B183 C44 5.59 3.47 new transcription segment 1498 1406
THC0290_N_0640 3prime 1050883:1050942 + A969 B307 C84 9.60 1.48 new transcription segment 1500 1914
THC0290_0894 (yfcA) CDS 1053252:1054037 + A1753 B546 C143 13.10 1.51 Probable transmembrane protein of unknown function 1504 3347
THC0290_0895 CDS 1054120:1055541 + A1292 B436 C127 12.66 1.22 Probable metallo-beta-lactamase 1506 2430
THC0290_0897 CDS 1055873:1056070 + A1292 B436 C127 11.86 1.44 Hypothetical transmembrane protein 1508 2432
THC0290_N_0643 Rfp44 indep 1056450:1057043 + A1751 B546 C143 14.15 -1.28 new transcription segment 1510 3332
THC0290_0899 CDS 1057171:1058484 + A1198 B413 C124 6.93 4.81 Probable outer membrane efflux protein precursor 1511 2243
THC0290_N_0649 intra 1070504:1070653 + A1349 B467 C136 12.79 1.45 new transcription segment 1528 2502
THC0290_0912 CDS 1073443:1074720 + A601 B183 C44 7.32 2.36 Glycosyl transferase, group 1 family protein 1531 1137
THC0290_0913 pyrR1 CDS 1074804:1075340 + A1566 B528 C143 12.67 -2.01 Bifunctional protein : pyrimidine operon regulatory protein and uracil phosphoribosyltransferase 1532 2834
THC0290_0917 idi CDS 1078946:1079473 + A1709 B546 C143 12.25 -1.75 Isopentenyl-diphosphate delta-isomerase 1539 3135
THC0290_N_0653 intra 1079474:1079572 + A1048 B345 C102 11.80 -1.07 new transcription segment 1540 2013
THC0290_0924 CDS 1084988:1086520 + A207 B76 C24 6.76 -2.66 Probable transmembrane protein of unknown function 1552 266
THC0290_0925 CDS 1086697:1087044 + A1496 B512 C143 12.20 -1.41 Protein of unknown function 1553 2712
THC0290_0926 ftnA CDS 1087175:1087702 + A1414 B488 C140 14.85 1.25 Ferritin 1555 2589
THC0290_0927 CDS 1087764:1088015 - A1768 B546 C143 11.79 -2.19 Probable ferredoxin 1558 3652
THC0290_0931 CDS 1092634:1095516 + A1796 B549 C143 14.57 1.41 Collagenase precursor 1565 3878
THC0290_0937 CDS 1103877:1105271 + A1272 B425 C125 13.36 1.78 Protein of unknown function containing tetratricopeptide repeats 1576 2408
THC0290_N_0667 intra 1105272:1105424 + A1272 B425 C125 12.10 1.41 new transcription segment 1577 2410
THC0290_0938 aroE CDS 1105425:1106162 + A1272 B425 C125 12.13 1.50 Shikimate dehydrogenase 1578 2409
THC0290_N_0668 3prime 1105898:1106177 - A195 B70 C21 6.14 4.00 new transcription segment 1579 242
THC0290_N_0669 3prime 1106163:1106281 + A130 B53 C18 8.90 5.94 new transcription segment 1580 165
THC0290_N_0672 3prime-PT 1113082:1113329 + A1214 B415 C124 7.10 5.75 new transcription segment 1588 2278
THC0290_0945 CDS 1117380:1118318 + A1036 B342 C102 10.04 -1.51 Probable dioxygenase 1593 1996
THC0290_0947 CDS 1120307:1120960 - A1768 B546 C143 10.39 -1.46 Protein of unknown function precursor 1597 3698
THC0290_N_0677 5prime 1120961:1121203 - A1768 B546 C143 12.18 -3.29 new transcription segment 1598 3658
THC0290_N_0687 3prime 1134182:1134362 - A197 B70 C21 6.87 5.98 new transcription segment 1624 244
THC0290_N_0688 3prime 1134356:1134819 + A1820 B557 C145 7.83 4.15 new transcription segment 1625 3913
THC0290_0969 CDS 1138406:1138603 + A1751 B546 C143 14.36 -1.67 Protein of unknown function 1632 3335
THC0290_N_0695 Rfp46 indep 1143858:1144033 - A1709 B546 C143 11.33 -2.85 new transcription segment 1641 3136
THC0290_0976 CDS 1145386:1147335 - A745 B216 C56 9.97 1.20 Probable amino acid-transporting permease 1646 1619
THC0290_0989 mrsB2 CDS 1164238:1164624 - A823 B248 C68 11.46 1.59 Probable protein-methionine-S-oxide reductase MrsB2 1664 1728
THC0290_0990 mrsB1 CDS 1164703:1165185 - A1350 B467 C136 11.76 1.45 Probable protein-methionine-S-oxide reductase MrsB1 1666 2507
THC0290_0994 lon CDS 1168825:1171275 + A837 B254 C69 11.16 1.92 S16 family, ATP-dependent endopeptidase La 1672 1744
THC0290_N_0710 intra 1171276:1171449 + A836 B254 C69 6.93 3.39 new transcription segment 1673 1743
THC0290_1012 aspC2 CDS 1192373:1193563 + A621 B183 C44 12.64 1.04 Probable aspartate transaminase AspC2 1706 1330
THC0290_1014 CDS 1194317:1195657 + A710 B202 C53 8.93 2.75 Probable sigma-54 dependent two-component system response regulatory protein 1710 1544
THC0290_1024 CDS 1206629:1207081 - A1768 B546 C143 11.12 -2.64 Probable lipoprotein precursor 1723 3628
THC0290_1025 CDS 1207152:1207709 + A1781 B546 C143 11.33 1.38 Protein of unknown function 1724 3826
THC0290_1026 CDS 1207714:1208127 + A1810 B556 C144 11.04 2.51 Probable transmembrane protein of unknown function 1725 3898
THC0290_1027 gene 1208124:1208453 - A1452 B504 C142 10.58 -1.31 Conserved membrane protein of unknown function (fragment) 1726 2644
THC0290_1030 gene 1209004:1209357 - A1375 B472 C137 12.35 2.08 Sterol desaturase family protein (fragment) 1730 2543
THC0290_1042 cafA CDS 1218140:1219684 - A599 B183 C44 10.80 1.85 Ribonuclease G 1749 1006
THC0290_N_0738 intra 1219685:1219937 - A599 B183 C44 9.78 2.14 new transcription segment 1750 1007
THC0290_1050 CDS 1228194:1229117 - A1386 B477 C139 12.58 -3.64 Probable ABC-type transport system, ATPase component 1761 2555
THC0290_1056 CDS 1235407:1236027 + A556 B183 C44 10.45 2.91 Protein of unknown function 1771 806
THC0290_1057 CDS 1236086:1237453 + A556 B183 C44 11.20 1.62 Membrane protein containing an internal histidine kinase domain 1773 810
THC0290_1061 CDS 1238531:1239292 + A556 B183 C44 9.91 1.61 Two-component system response regulatory protein, LytTR family 1778 808
THC0290_1063 coxA CDS 1240263:1241282 - A1753 B546 C143 11.91 1.53 Cytochrome c oxidase assembly protein 1780 3343
THC0290_N_0750 intra 1245836:1245885 - A1550 B523 C143 13.80 -4.15 new transcription segment 1786 2796
THC0290_1082 dsbD CDS 1260927:1262939 - A119 B49 C18 10.76 1.55 Thiol:disulfide interchange protein DsbD precursor 1808 151
THC0290_1085 CDS 1265923:1266828 + A1243 B419 C125 14.00 3.79 Probable lipoprotein precursor 1812 2322
THC0290_1086 ddpX CDS 1266894:1267535 + A1361 B469 C136 10.58 2.47 D-alanyl-D-alanine dipeptidase 1813 2522
THC0290_N_0759 3prime 1267045:1267535 - A189 B69 C21 7.44 4.07 new transcription segment 1814 235
THC0290_N_0760 3prime 1267536:1267906 + A1263 B422 C125 7.82 5.56 new transcription segment 1816 2396
THC0290_1090 CDS 1270459:1271454 - A725 B207 C54 9.70 1.95 Probable M43 cytophagalysin family metalloprotease precursor 1819 1582
THC0290_1091 CDS 1271757:1272395 - A1259 B422 C125 9.80 2.75 Protein of unknown function precursor 1820 2388
THC0290_1092 CDS 1272429:1273133 - A1259 B422 C125 10.06 2.76 Protein of unknown function 1821 2389
THC0290_1106 CDS 1294577:1294918 - A1614 B535 C143 12.67 -1.69 Probable arsenate reductase (glutaredoxin) 1853 2910
THC0290_1113 CDS 1299423:1299896 - A1721 B546 C143 13.42 -2.49 Protein of unknown function 1862 3175
THC0290_N_0781 intra 1299897:1299959 - A1721 B546 C143 14.32 -2.75 new transcription segment 1863 3176
THC0290_1114 CDS 1299960:1300283 - A1721 B546 C143 14.55 -2.27 Probable transcriptional regulator, ArsR family 1864 3174
THC0290_1118 lolA CDS 1304216:1304857 + A417 B158 C44 11.22 1.77 Outer-membrane lipoprotein carrier protein precursor LolA 1869 533
THC0290_1119 CDS 1304863:1306317 + A668 B187 C46 10.05 2.86 Probable transmembrane protein of unknown function 1870 1442
THC0290_1120 ribBA CDS 1306304:1307440 + A578 B183 C44 10.48 2.04 Bifunctional enzyme : 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 1871 864
THC0290_N_0788 Rfp50 indep 1317285:1317803 + A1768 B546 C143 9.88 -2.09 new transcription segment 1885 3656
THC0290_N_0789 Rfp51 indep 1317710:1317802 - A1682 B545 C143 8.78 -3.12 new transcription segment 1886 3085
THC0290_1133 CDS 1324450:1325334 - A1747 B546 C143 13.48 -1.69 Transposase IS982 family 1891 3256
THC0290_1135 CDS 1327350:1327610 - A1768 B546 C143 9.61 -2.01 Hypothetical protein 1893 3711
THC0290_1155 CDS 1345011:1346267 + A1527 B521 C143 5.29 -2.54 Probable NADH dehydrogenase 1913 2761
THC0290_1157 CDS 1348785:1349876 + A1523 B521 C143 6.42 -2.82 Putative transporting permease 1915 2756
THC0290_1165 CDS 1356605:1357303 + A1705 B546 C143 7.28 -3.57 Probable lipoprotein precursor 1923 3123
THC0290_1192 CDS 1379964:1380848 + A1747 B546 C143 13.43 -1.71 Transposase IS982 family 1952 3259
THC0290_1198 CDS 1383646:1384062 + A1541 B522 C143 6.60 -4.48 Probable transmembrane protein of unknown function 1958 2783
THC0290_N_0799 3prime 1412544:1412670 - A1741 B546 C143 11.45 -1.69 new transcription segment 1993 3221
THC0290_1218 CDS 1412671:1414131 - A365 B139 C39 12.33 -1.61 Protein of unknown function precursor 1994 467
THC0290_1219 CDS 1414128:1415435 - A1701 B546 C143 12.17 -1.94 Peptidase, M48 family 1995 3118
THC0290_N_0803 3prime-PT 1420133:1420201 + A167 B62 C19 6.25 4.79 new transcription segment 2005 208
THC0290_1232 CDS 1426026:1426304 - A1746 B546 C143 10.50 -3.68 Protein of unknown function 2014 3243
THC0290_1235 CDS 1427925:1428809 - A688 B193 C48 9.09 1.43 Probable transcriptional regulator, AraC family 2017 1493
THC0290_1236 CDS 1428816:1429214 - A1793 B549 C143 11.36 -1.19 Cytochrome c family protein 2018 3849
THC0290_1243 CDS 1435961:1436539 - A707 B201 C52 5.46 2.73 Probable transcriptional regulator, TetR family 2026 1537
THC0290_N_0811 intra 1438315:1438460 - A545 B180 C44 11.76 1.54 new transcription segment 2033 774
THC0290_1252 CDS 1446225:1446704 - A1762 B546 C143 14.65 -2.29 Universal stress protein, UspA family 2044 3425
THC0290_N_0820 3prime 1465659:1465713 - A628 B183 C44 6.47 4.71 new transcription segment 2061 1352
THC0290_1267 mscS2 CDS 1466605:1467867 + A813 B246 C67 10.06 1.30 Probable small-conductance mechanosensitive ion channel MscS2 2064 1713
THC0290_N_0821 3prime 1467104:1468011 - A1779 B546 C143 10.69 1.82 new transcription segment 2065 3813
THC0290_1270 CDS 1468900:1469292 + A1615 B535 C143 10.78 -1.93 Protein of unknown function 2068 2917
THC0290_N_0833 5prime 1489143:1489202 - A1709 B546 C143 11.71 -4.28 new transcription segment 2099 3140
THC0290_1291 CDS 1490287:1490424 - A1698 B546 C143 6.90 -4.05 Conserved protein of unknown function (fragment) 2102 3110
THC0290_1302 CDS 1500376:1501800 - A413 B156 C44 8.98 1.16 Probable ATP-dependent exodeoxyribonuclease 2123 528
THC0290_1304 CDS 1504654:1505688 - A470 B170 C44 5.74 -3.26 Probable transcriptional regulator, AraC family 2125 617
THC0290_1307 CDS 1507520:1509589 - A1775 B546 C143 10.24 1.63 Probable TonB-dependent outer membrane receptor precursor 2130 3800
THC0290_1325 CDS 1529121:1529963 + A319 B119 C33 9.51 -2.26 Probable transcriptional regulator, AraC family 2149 405
THC0290_N_0847 intra 1529964:1530048 + A319 B119 C33 10.00 -1.58 new transcription segment 2150 406
THC0290_1328 CDS 1530993:1533059 - A1701 B546 C143 9.26 -1.86 Probable M1 family metalloprotease precursor 2153 3119
THC0290_1329 CDS 1533134:1533868 + A891 B277 C76 8.58 -1.70 Protein of unknown function 2154 1819
THC0290_N_0851 intra 1556341:1556460 + A201 B73 C23 7.82 -1.26 new transcription segment 2176 248
THC0290_N_0867 3prime-PT 1580352:1580535 + A1676 B543 C143 7.47 2.74 new transcription segment 2210 3079
THC0290_N_0868 intra 1581049:1581297 - A1745 B546 C143 10.98 -2.46 new transcription segment 2212 3236
THC0290_1371 CDS 1582522:1583574 + A315 B119 C33 9.24 -2.32 Putative glutamine cyclotransferase 2218 401
THC0290_N_0870 3prime 1583575:1584025 + A1701 B546 C143 10.27 -1.89 new transcription segment 2219 3117
THC0290_N_0878 5prime 1591751:1591877 - A1614 B535 C143 10.41 -1.53 new transcription segment 2237 2909
THC0290_N_0880 intra 1595502:1595628 + A611 B183 C44 7.20 4.90 new transcription segment 2242 1288
THC0290_N_0881 intra 1597202:1597292 + A827 B249 C68 10.44 1.61 new transcription segment 2244 1733
THC0290_N_0884 Rfp62 indep 1606778:1606919 + A1243 B419 C125 13.75 2.41 new transcription segment 2258 2325
THC0290_N_0885 intra 1606920:1607067 + A1243 B419 C125 11.50 3.17 new transcription segment 2260 2326
THC0290_1393 thrS CDS 1607082:1609028 + A399 B152 C42 12.45 1.88 Threonine--tRNA ligase 2261 510
THC0290_1400 aldH CDS 1617164:1618492 - A600 B183 C44 7.02 -1.28 Aldehyde dehydrogenase 2277 1074
THC0290_N_0898 3prime 1626364:1626511 - A1565 B527 C143 6.34 -4.49 new transcription segment 2287 2833
THC0290_N_0899 3prime-PT 1626413:1626925 + A1819 B557 C145 6.97 3.36 new transcription segment 2288 3910
THC0290_1407 CDS 1626512:1627642 - A1054 B347 C103 8.44 -3.00 Probable membrane fusion efflux lipoprotein precursor 2289 2020
THC0290_1408 CDS 1627716:1632059 - A1054 B347 C103 9.94 -1.90 Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein 2290 2021
THC0290_1414 ltaE CDS 1636033:1637058 - A1768 B546 C143 13.64 -1.33 Threonine aldolase 2300 3637
THC0290_N_0904 5prime 1637059:1637201 - A1768 B546 C143 13.88 -3.12 new transcription segment 2301 3639
THC0290_N_0905 5prime 1637088:1637440 + A1563 B526 C143 13.61 -1.19 new transcription segment 2302 2829
THC0290_N_0910 3prime-PT 1651904:1652210 - A1745 B546 C143 11.10 -3.26 new transcription segment 2318 3240
THC0290_1426 CDS 1654815:1655510 - A1249 B419 C125 13.43 1.77 Protein of unknown function precursor 2321 2363
THC0290_1439 CDS 1671770:1672249 + A1746 B546 C143 9.12 -2.62 Putative transcriptional regulator, XRE family 2346 3244
THC0290_1441 speE CDS 1672956:1673624 + A1768 B546 C143 11.88 -1.67 Putative spermidine synthase 2350 3701
THC0290_1444 CDS 1675692:1676540 - A1762 B546 C143 12.78 -1.79 Protein of unknown function 2355 3424
THC0290_N_0935 3prime 1680695:1680922 + A163 B61 C19 5.97 3.58 new transcription segment 2363 203
THC0290_tRNA_0026 tRNA 1681166:1681243 - A1769 B546 C143 14.41 -1.87 transfer RNA-Pro 2366 3754
THC0290_N_0937 5prime 1681345:1681454 - A1762 B546 C143 10.73 -1.63 new transcription segment 2368 3420
THC0290_N_0939 3prime 1683788:1684364 - A301 B112 C32 7.05 -1.99 new transcription segment 2374 386
THC0290_1452 gltP (gltP) CDS 1684416:1685678 - A133 B53 C18 9.11 2.41 Probable proton glutamate symport protein GltP 2377 169
THC0290_1454 CDS 1687131:1687817 - A685 B193 C48 9.60 1.36 ThiJ/PfpI family protein 2380 1486
THC0290_N_0943 3prime 1688545:1688987 - A122 B50 C18 6.80 5.73 new transcription segment 2382 155
THC0290_N_0944 intra 1690140:1690189 - A1768 B546 C143 10.37 -2.23 new transcription segment 2384 3643
THC0290_N_0946 intra 1695609:1695759 - A611 B183 C44 5.51 2.90 new transcription segment 2389 1287
THC0290_1471 clpA CDS 1709029:1711584 + A1295 B438 C127 12.43 1.48 ATPase with chaperone activity ATP-binding subunit 2408 2437
THC0290_1473 CDS 1713087:1713590 + A611 B183 C44 7.39 3.29 Probable transmembrane protein of unknown function 2411 1289
THC0290_1480 CDS 1718908:1719456 - A303 B113 C32 9.31 -1.44 Protein of unknown function 2423 388
THC0290_N_0973 intra 1728230:1728476 + A372 B141 C39 9.52 -1.99 new transcription segment 2444 476
THC0290_1493 CDS 1728889:1729749 + A1232 B419 C125 12.36 1.49 Membrane protein, TerC family 2447 2306
THC0290_N_0977 5prime 1732129:1732257 - A1768 B546 C143 11.87 -2.32 new transcription segment 2451 3627
THC0290_N_0978 5prime 1732259:1732334 - A1762 B546 C143 10.76 -1.37 new transcription segment 2452 3417
THC0290_N_0979 3prime 1738057:1738101 + A93 B43 C16 5.73 3.19 new transcription segment 2455 109
THC0290_1502 CDS 1743248:1744315 + A1035 B342 C102 8.54 -1.86 Protein of unknown function 2465 1994
THC0290_N_0987 3prime 1748613:1748744 + A909 B282 C77 5.55 -3.19 new transcription segment 2472 1840
THC0290_N_0990 3prime 1752763:1753784 - A1223 B417 C125 9.14 1.69 new transcription segment 2478 2291
THC0290_1512 gene 1757982:1758200 + A1696 B546 C143 7.71 -2.68 Conserved exported protein of unknown function (fragment) 2481 3107
THC0290_1513 CDS 1758332:1759009 + A1433 B497 C142 8.92 -2.13 Probable transcriptional regulatory protein, Crp/Fnr family 2482 2617
THC0290_1517 gene 1760953:1761909 + A1416 B488 C140 6.54 -1.95 Conserved protein of unknown function 2487 2597
THC0290_N_1001 intra 1786123:1786261 - A611 B183 C44 6.55 2.76 new transcription segment 2512 1290
THC0290_1534 glyA CDS 1788482:1789756 - A1761 B546 C143 13.80 -1.05 Glycine hydroxymethyltransferase 2518 3381
THC0290_1538 CDS 1792954:1793694 - A1638 B540 C143 12.93 -1.80 Probable lipoprotein precursor 2527 2969
THC0290_1539 CDS 1793697:1795478 - A1638 B540 C143 11.50 1.65 Probable transmembrane protein of unknown function 2529 2970
THC0290_1540 CDS 1795484:1795813 - A1638 B540 C143 11.57 1.37 Probable transcriptional regulator, PadR family 2530 2972
THC0290_1543 CDS 1797232:1798140 + A1765 B546 C143 13.73 1.09 Probable nucleoside-diphosphate sugar epimerase 2537 3481
THC0290_N_1015 intra 1798910:1798967 + A831 B252 C69 6.47 5.23 new transcription segment 2540 1738
THC0290_N_1019 intra 1801177:1801257 + A1552 B523 C143 15.04 -3.71 new transcription segment 2545 2803
THC0290_1551 CDS 1804975:1805367 - A188 B69 C21 12.47 1.90 Protein of unknown function 2556 234
THC0290_1552 pyrE CDS 1805437:1806084 - A1266 B422 C125 12.26 2.44 Orotate phosphoribosyltransferase 2558 2399
THC0290_N_1027 5prime 1806085:1806310 - A1244 B419 C125 11.46 4.09 new transcription segment 2559 2350
THC0290_N_1028 5prime 1806149:1806265 + A894 B277 C76 9.34 -1.87 new transcription segment 2560 1823
THC0290_1555 CDS 1808272:1809813 - A1779 B546 C143 11.53 1.32 Protein of unknown function 2564 3821
THC0290_1556 CDS 1810067:1810495 + A1762 B546 C143 12.83 -1.91 Protein of unknown function 2565 3397
THC0290_N_1040 repeated_region 1817889:1818312 - A1008 B320 C87 7.36 -2.60 new transcription segment 2583 1963
THC0290_N_1044 3prime 1827108:1827653 - A172 B63 C19 7.68 3.51 new transcription segment 2593 213
THC0290_1572 fdx1 CDS 1830238:1830588 - A1768 B546 C143 14.22 -2.01 Ferredoxin 2597 3641
THC0290_N_1047 5prime 1830589:1830646 - A1768 B546 C143 13.42 -2.99 new transcription segment 2598 3642
THC0290_N_1049 3prime 1834673:1834858 + A1812 B556 C144 10.70 1.57 new transcription segment 2604 3900
THC0290_1577 CDS 1834996:1835421 + A1811 B556 C144 9.00 1.68 Probable lipoprotein precursor 2606 3899
THC0290_1579 CDS 1835787:1836098 - A1350 B467 C136 12.34 3.12 Protein of unknown function 2608 2505
THC0290_1580 folE1 CDS 1836146:1836817 - A1350 B467 C136 13.30 3.07 GTP cyclohydrolase I 2609 2506
THC0290_1585 CDS 1841110:1841760 - A1053 B346 C102 11.43 -2.03 Probable phosphatase/phosphohexomutase 2616 2018
THC0290_1586 CDS 1842055:1842597 + A1765 B546 C143 13.12 -3.44 RNA polymerase ECF-type sigma factor 2618 3498
THC0290_1587 CDS 1842628:1843008 + A1765 B546 C143 13.66 -2.86 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 2619 3499
THC0290_1588 CDS 1843019:1843477 + A1765 B546 C143 14.07 -2.34 Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor 2620 3500
THC0290_N_1054 3prime 1843478:1843604 + A1765 B546 C143 13.44 -1.14 new transcription segment 2621 3497
THC0290_1600 (lptF/lptG) CDS 1858321:1859406 - A575 B183 C44 8.47 2.16 Probable lipopolysaccharide export system permease protein, lptF/lptG family 2643 852
THC0290_1601 tgt CDS 1859480:1860610 - A575 B183 C44 11.37 1.52 Queuine tRNA-ribosyltransferase 2645 853
THC0290_N_1069 intra 1863168:1863219 - A577 B183 C44 6.93 2.97 new transcription segment 2650 859
THC0290_1603 CDS 1863220:1864086 - A323 B120 C33 11.81 -1.89 Probable superoxide dismutase 2651 410
THC0290_1608 ftsH CDS 1866522:1868453 - A837 B254 C69 12.26 1.50 Cell division protein FtsH 2656 1745
THC0290_N_1074 intra 1870713:1870829 - A671 B187 C46 10.52 1.47 new transcription segment 2662 1447
THC0290_1613 cysS CDS 1871062:1872549 - A671 B187 C46 11.56 1.16 Cysteine--tRNA ligase 2664 1446
THC0290_1615 CDS 1873536:1873964 + A1306 B445 C130 11.52 -2.45 Protein of unknown function 2668 2448
THC0290_N_1082 intra 1882842:1883282 - A1768 B546 C143 10.80 -1.64 new transcription segment 2681 3651
THC0290_1623 CDS 1885425:1885799 - A1747 B546 C143 10.13 -2.81 Protein of unknown function 2685 3254
THC0290_N_1084 5prime 1885800:1885859 - A1730 B546 C143 9.55 -4.89 new transcription segment 2686 3194
THC0290_N_1085 intra 1887120:1887284 + A174 B63 C19 6.74 2.79 new transcription segment 2689 216
THC0290_1626 CDS 1887285:1887971 + A765 B228 C63 11.22 -2.58 Probable ABC-type transport system, ATPase component 2690 1650
THC0290_N_1086 intra 1887972:1888054 + A389 B148 C41 9.69 -1.80 new transcription segment 2691 499
THC0290_1630 CDS 1892517:1893479 - A206 B76 C24 11.63 -2.27 Protein of unknown function precursor 2697 262
THC0290_1631 CDS 1893486:1894529 - A206 B76 C24 12.09 -2.31 Probable cytochrome c peroxidase precursor 2698 263
THC0290_N_1091 Rfp70 indep 1894584:1894642 + A1769 B546 C143 8.20 -3.06 new transcription segment 2700 3737
THC0290_N_1092 3prime 1894616:1894799 - A206 B76 C24 13.90 -2.36 new transcription segment 2701 258
THC0290_1632 CDS 1894800:1895606 - A206 B76 C24 13.46 -2.38 Probable lipoprotein precursor 2702 259
THC0290_N_1093 intra 1895607:1895729 - A206 B76 C24 12.39 -2.91 new transcription segment 2703 260
THC0290_1637 fsr CDS 1898436:1899650 - A573 B183 C44 5.82 2.97 Major facilitator superfamily (MFS) permease. Fosmidomycin resistance protein 2711 849
THC0290_N_1098 intra 1902069:1902203 - A396 B152 C42 8.59 3.37 new transcription segment 2717 506
THC0290_1654 CDS 1918439:1918975 - A1763 B546 C143 12.23 -2.88 RNA polymerase ECF-type sigma factor 2742 3435
THC0290_N_1111 5prime 1923081:1923154 + A1768 B546 C143 13.21 -3.89 new transcription segment 2747 3645
THC0290_1661 folC CDS 1925727:1926941 + A43 B25 C13 8.73 1.61 Bifunctional protein : Folylpolyglutamate synthase and Dihydrofolate synthase 2753 50
THC0290_N_1120 3prime 1932156:1932279 - A536 B180 C44 6.13 2.61 new transcription segment 2764 732
THC0290_1676 CDS 1944906:1945355 - A1768 B546 C143 10.38 -2.73 Protein of unknown function 2777 3630
THC0290_1679 phuR CDS 1947394:1949601 + A1209 B415 C124 9.21 3.47 Probable TonB-dependent outer membrane hemin receptor precursor PhuR 2783 2267
THC0290_N_1136 3prime 1955518:1956143 + A1784 B548 C143 9.66 2.26 new transcription segment 2792 3833
THC0290_1685 CDS 1957762:1958214 + A1720 B546 C143 15.17 -1.80 Probable transcriptional regulator, MarR-family 2796 3172
THC0290_N_1139 intra 1959662:1959707 + A922 B286 C78 5.48 3.01 new transcription segment 2801 1856
THC0290_1688 trpE CDS 1959708:1961108 + A718 B205 C53 8.81 1.48 Anthranilate synthase component I 2802 1565
THC0290_1689 pabA CDS 1961221:1961793 + A718 B205 C53 9.30 1.22 Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 2804 1566
THC0290_1690 trpD CDS 1961863:1962855 + A718 B205 C53 7.54 4.16 Anthranilate phosphoribosyltransferase 2806 1563
THC0290_1695 CDS 1966777:1967400 + A682 B191 C48 7.94 -3.43 Probable transcriptional regulator, TetR family 2815 1475
THC0290_1696 CDS 1967390:1968703 + A682 B191 C48 8.57 -2.04 Probable outer membrane efflux protein precursor 2816 1476
THC0290_1701 CDS 1974131:1975327 + A683 B191 C48 8.45 -1.35 Protein of unknown function precursor 2826 1482
THC0290_N_1150 intra 1977128:1977205 - A1768 B546 C143 13.52 -2.27 new transcription segment 2830 3702
THC0290_1704 CDS 1977206:1977442 - A1768 B546 C143 13.45 -2.78 Hypothetical transmembrane protein 2831 3662
THC0290_1708 CDS 1981738:1982421 + A532 B180 C44 7.60 -2.21 Hypothetical protein 2836 725
THC0290_1712 CDS 1988044:1989246 + A499 B175 C44 9.92 1.15 Putative monofunctional lysine-ketoglutarate reductase 2844 666
THC0290_N_1161 Rfp78 indep 1995370:1995588 + A1768 B546 C143 12.17 -1.87 new transcription segment 2856 3686
THC0290_N_1167 intra 2006194:2006263 + A1779 B546 C143 13.91 1.82 new transcription segment 2871 3820
THC0290_N_1172 5prime 2010199:2010299 + A1699 B546 C143 9.55 -3.59 new transcription segment 2877 3111
THC0290_1724 CDS 2010300:2011496 + A1471 B507 C142 8.13 -1.15 Two-component system sensor histidine kinase 2878 2665
THC0290_1732 CDS 2019534:2020664 - A1176 B404 C122 10.55 1.54 Probable sugar O-acetyltransferase precursor 2889 2212
THC0290_1733 CDS 2020669:2022090 - A1176 B404 C122 11.32 1.80 Probable sugar O-acetyltransferase 2890 2213
THC0290_1738 ccsBA CDS 2024882:2028007 - A1511 B519 C143 11.80 1.29 Probable cytochrome c-type biogenesis protein CcsBA 2898 2734
THC0290_N_1179 intra 2030982:2031255 + A313 B119 C33 7.39 -2.39 new transcription segment 2903 398
THC0290_N_1183 5prime 2036082:2036168 - A1768 B546 C143 9.91 -2.07 new transcription segment 2912 3606
THC0290_1751 tpiA CDS 2038567:2039319 + A828 B250 C68 12.62 1.09 Triose-phosphate isomerase 2916 1735
THC0290_N_1186 3prime-PT 2039369:2039848 + A830 B251 C68 7.90 2.89 new transcription segment 2919 1737
THC0290_1757 CDS 2042828:2043898 - A1260 B422 C125 14.06 3.08 Probable secreted exopolyphosphatase precursor 2929 2391
THC0290_tRNA_0037 tRNA 2049271:2049353 + A1769 B546 C143 11.52 -2.25 transfer RNA-Leu 2944 3756
THC0290_1769 crtB CDS 2053302:2054141 + A1763 B546 C143 11.41 -1.18 Phytoene synthase 2949 3447
THC0290_N_1197 repeated_region 2054587:2054964 - A1248 B419 C125 12.32 2.47 new transcription segment 2951 2354
THC0290_1771 CDS 2054965:2055501 - A1240 B419 C125 13.27 1.82 Probable lipoprotein precursor 2952 2314
THC0290_1773 CDS 2056140:2056589 - A1392 B478 C139 12.82 -3.50 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 2954 2565
THC0290_1774 CDS 2056576:2057085 - A1392 B478 C139 13.36 -4.06 RNA polymerase ECF-type sigma factor 2955 2566
THC0290_1779 bluB/cobT CDS 2061863:2063539 - A314 B119 C33 7.68 -2.07 Bifunctional protein : cob(II)yrinic acid a,c-diamide reductase and nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2962 399
THC0290_1786 CDS 2068911:2069726 + A1795 B549 C143 15.32 1.59 Probable transmembrane protein of unknown function 2972 3869
THC0290_1797 CDS 2082392:2083183 - A1088 B365 C107 7.08 -5.66 Protein of unknown function precursor 2992 2090
THC0290_1804 CDS 2088365:2088802 - A1088 B365 C107 10.59 -3.45 Thioredoxin family protein 2999 2081
THC0290_1808 fecA CDS 2092716:2095151 + A483 B172 C44 6.77 -2.30 ABC-type iron(III) dicitrate-transport system component, TonB-dependent outer membrane receptor FecA precursor 3004 637
THC0290_N_1213 Rfp81 indep 2096135:2096322 - A1495 B512 C143 11.38 -1.23 new transcription segment 3009 2710
THC0290_N_1214 3prime 2096579:2096690 - A1496 B512 C143 13.15 -5.20 new transcription segment 3011 2713
THC0290_1814 CDS 2097857:2099929 - A1088 B365 C107 11.38 -2.04 Probable TonB-dependent outer membrane receptor precursor 3014 2082
THC0290_1815 CDS 2100027:2100941 + A1088 B365 C107 12.55 -3.65 Protein of unknown function precursor 3015 2080
THC0290_N_1217 5prime 2103281:2103429 + A1768 B546 C143 13.34 -4.22 new transcription segment 3020 3624
THC0290_1818 CDS 2103430:2107788 + A1762 B546 C143 11.06 -3.58 Protein of unknown function precursor, putative adhesin 3021 3404
THC0290_1821 CDS 2111809:2112582 + A1264 B422 C125 9.13 2.62 Probable transmembrane protein of unknown function 3025 2397
THC0290_1823 CDS 2112958:2113902 - A929 B290 C79 10.26 1.51 Probable ABC-type transport system, ATPase component 3027 1865
THC0290_1828 htpG CDS 2117483:2119381 + A840 B254 C69 13.96 2.77 Chaperone protein HtpG 3033 1756
THC0290_1836 CDS 2130208:2130960 - A1768 B546 C143 11.90 -2.56 Two-component system response regulatory protein, LytTR family 3042 3615
THC0290_1837 CDS 2137480:2138157 - A1244 B419 C125 12.68 2.78 Protein of unknown function precursor 3051 2341
THC0290_1838 CDS 2138241:2139329 + A399 B152 C42 11.17 2.15 Probable M42 family peptidase 3052 509
THC0290_1841 phoH CDS 2141811:2142761 - A1044 B344 C102 12.79 -1.54 Phosphate starvation-inducible protein PhoH 3061 2009
THC0290_1845 CDS 2145173:2145358 + A345 B129 C35 9.92 -1.95 Hypothetical protein 3069 445
THC0290_N_1237 5prime 2148972:2149021 + A340 B127 C35 11.40 -1.83 new transcription segment 3074 440
THC0290_1861 CDS 2160829:2161941 + A1708 B546 C143 11.36 -1.58 Protein of unknown function 3096 3130
THC0290_1863 CDS 2162962:2163354 + A266 B95 C28 10.83 -1.29 Protein of unknown function 3099 349
THC0290_N_1254 5prime 2168680:2168760 - A1769 B546 C143 13.70 -4.00 new transcription segment 3110 3753
THC0290_N_1256 5prime 2172257:2172324 + A1243 B419 C125 14.69 2.86 new transcription segment 3113 2331
THC0290_1870 CDS 2172325:2172963 + A1243 B419 C125 14.66 3.13 Protein of unknown function precursor 3114 2330
THC0290_1875 CDS 2180153:2181415 - A1806 B554 C144 9.15 1.69 Protein of unknown function precursor 3124 3893
THC0290_tRNA_0040 tRNA 2181579:2181656 + A1769 B546 C143 14.41 -1.89 transfer RNA-Pro 3125 3755
THC0290_1878 CDS 2185807:2186148 + A344 B128 C35 9.02 -2.16 Conserved membrane protein of unknown function 3128 444
THC0290_1880 CDS 2186995:2187318 + A889 B276 C76 11.03 -2.00 Probable transmembrane protein of unknown function. Putative septum formation initiator 3132 1816
THC0290_N_1267 intra 2194492:2194590 - A339 B127 C35 11.62 -1.58 new transcription segment 3144 439
THC0290_N_1272 5prime 2202131:2202187 - A1707 B546 C143 12.01 -2.18 new transcription segment 3156 3128
THC0290_1905 CDS 2215006:2215296 + A1614 B535 C143 12.66 -1.60 Protein of unknown function 3175 2913
THC0290_1907 CDS 2215808:2217370 + A416 B158 C44 11.64 1.79 Probable HD superfamily hydrolase 3180 531
THC0290_1908 mutL CDS 2217523:2219364 + A1507 B518 C143 11.15 1.16 DNA mismatch repair protein MutL 3181 2725
THC0290_1910 CDS 2220154:2221044 + A170 B63 C19 9.47 1.61 Rhomboid family protein 3183 211
THC0290_N_1286 intra 2222209:2222414 + A913 B283 C77 8.91 -2.26 new transcription segment 3186 1846
THC0290_1913 CDS 2222771:2223451 - A1768 B546 C143 14.51 -2.33 Probable transcriptional regulatory protein, Crp/Fnr family 3190 3678
THC0290_1918 ccoQ CDS 2229496:2229687 + A700 B199 C52 6.08 -3.44 Cytochrome c oxidase, cbb3-type, subunit IV 3198 1519
THC0290_N_1300 5prime 2252602:2252830 - A1603 B535 C143 13.78 -2.90 new transcription segment 3217 2885
THC0290_1937 rpoB CDS 2260175:2263987 - A599 B183 C44 11.81 1.24 DNA-directed RNA polymerase beta subunit RpoB 3227 1005
THC0290_1940 rplA CDS 2265191:2265880 - A638 B183 C44 13.63 1.11 50S ribosomal protein L1 3232 1386
THC0290_1945 CDS 2269088:2269390 - A1762 B546 C143 14.87 -1.61 Protein of unknown function 3247 3402
THC0290_1948 CDS 2270822:2271991 - A401 B152 C42 12.50 1.48 Acyl-CoA dehydrogenase family protein 3253 515
THC0290_1950 CDS 2272914:2273141 - A1762 B546 C143 12.96 -2.05 Hypothetical protein 3255 3419
THC0290_N_1318 5prime 2273142:2273206 - A1768 B546 C143 14.46 -2.20 new transcription segment 3256 3660
THC0290_1961 hemL CDS 2289025:2290311 - A1270 B425 C125 12.76 1.87 Glutamate-1-semialdehyde aminotransferase 3277 2403
THC0290_1962 CDS 2290380:2291243 - A1271 B425 C125 12.85 1.39 Putative muramidase precursor 3279 2406
THC0290_N_1331 3prime-PT 2295401:2295816 - A1644 B540 C143 7.83 5.71 new transcription segment 3287 2991
THC0290_1968 CDS 2295865:2296506 - A1768 B546 C143 14.22 -1.71 Protein of unknown function 3288 3712
THC0290_N_1334 5prime 2296507:2296565 - A1768 B546 C143 13.75 -2.68 new transcription segment 3290 3713
THC0290_1971 CDS 2298569:2299102 - A1564 B526 C143 9.47 -1.15 Probable ribosomal-protein-amino-adic N-acetyltransferase 3293 2830
THC0290_1972 dapF CDS 2299113:2299883 - A1564 B526 C143 11.21 -2.11 Diaminopimelate epimerase 3294 2832
THC0290_N_1335 5prime 2299884:2300001 - A1707 B546 C143 11.99 -5.96 new transcription segment 3295 3129
THC0290_1975 CDS 2303364:2304590 - A1753 B546 C143 12.01 1.53 Protein of unknown function 3302 3346
THC0290_N_1339 5prime 2304591:2304827 - A1768 B546 C143 10.83 -2.90 new transcription segment 3303 3622
THC0290_1984 CDS 2311541:2311834 + A1768 B546 C143 13.43 -3.49 Protein of unknown function 3316 3619
THC0290_1985 CDS 2311840:2312199 + A1768 B546 C143 12.51 -2.72 Probable transcriptional regulator, XRE family 3317 3620
THC0290_1989 CDS 2314906:2315157 - A1747 B546 C143 11.81 -2.06 Hypothetical protein 3323 3253
THC0290_2009 CDS 2335155:2336702 - A581 B183 C44 6.27 -3.25 Glycosyl transferase, group 2 family protein 3348 897
THC0290_N_1353 5prime 2355807:2355860 - A1767 B546 C143 9.75 -2.92 new transcription segment 3369 3570
THC0290_2030 CDS 2357857:2358465 + A1088 B365 C107 6.37 -4.84 Hypothetical lipoprotein precursor 3373 2107
THC0290_2036 CDS 2365831:2366970 - A137 B54 C18 9.37 2.14 Probable aminotransferase 3383 174
THC0290_2037 CDS 2367007:2367957 - A137 B54 C18 10.90 1.20 Probable glycosyl transferase, group 4 family protein 3385 175
THC0290_2058 CDS 2391615:2391980 - A1768 B546 C143 12.22 -1.38 Protein of unknown function 3413 3591
THC0290_2068 rpoA CDS 2400410:2401402 - A599 B183 C44 12.57 1.79 DNA-directed RNA polymerase alpha subunit RpoA 3432 1016
THC0290_N_1378 intra 2402033:2402123 - A599 B183 C44 13.25 1.42 new transcription segment 3434 1015
THC0290_2070 rpsK CDS 2402124:2402507 - A599 B183 C44 13.56 1.58 30S ribosomal protein S11 3435 1011
THC0290_2073 infA CDS 2403013:2403228 - A599 B183 C44 13.16 1.25 Translation initiation factor IF-1 3438 1013
THC0290_2074 secY CDS 2403230:2404573 - A599 B183 C44 13.52 1.57 Preprotein translocase SecY subunit 3439 1014
THC0290_2076 rpmD CDS 2405050:2405232 - A599 B183 C44 13.90 1.33 50S ribosomal protein L30 3441 1022
THC0290_2077 rpsE CDS 2405245:2405769 - A599 B183 C44 13.96 1.40 30S ribosomal protein S5 3442 1032
THC0290_2084 rplN CDS 2408390:2408758 - A599 B183 C44 13.78 1.32 50S ribosomal protein L14 3450 1042
THC0290_2088 rpsC CDS 2409688:2410449 - A599 B183 C44 14.39 1.37 30S ribosomal protein S3 3454 1041
THC0290_2090 rpsS CDS 2410871:2411149 - A599 B183 C44 13.55 1.39 30S ribosomal protein S19 3456 1040
THC0290_2091 rplB CDS 2411156:2411980 - A599 B183 C44 13.62 1.16 50S ribosomal protein L2 3457 1038
THC0290_2093 rplD CDS 2412287:2412916 - A599 B183 C44 13.41 1.27 50S ribosomal protein L4 3459 1034
THC0290_N_1380 intra 2413572:2413639 - A646 B183 C44 5.43 3.16 new transcription segment 3461 1407
THC0290_2096 fusA CDS 2413957:2416113 - A599 B183 C44 13.14 1.67 Elongation factor G (EF-G) 3463 1037
THC0290_N_1383 intra 2419137:2419200 + A169 B62 C19 6.58 4.38 new transcription segment 3469 210
THC0290_N_1398 3prime 2443579:2443958 - A1644 B540 C143 8.85 4.08 new transcription segment 3507 2992
THC0290_2122 CDS 2444507:2445007 - A1768 B546 C143 13.04 -1.29 Uncharacterized phage-associated protein 3510 3581
THC0290_2125 CDS 2446389:2446838 + A1849 B569 C149 7.70 1.79 Protein of unknown function 3513 3947
THC0290_N_1401 3prime 2446839:2447017 + A1307 B446 C130 5.83 -3.25 new transcription segment 3516 2449
THC0290_2137 CDS 2459716:2460825 - A547 B181 C44 9.58 1.51 Conserved protein of unknown function 3533 788
THC0290_N_1409 5prime 2463867:2464068 - A314 B119 C33 10.81 -1.48 new transcription segment 3538 400
THC0290_2143 pdhA CDS 2466519:2467517 - A603 B183 C44 12.67 1.13 Pyruvate dehydrogenase E1 component, alpha subunit 3543 1210
THC0290_N_1414 5prime 2473389:2473464 + A1749 B546 C143 14.97 -1.54 new transcription segment 3549 3324
THC0290_N_1416 3prime 2475219:2475302 + A1677 B543 C143 5.50 3.27 new transcription segment 3552 3080
THC0290_2156 CDS 2490693:2491313 + A1086 B365 C107 10.63 -5.30 Protein of unknown function precursor 3572 2077
THC0290_N_1422 intra 2491842:2492026 + A483 B172 C44 8.68 -4.58 new transcription segment 3574 641
THC0290_N_1423 3prime 2495249:2495787 + A1086 B365 C107 7.91 -3.80 new transcription segment 3576 2078
THC0290_2159 CDS 2495709:2497403 - A674 B189 C46 13.22 2.63 Protein of unknown function precursor 3579 1451
THC0290_2160 CDS 2497412:2498320 - A622 B183 C44 11.14 1.94 Putative ABC-type phosphate-transport system, binding lipoprotein precursor component 3580 1333
THC0290_2162 tonB CDS 2498547:2499365 - A399 B152 C42 14.10 2.29 Protein TonB 3582 512
THC0290_2163 exbD2 CDS 2499397:2499939 - A399 B152 C42 13.76 3.02 Biopolymer transport ExbD2 protein 3583 513
THC0290_2164 exbD1 CDS 2499959:2500573 - A399 B152 C42 14.37 2.04 Biopolymer transport ExbD1 protein 3584 511
THC0290_2165 exbB CDS 2500639:2501457 - A398 B152 C42 13.95 2.05 Biopolymer transport ExbB protein 3586 508
THC0290_N_1427 5prime 2501458:2501514 - A395 B151 C42 10.44 3.50 new transcription segment 3587 505
THC0290_2174 nuoN CDS 2512490:2513857 - A601 B183 C44 8.01 2.75 NADH dehydrogenase I, N subunit 3601 1184
THC0290_2187 nuoB CDS 2525721:2526266 - A601 B183 C44 10.58 1.55 NADH dehydrogenase I, B subunit 3616 1202
THC0290_N_1445 repeated_region 2542745:2542795 - A1768 B546 C143 12.23 -1.82 new transcription segment 3634 3706
THC0290_N_1451 5prime 2546978:2547101 - A1768 B546 C143 10.98 -1.56 new transcription segment 3643 3655
THC0290_N_1454 5prime 2552315:2552427 + A1431 B497 C142 12.57 -2.13 new transcription segment 3649 2614
THC0290_2218 CDS 2573290:2573838 - A1260 B422 C125 9.98 2.51 Protein of unknown function 3672 2392
THC0290_2219 CDS 2573888:2574520 - A1260 B422 C125 11.60 2.26 Protein of unknown function precursor 3673 2393
THC0290_2232 CDS 2584976:2585599 - A316 B119 C33 10.62 -1.48 Protein of unknown function 3687 402
THC0290_2238 darA CDS 2589117:2590019 - A590 B183 C44 8.32 -1.79 Dialkylrecorsinol condensing enzyme DarA 3693 936
THC0290_2241 CDS 2592743:2592994 - A276 B101 C28 11.27 -1.33 Protein of unknown function 3698 359
THC0290_2254 CDS 2607529:2608683 - A600 B183 C44 7.83 2.06 3-oxoacyl-(acyl-carrier-protein) synthase 3719 1081
THC0290_N_1476 intra 2610053:2610125 - A611 B183 C44 5.95 4.00 new transcription segment 3723 1292
THC0290_2260 CDS 2613191:2615368 + A1778 B546 C143 13.93 1.58 Probable S41A family C-terminal processing peptidase precursor 3728 3808
THC0290_2262 CDS 2617523:2618095 - A1244 B419 C125 14.40 2.46 Thioredoxin family protein precursor 3731 2348
THC0290_N_1482 intra 2618096:2618154 - A1230 B419 C125 14.26 2.37 new transcription segment 3734 2303
THC0290_2263 CDS 2618155:2618613 - A1244 B419 C125 14.44 2.52 Thioredoxin family protein 3735 2346
THC0290_2264 CDS 2618659:2620143 - A539 B180 C44 8.91 1.25 Probable proton-dependent di-tripeptide transporter 3736 740
THC0290_N_1484 intra 2624481:2624662 + A1768 B546 C143 12.45 -2.72 new transcription segment 3741 3632
THC0290_2269 CDS 2625984:2626895 + A591 B183 C44 8.22 -1.66 Protein of unknown function 3743 938
THC0290_2270 CDS 2627503:2627874 - A1768 B546 C143 9.94 -2.43 Protein of unknown function (fragment) 3745 3617
THC0290_N_1486 3prime 2628227:2629200 - A1614 B535 C143 9.12 -1.85 new transcription segment 3747 2907
THC0290_N_1490 3prime 2636183:2636448 + A194 B70 C21 7.39 2.46 new transcription segment 3758 240
THC0290_2279 CDS 2636195:2636971 - A1762 B546 C143 10.97 -1.39 Probable membrane-associated esterase 3759 3422
THC0290_N_1491 5prime 2637551:2637616 - A1768 B546 C143 11.09 -3.07 new transcription segment 3761 3663
THC0290_2281 CDS 2637645:2638259 + A1294 B437 C127 10.64 -1.56 Protein of unknown function 3762 2436
THC0290_N_1495 intra 2640263:2640315 - A1367 B470 C136 9.41 1.74 new transcription segment 3769 2534
THC0290_N_1498 3prime 2647134:2647823 + A1296 B439 C127 10.80 1.54 new transcription segment 3779 2438
THC0290_2292 greA CDS 2647931:2648407 + A512 B179 C44 10.61 1.27 Transcription elongation factor GreA 3782 683
THC0290_2293 CDS 2648410:2648799 + A512 B179 C44 10.55 2.57 HIT family protein 3783 684
THC0290_2296 CDS 2652224:2654422 - A730 B209 C54 10.97 1.22 Probable TonB-dependent outer membrane receptor precursor 3788 1596
THC0290_miscRNA_0050 misc_RNA 2654507:2654611 - A1728 B546 C143 12.19 -1.20 TPP riboswitch [THI element] 3790 3191
THC0290_2298 CDS 2655534:2656004 - A528 B180 C44 10.39 -1.81 Probable transcriptional regulator, AsnC family 3794 715
THC0290_2305 fabH3 CDS 2662409:2663410 - A600 B183 C44 10.69 1.74 3-oxoacyl-[acyl-carrier-protein] synthase III protein FabH3 3806 1078
THC0290_2309 ribE CDS 2665529:2666125 + A1475 B507 C142 11.71 -1.30 Riboflavin synthase, alpha subunit 3812 2674
THC0290_2310 CDS 2666206:2667102 - A371 B141 C39 13.31 -2.79 Protein of unknown function precursor 3814 473
THC0290_N_1517 3prime 2672008:2672485 + A1779 B546 C143 11.31 1.59 new transcription segment 3824 3823
THC0290_N_1518 3prime 2672322:2672406 - A620 B183 C44 6.80 5.38 new transcription segment 3825 1329
THC0290_N_1519 intra 2675960:2676041 - A1708 B546 C143 14.42 -2.63 new transcription segment 3829 3132
THC0290_2320 sufA CDS 2676042:2676371 - A1708 B546 C143 14.62 -2.47 Scaffold protein for Fe-S assembly, SufA 3830 3131
THC0290_N_1520 5prime 2676372:2676436 - A1709 B546 C143 14.65 -3.41 new transcription segment 3831 3141
THC0290_tRNA_0048 tRNA 2682256:2682332 + A1769 B546 C143 12.66 -2.18 transfer RNA-Ala 3840 3750
THC0290_2330 CDS 2689263:2690237 + A591 B183 C44 8.86 -1.24 Polyprenyl synthetase 3848 939
THC0290_N_1528 3prime 2689772:2690654 - A1779 B546 C143 10.99 2.22 new transcription segment 3849 3814
THC0290_N_1529 intra 2690238:2690304 + A630 B183 C44 5.11 1.89 new transcription segment 3850 1360
THC0290_N_1536 3prime 2707558:2707724 - A1820 B557 C145 6.74 4.88 new transcription segment 3867 3911
THC0290_N_1545 intra 2719651:2720126 - A1397 B479 C139 9.76 -2.90 new transcription segment 3886 2571
THC0290_2358 CDS 2728448:2729662 - A545 B180 C44 10.60 1.89 Protein of unknown function precursor, putative outer membrane protein 3896 780
THC0290_2359 CDS 2729659:2730384 - A1768 B546 C143 11.76 -2.47 Putative transcriptional regulator 3897 3640
THC0290_2360 CDS 2730709:2731023 - A1762 B546 C143 11.04 -1.54 Hypothetical protein 3901 3428
THC0290_N_1556 5prime 2739080:2739176 - A1768 B546 C143 12.85 -4.23 new transcription segment 3913 3607
THC0290_2368 CDS 2739671:2740099 - A1202 B413 C124 10.55 1.33 Protein of unknown function 3915 2256
THC0290_N_1560 5prime 2742298:2742400 - A1768 B546 C143 12.43 -1.85 new transcription segment 3921 3614
THC0290_2372 CDS 2742778:2743410 - A627 B183 C44 9.89 1.50 Hypothetical transmembrane protein 3923 1349
THC0290_2373 CDS 2743570:2744604 - A627 B183 C44 10.47 1.29 RelA/SpoT domain protein 3925 1350
THC0290_N_1564 intra 2745711:2745767 - A338 B126 C35 10.96 -1.20 new transcription segment 3928 438
THC0290_2378 gene 2750023:2750625 - A1490 B510 C143 10.41 -2.15 Truncated TonB-dependent outer membrane receptor 3935 2697
THC0290_N_1567 5prime 2750626:2750789 - A1490 B510 C143 10.21 -2.69 new transcription segment 3936 2698
THC0290_N_1568 5prime 2750790:2750873 - A1490 B510 C143 8.19 -4.50 new transcription segment 3937 2695
THC0290_2380 atpA CDS 2752261:2753838 - A646 B183 C44 12.00 1.67 ATP synthase alpha subunit 3941 1416
THC0290_2381 atpH CDS 2753853:2754386 - A646 B183 C44 11.55 1.73 ATP synthase delta subunit 3942 1411
THC0290_N_1572 3prime 2758040:2758319 + A1795 B549 C143 10.87 -1.74 new transcription segment 3949 3863
THC0290_N_1573 Rfp87 indep 2762770:2763055 - A1768 B546 C143 12.18 -2.07 new transcription segment 3954 3595
THC0290_2398 wcaJ CDS 2770509:2771867 - A580 B183 C44 8.93 -1.49 Putative colanic biosynthesis UDP-glucose lipid carrier transferase 3968 878
THC0290_2400 rmlD CDS 2772860:2773714 - A581 B183 C44 10.31 -1.22 dTDP-4-dehydrorhamnose reductase 3970 899
THC0290_2403 CDS 2775995:2776870 - A581 B183 C44 7.74 -2.50 Protein of unknown function 3973 900
THC0290_2405 CDS 2778394:2778873 - A1432 B497 C142 10.74 -2.32 Probable transmembrane protein of unknown function 3975 2616