Differential expression: Peroxide stress [HP.vs.Ctrl]

Differentially expressed genes after 10 min exposure to 100 µM hydrogen peroxide relative to unstressed condition (OD600nm=0.8, TYES at 18°C 200 rpm).

List of differentially expressed genomic elements (CDS and newly identified RNA elements).
Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.

Reference samples: CS1_a, CS1_b
Test samples: HP_a, HP_b

Locus Tag Name (v2) Feature type Location Clusters Base Expr. Delta Expr. Annotation Chromosome order Clusters order
THC0290_N_0008 3prime-PT 8228:8499 + A1768 B546 C143 6.70 2.08 new transcription segment 15 3687
THC0290_0015 CDS 18295:18858 + A600 B183 C44 12.05 -1.44 Probable outer membrane lipoprotein precursor, OmpH family 27 1054
THC0290_N_0020 5prime 25333:25398 + A1254 B420 C125 4.80 -1.30 new transcription segment 39 2378
THC0290_N_0023 3prime 32460:32570 + A1747 B546 C143 6.22 1.28 new transcription segment 46 3264
THC0290_0029 elaA CDS 47729:48178 + A1768 B546 C143 9.50 1.10 ElaA protein 55 3677
THC0290_N_0028 3prime 48179:48337 + A1817 B557 C145 8.10 1.15 new transcription segment 57 3908
THC0290_N_0029 Rfp3 indep 49141:49425 + A1768 B546 C143 8.51 1.06 new transcription segment 58 3650
THC0290_N_0030 5prime 49569:49619 + A1713 B546 C143 10.55 1.71 new transcription segment 59 3152
THC0290_0031 yceA CDS 49620:50978 + A1713 B546 C143 11.68 2.04 Protein of unknown function YceA 60 3151
THC0290_N_0031 5prime 51080:51148 + A1543 B522 C143 8.40 1.57 new transcription segment 61 2786
THC0290_N_0047 3prime 81395:81474 - A941 B297 C82 8.33 1.46 new transcription segment 106 1880
THC0290_N_0067 intra 110638:110698 - A643 B183 C44 6.71 -1.14 new transcription segment 152 1398
THC0290_0087 CDS 112762:113097 - A1654 B542 C143 8.42 1.12 Probable single-stranded DNA-binding protein 154 3023
THC0290_N_0076 5prime 131417:131569 + A205 B75 C24 12.30 -1.41 new transcription segment 177 256
THC0290_0102 CDS 131570:132853 + A204 B75 C24 13.28 -1.48 Protein of unknown function 178 252
THC0290_N_0077 intra 132854:133118 + A205 B75 C24 12.55 -1.21 new transcription segment 179 257
THC0290_0103 CDS 133119:133640 + A204 B75 C24 13.36 -1.28 Protein of unknown function precursor 180 254
THC0290_0104 CDS 133660:134139 + A204 B75 C24 13.79 -1.13 Probable lipoprotein precursor 181 255
THC0290_0116 panC CDS 145223:146071 - A605 B183 C44 10.84 -1.40 Pantoate--beta-alanine ligase 195 1248
THC0290_N_0086 intra 156931:157009 + A639 B183 C44 11.40 -1.16 new transcription segment 205 1387
THC0290_0131 CDS 162019:162429 - A598 B183 C44 9.63 -1.30 Protein of unknown function 219 989
THC0290_N_0095 repeated_region 164214:164791 - A676 B189 C46 8.71 1.37 new transcription segment 226 1458
THC0290_N_0102 intra 176973:177041 - A545 B180 C44 12.99 -1.01 new transcription segment 242 771
THC0290_0144 CDS 178131:179366 + A1107 B371 C109 9.66 1.37 Protein of unknown function, putative transcriptional regulator 245 2131
THC0290_N_0130 Rfp14 indep 208381:208488 + A1765 B546 C143 8.21 1.04 new transcription segment 288 3520
THC0290_0184 CDS 232062:233117 - A1083 B365 C107 12.67 1.50 Probable cell surface protein (Leucine-rich repeat protein) precursor 315 2058
THC0290_0185 CDS 233132:234121 - A1088 B365 C107 12.81 2.91 Probable cell surface protein (Leucine-rich repeat protein) precursor 316 2088
THC0290_0186 CDS 234136:235122 - A1088 B365 C107 13.11 1.91 Probable cell surface protein (Leucine-rich repeat protein) precursor 317 2085
THC0290_0187 CDS 235708:236373 + A1765 B546 C143 9.01 1.47 Probable transmembrane protein of unknown function 318 3559
THC0290_N_0147 3prime 244080:244141 + A1670 B542 C143 8.27 1.11 new transcription segment 331 3059
THC0290_N_0150 3prime 245892:245964 + A1588 B533 C143 5.08 1.02 new transcription segment 336 2861
THC0290_N_0155 5prime 251187:251301 - A1768 B546 C143 8.97 1.13 new transcription segment 343 3653
THC0290_0204 rnhA CDS 254545:255024 - A601 B183 C44 8.85 -1.05 Ribonuclease HI 350 1182
THC0290_0205 purN CDS 255026:255595 - A526 B180 C44 9.05 -1.10 Phosphoribosylglycinamide formyltransferase 351 711
THC0290_0208 rnc CDS 257618:258358 + A600 B183 C44 10.28 -1.34 Ribonuclease III 357 1113
THC0290_0211 CDS 260540:261250 - A525 B180 C44 11.38 -1.02 Protein of unknown function 362 707
THC0290_0222 CDS 268913:269659 - A1762 B546 C143 10.93 1.26 Protein of unknown function precursor 379 3403
THC0290_N_0185 5prime 297877:297936 - A1769 B546 C143 9.89 1.40 new transcription segment 412 3751
THC0290_0242 CDS 297963:298367 - A1768 B546 C143 10.28 1.33 Probable lyase 413 3625
THC0290_0243 rbfA CDS 298577:298969 + A1768 B546 C143 11.38 1.36 Ribosome-binding factor A 415 3604
THC0290_N_0189 intra 304144:304193 - A678 B190 C47 8.91 1.38 new transcription segment 425 1469
THC0290_N_0200 3prime 323909:323965 - A141 B55 C18 6.15 -1.46 new transcription segment 452 180
THC0290_0266 CDS 323966:324199 - A1463 B506 C142 7.47 -1.15 Transcriptional regulator, XRE family 454 2657
THC0290_N_0205 5prime 332826:332898 - A1549 B523 C143 10.20 3.55 new transcription segment 465 2794
THC0290_0275 CDS 332899:333825 - A1862 B574 C149 13.06 3.43 Protein of unknown function 466 3961
THC0290_0276 CDS 334046:334363 - A1709 B546 C143 14.56 1.78 Thioredoxin family protein 468 3133
THC0290_N_0214 3prime 351138:351301 + A1655 B542 C143 10.15 -1.96 new transcription segment 492 3025
THC0290_0292 CDS 351317:352102 - A377 B143 C41 13.01 3.29 Protein of unknown function 493 482
THC0290_N_0217 3prime 355417:355516 - A1643 B540 C143 8.92 1.19 new transcription segment 498 2985
THC0290_0300 CDS 361814:364573 - A1062 B352 C104 10.78 -1.95 Probable M36 fungalysin family metalloprotease precursor 505 2029
THC0290_N_0243 5prime 400566:400739 + A1763 B546 C143 9.24 1.15 new transcription segment 554 3445
THC0290_0357 rimM CDS 440423:440947 + A600 B183 C44 11.44 -1.58 16S rRNA processing protein RimM 595 1111
THC0290_N_0262 intra 440948:441076 + A600 B183 C44 10.60 -1.59 new transcription segment 596 1112
THC0290_0358 yfiC CDS 441077:441781 + A600 B183 C44 9.26 -1.77 Protein of unknown function YfiC 597 1057
THC0290_N_0263 3prime-PT 441466:441936 - A1760 B546 C143 8.58 1.85 new transcription segment 598 3375
THC0290_N_0267 5prime 446871:447017 + A1762 B546 C143 10.69 1.52 new transcription segment 607 3396
THC0290_0365 CDS 447018:447473 + A1762 B546 C143 10.40 1.17 Protein of unknown function 608 3385
THC0290_N_0268 intra 447474:447645 + A1762 B546 C143 10.90 1.15 new transcription segment 609 3386
THC0290_N_0269 3prime-PT 448689:448837 - A1795 B549 C143 8.42 4.58 new transcription segment 612 3859
THC0290_N_0271 3prime 448838:448909 - A1795 B549 C143 9.72 5.31 new transcription segment 614 3861
THC0290_N_0272 3prime-PT 448862:449419 + A1351 B467 C136 7.37 -2.63 new transcription segment 615 2509
THC0290_0367 CDS 448910:449260 - A1795 B549 C143 11.84 4.13 Protein of unknown function precursor 616 3860
THC0290_0372 oprP CDS 455757:457094 + A1492 B512 C143 9.41 -1.38 Probable phosphate-selective porin precursor 621 2706
THC0290_0392 CDS 477872:478558 + A1711 B546 C143 9.64 1.62 Protein of unknown function precursor 649 3148
THC0290_N_0282 3prime 478559:479025 + A1711 B546 C143 9.09 1.37 new transcription segment 651 3146
THC0290_N_0298 3prime-PT 500352:500565 - A1760 B546 C143 8.27 1.48 new transcription segment 682 3376
THC0290_0427 CDS 519196:519870 - A1719 B546 C143 9.17 1.13 Probable transcriptional regulator, TetR family 710 3166
THC0290_0429 CDS 521589:522020 + A1509 B519 C143 8.95 1.57 Hypothetical transmembrane protein 712 2728
THC0290_N_0309 3prime 522021:522213 + A1509 B519 C143 9.83 1.75 new transcription segment 713 2729
THC0290_N_0310 3prime-PT 522214:522414 + A771 B233 C66 8.89 1.50 new transcription segment 714 1656
THC0290_0430 CDS 522415:524397 + A1765 B546 C143 10.57 1.27 Cation-transporting ATPase, P-type 715 3539
THC0290_N_0311 intra 524398:524889 + A1765 B546 C143 8.15 1.20 new transcription segment 716 3534
THC0290_0431 thiS CDS 525052:525258 + A730 B209 C54 7.81 1.15 Thiamine biosynthesis protein ThiS 719 1598
THC0290_N_0313 intra 525259:525356 + A730 B209 C54 7.27 1.07 new transcription segment 720 1599
THC0290_N_0335 3prime 563975:564212 - A759 B225 C62 6.26 -1.06 new transcription segment 774 1633
THC0290_0467 CDS 564213:565787 - A522 B180 C44 8.52 -1.01 Probable membrane associated S41A family C-terminal processing peptidase 776 700
THC0290_N_0337 intra 565788:565860 - A310 B116 C33 10.13 -1.12 new transcription segment 777 395
THC0290_0468 CDS 565861:566289 - A432 B164 C44 9.83 -1.31 dCMP deaminase 778 556
THC0290_N_0339 3prime-PT 567081:567646 - A1760 B546 C143 6.52 1.75 new transcription segment 782 3374
THC0290_N_0343 5prime 568633:568691 + A962 B306 C84 5.63 -1.86 new transcription segment 786 1904
THC0290_0473 nusA CDS 569172:570413 + A639 B183 C44 12.85 -1.02 Transcription elongation protein NusA 788 1390
THC0290_N_0344 intra 570414:570466 + A639 B183 C44 13.85 -1.20 new transcription segment 789 1391
THC0290_0482 CDS 586087:587670 + A1765 B546 C143 8.39 1.53 Transposase IS1182 family 809 3526
THC0290_0485 CDS 589753:591324 + A1765 B546 C143 8.47 1.28 Transposase IS1182 family 815 3527
THC0290_0502 CDS 608390:609994 + A1765 B546 C143 8.21 1.59 Transposase IS1182 family 839 3528
THC0290_N_0363 repeated_region 609996:610101 - A1765 B546 C143 10.50 1.01 new transcription segment 840 3535
THC0290_0503 CDS 610102:610602 - A1765 B546 C143 9.76 1.32 Protein of unknown function precursor 841 3544
THC0290_N_0364 5prime 610603:610665 - A1764 B546 C143 10.34 1.02 new transcription segment 842 3452
THC0290_0504 CDS 611442:612659 + A1765 B546 C143 8.79 1.15 Probable transposase 843 3543
THC0290_0525 CDS 640567:641241 - A1765 B546 C143 11.40 1.12 Hypothetical protein 876 3554
THC0290_0526 CDS 642217:643776 + A1765 B546 C143 8.16 1.63 Transposase IS1182 family 878 3529
THC0290_N_0396 intra 668261:668748 - A1765 B546 C143 7.39 1.40 new transcription segment 921 3545
THC0290_0550 CDS 668749:669369 - A1765 B546 C143 9.64 1.62 Protein of unknown function 922 3546
THC0290_N_0398 5prime 673140:674020 - A1765 B546 C143 9.44 1.10 new transcription segment 925 3547
THC0290_0570 CDS 694331:695638 - A1206 B415 C124 11.60 1.49 Protein of unknown function 956 2262
THC0290_0578 CDS 703366:704418 - A600 B183 C44 11.25 -1.06 Site-specific DNA-methyltransferase (adenine-specific) 972 1083
THC0290_N_0426 3prime-PT 710623:710986 - A1037 B342 C102 6.55 1.14 new transcription segment 985 1997
THC0290_tRNA_0012 tRNA 710904:710976 + A1769 B546 C143 11.60 1.23 transfer RNA-Gly 987 3777
THC0290_0590 CDS 718261:719187 + A576 B183 C44 7.28 -1.12 Putative 4Fe-4S binding protein 996 854
THC0290_0597 deoC CDS 731804:732547 + A600 B183 C44 10.17 -1.04 Deoxyribose-phosphate aldolase 1008 1051
THC0290_N_0444 3prime 745438:745510 - A1762 B546 C143 14.20 1.47 new transcription segment 1028 3393
THC0290_0611 CDS 745511:745864 - A1762 B546 C143 12.77 1.31 Protein of unknown function 1029 3392
THC0290_0615 CDS 750566:751084 + A1407 B485 C140 11.29 1.22 Carbonic anhydrase/acetyltransferase family protein 1036 2581
THC0290_0619 bamA CDS 753852:756521 - A545 B180 C44 11.31 -1.33 Outer membrane protein assembly complex precursor, BamA 1043 779
THC0290_0620 uppS CDS 756505:757245 - A1353 B467 C136 10.08 -1.64 Di-trans,poly-cis-decaprenylcistransferase 1044 2511
THC0290_0621 CDS 757252:757935 - A1353 B467 C136 9.98 -1.19 Protein of unknown function precursor, putative outer membrane protein 1045 2512
THC0290_N_0465 intra 770297:771152 + A1715 B546 C143 7.09 1.53 new transcription segment 1075 3159
THC0290_N_0469 intra 780456:780505 - A594 B183 C44 6.11 -1.29 new transcription segment 1088 950
THC0290_N_0487 3prime 804893:804980 - A942 B298 C82 5.58 1.06 new transcription segment 1131 1881
THC0290_0670 CDS 807710:809137 - A1762 B546 C143 9.70 1.05 Probable nucleoside-diphosphate-sugar epimerase 1135 3400
THC0290_0679 CDS 816190:816630 + A85 B40 C15 7.31 1.01 Probable transmembrane protein of unknown function 1145 101
THC0290_0680 CDS 816720:817085 + A1768 B546 C143 9.32 1.44 Protein of unknown function 1146 3721
THC0290_N_0517 3prime 845017:845453 + A1643 B540 C143 7.36 2.04 new transcription segment 1193 2986
THC0290_0710 ribH CDS 846778:847347 - A600 B183 C44 11.78 -1.01 Riboflavin synthase, beta subunit 1198 1103
THC0290_N_0521 intra 847348:847417 - A454 B168 C44 10.47 -1.66 new transcription segment 1199 589
THC0290_0711 CDS 847418:848209 - A600 B183 C44 12.78 -1.71 Protein of unknown function 1200 1104
THC0290_0718 CDS 855109:855891 + A557 B183 C44 9.17 -1.03 Probable ABC-type iron(III)-transport system, ATPase component 1209 813
THC0290_0726 rpmH CDS 863440:863601 - A1457 B505 C142 11.77 -1.49 50S ribosomal protein L34 1221 2650
THC0290_N_0528 5prime 863602:863656 - A1457 B505 C142 10.59 -1.47 new transcription segment 1222 2651
THC0290_0738 topA CDS 875152:877668 + A544 B180 C44 10.52 -1.25 DNA topoisomerase I 1242 768
THC0290_N_0545 3prime 887358:887776 + A574 B183 C44 6.57 -1.02 new transcription segment 1258 850
THC0290_0750 CDS 891604:892050 - A801 B244 C67 11.08 -1.64 Probable DnaJ-class molecular chaperone 1266 1692
THC0290_N_0550 5prime 892051:892112 - A801 B244 C67 11.71 -1.84 new transcription segment 1267 1693
THC0290_N_0561 3prime 908145:908243 - A281 B102 C28 6.81 1.00 new transcription segment 1293 364
THC0290_N_0568 5prime 917638:917940 + A1707 B546 C143 11.40 1.00 new transcription segment 1310 3127
THC0290_0774 CDS 922230:925658 - A1772 B546 C143 8.64 -1.59 Methylmalonyl-CoA mutase 1316 3796
THC0290_0788 CDS 938186:938767 + A1795 B549 C143 11.06 2.36 Protein of unknown function precursor 1337 3853
THC0290_N_0578 intra 938768:938895 + A1765 B546 C143 7.89 1.98 new transcription segment 1338 3482
THC0290_0797 pepT CDS 950970:952244 - A525 B180 C44 11.18 -1.46 Tripeptide aminopeptidase 1355 705
THC0290_0814 CDS 969702:970469 - A1231 B419 C125 10.34 1.30 Protein of unknown function precursor 1385 2304
THC0290_0815 oxaA CDS 970617:972518 - A800 B244 C67 11.60 -1.20 Inner membrane protein OxaA 1386 1690
THC0290_0816 pyrG CDS 972612:974225 - A800 B244 C67 11.59 -1.22 CTP synthase 1388 1691
THC0290_0820 CDS 977782:979488 - A749 B218 C58 9.72 -1.03 Protein of unknown function 1395 1623
THC0290_0832 dcp2 CDS 990238:992370 - A1796 B549 C143 10.23 1.27 Peptidyl-dipeptidase precursor Dcp2 1410 3876
THC0290_0836 icd CDS 994825:996051 + A257 B91 C27 14.57 1.14 Isocitrate dehydrogenase (NADP+) 1419 338
THC0290_N_0615 3prime-PT 996138:998041 + A1535 B521 C143 7.75 1.81 new transcription segment 1420 2776
THC0290_0842 relA CDS 1001835:1004054 + A1564 B526 C143 12.41 1.30 GTP diphosphokinase 1428 2831
THC0290_N_0617 3prime 1004055:1004461 + A1178 B404 C122 7.45 1.78 new transcription segment 1429 2215
THC0290_0849 CDS 1009303:1009518 - A501 B175 C44 6.26 -1.35 Hypothetical transmembrane protein 1437 669
THC0290_0850 yjeB CDS 1009520:1009939 - A894 B277 C76 6.73 -1.14 Protein of unknown function YjeB 1438 1822
THC0290_0852 nadC CDS 1011355:1012212 + A525 B180 C44 10.29 -1.03 Nicotinate-nucleotide diphosphorylase (carboxylating) 1441 708
THC0290_N_0621 3prime 1016422:1016591 - A1765 B546 C143 11.57 1.64 new transcription segment 1446 3553
THC0290_0880 coaE CDS 1037592:1038176 + A1765 B546 C143 10.14 1.08 Dephospho-CoA kinase 1480 3560
THC0290_N_0633 intra 1038177:1038243 + A1765 B546 C143 8.21 1.37 new transcription segment 1481 3561
THC0290_0881 rprX CDS 1038245:1039828 + A1765 B546 C143 10.24 1.57 Two-component system sensor histidine kinase RprX 1482 3521
THC0290_0894 (yfcA) CDS 1053252:1054037 + A1753 B546 C143 10.50 1.03 Probable transmembrane protein of unknown function 1504 3347
THC0290_0939 rlmF CDS 1106178:1107122 - A106 B45 C16 9.31 -1.12 Ribosomal RNA large subunit methyltransferase F 1581 132
THC0290_0940 CDS 1107201:1107863 - A600 B183 C44 9.38 -1.07 Probable thiamine diphosphokinase 1582 1049
THC0290_0942 clpB CDS 1110287:1112887 + A1213 B415 C124 12.25 1.39 ATPase with chaperone activity ATP-binding subunit 1585 2277
THC0290_N_0675 Rfp45 indep 1119827:1119911 - A1765 B546 C143 7.34 1.09 new transcription segment 1595 3510
THC0290_N_0676 3prime 1120015:1120649 + A150 B59 C19 7.36 -1.03 new transcription segment 1596 189
THC0290_N_0677 5prime 1120961:1121203 - A1768 B546 C143 9.23 1.03 new transcription segment 1598 3658
THC0290_N_0685 intra 1130912:1130976 - A1127 B376 C109 9.64 1.23 new transcription segment 1618 2159
THC0290_0960 CDS 1130977:1132209 - A1779 B546 C143 9.86 1.57 Major facilitator superfamily (MFS) permease 1619 3815
THC0290_0968 CDS 1137665:1138330 + A1601 B535 C143 10.04 1.16 Protein of unknown function 1631 2880
THC0290_0970 oxyR CDS 1138817:1139758 - A1861 B573 C149 9.39 1.11 Redox-sensitive transcriptional activator OxyR 1634 3960
THC0290_0971 CDS 1139820:1141016 - A108 B45 C16 8.82 -1.26 Protein of unknown function 1635 136
THC0290_N_0693 intra 1141017:1141163 - A108 B45 C16 10.52 -1.18 new transcription segment 1636 137
THC0290_0972 sodC CDS 1141164:1141685 - A107 B45 C16 10.56 -1.13 Superoxide dismutase [Cu-Zn] 1637 134
THC0290_N_0694 3prime 1141686:1141770 - A99 B44 C16 7.30 -1.13 new transcription segment 1638 120
THC0290_N_0695 Rfp46 indep 1143858:1144033 - A1709 B546 C143 9.80 1.11 new transcription segment 1641 3136
THC0290_N_0696 5prime 1143859:1144080 + A1765 B546 C143 6.95 1.41 new transcription segment 1642 3557
THC0290_0977 CDS 1147602:1149359 - A1795 B549 C143 6.25 2.13 Esterase/lipase/thioesterase family protein precursor 1647 3864
THC0290_0978 katG CDS 1149873:1152080 + A1791 B549 C143 12.32 5.76 Bi-functional catalase-peroxidase 1649 3846
THC0290_0979 CDS 1152256:1152894 + A1864 B574 C149 14.29 1.54 Probable peroxiredoxin 1650 3964
THC0290_N_0699 intra 1152895:1152978 + A1864 B574 C149 10.28 2.53 new transcription segment 1651 3965
THC0290_0980 CDS 1152979:1153290 + A1863 B574 C149 13.77 1.82 Thioredoxin family protein 1652 3962
THC0290_0981 CDS 1153330:1153587 + A1864 B574 C149 12.79 2.21 Hypothetical protein 1653 3963
THC0290_N_0701 3prime-PT 1153613:1154322 + A1661 B542 C143 7.37 3.26 new transcription segment 1654 3034
THC0290_0993 CDS 1167298:1168647 + A985 B310 C84 7.63 -1.17 Major facilitator superfamily (MFS) permease 1670 1940
THC0290_N_0709 5prime 1168710:1168824 + A838 B254 C69 10.45 1.12 new transcription segment 1671 1746
THC0290_1006 CDS 1184239:1184796 - A1473 B507 C142 8.02 -1.36 LemA family protein 1694 2668
THC0290_N_0722 5prime 1191365:1191583 - A1559 B526 C143 11.42 1.14 new transcription segment 1702 2822
THC0290_N_0723 intra 1192145:1192355 + A1747 B546 C143 11.27 2.03 new transcription segment 1705 3248
THC0290_1043 hupA CDS 1220069:1220365 - A540 B180 C44 12.92 -1.18 Histone-like bacterial DNA-binding protein HU-alpha 1752 744
THC0290_1048 CDS 1225034:1227307 - A1156 B395 C120 8.67 -1.01 Protein of unknown function precursor, putative adhesin 1758 2190
THC0290_1070 CDS 1247959:1249245 + A523 B180 C44 10.47 -1.20 Glycosyl transferase, group 1 family protein 1789 703
THC0290_N_0755 5prime 1260033:1260135 - A1768 B546 C143 9.89 1.05 new transcription segment 1805 3603
THC0290_1087 CDS 1267536:1268105 - A394 B150 C42 8.26 -1.38 Protein of unknown function precursor 1815 504
THC0290_N_0761 5prime 1274218:1274287 + A1768 B546 C143 8.13 1.08 new transcription segment 1823 3659
THC0290_N_0766 3prime 1282771:1282957 + A1131 B379 C111 10.76 -1.26 new transcription segment 1834 2163
THC0290_N_0767 intra 1283071:1283169 + A1556 B525 C143 8.31 -1.42 new transcription segment 1835 2815
THC0290_N_0768 3prime 1284560:1285017 - A190 B69 C21 6.80 -1.19 new transcription segment 1837 236
THC0290_1100 yojE CDS 1285018:1285905 - A572 B183 C44 7.97 -1.33 Probable permease YojE 1839 846
THC0290_1101 CDS 1286214:1287986 - A331 B122 C33 9.23 -1.18 Putative sugar-transporting permease 1841 430
THC0290_N_0771 Rfp49 indep 1288802:1288918 - A1765 B546 C143 7.17 1.12 new transcription segment 1843 3531
THC0290_N_0774 5prime 1290924:1291096 - A1765 B546 C143 12.04 1.44 new transcription segment 1847 3541
THC0290_N_0779 3prime 1297987:1298261 - A1644 B540 C143 7.56 2.38 new transcription segment 1857 2989
THC0290_1110 CDS 1298262:1298678 - A1721 B546 C143 10.55 1.98 Probable arsenate reductase (glutaredoxin) 1859 3177
THC0290_1111 CDS 1298680:1299294 - A1721 B546 C143 11.30 2.40 Protein of unknown function 1860 3178
THC0290_1112 CDS 1299295:1299420 - A1721 B546 C143 10.44 2.70 Hypothetical protein 1861 3179
THC0290_1113 CDS 1299423:1299896 - A1721 B546 C143 11.35 2.80 Protein of unknown function 1862 3175
THC0290_N_0781 intra 1299897:1299959 - A1721 B546 C143 12.66 3.32 new transcription segment 1863 3176
THC0290_1114 CDS 1299960:1300283 - A1721 B546 C143 10.86 4.11 Probable transcriptional regulator, ArsR family 1864 3174
THC0290_1137 CDS 1329295:1330215 - A1795 B549 C143 6.57 2.10 Probable transcriptional regulator, AraC family 1895 3873
THC0290_1138 CDS 1330262:1330645 - A1795 B549 C143 7.02 2.38 Hypothetical protein 1896 3857
THC0290_1158 CDS 1349866:1350774 + A1141 B384 C112 5.15 1.44 Probable ribonuclease BN 1916 2174
THC0290_1223 CDS 1418395:1418796 - A1795 B549 C143 9.54 1.27 Protein of unknown function 2000 3874
THC0290_1224 CDS 1418799:1419512 - A1795 B549 C143 11.05 1.22 Protein of unknown function 2002 3875
THC0290_N_0809 intra 1437888:1437991 - A543 B180 C44 7.20 -1.67 new transcription segment 2031 765
THC0290_1245 CDS 1438036:1438314 - A545 B180 C44 11.79 -1.49 Thiol:disulfide interchange protein, C-terminal region 2032 772
THC0290_N_0811 intra 1438315:1438460 - A545 B180 C44 12.47 -1.52 new transcription segment 2033 774
THC0290_1246 CDS 1438461:1439183 - A545 B180 C44 12.51 -1.85 Thiol:disulfide interchange lipoprotein precursor, N-terminal region 2034 773
THC0290_N_0815 3prime 1446042:1446224 - A1762 B546 C143 10.16 1.69 new transcription segment 2043 3426
THC0290_1252 CDS 1446225:1446704 - A1762 B546 C143 11.32 1.38 Universal stress protein, UspA family 2044 3425
THC0290_N_0816 intra 1446727:1446954 - A1795 B549 C143 8.48 1.07 new transcription segment 2045 3872
THC0290_1254 CDS 1448226:1451315 + A1664 B542 C143 6.99 1.37 Probable transmembrane protein 2047 3043
THC0290_1258 CDS 1455281:1456540 - A1795 B549 C143 6.99 1.81 Putative capsular polysaccharide biosynthesis protein 2051 3866
THC0290_1270 CDS 1468900:1469292 + A1615 B535 C143 9.88 1.00 Protein of unknown function 2068 2917
THC0290_N_0822 3prime 1469293:1469476 + A1615 B535 C143 8.82 1.24 new transcription segment 2069 2918
THC0290_1278 hisG CDS 1475685:1476542 - A709 B202 C53 6.34 -1.20 ATP phosphoribosyltransferase 2079 1543
THC0290_N_0833 5prime 1489143:1489202 - A1709 B546 C143 9.78 1.53 new transcription segment 2099 3140
THC0290_N_0838 intra 1494771:1494824 - A600 B183 C44 11.52 -1.15 new transcription segment 2111 1082
THC0290_1297 lpxC/fabZ CDS 1494825:1496213 - A600 B183 C44 11.79 -1.31 Bifunctional enzyme : UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase and (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase 2112 1086
THC0290_1298 lpxD CDS 1496216:1497235 - A600 B183 C44 11.08 -1.70 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2113 1109
THC0290_N_0839 5prime 1497236:1497324 - A460 B168 C44 8.09 -1.02 new transcription segment 2114 598
THC0290_1300 CDS 1498732:1499442 + A183 B67 C21 5.46 -1.57 Probable transmembrane protein of unknown function 2117 229
THC0290_1309 gene 1510782:1511459 + A1765 B546 C143 10.59 1.13 Fragment of two-component system sensor histidine kinase (part 1) 2133 3489
THC0290_1320 CDS 1521863:1523305 - A600 B183 C44 11.76 -1.79 Phosphate transporter family protein 2144 1105
THC0290_1321 CDS 1523330:1523983 - A542 B180 C44 10.67 -1.93 Protein of unknown function 2145 762
THC0290_1323 CDS 1525827:1527404 + A526 B180 C44 9.51 -1.02 Probable S41 family peptidase 2147 709
THC0290_1337 CDS 1540897:1543509 + A1762 B546 C143 9.67 1.01 Two-component system sensor histidine kinase 2163 3388
THC0290_1344 CDS 1552913:1553296 - A1795 B549 C143 6.33 -1.29 Transposase IS1 family 2172 3856
THC0290_N_0852 3prime 1558388:1558447 + A867 B263 C71 4.89 1.24 new transcription segment 2178 1792
THC0290_1360 CDS 1571085:1571513 - A785 B238 C67 9.52 -1.43 Protein of unknown function 2199 1672
THC0290_1402 CDS 1619248:1620525 - A600 B183 C44 9.55 -1.16 Probable S41 family peptidase precursor 2279 1100
THC0290_1403 panB1 CDS 1620572:1621390 - A517 B180 C44 10.05 -1.07 3-methyl-2-oxobutanoate hydroxymethyltransferase panB1 2280 690
THC0290_N_0903 Rfp64 indep 1635872:1635993 - A1768 B546 C143 9.96 1.03 new transcription segment 2299 3683
THC0290_N_0906 intra 1642443:1642537 - A1716 B546 C143 9.61 1.05 new transcription segment 2308 3162
THC0290_1424 CDS 1649508:1651811 + A1787 B549 C143 10.72 1.61 Probable aminotransferase 2316 3838
THC0290_N_0921 3prime-PT 1668796:1669027 - A1651 B542 C143 5.34 1.10 new transcription segment 2338 3012
THC0290_N_0922 3prime 1669028:1669134 - A1857 B572 C149 8.02 1.67 new transcription segment 2339 3955
THC0290_1436 CDS 1669135:1669644 - A1605 B535 C143 10.05 1.47 Protein of unknown function 2341 2892
THC0290_N_0924 intra 1669645:1669745 - A1606 B535 C143 10.11 1.81 new transcription segment 2342 2893
THC0290_N_0929 3prime 1673625:1673962 + A1644 B540 C143 6.35 1.19 new transcription segment 2352 2990
THC0290_N_0930 intra 1675609:1675691 - A1765 B546 C143 8.99 2.21 new transcription segment 2354 3540
THC0290_1444 CDS 1675692:1676540 - A1762 B546 C143 10.14 1.93 Protein of unknown function 2355 3424
THC0290_1455 CDS 1687990:1688883 + A1453 B504 C142 5.63 -1.07 Probable transcriptional regulator, LysR family 2381 2645
THC0290_N_0953 3prime 1704683:1704758 - A1126 B376 C109 9.44 1.38 new transcription segment 2403 2158
THC0290_N_0963 3prime-PT 1717045:1717466 + A1672 B543 C143 6.80 -1.13 new transcription segment 2419 3066
THC0290_N_0964 5prime 1718789:1718853 - A1068 B355 C104 12.91 1.02 new transcription segment 2422 2039
THC0290_N_0976 3prime 1730076:1730154 - A1573 B530 C143 8.39 1.55 new transcription segment 2449 2842
THC0290_1494 CDS 1730155:1732128 - A1761 B546 C143 10.66 1.12 Probable ribonuclease 2450 3382
THC0290_N_0977 5prime 1732129:1732257 - A1768 B546 C143 10.21 1.24 new transcription segment 2451 3627
THC0290_1496 CDS 1735654:1738056 + A536 B180 C44 11.86 -1.59 Putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits 2454 733
THC0290_1498 rho CDS 1739236:1740987 - A520 B180 C44 11.73 -1.03 Transcription termination factor Rho 2458 698
THC0290_N_0985 3prime 1746723:1746924 - A500 B175 C44 5.65 -1.29 new transcription segment 2468 667
THC0290_1505 CDS 1746925:1747419 - A1456 B505 C142 6.98 -1.01 Putative phosphoesterase 2470 2649
THC0290_1522 CDS 1769814:1770386 - A852 B256 C70 7.42 -1.86 Protein of unknown function related to microcin resistance protein McbG 2494 1773
THC0290_N_0997 repeated_region 1782224:1782801 - A568 B183 C44 6.61 -1.12 new transcription segment 2503 842
THC0290_1528 CDS 1782802:1783425 - A600 B183 C44 9.36 -1.70 Acetyltransferase, GNAT family 2505 1064
THC0290_1529 CDS 1783418:1783774 - A600 B183 C44 10.19 -1.56 Protein of unknown function 2506 1063
THC0290_N_0999 intra 1783775:1784020 - A600 B183 C44 10.96 -1.39 new transcription segment 2507 1065
THC0290_N_1000 intra 1785218:1785270 - A598 B183 C44 9.19 -1.02 new transcription segment 2510 996
THC0290_1531 CDS 1785271:1786122 - A598 B183 C44 10.23 -1.11 Probable outer membrane protein precursor, OmpA family 2511 995
THC0290_N_1004 3prime 1788343:1788481 - A1665 B542 C143 10.26 1.04 new transcription segment 2517 3045
THC0290_1543 CDS 1797232:1798140 + A1765 B546 C143 10.44 1.44 Probable nucleoside-diphosphate sugar epimerase 2537 3481
THC0290_N_1028 5prime 1806149:1806265 + A894 B277 C76 9.30 -1.69 new transcription segment 2560 1823
THC0290_1553 CDS 1806266:1806697 + A309 B116 C33 8.82 -1.54 NUDIX hydrolase 2561 394
THC0290_N_1030 3prime-PT 1811120:1811571 - A756 B223 C61 6.73 -1.20 new transcription segment 2567 1630
THC0290_N_1031 3prime 1811565:1811830 + A1643 B540 C143 8.23 1.13 new transcription segment 2568 2983
THC0290_1569 CDS 1824808:1827336 + A1796 B549 C143 8.75 2.35 Probable TonB-dependent outer membrane siderophore receptor precursor 2592 3877
THC0290_1573 CDS 1830690:1831748 + A1115 B373 C109 11.03 1.22 Protein of unknown function 2599 2145
THC0290_N_1053 3prime 1840491:1841109 - A1570 B528 C143 8.52 1.20 new transcription segment 2615 2838
THC0290_1594 CDS 1848581:1850773 - A1795 B549 C143 7.61 2.85 Protein of unknown function 2630 3865
THC0290_1595 CDS 1851066:1852952 + A1762 B546 C143 11.50 1.13 Protein of unknown function precursor, putative adhesin 2631 3405
THC0290_N_1058 intra 1852953:1853067 + A1762 B546 C143 9.39 1.08 new transcription segment 2632 3406
THC0290_N_1060 3prime 1853392:1853555 - A376 B143 C41 12.88 2.27 new transcription segment 2634 481
THC0290_1596 trxB1 CDS 1853556:1854503 - A377 B143 C41 12.96 2.37 Thioredoxin-disulfide reductase 2635 483
THC0290_N_1062 5prime 1856154:1856259 - A926 B287 C78 8.18 -1.37 new transcription segment 2638 1861
THC0290_1599 CDS 1857456:1858334 - A601 B183 C44 9.59 -1.02 Probable transmembrane protein of unknown function. Predicted permease 2642 1158
THC0290_N_1072 5prime 1868837:1869005 - A838 B254 C69 10.55 1.28 new transcription segment 2658 1747
THC0290_1618 CDS 1879036:1879245 + A1250 B419 C125 4.98 -1.34 Hypothetical protein 2675 2364
THC0290_N_1087 intra 1888625:1888779 + A1207 B415 C124 11.71 1.33 new transcription segment 2693 2265
THC0290_1637 fsr CDS 1898436:1899650 - A573 B183 C44 7.93 -1.22 Major facilitator superfamily (MFS) permease. Fosmidomycin resistance protein 2711 849
THC0290_1640 CDS 1901160:1902068 - A1714 B546 C143 10.13 1.14 Probable transmembrane protein of unknown function 2716 3155
THC0290_1657 glnA CDS 1920647:1922836 - A961 B305 C84 11.94 -1.25 Glutamate--ammonia ligase 2746 1903
THC0290_N_1120 3prime 1932156:1932279 - A536 B180 C44 8.34 -1.70 new transcription segment 2764 732
THC0290_1668 vdh CDS 1932280:1933383 - A536 B180 C44 12.85 -1.71 Valine dehydrogenase 2765 734
THC0290_1671 csaA CDS 1935831:1936169 - A997 B316 C86 6.87 1.24 Protein secretion chaperone CsaA 2768 1952
THC0290_N_1125 Rfp73 indep 1939566:1939699 + A1768 B546 C143 5.27 1.25 new transcription segment 2771 3684
THC0290_N_1134 Rfp74 indep 1954656:1954725 - A1749 B546 C143 7.02 1.37 new transcription segment 2789 3325
THC0290_1685 CDS 1957762:1958214 + A1720 B546 C143 12.79 2.94 Probable transcriptional regulator, MarR-family 2796 3172
THC0290_1686 CDS 1958217:1958849 + A1720 B546 C143 14.08 2.26 Nitroreductase 2797 3170
THC0290_1687 yceI CDS 1958866:1959432 + A1720 B546 C143 14.34 2.08 Protein of unknown function YceI precursor 2798 3171
THC0290_N_1138 3prime 1959433:1959477 + A1720 B546 C143 8.45 2.77 new transcription segment 2799 3173
THC0290_N_1140 intra 1961109:1961220 + A718 B205 C53 6.45 -1.02 new transcription segment 2803 1560
THC0290_N_1150 intra 1977128:1977205 - A1768 B546 C143 10.78 1.02 new transcription segment 2830 3702
THC0290_N_1151 repeated_region 1977443:1978208 - A1768 B546 C143 7.95 1.15 new transcription segment 2832 3596
THC0290_N_1154 5prime 1987994:1988043 + A931 B292 C81 5.58 -1.44 new transcription segment 2843 1867
THC0290_N_1157 3prime 1990779:1991250 + A690 B194 C49 7.11 -1.02 new transcription segment 2848 1496
THC0290_N_1160 3prime 1993681:1993757 - A943 B298 C82 7.03 3.29 new transcription segment 2854 1882
THC0290_1718 rpsT CDS 2002916:2003167 - A786 B238 C67 12.66 -1.23 30S ribosomal protein S20 2863 1673
THC0290_N_1163 3prime 2003168:2003329 - A786 B238 C67 13.01 -1.06 new transcription segment 2864 1674
THC0290_tRNA_0033 tRNA 2003330:2003404 - A1769 B546 C143 11.12 1.15 transfer RNA-Glu 2865 3759
THC0290_tRNA_0034 tRNA 2003436:2003507 - A1769 B546 C143 10.64 1.26 transfer RNA-Glu 2866 3760
THC0290_N_1167 intra 2006194:2006263 + A1779 B546 C143 10.62 1.33 new transcription segment 2871 3820
THC0290_1742 maf CDS 2030394:2030981 + A600 B183 C44 9.27 -1.17 Septum formation protein Maf 2902 1114
THC0290_N_1179 intra 2030982:2031255 + A313 B119 C33 7.69 -1.23 new transcription segment 2903 398
THC0290_1753 CDS 2040786:2040938 - A540 B180 C44 15.72 -1.56 Hypothetical protein 2924 741
THC0290_1779 bluB/cobT CDS 2061863:2063539 - A314 B119 C33 7.27 -1.18 Bifunctional protein : cob(II)yrinic acid a,c-diamide reductase and nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2962 399
THC0290_N_1199 Rfp80 indep 2063397:2064482 + A1779 B546 C143 7.52 1.20 new transcription segment 2963 3809
THC0290_N_1200 intra 2063540:2063723 - A513 B180 C44 8.28 -1.63 new transcription segment 2964 685
THC0290_1780 cobU CDS 2063724:2064236 - A606 B183 C44 8.94 -1.74 Bifunctional protein cobU : adenosylcobinamide kinase and adenosylcobinamide-phosphate guanylyltransferase 2966 1257
THC0290_1786 CDS 2068911:2069726 + A1795 B549 C143 9.36 2.60 Probable transmembrane protein of unknown function 2972 3869
THC0290_1803 apbE CDS 2087394:2088356 - A1088 B365 C107 11.45 1.13 Membrane-associated protein involved in thiamine biosynthesis 2998 2101
THC0290_1804 CDS 2088365:2088802 - A1088 B365 C107 11.11 1.50 Thioredoxin family protein 2999 2081
THC0290_1811 CDS 2096360:2096578 - A1088 B365 C107 9.15 1.39 Protein of unknown function 3010 2096
THC0290_1813 CDS 2097360:2097836 - A1088 B365 C107 12.46 1.40 Probable transmembrane protein of unknown function 3013 2086
THC0290_1814 CDS 2097857:2099929 - A1088 B365 C107 11.82 1.96 Probable TonB-dependent outer membrane receptor precursor 3014 2082
THC0290_1815 CDS 2100027:2100941 + A1088 B365 C107 13.53 1.21 Protein of unknown function precursor 3015 2080
THC0290_1816 CDS 2100947:2101285 + A1088 B365 C107 12.50 1.16 Protein of unknown function 3016 2087
THC0290_N_1215 3prime 2101286:2101337 + A1717 B546 C143 5.97 2.25 new transcription segment 3017 3163
THC0290_N_1216 3prime-PT 2101338:2101475 + A1493 B512 C143 5.11 1.94 new transcription segment 3018 2708
THC0290_1818 CDS 2103430:2107788 + A1762 B546 C143 8.23 2.72 Protein of unknown function precursor, putative adhesin 3021 3404
THC0290_1819 CDS 2107930:2110392 + A777 B236 C67 11.42 -1.18 Probable TonB-dependent outer membrane receptor precursor 3022 1663
THC0290_1820 fabH2 CDS 2110699:2111706 - A45 B25 C13 10.61 -1.13 3-oxoacyl-[acyl-carrier-protein] synthase III protein FabH2 3024 52
THC0290_1821 CDS 2111809:2112582 + A1264 B422 C125 6.79 -1.11 Probable transmembrane protein of unknown function 3025 2397
THC0290_1841 phoH CDS 2141811:2142761 - A1044 B344 C102 12.93 1.06 Phosphate starvation-inducible protein PhoH 3061 2009
THC0290_N_1249 3prime 2163005:2163365 - A1813 B557 C145 8.26 1.09 new transcription segment 3100 3903
THC0290_1864 CDS 2163366:2164622 - A1070 B357 C105 10.92 1.10 Major facilitator superfamily (MFS) permease 3102 2041
THC0290_1868 CDS 2168095:2168679 - A1749 B546 C143 9.31 1.25 RNA polymerase ECF-type sigma factor 3109 3328
THC0290_1869 uvrA1 CDS 2168946:2171735 + A1765 B546 C143 10.33 1.48 Excinuclease ABC, A subunit UvrA1 3111 3558
THC0290_1874 pepX2 CDS 2177914:2180046 + A525 B180 C44 10.58 -1.69 Xaa-Pro dipeptidyl-peptidase precursor 3122 706
THC0290_N_1260 3prime 2180084:2180270 + A1695 B546 C143 7.13 1.13 new transcription segment 3123 3105
THC0290_N_1272 5prime 2202131:2202187 - A1707 B546 C143 11.71 1.07 new transcription segment 3156 3128
THC0290_1908 mutL CDS 2217523:2219364 + A1507 B518 C143 11.27 1.03 DNA mismatch repair protein MutL 3181 2725
THC0290_1910 CDS 2220154:2221044 + A170 B63 C19 10.31 1.12 Rhomboid family protein 3183 211
THC0290_N_1285 intra 2221045:2221140 + A171 B63 C19 8.63 1.09 new transcription segment 3184 212
THC0290_N_1288 3prime-PT 2222573:2222733 - A1665 B542 C143 7.86 2.01 new transcription segment 3189 3047
THC0290_1913 CDS 2222771:2223451 - A1768 B546 C143 11.40 1.25 Probable transcriptional regulatory protein, Crp/Fnr family 3190 3678
THC0290_N_1290 intra 2225939:2225999 + A700 B199 C52 8.21 -1.02 new transcription segment 3192 1525
THC0290_1915 ccoS CDS 2226015:2226212 + A700 B199 C52 9.31 -1.89 Probable cytochrome cbb3 oxidase maturation protein CcoS 3193 1526
THC0290_1916 CDS 2226196:2227179 + A700 B199 C52 9.63 -1.76 Probable acyl-[acyl-carrier-protein] desaturase 3194 1527
THC0290_N_1291 intra 2227180:2227238 + A700 B199 C52 10.01 -1.84 new transcription segment 3195 1524
THC0290_1924 hemN CDS 2233612:2234976 - A701 B199 C52 8.29 -1.36 Oxygen-independent coproporphyrinogen III oxidase HemN 3205 1529
THC0290_1925 acnA CDS 2235143:2237407 - A218 B81 C25 14.18 1.32 Aconitate hydratase 3206 279
THC0290_N_1298 3prime 2240124:2240177 - A297 B110 C31 4.97 -1.26 new transcription segment 3211 382
THC0290_tRNA_0041 tRNA 2267163:2267236 - A1769 B546 C143 11.00 1.44 transfer RNA-Trp 3237 3758
THC0290_1946 xerC CDS 2269424:2270320 - A1043 B344 C102 11.46 1.35 Tyrosine recombinase XerC 3248 2007
THC0290_1949 CDS 2272035:2272910 - A1765 B546 C143 9.98 1.56 Probable transmembrane protein of unknown function 3254 3555
THC0290_1950 CDS 2272914:2273141 - A1762 B546 C143 9.72 1.17 Hypothetical protein 3255 3419
THC0290_N_1320 intra 2274529:2274766 - A1150 B392 C119 5.10 -1.01 new transcription segment 3259 2183
THC0290_1966 CDS 2294705:2295145 + A527 B180 C44 11.36 -1.60 Low molecular weight phosphotyrosine protein phosphatase 3285 713
THC0290_1967 CDS 2295152:2295868 + A527 B180 C44 10.33 -1.59 Probable methyltransferase 3286 714
THC0290_N_1331 3prime-PT 2295401:2295816 - A1644 B540 C143 6.19 1.80 new transcription segment 3287 2991
THC0290_1968 CDS 2295865:2296506 - A1768 B546 C143 10.15 1.23 Protein of unknown function 3288 3712
THC0290_N_1333 3prime 2295869:2296343 + A758 B224 C62 7.32 -1.41 new transcription segment 3289 1632
THC0290_1971 CDS 2298569:2299102 - A1564 B526 C143 9.29 1.22 Probable ribosomal-protein-amino-adic N-acetyltransferase 3293 2830
THC0290_1972 dapF CDS 2299113:2299883 - A1564 B526 C143 11.74 1.33 Diaminopimelate epimerase 3294 2832
THC0290_N_1335 5prime 2299884:2300001 - A1707 B546 C143 10.52 1.54 new transcription segment 3295 3129
THC0290_1978 CDS 2307042:2307821 + A522 B180 C44 12.62 -1.07 Protein of unknown function 3306 701
THC0290_N_1357 3prime-PT 2359706:2360343 - A563 B183 C44 8.28 1.05 new transcription segment 3377 832
THC0290_N_1372 3prime 2396621:2397103 - A598 B183 C44 10.81 -1.22 new transcription segment 3423 990
THC0290_N_1375 3prime-PT 2399570:2399806 - A651 B183 C44 8.61 1.49 new transcription segment 3428 1421
THC0290_2100 CDS 2419224:2422433 + A1796 B549 C143 13.13 2.30 SusC/RagA family TonB-dependent receptor precursor, Omp121 family 3470 3882
THC0290_2101 CDS 2422448:2423926 + A1796 B549 C143 12.39 1.23 SusD/RagB family lipoprotein precursor 3471 3883
THC0290_N_1385 3prime 2423927:2423992 + A1786 B549 C143 5.90 1.24 new transcription segment 3473 3837
THC0290_2102 CDS 2423993:2424727 + A1557 B526 C143 12.13 1.19 Probable tRNA/rRNA methyltransferase 3474 2818
THC0290_2103 CDS 2424831:2425625 - A1211 B415 C124 10.82 1.83 Probable transmembrane protein of unknown function 3477 2272
THC0290_2104 CDS 2425856:2427133 + A432 B164 C44 8.83 -1.22 Putative AAA family ATPase 3479 557
THC0290_2110 CDS 2431971:2434121 - A600 B183 C44 11.50 -1.08 Protein of unknown function precursor, putative S46 family serine protease 3488 1099
THC0290_2111 CDS 2434311:2434772 + A1795 B549 C143 8.13 1.04 Protein of unknown function containing LysM domain 3489 3858
THC0290_2130 fabH1 CDS 2452498:2453556 + A1066 B354 C104 11.91 1.19 3-oxoacyl-[acyl-carrier-protein] synthase III protein FabH1 3522 2036
THC0290_N_1414 5prime 2473389:2473464 + A1749 B546 C143 10.77 1.16 new transcription segment 3549 3324
THC0290_2164 exbD1 CDS 2499959:2500573 - A399 B152 C42 14.14 -1.13 Biopolymer transport ExbD1 protein 3584 511
THC0290_2165 exbB CDS 2500639:2501457 - A398 B152 C42 13.29 -1.49 Biopolymer transport ExbB protein 3586 508
THC0290_N_1427 5prime 2501458:2501514 - A395 B151 C42 9.70 -1.88 new transcription segment 3587 505
THC0290_2168 pac CDS 2504933:2507317 - A657 B184 C45 9.54 -1.04 Penicillin G acylase precursor 3593 1429
THC0290_N_1437 5prime 2526804:2526891 - A1422 B492 C141 5.48 1.71 new transcription segment 3619 2604
THC0290_N_1440 3prime 2536180:2536241 - A534 B180 C44 6.13 -1.40 new transcription segment 3626 728
THC0290_2193 CDS 2536242:2537348 - A538 B180 C44 9.82 -1.56 Protein of unknown function precursor 3627 736
THC0290_2194 CDS 2538052:2540829 + A538 B180 C44 11.18 -2.35 Probable TonB-dependent outer membrane receptor precursor 3628 737
THC0290_2249 ansA CDS 2601255:2602283 + A600 B183 C44 9.30 -1.09 Asparaginase 1 3708 1059
THC0290_N_1470 5prime 2602284:2602336 + A496 B175 C44 6.67 -1.55 new transcription segment 3709 662
THC0290_2255 bioA CDS 2608781:2610052 - A609 B183 C44 10.21 -1.02 Adenosylmethionine--8-amino-7-oxononanoate transaminase 3722 1274
THC0290_2266 pepX1 CDS 2621923:2624088 - A607 B183 C44 11.19 -1.86 Xaa-Pro dipeptidyl-peptidase precursor 3739 1260
THC0290_N_1492 3prime 2637955:2638255 - A120 B50 C18 6.74 -1.09 new transcription segment 3763 153
THC0290_2295 pepC CDS 2650968:2652155 + A545 B180 C44 12.59 -1.13 Bleomycin hydrolase 3787 778
THC0290_2296 CDS 2652224:2654422 - A730 B209 C54 9.73 1.79 Probable TonB-dependent outer membrane receptor precursor 3788 1596
THC0290_N_1502 intra 2654423:2654506 - A1549 B523 C143 10.27 1.07 new transcription segment 3789 2795
THC0290_N_1504 intra 2655471:2655533 - A528 B180 C44 9.79 -1.51 new transcription segment 3793 716
THC0290_2298 CDS 2655534:2656004 - A528 B180 C44 10.53 -1.47 Probable transcriptional regulator, AsnC family 3794 715
THC0290_N_1505 intra 2656005:2656153 - A631 B183 C44 8.31 -1.48 new transcription segment 3795 1364
THC0290_2305 fabH3 CDS 2662409:2663410 - A600 B183 C44 12.93 -1.12 3-oxoacyl-[acyl-carrier-protein] synthase III protein FabH3 3806 1078
THC0290_N_1511 intra 2663411:2663527 - A600 B183 C44 11.80 -1.31 new transcription segment 3807 1058
THC0290_2317 sufD CDS 2672407:2673723 - A773 B234 C66 12.70 1.20 Fe-S assembly protein, SufD 3826 1658
THC0290_2318 sufC CDS 2673725:2674474 - A773 B234 C66 13.32 1.44 Fe-S assembly ATPase, SufC 3827 1659
THC0290_2319 sufB CDS 2674511:2675959 - A772 B234 C66 13.62 1.80 Fe-S assembly protein, SufB 3828 1657
THC0290_N_1519 intra 2675960:2676041 - A1708 B546 C143 13.14 2.18 new transcription segment 3829 3132
THC0290_2320 sufA CDS 2676042:2676371 - A1708 B546 C143 13.34 2.23 Scaffold protein for Fe-S assembly, SufA 3830 3131
THC0290_N_1520 5prime 2676372:2676436 - A1709 B546 C143 13.27 2.05 new transcription segment 3831 3141
THC0290_2321 CDS 2676630:2677490 + A18 B9 C4 9.83 -2.17 Putative metal-dependent hydrolase 3832 23
THC0290_2322 CDS 2677561:2679165 + A609 B183 C44 12.28 -1.36 Probable S8 subtilisin family serine endopeptidase precursor 3833 1277
THC0290_N_1522 intra 2679166:2679246 + A602 B183 C44 8.94 -1.08 new transcription segment 3834 1206
THC0290_2323 CDS 2679247:2681118 + A609 B183 C44 11.59 -1.50 Probable M1 family aminopeptidase precursor 3835 1278
THC0290_2324 CDS 2681125:2681865 + A526 B180 C44 10.28 -1.05 Hypothetical protein 3836 712
THC0290_N_1528 3prime 2689772:2690654 - A1779 B546 C143 8.00 1.36 new transcription segment 3849 3814
THC0290_2340 CDS 2707725:2708981 - A1710 B546 C143 10.46 1.11 Probable ABC-type transport system, permease component 3869 3143
THC0290_2343 mreC CDS 2711803:2712591 + A600 B183 C44 10.51 -1.10 Rod shape-determining protein MreC 3873 1060
THC0290_2345 pbpA CDS 2713087:2715027 + A561 B183 C44 10.14 -1.06 Penicillin-binding protein 2. Peptidoglycan glycosyltransferase 3875 826
THC0290_2357 CDS 2727885:2728442 - A545 B180 C44 10.07 -1.27 Probable lipoprotein precursor. Putative lipopolysaccharide assembly protein LptC 3895 776
THC0290_2358 CDS 2728448:2729662 - A545 B180 C44 10.74 -1.12 Protein of unknown function precursor, putative outer membrane protein 3896 780
THC0290_tRNA_0049 tRNA 2730483:2730558 + A1769 B546 C143 8.23 1.15 transfer RNA-Phe 3898 3757
THC0290_N_1550 3prime 2730564:2730708 - A1762 B546 C143 7.68 1.90 new transcription segment 3899 3429
THC0290_2361 smf CDS 2731266:2732366 - A526 B180 C44 7.61 -1.19 Protein Smf of unknown function 3902 710
THC0290_2378 gene 2750023:2750625 - A1490 B510 C143 9.00 1.12 Truncated TonB-dependent outer membrane receptor 3935 2697
THC0290_2385 CDS 2756669:2758039 + A1795 B549 C143 9.76 2.74 RCC1 (Regulator of Chromosome Condensation) repeat domain protein precursor 3947 3862
THC0290_N_1572 3prime 2758040:2758319 + A1795 B549 C143 8.27 2.56 new transcription segment 3949 3863