Differential expression: Exposure to fish plasma [Plasma.vs.Ctrl]

Differentially expressed genes in cells incubated 15 min with rainbow trout plasma relative to control (1% peptone water washed cells without plasma) at 18°C 200 rpm.

List of differentially expressed genomic elements (CDS and newly identified RNA elements).
Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.

Reference samples: EP2_a, EP2_b
Test samples: Plasma_a, Plasma_b

Locus Tag Name (v2) Feature type Location Clusters Base Expr. Delta Expr. Annotation Chromosome order Clusters order
THC0290_0001 rnr CDS 554:2728 + A1753 B546 C143 11.91 1.04 Ribonuclease R 1 3345
THC0290_0002 CDS 2737:3408 + A1227 B418 C125 11.91 1.49 Protein of unknown function precursor 2 2299
THC0290_N_0001 intra 3409:3490 + A1552 B523 C143 9.44 1.92 new transcription segment 3 2810
THC0290_0003 CDS 3517:4200 + A1227 B418 C125 11.26 1.37 Probable transmembrane protein of unknown function 4 2300
THC0290_N_0004 3prime-PT 4241:4559 + A1245 B419 C125 7.74 3.43 new transcription segment 5 2351
THC0290_N_0006 Rfp1 indep 5284:5631 - A1248 B419 C125 7.13 1.58 new transcription segment 10 2357
THC0290_0006 CDS 7285:7614 + A1751 B546 C143 12.18 -1.71 Hypothetical protein precursor 11 3336
THC0290_0008 CDS 7968:8222 + A1768 B546 C143 12.71 -1.06 Protein of unknown function 13 3720
THC0290_N_0009 intra 9251:9388 - A802 B244 C67 6.04 -1.35 new transcription segment 17 1697
THC0290_N_0010 Rfp2 indep 10630:10929 + A1248 B419 C125 7.88 2.30 new transcription segment 19 2358
THC0290_N_0014 5prime 18906:19034 + A361 B138 C39 5.54 2.21 new transcription segment 28 462
THC0290_N_0015 3prime 21309:21961 + A1822 B558 C145 8.05 1.21 new transcription segment 30 3915
THC0290_N_0016 3prime 21441:22155 - A731 B210 C55 9.48 2.11 new transcription segment 31 1600
THC0290_0017 CDS 22156:22707 - A733 B210 C55 11.43 1.28 Protein of unknown function 32 1602
THC0290_N_0017 intra 22708:22762 - A733 B210 C55 10.98 1.49 new transcription segment 33 1604
THC0290_0018 CDS 22763:23272 - A733 B210 C55 12.29 1.26 Probable cAMP-binding protein 34 1603
THC0290_N_0018 5prime 24970:25238 + A1723 B546 C143 7.15 3.74 new transcription segment 37 3181
THC0290_N_0019 5prime 25240:25332 + A1244 B419 C125 13.61 3.17 new transcription segment 38 2342
THC0290_N_0020 5prime 25333:25398 + A1254 B420 C125 6.38 2.20 new transcription segment 39 2378
THC0290_0021 remF CDS 25399:25836 + A1257 B421 C125 14.88 1.27 Gliding motility protein RemF precursor 40 2385
THC0290_0024 sprD CDS 28731:32459 + A1256 B421 C125 13.70 1.11 Putative cell surface protein precursor SprD 45 2380
THC0290_0028 mltD CDS 45576:47672 + A654 B184 C45 12.18 1.07 Membrane-bound lytic murein transglycosylase D precursor 53 1425
THC0290_N_0028 3prime 48179:48337 + A1817 B557 C145 8.00 1.65 new transcription segment 57 3908
THC0290_N_0029 Rfp3 indep 49141:49425 + A1768 B546 C143 8.67 1.06 new transcription segment 58 3650
THC0290_0032 fjo17 CDS 51149:52540 + A443 B166 C44 11.57 -1.50 Protein of unknown function Fjo17 62 571
THC0290_0033 gldH CDS 52515:53027 + A595 B183 C44 11.48 -1.80 Gliding motility lipoprotein precursor GldH 63 967
THC0290_0034 mrcA CDS 53033:55357 + A231 B83 C25 11.82 -1.92 Penicillin-binding protein 1A 64 302
THC0290_N_0032 intra 55358:55525 + A231 B83 C25 10.09 -1.67 new transcription segment 65 303
THC0290_0035 atoD CDS 55526:56224 + A605 B183 C44 12.31 -1.58 3-oxoacid CoA-transferase subunit A family protein AtoD 67 1236
THC0290_N_0034 3prime 60627:61113 - A136 B54 C18 8.75 2.35 new transcription segment 71 173
THC0290_0038 CDS 61114:62553 - A1797 B550 C143 10.28 1.06 Probable transmembrane protein of unknown function 72 3884
THC0290_N_0035 3prime 62567:62668 - A722 B206 C54 9.29 1.99 new transcription segment 73 1577
THC0290_0040 ogt1 CDS 63488:63958 - A1021 B328 C90 8.44 -1.71 Methylated-DNA--[protein]-cysteine S-methyltransferase 76 1976
THC0290_0042 hemB CDS 64879:65871 - A588 B183 C44 9.81 -1.08 Porphobilinogen synthase 80 930
THC0290_0045 CDS 67822:68385 - A588 B183 C44 10.48 -1.03 Protein of unknown function precursor 83 927
THC0290_0046 CDS 68389:68934 - A588 B183 C44 10.21 -1.22 Probable ribosomal-protein-amino-adic N-acetyltransferase 84 933
THC0290_0047 CDS 68944:69930 - A588 B183 C44 10.33 -1.37 Hypothetical lipoprotein precursor 85 934
THC0290_N_0039 Rfp5 indep 69429:69507 + A1768 B546 C143 4.75 1.24 new transcription segment 86 3616
THC0290_0048 hemE CDS 69952:70974 - A588 B183 C44 10.14 -1.49 Uroporphyrinogen decarboxylase 87 931
THC0290_N_0040 intra 70975:71053 - A588 B183 C44 9.25 -1.34 new transcription segment 88 926
THC0290_0049 hemD CDS 71054:71716 - A588 B183 C44 9.34 -1.32 Uroporphyrinogen-III synthase 89 932
THC0290_0050 hemC CDS 71716:72642 - A110 B46 C16 9.03 -2.50 Hydroxymethylbilane synthase 90 139
THC0290_N_0041 intra 72643:72710 - A111 B46 C16 7.69 -3.94 new transcription segment 91 141
THC0290_0051 hemA CDS 72711:73952 - A111 B46 C16 9.61 -2.10 Glutamyl-tRNA reductase 92 140
THC0290_N_0042 5prime 74099:74180 + A1709 B546 C143 6.77 -1.42 new transcription segment 93 3139
THC0290_0056 crt CDS 78125:78907 + A1095 B368 C108 11.19 -1.27 Probable 3-hydroxybutyryl-CoA dehydratase 98 2116
THC0290_N_0043 3prime 78654:78915 - A1648 B540 C143 6.82 3.08 new transcription segment 99 3006
THC0290_0057 CDS 78916:79563 - A918 B285 C78 9.11 1.32 Probable hydrolase 101 1851
THC0290_N_0046 intra 79564:79634 - A918 B285 C78 8.19 1.04 new transcription segment 103 1852
THC0290_0059 plsC CDS 80660:81394 - A941 B297 C82 10.37 -1.97 1-acylglycerol-3-phosphate O-acyltransferase 105 1879
THC0290_N_0047 3prime 81395:81474 - A941 B297 C82 5.35 -2.99 new transcription segment 106 1880
THC0290_N_0048 intra 81912:82047 - A629 B183 C44 9.95 1.05 new transcription segment 108 1357
THC0290_0064 CDS 85412:86431 + A1302 B443 C129 11.16 1.49 Probable transmembrane protein of unknown function 114 2444
THC0290_0065 CDS 86458:87414 + A999 B318 C86 10.02 1.56 Putative carboxypeptidase 115 1954
THC0290_N_0050 intra 87415:87513 + A1824 B558 C145 7.34 2.45 new transcription segment 116 3917
THC0290_0066 CDS 87514:87873 + A125 B52 C18 8.47 2.25 Protein of unknown function 117 158
THC0290_0067 tas CDS 87874:88914 - A510 B179 C44 9.26 -1.35 Oxidoreductase Tas, aldo/keto reductase family 118 681
THC0290_N_0051 3prime 87874:88509 + A130 B53 C18 8.15 2.85 new transcription segment 119 163
THC0290_0068 CDS 89048:90010 - A446 B166 C44 12.47 -1.65 Flagellar motor/Chemotaxis (MotB)-related lipoprotein precursor 120 575
THC0290_N_0053 intra 90011:90080 - A446 B166 C44 12.75 -1.81 new transcription segment 121 576
THC0290_0069 xth CDS 90081:90842 - A605 B183 C44 11.40 -1.51 Exodeoxyribonuclease III 122 1243
THC0290_0072 proC CDS 94366:95142 - A605 B183 C44 12.19 -1.19 Pyrroline-5-carboxylate reductase 128 1237
THC0290_N_0058 intra 97272:97344 - A598 B183 C44 10.51 -1.00 new transcription segment 131 998
THC0290_N_0059 intra 97657:97728 - A352 B131 C36 5.88 -1.80 new transcription segment 133 452
THC0290_0081 mntH CDS 104165:106036 + A1089 B366 C107 13.20 1.02 Probable manganese transport protein mntH 141 2108
THC0290_N_0062 intra 106037:106329 + A1090 B366 C107 12.37 1.03 new transcription segment 142 2109
THC0290_0082 sirR CDS 106330:106983 + A1072 B359 C105 12.06 1.20 Probable metal-dependent transcriptional regulator 143 2043
THC0290_N_0063 repeated_region 106984:108354 + A736 B211 C55 11.75 2.45 new transcription segment 144 1609
THC0290_0083 CDS 107603:108094 - A1442 B502 C142 8.13 -3.23 Protein of unknown function precursor 145 2627
THC0290_0084 CDS 108355:108948 + A736 B211 C55 11.61 2.68 Protein of unknown function 147 1608
THC0290_N_0064 3prime 108949:109046 + A1800 B551 C143 12.98 2.68 new transcription segment 148 3887
THC0290_0086 CDS 110699:112627 - A1782 B547 C143 11.22 -1.15 Probable M1 family metalloprotease precursor 153 3830
THC0290_0087 CDS 112762:113097 - A1654 B542 C143 8.50 -1.24 Probable single-stranded DNA-binding protein 154 3023
THC0290_N_0068 Rfp7 indep 113267:113949 + A1747 B546 C143 8.88 2.20 new transcription segment 155 3296
THC0290_0088 CDS 113950:114297 + A1740 B546 C143 9.81 1.58 Protein of unknown function 157 3218
THC0290_0089 yeeZ CDS 114298:115119 + A1633 B540 C143 9.71 1.66 Putative enzyme of sugar metabolism YeeZ precursor 158 2955
THC0290_0090 pepO CDS 115174:117234 - A600 B183 C44 11.54 -1.20 M13 family metallopeptidase PepO precursor 160 1070
THC0290_0093 feoA CDS 121549:121791 + A1494 B512 C143 11.07 1.57 Ferrous iron transport protein A 163 2709
THC0290_0094 feoB CDS 121791:123884 + A1084 B365 C107 10.03 2.25 Ferrous iron transport protein B 164 2074
THC0290_N_0071 intra 123885:124433 + A1084 B365 C107 9.50 3.20 new transcription segment 165 2075
THC0290_0095 CDS 124434:125396 + A1399 B480 C139 8.61 2.56 Hypothetical protein 166 2573
THC0290_0096 CDS 125431:125595 - A1768 B546 C143 6.62 3.88 Hypothetical protein 167 3577
THC0290_N_0074 3prime 129899:129947 + A1188 B407 C123 7.60 1.66 new transcription segment 174 2228
THC0290_N_0075 Rfp8 indep 129929:130108 - A1768 B546 C143 6.70 2.65 new transcription segment 175 3608
THC0290_0101 dinB CDS 130216:131295 + A1160 B397 C120 8.80 2.71 DNA polymerase IV, damage-inducible protein DinB 176 2195
THC0290_N_0076 5prime 131417:131569 + A205 B75 C24 11.41 -3.37 new transcription segment 177 256
THC0290_0102 CDS 131570:132853 + A204 B75 C24 12.12 -3.15 Protein of unknown function 178 252
THC0290_N_0077 intra 132854:133118 + A205 B75 C24 11.74 -3.43 new transcription segment 179 257
THC0290_0103 CDS 133119:133640 + A204 B75 C24 12.32 -3.18 Protein of unknown function precursor 180 254
THC0290_0104 CDS 133660:134139 + A204 B75 C24 12.85 -2.69 Probable lipoprotein precursor 181 255
THC0290_0105 CDS 134151:135113 + A204 B75 C24 13.05 -2.07 Protein of unknown function precursor 182 253
THC0290_0106 CDS 135128:136084 + A204 B75 C24 13.94 -1.77 Protein of unknown function precursor 183 251
THC0290_0113 CDS 142567:143847 - A660 B185 C45 10.80 1.09 Protein of unknown function precursor 192 1434
THC0290_0114 CDS 143895:144854 - A1002 B318 C86 10.38 1.73 Probable transmembrane protein of unknown function 193 1957
THC0290_0123 atpC CDS 157010:157291 + A600 B183 C44 12.34 -1.02 ATP synthase epsilon subunit 206 1097
THC0290_0124 CDS 157356:157871 + A51 B28 C13 7.82 -1.28 Hypothetical transmembrane protein 208 58
THC0290_N_0088 intra 157872:157951 + A72 B35 C14 7.36 -2.47 new transcription segment 209 83
THC0290_0125 CDS 157952:158140 + A558 B183 C44 8.78 -1.25 Hypothetical protein 210 818
THC0290_0126 CDS 158144:158260 + A71 B35 C14 8.63 -1.88 Hypothetical protein 211 82
THC0290_0128 CDS 159521:159862 + A1244 B419 C125 13.19 3.12 Protein of unknown function precursor 213 2347
THC0290_N_0089 intra 159863:159978 + A1244 B419 C125 12.26 3.55 new transcription segment 214 2349
THC0290_0129 CDS 159979:160953 + A1248 B419 C125 13.46 1.33 Putative outer membrane protein precursor 215 2360
THC0290_N_0090 3prime 160954:161007 + A1281 B430 C125 6.02 2.61 new transcription segment 216 2419
THC0290_N_0091 3prime 162010:162767 + A1820 B557 C145 8.29 1.44 new transcription segment 218 3912
THC0290_0133 CDS 163777:164133 - A304 B113 C32 10.18 1.48 Protein of unknown function 224 389
THC0290_N_0094 5prime 164134:164212 - A305 B113 C32 9.44 1.74 new transcription segment 225 390
THC0290_N_0095 repeated_region 164214:164791 - A676 B189 C46 10.22 2.49 new transcription segment 226 1458
THC0290_0135 batE CDS 164792:165535 - A676 B189 C46 10.50 1.84 BatE protein 228 1457
THC0290_N_0097 repeated_region 165536:166702 - A677 B189 C46 14.41 1.05 new transcription segment 230 1468
THC0290_0136 batD CDS 166703:168505 - A677 B189 C46 11.60 1.42 BatD protein 231 1467
THC0290_0137 batC CDS 168527:169240 - A677 B189 C46 11.86 1.88 BatC protein 232 1463
THC0290_0138 batB CDS 170136:171176 - A677 B189 C46 11.32 1.72 BatB protein 234 1461
THC0290_N_0099 intra 171177:171320 - A677 B189 C46 11.46 1.33 new transcription segment 235 1464
THC0290_0139 CDS 171321:171701 - A677 B189 C46 11.21 1.78 Protein of unknown function 236 1462
THC0290_0140 batA CDS 171756:172757 - A677 B189 C46 11.59 1.00 BatA protein 238 1460
THC0290_0141 CDS 172759:174345 - A677 B189 C46 10.67 1.14 Probable transmembrane protein of unknown function 239 1459
THC0290_0144 CDS 178131:179366 + A1107 B371 C109 9.97 1.74 Protein of unknown function, putative transcriptional regulator 245 2131
THC0290_0145 pphA CDS 179347:180096 + A739 B212 C55 10.18 1.56 Phosphoprotein phosphatase 246 1613
THC0290_N_0105 3prime 181329:181417 - A1593 B534 C143 9.32 -1.96 new transcription segment 250 2868
THC0290_0148 gpsA CDS 181418:182413 - A16 B8 C3 10.80 -1.16 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 252 21
THC0290_N_0107 Rfp11 indep 182563:182671 + A1768 B546 C143 4.77 1.71 new transcription segment 253 3598
THC0290_0149 CDS 182667:183833 - A819 B248 C68 11.73 -1.76 Probable alcohol dehydrogenase 255 1722
THC0290_0150 nadD CDS 183908:184489 - A74 B35 C14 10.39 -1.35 Nicotinate-nucleotide adenylyltransferase 256 85
THC0290_N_0109 Rfp12 indep 184225:184363 + A1768 B546 C143 7.88 1.53 new transcription segment 257 3665
THC0290_0152 pgi CDS 187831:189474 - A595 B183 C44 11.32 -1.39 Glucose-6-phosphate isomerase 260 952
THC0290_tRNA_0003 tRNA 191432:191514 + A1769 B546 C143 12.87 -1.41 transfer RNA-Leu 265 3761
THC0290_N_0118 3prime-PT 191567:191761 - A1724 B546 C143 8.94 3.24 new transcription segment 266 3184
THC0290_N_0121 5prime 191971:192020 + A436 B165 C44 10.95 -1.61 new transcription segment 268 563
THC0290_0155 CDS 192021:193409 + A592 B183 C44 11.99 -1.06 ArgE/DapE/Acy1 family protein 269 945
THC0290_0157 CDS 194650:195750 + A1765 B546 C143 9.99 1.65 Probable transmembrane protein of unknown function 272 3507
THC0290_0158 pepP CDS 196171:197463 + A264 B94 C27 12.84 -1.81 Xaa-Pro aminopeptidase 273 347
THC0290_N_0123 3prime 198042:198354 - A616 B183 C44 9.50 2.63 new transcription segment 275 1303
THC0290_0160 CDS 198355:201123 - A615 B183 C44 10.22 1.41 Protein of unknown function 276 1301
THC0290_N_0125 3prime 201124:201191 - A1850 B569 C149 8.52 -3.02 new transcription segment 278 3948
THC0290_0161 CDS 201192:202589 - A256 B91 C27 15.07 -1.69 Outer membrane protein precursor, OmpA family P60 279 333
THC0290_N_0126 intra 202620:202692 - A611 B183 C44 9.56 -1.24 new transcription segment 280 1291
THC0290_0162 kbl CDS 202693:203889 - A600 B183 C44 11.28 -1.21 Glycine C-acetyltransferase 281 1071
THC0290_N_0127 5prime 203890:203949 - A439 B165 C44 11.00 -1.21 new transcription segment 282 567
THC0290_0164 sodA CDS 207374:207979 + A1604 B535 C143 12.85 -1.84 Superoxide dismutase [Mn] 285 2887
THC0290_N_0128 3prime 207980:208039 + A1604 B535 C143 8.49 -1.97 new transcription segment 286 2886
THC0290_N_0129 Rfp13 indep 208062:208134 - A1769 B546 C143 12.89 -1.27 new transcription segment 287 3741
THC0290_N_0130 Rfp14 indep 208381:208488 + A1765 B546 C143 9.16 2.09 new transcription segment 288 3520
THC0290_N_0131 3prime 208552:208636 - A958 B303 C83 4.62 -1.02 new transcription segment 289 1898
THC0290_0166 CDS 210086:211081 + A1768 B546 C143 8.30 -1.23 Protein of unknown function 291 3717
THC0290_0167 CDS 211078:211500 - A535 B180 C44 10.20 -1.19 Probable lipoprotein precursor 293 729
THC0290_0172 CDS 216630:217619 - A1083 B365 C107 15.09 1.19 Probable cell surface protein (Leucine-rich repeat protein) precursor 300 2071
THC0290_0173 CDS 217635:218969 - A1083 B365 C107 15.25 1.12 Probable cell surface protein (Leucine-rich repeat protein) precursor 301 2069
THC0290_0174 CDS 219283:220551 - A1083 B365 C107 15.27 1.06 Probable cell surface protein (Leucine-rich repeat protein) precursor 302 2072
THC0290_0176 CDS 221575:222702 - A1083 B365 C107 15.12 1.54 Probable cell surface protein (Leucine-rich repeat protein) precursor 304 2070
THC0290_N_0139 intra 222703:223027 - A1083 B365 C107 14.35 2.38 new transcription segment 305 2065
THC0290_N_0140 repeated_region 224639:224914 - A1083 B365 C107 12.56 2.76 new transcription segment 307 2061
THC0290_0178 CDS 224965:225888 - A1083 B365 C107 14.92 1.14 Probable cell surface protein (Leucine-rich repeat protein) precursor 308 2067
THC0290_0181 CDS 228393:229796 - A1083 B365 C107 14.43 2.36 Probable cell surface protein (Leucine-rich repeat protein) precursor 311 2060
THC0290_N_0142 repeated_region 229797:230072 - A1083 B365 C107 12.69 2.70 new transcription segment 312 2062
THC0290_0182 CDS 230123:231112 - A1083 B365 C107 14.15 2.11 Probable cell surface protein (Leucine-rich repeat protein) precursor 313 2056
THC0290_0183 CDS 231127:232047 - A1083 B365 C107 14.67 1.47 Probable cell surface protein (Leucine-rich repeat protein) precursor 314 2057
THC0290_0184 CDS 232062:233117 - A1083 B365 C107 13.48 1.73 Probable cell surface protein (Leucine-rich repeat protein) precursor 315 2058
THC0290_0185 CDS 233132:234121 - A1088 B365 C107 12.71 1.45 Probable cell surface protein (Leucine-rich repeat protein) precursor 316 2088
THC0290_0186 CDS 234136:235122 - A1088 B365 C107 13.39 2.34 Probable cell surface protein (Leucine-rich repeat protein) precursor 317 2085
THC0290_0187 CDS 235708:236373 + A1765 B546 C143 9.32 2.25 Probable transmembrane protein of unknown function 318 3559
THC0290_N_0144 intra 237144:237208 + A586 B183 C44 9.69 -1.36 new transcription segment 320 914
THC0290_N_0145 3prime 237710:238051 - A489 B173 C44 6.97 1.90 new transcription segment 322 652
THC0290_0192 pnuC CDS 240531:241154 - A491 B173 C44 8.96 1.64 Nicotinamide mononucleotide transporter PnuC 326 654
THC0290_0193 pcrB CDS 241163:241885 - A492 B173 C44 9.58 1.60 PcrB protein homolog 327 655
THC0290_N_0151 3prime-PT 245965:246278 + A1394 B478 C139 7.20 2.89 new transcription segment 337 2568
THC0290_N_0154 3prime 250753:251441 + A1248 B419 C125 10.29 1.35 new transcription segment 342 2356
THC0290_N_0157 intra 251489:251576 - A811 B244 C67 8.38 -1.15 new transcription segment 345 1710
THC0290_0202 purF CDS 251577:253475 - A586 B183 C44 10.46 -1.61 Amidophosphoribosyltransferase 346 915
THC0290_N_0158 3prime 253476:253544 - A811 B244 C67 10.73 -1.95 new transcription segment 347 1711
THC0290_N_0161 5prime 255694:255745 + A103 B45 C16 11.63 -2.76 new transcription segment 353 128
THC0290_0206 acpP CDS 255770:256006 + A562 B183 C44 12.90 -2.21 Acyl carrier protein 354 830
THC0290_N_0163 5prime 256047:256358 + A103 B45 C16 12.92 -1.99 new transcription segment 355 129
THC0290_0207 fabF CDS 256359:257609 + A605 B183 C44 13.46 -1.19 3-oxoacyl-(acyl-carrier-protein) synthase II 356 1219
THC0290_0211 CDS 260540:261250 - A525 B180 C44 10.52 -1.19 Protein of unknown function 362 707
THC0290_N_0167 intra 261251:261325 - A50 B27 C13 7.58 -1.82 new transcription segment 363 57
THC0290_0212 CDS 261326:261682 - A609 B183 C44 7.96 -1.40 Protein of unknown function MmcQ 364 1271
THC0290_0214 CDS 262521:263654 - A609 B183 C44 7.30 -1.57 Probable coproporphyrinogen oxidase 366 1280
THC0290_0215 ruvC CDS 263657:264211 - A890 B276 C76 9.34 -1.91 Crossover junction endoribonuclease 367 1817
THC0290_N_0168 5prime 264212:264278 - A890 B276 C76 9.14 -2.36 new transcription segment 368 1818
THC0290_0216 CDS 264266:265192 + A549 B181 C44 6.97 2.09 Probable transmembrane protein of unknown function 369 791
THC0290_0217 CDS 265180:266289 + A549 B181 C44 7.65 3.02 Glycosyl transferase, group 2 family protein 370 792
THC0290_0218 CDS 266397:266870 - A337 B126 C35 9.48 -1.21 Protein of unknown function 372 437
THC0290_N_0169 Rfp17 indep 266572:266801 + A1747 B546 C143 8.48 2.05 new transcription segment 373 3298
THC0290_0219 CDS 266940:267446 + A1747 B546 C143 8.31 1.95 Hypothetical protein 374 3297
THC0290_0220 CDS 267649:268050 - A1790 B549 C143 10.91 -1.52 Hypothetical protein 376 3842
THC0290_N_0171 intra 268051:268199 - A1790 B549 C143 11.98 -2.05 new transcription segment 377 3845
THC0290_0221 CDS 268200:268898 - A1790 B549 C143 12.92 -2.02 Protein of unknown function precursor 378 3844
THC0290_0222 CDS 268913:269659 - A1762 B546 C143 12.03 -1.58 Protein of unknown function precursor 379 3403
THC0290_N_0172 5prime 273673:273853 + A834 B252 C69 6.81 1.58 new transcription segment 382 1741
THC0290_0226 ygfA CDS 274463:275026 - A1602 B535 C143 8.00 -1.61 5-formyltetrahydrofolate cyclo-ligase 385 2883
THC0290_N_0174 3prime 274463:274834 + A1726 B546 C143 9.21 1.94 new transcription segment 386 3187
THC0290_0227 CDS 275072:276049 - A1440 B501 C142 8.92 -1.37 Protein of unknown function 387 2625
THC0290_0228 uvrC CDS 276133:277932 + A117 B47 C16 8.73 -2.10 Excinuclease ABC, C subunit 388 148
THC0290_0229 CDS 277945:280254 + A117 B47 C16 8.94 -2.20 Probable esterase of the alpha-beta hydrolase superfamily 389 147
THC0290_0233 CDS 284910:285680 + A1257 B421 C125 11.82 1.02 Protein of unknown function precursor 399 2384
THC0290_0234 CDS 285682:286608 + A674 B189 C46 12.55 1.19 Tryptophan 2,3-dioxygenase 400 1450
THC0290_0235 CDS 286622:287854 + A1273 B425 C125 11.32 2.21 Probable M23/M37 family peptidase 401 2411
THC0290_0236 pth CDS 287869:288498 + A1274 B425 C125 11.23 1.93 Aminoacyl-tRNA hydrolase 402 2412
THC0290_N_0181 3prime 292028:292069 - A1100 B369 C108 4.52 -1.33 new transcription segment 404 2121
THC0290_0238 fpp2 CDS 292070:294898 - A1062 B352 C104 14.21 -1.86 Psychrophilic metalloprotease Fpp2 precursor 405 2031
THC0290_0240 bioB CDS 296279:297367 + A600 B183 C44 11.15 -1.57 Biotin synthase 408 1050
THC0290_0241 CDS 297417:297623 - A1450 B502 C142 11.96 -1.28 Biotin synthase 409 2641
THC0290_0243 rbfA CDS 298577:298969 + A1768 B546 C143 11.97 1.32 Ribosome-binding factor A 415 3604
THC0290_0244 CDS 298971:300170 + A1765 B546 C143 12.16 1.86 Probable ABC-type transport system, permease component 416 3519
THC0290_0245 queA CDS 300280:301329 - A1745 B546 C143 13.11 1.31 S-adenosylmethionine:tRNA-ribosyltransferase- isomerase 418 3230
THC0290_N_0187 5prime 301330:301388 - A1745 B546 C143 12.27 1.39 new transcription segment 419 3231
THC0290_0246 aroA CDS 301503:302732 - A601 B183 C44 9.38 1.07 3-phosphoshikimate 1-carboxyvinyltransferase 420 1121
THC0290_0253 dtd CDS 308869:309321 - A714 B202 C53 12.03 -1.10 D-tyrosyl-tRNA(Tyr) deacylase 430 1550
THC0290_N_0192 intra 309322:309431 - A721 B205 C53 12.14 -1.33 new transcription segment 431 1573
THC0290_0254 rsgA CDS 309432:310412 - A721 B205 C53 12.55 -1.21 Putative ribosome biogenesis GTPase RsgA 432 1575
THC0290_N_0193 5prime 310413:310478 - A721 B205 C53 11.64 -1.07 new transcription segment 433 1576
THC0290_0255 CDS 310522:311604 - A721 B205 C53 12.59 -1.20 Putative phospho-2-dehydro-3-deoxyheptonate aldolase 434 1574
THC0290_N_0195 5prime 313769:313939 - A1769 B546 C143 8.07 -1.13 new transcription segment 438 3752
THC0290_0259 CDS 314955:315767 + A628 B183 C44 8.22 1.19 Probable transcriptional regulator, AraC family 440 1351
THC0290_N_0196 intra 315768:315824 + A292 B108 C30 7.26 1.86 new transcription segment 441 377
THC0290_0260 CDS 315825:316994 + A1747 B546 C143 9.65 2.28 Protein of unknown function 442 3291
THC0290_N_0197 3prime 316995:317307 + A1747 B546 C143 10.21 2.14 new transcription segment 443 3293
THC0290_0261 CDS 317564:318664 - A726 B207 C54 9.79 -1.95 Homoserine dehydrogenase 445 1583
THC0290_0262 metX CDS 318651:319652 - A726 B207 C54 9.55 -2.65 Homoserine O-acetyltransferase 446 1584
THC0290_0263 metY CDS 319731:321023 - A726 B207 C54 10.50 -2.19 Probable O-acetylhomoserine aminocarboxypropyltransferase 447 1585
THC0290_N_0198 Rfp20 indep 321293:321392 - A1435 B498 C142 6.89 -4.08 new transcription segment 448 2619
THC0290_0264 CDS 322321:323505 + A1756 B546 C143 7.56 -1.01 Transposase IS91 family 450 3360
THC0290_N_0200 3prime 323909:323965 - A141 B55 C18 6.56 1.51 new transcription segment 452 180
THC0290_0266 CDS 323966:324199 - A1463 B506 C142 8.23 1.56 Transcriptional regulator, XRE family 454 2657
THC0290_0271 CDS 329327:329941 + A1731 B546 C143 8.28 2.33 Truncated Eco57I restriction-modification methylase family protein 460 3199
THC0290_0272 CDS 329944:330672 + A1396 B479 C139 7.58 2.74 Hypothetical protein 461 2570
THC0290_0274 CDS 331155:332150 + A1755 B546 C143 4.99 -1.04 Hypothetical protein 463 3358
THC0290_0275 CDS 332899:333825 - A1862 B574 C149 10.37 -1.93 Protein of unknown function 466 3961
THC0290_0276 CDS 334046:334363 - A1709 B546 C143 12.15 -1.71 Thioredoxin family protein 468 3133
THC0290_N_0207 3prime 334509:334577 - A298 B110 C31 5.10 -2.15 new transcription segment 469 383
THC0290_0277 CDS 334578:335498 - A605 B183 C44 14.10 -1.32 Protein of unknown function precursor, putative outer membrane protein 470 1238
THC0290_0278 CDS 335802:336416 - A22 B12 C5 10.51 -1.11 Probable deoxynucleoside kinase 472 28
THC0290_0279 CDS 336416:337207 - A1671 B543 C143 6.90 1.06 Hypothetical protein precursor 473 3063
THC0290_0280 gene 337415:337477 + A1144 B387 C115 5.36 1.46 Truncated protein N-terminal region 474 2177
THC0290_0283 gene 338551:338808 + A595 B183 C44 7.75 -1.25 Fragment of hypothetical protein (part 1) 477 965
THC0290_0293 CDS 352207:353211 - A59 B31 C14 9.32 -2.46 Protein of unknown function precursor 494 68
THC0290_0295 CDS 355170:355370 + A64 B33 C14 13.30 -1.33 Probable cold shock protein 496 73
THC0290_N_0216 3prime 355371:355427 + A1608 B535 C143 6.85 -2.03 new transcription segment 497 2896
THC0290_0297 CDS 356020:356607 + A1243 B419 C125 10.39 1.86 Protein of unknown function 500 2328
THC0290_0298 dxs CDS 356654:358429 + A1252 B419 C125 10.45 2.27 1-deoxy-D-xylulose-5-phosphate synthase 501 2370
THC0290_0300 CDS 361814:364573 - A1062 B352 C104 12.82 -1.23 Probable M36 fungalysin family metalloprotease precursor 505 2029
THC0290_0301 dgt CDS 364659:366002 - A593 B183 C44 9.54 -1.92 Deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) 506 948
THC0290_N_0221 intra 366003:366148 - A230 B83 C25 10.37 -1.63 new transcription segment 507 300
THC0290_0302 CDS 366149:367459 - A593 B183 C44 9.57 -1.44 Probable penicillin-binding protein precursor 508 949
THC0290_0303 polA CDS 367487:370333 - A447 B166 C44 10.04 -1.24 DNA polymerase I 509 577
THC0290_0306 CDS 372055:372684 - A1049 B346 C102 9.03 -1.45 Probable polysaccharide deacetylase 513 2014
THC0290_N_0223 Rfp23 indep 376405:376471 + A1688 B545 C143 6.52 2.56 new transcription segment 517 3094
THC0290_0310 CDS 376525:379755 - A939 B296 C82 11.55 -1.02 Probable transmembrane protein of unknown function 518 1876
THC0290_N_0227 3prime-PT 380006:380541 + A1168 B401 C121 6.87 2.17 new transcription segment 521 2203
THC0290_0315 CDS 384123:387530 + A1631 B540 C143 9.60 2.65 Protein of unknown function precursor 527 2948
THC0290_0316 CDS 387602:388201 + A1040 B344 C102 13.95 -1.20 Hypothetical protein precursor 528 2001
THC0290_N_0230 intra 388202:388287 + A1040 B344 C102 13.63 -1.70 new transcription segment 529 2002
THC0290_N_0233 repeated_region 391705:392250 + A1768 B546 C143 7.49 1.32 new transcription segment 535 3589
THC0290_N_0235 3prime 393012:393683 - A127 B53 C18 7.64 2.58 new transcription segment 538 160
THC0290_N_0236 intra 395826:395917 + A1767 B546 C143 12.86 -1.09 new transcription segment 543 3573
THC0290_0326 mvaK CDS 395918:396856 + A1669 B542 C143 11.23 -1.03 Mevalonate kinase 544 3056
THC0290_N_0241 3prime 399232:399754 - A1768 B546 C143 7.28 1.66 new transcription segment 551 3593
THC0290_N_0243 5prime 400566:400739 + A1763 B546 C143 10.16 -2.48 new transcription segment 554 3445
THC0290_0336 fbaA CDS 412572:413639 - A593 B183 C44 12.88 -1.19 Fructose-bisphosphate aldolase 560 947
THC0290_N_0247 3prime 416229:416973 - A130 B53 C18 7.30 1.97 new transcription segment 562 164
THC0290_0338 CDS 416249:416977 + A902 B280 C77 8.41 -1.14 Probable tRNA/rRNA methyltransferase 563 1832
THC0290_0340 ubiE CDS 417706:418437 - A68 B33 C14 9.72 -1.15 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE 565 78
THC0290_N_0248 Rfp25 indep 418605:418919 + A1760 B546 C143 10.59 -1.17 new transcription segment 566 3379
THC0290_0341 dfrA CDS 419132:419620 - A566 B183 C44 8.08 -2.22 Dihydrofolate reductase 568 838
THC0290_0342 CDS 419620:419949 - A66 B33 C14 8.79 -2.90 Probable transmembrane protein 569 75
THC0290_0344 thyA CDS 422318:423142 - A605 B183 C44 10.64 -1.25 Thymidylate synthase 571 1253
THC0290_N_0250 intra 423143:423212 - A605 B183 C44 10.48 -1.28 new transcription segment 572 1247
THC0290_0345 CDS 423213:423833 - A605 B183 C44 11.39 -1.27 Protein of unknown function 573 1254
THC0290_N_0251 5prime 423834:424019 - A916 B284 C77 7.93 -1.61 new transcription segment 574 1849
THC0290_0348 pdhB CDS 426192:427169 + A595 B183 C44 12.08 -1.54 Pyruvate dehydrogenase E1 component, beta subunit 580 957
THC0290_N_0254 intra 427170:427297 + A1552 B523 C143 9.99 -1.04 new transcription segment 581 2800
THC0290_N_0258 5prime 436358:436423 - A1555 B525 C143 10.99 1.59 new transcription segment 588 2814
THC0290_0353 gene 436626:437957 - A1203 B413 C124 9.46 3.38 Divergent AAA domain protein 589 2258
THC0290_N_0259 5prime 437958:438171 - A1768 B546 C143 10.60 1.97 new transcription segment 590 3609
THC0290_N_0264 Rfp27 indep 441896:442163 + A1653 B542 C143 5.19 -2.22 new transcription segment 599 3021
THC0290_0363 CDS 445561:446439 - A549 B181 C44 7.92 1.77 Probable drug/metabolite-transporting permease 605 790
THC0290_N_0267 5prime 446871:447017 + A1762 B546 C143 9.96 -1.38 new transcription segment 607 3396
THC0290_0365 CDS 447018:447473 + A1762 B546 C143 10.81 -1.26 Protein of unknown function 608 3385
THC0290_N_0271 3prime 448838:448909 - A1795 B549 C143 12.38 -1.11 new transcription segment 614 3861
THC0290_0370 phoP CDS 453885:454571 + A1767 B546 C143 9.15 -1.47 Two-component system response regulatory protein involved in phosphate regulation 619 3567
THC0290_0374 pstC CDS 458038:459189 + A1492 B512 C143 10.73 1.11 ABC-type phosphate-transport system, permease component PstC 624 2701
THC0290_0375 pstA CDS 459193:460137 + A1492 B512 C143 10.43 1.42 ABC-type phosphate-transport system, permease component PstA 625 2702
THC0290_0376 pstB CDS 460164:460922 + A1492 B512 C143 10.48 1.58 ABC-type phosphate-transport system, ATPase component PstB 626 2703
THC0290_0377 phoU CDS 460961:461689 + A1492 B512 C143 10.34 1.16 Phosphate transport system protein PhoU 627 2704
THC0290_0381 CDS 464505:465146 + A861 B260 C70 9.65 1.49 Probable transmembrane protein of unknown function. Putative amino-acid efflux protein 632 1785
THC0290_0382 ogt2 CDS 465233:465565 + A175 B63 C19 9.01 1.96 Methylated-DNA--[protein]-cysteine S-methyltransferase 633 217
THC0290_N_0276 3prime 465495:465656 - A162 B61 C19 6.89 1.72 new transcription segment 634 202
THC0290_N_0277 3prime 465566:466070 + A132 B53 C18 6.96 2.59 new transcription segment 635 167
THC0290_0396 CDS 482475:482840 - A1161 B397 C120 7.48 3.35 Protein of unknown function 657 2196
THC0290_tRNA_0008 tRNA 483382:483469 - A1769 B546 C143 10.80 -1.47 transfer RNA-Leu 658 3763
THC0290_0397 mutS CDS 483724:486324 - A595 B183 C44 9.17 -2.29 DNA mismatch repair protein MutS 660 953
THC0290_0398 CDS 486474:486992 + A1618 B535 C143 13.08 -2.98 Protein of unknown function precursor 661 2924
THC0290_N_0290 3prime 487606:488796 + A1644 B540 C143 8.19 1.87 new transcription segment 665 2987
THC0290_N_0293 3prime 493383:493951 + A1262 B422 C125 6.99 1.05 new transcription segment 670 2395
THC0290_0403 CDS 493642:494436 - A1768 B546 C143 9.32 -1.44 Protein of unknown function 671 3673
THC0290_N_0294 5prime 494437:494488 - A1552 B523 C143 5.75 -2.79 new transcription segment 672 2805
THC0290_0404 CDS 494527:495138 + A76 B35 C14 8.53 -1.36 Protein of unknown function 673 87
THC0290_0405 CDS 495160:496668 + A558 B183 C44 9.38 -1.05 Protein of unknown function 674 819
THC0290_0406 kdtA (waaA) CDS 496704:497933 - A505 B177 C44 7.57 -1.63 3-deoxy-D-manno-octulosonic-acid transferase 676 674
THC0290_N_0296 5prime 498014:498078 + A334 B125 C35 11.34 -2.54 new transcription segment 677 434
THC0290_0407 porR CDS 498079:499212 + A595 B183 C44 12.27 -1.97 PorR protein, probably involved in biosynthesis of cell surface polysaccharide 678 951
THC0290_N_0297 intra 499213:499323 + A101 B45 C16 11.00 -1.66 new transcription segment 679 124
THC0290_0409 CDS 500600:500857 - A1613 B535 C143 12.90 -2.11 Hypothetical lipoprotein precursor 684 2905
THC0290_N_0301 intra 500882:501008 - A609 B183 C44 10.04 -1.56 new transcription segment 685 1279
THC0290_0410 fabD CDS 501009:501881 - A609 B183 C44 10.25 -1.36 Malonyl CoA-acyl carrier protein transacylase 686 1282
THC0290_0414 aspC1 CDS 503894:505081 - A605 B183 C44 11.77 -1.04 Probable aspartate transaminase AspC1 693 1245
THC0290_0418 apaG CDS 509450:509836 - A1702 B546 C143 12.87 1.27 Protein ApaG 700 3120
THC0290_N_0307 intra 513830:513903 - A461 B168 C44 9.56 1.55 new transcription segment 705 600
THC0290_0423 map CDS 513904:514722 - A1569 B528 C143 12.05 1.09 Methionine aminopeptidase 706 2837
THC0290_0424 CDS 514770:516161 - A1719 B546 C143 10.27 3.89 Probable outer membrane efflux protein precursor 707 3167
THC0290_0425 CDS 516165:517523 - A1719 B546 C143 10.78 3.24 Probable ABC-type transport system, membrane fusion efflux protein component 708 3168
THC0290_0426 CDS 517529:519190 - A1719 B546 C143 10.42 3.11 Probable ABC-type transport system, ATPase and permease components 709 3169
THC0290_0427 CDS 519196:519870 - A1719 B546 C143 8.18 2.63 Probable transcriptional regulator, TetR family 710 3166
THC0290_N_0310 3prime-PT 522214:522414 + A771 B233 C66 7.93 1.25 new transcription segment 714 1656
THC0290_N_0311 intra 524398:524889 + A1765 B546 C143 9.97 2.14 new transcription segment 716 3534
THC0290_0438 thiF CDS 531214:531924 + A728 B209 C54 11.08 1.14 Molybdopterin and thiamine biosynthesis protein 729 1591
THC0290_N_0322 3prime 539143:539314 - A1872 B578 C149 7.86 -1.59 new transcription segment 740 3974
THC0290_0445 CDS 539315:541585 - A1609 B535 C143 8.62 -1.10 Probable Na+/H+ antiporter 742 2897
THC0290_0446 CDS 542293:542667 + A1581 B531 C143 10.68 -2.24 Protein of unknown function 743 2853
THC0290_0451 ilvH CDS 546976:547506 - A1197 B412 C124 9.01 1.84 Acetolactate synthase, small subunit 748 2239
THC0290_0452 ilvB CDS 547513:549207 - A1197 B412 C124 9.01 2.05 Acetolactate synthase, large subunit 749 2242
THC0290_0453 ilvD CDS 549225:550901 - A1197 B412 C124 8.50 2.41 Dihydroxy-acid dehydratase 750 2240
THC0290_0454 ilvE CDS 550915:551790 - A1196 B412 C124 7.61 2.04 Branched-chain-amino-acid transaminase 751 2237
THC0290_N_0328 3prime-PT 553432:553812 + A87 B41 C15 6.49 -1.12 new transcription segment 756 103
THC0290_0462 nrdB CDS 560719:561696 - A879 B271 C74 11.24 -1.09 Ribonucleoside-diphosphate reductase, beta subunit 768 1804
THC0290_N_0336 3prime 564168:564864 + A1252 B419 C125 9.01 2.37 new transcription segment 775 2374
THC0290_N_0337 intra 565788:565860 - A310 B116 C33 10.31 -1.03 new transcription segment 777 395
THC0290_N_0338 intra 566290:566469 - A433 B164 C44 9.08 -1.10 new transcription segment 779 558
THC0290_0469 CDS 566470:567063 - A1444 B502 C142 10.07 -1.17 Probable transmembrane protein of unknown function 781 2630
THC0290_N_0343 5prime 568633:568691 + A962 B306 C84 4.88 1.42 new transcription segment 786 1904
THC0290_0472 CDS 568692:569156 + A784 B238 C67 12.00 1.18 Protein of unknown function 787 1670
THC0290_N_0346 repeated_region 573619:573816 - A1764 B546 C143 9.56 2.66 new transcription segment 791 3450
THC0290_0479 gene 583285:583464 - A1647 B540 C143 12.42 2.53 Truncated transposase IS3 family, central region 804 3004
THC0290_N_0350 repeated_region 583465:583562 - A1718 B546 C143 12.57 1.73 new transcription segment 805 3165
THC0290_0480 CDS 583563:584543 - A1181 B405 C122 12.03 1.97 Probable modification methyltransferase 806 2218
THC0290_0481 CDS 584540:585397 - A1718 B546 C143 12.01 1.35 Probable type II restriction endonuclease 807 3164
THC0290_N_0351 repeated_region 585398:586012 - A1765 B546 C143 9.96 1.99 new transcription segment 808 3522
THC0290_0482 CDS 586087:587670 + A1765 B546 C143 9.84 4.14 Transposase IS1182 family 809 3526
THC0290_N_0354 5prime 589619:589720 - A1747 B546 C143 8.63 1.69 new transcription segment 814 3300
THC0290_0485 CDS 589753:591324 + A1765 B546 C143 10.47 3.68 Transposase IS1182 family 815 3527
THC0290_0487 CDS 592935:594287 + A841 B255 C69 9.47 -1.45 Protein of unknown function 817 1757
THC0290_N_0356 3prime 596351:596476 - A262 B93 C27 10.03 -2.38 new transcription segment 821 344
THC0290_0490 CDS 596477:596959 - A263 B94 C27 11.84 -1.30 Hypothetical lipoprotein precursor 822 345
THC0290_0491 fcpB CDS 596971:598155 - A263 B94 C27 12.48 -1.55 Streptopain family cystein protease precursor 823 346
THC0290_N_0359 repeated_region 600712:600785 - A956 B302 C82 6.82 -1.53 new transcription segment 828 1896
THC0290_0495 CDS 601377:601946 - A1737 B546 C143 5.82 2.83 Hypothetical protein 830 3210
THC0290_0496 gene 601969:602310 + A1765 B546 C143 10.06 3.63 Truncated transposase IS1182 family 831 3525
THC0290_0502 CDS 608390:609994 + A1765 B546 C143 10.09 4.02 Transposase IS1182 family 839 3528
THC0290_N_0363 repeated_region 609996:610101 - A1765 B546 C143 12.03 1.85 new transcription segment 840 3535
THC0290_0503 CDS 610102:610602 - A1765 B546 C143 10.86 1.83 Protein of unknown function precursor 841 3544
THC0290_N_0364 5prime 610603:610665 - A1764 B546 C143 11.32 1.66 new transcription segment 842 3452
THC0290_0504 CDS 611442:612659 + A1765 B546 C143 9.97 1.27 Probable transposase 843 3543
THC0290_N_0366 intra 613818:613961 + A1818 B557 C145 6.99 1.23 new transcription segment 846 3909
THC0290_N_0367 repeated_region 614486:614829 - A1768 B546 C143 6.50 3.57 new transcription segment 849 3600
THC0290_0508 CDS 614830:615714 - A1747 B546 C143 11.79 1.29 Transposase IS982 family 850 3255
THC0290_N_0368 repeated_region 615707:616002 + A1768 B546 C143 9.10 1.41 new transcription segment 851 3621
THC0290_0509 gene 616003:617439 + A1253 B419 C125 7.28 3.11 Truncated protein of unknown function, C-terminal region 852 2376
THC0290_0511 CDS 620053:621324 + A646 B183 C44 9.41 1.07 Probable modification methyltransferase 855 1410
THC0290_0513 CDS 626217:629510 + A364 B138 C39 7.79 1.97 Probable type I restriction endonuclease 857 465
THC0290_0514 CDS 629601:630056 + A364 B138 C39 7.38 2.88 Protein of unknown function 858 466
THC0290_0515 CDS 630235:632664 + A363 B138 C39 8.55 1.36 Protein of unknown function 860 464
THC0290_N_0372 repeated_region 633986:634186 - A1765 B546 C143 10.05 2.91 new transcription segment 863 3515
THC0290_0517 CDS 634225:634386 - A1765 B546 C143 10.55 3.44 Hypothetical protein 864 3514
THC0290_N_0373 intra 634387:634452 - A1765 B546 C143 12.77 2.89 new transcription segment 865 3513
THC0290_0518 CDS 634453:634626 - A1765 B546 C143 12.53 2.90 Conserved protein of unknown function 866 3512
THC0290_N_0374 intra 634627:634806 - A1765 B546 C143 11.71 3.25 new transcription segment 867 3511
THC0290_0519 CDS 634807:635154 - A1765 B546 C143 12.25 3.54 Conserved protein of unknown function 869 3504
THC0290_0520 CDS 635151:635951 - A1765 B546 C143 12.06 3.29 Probable transcriptional regulator 870 3505
THC0290_N_0376 3prime 640464:640566 - A1765 B546 C143 12.77 1.31 new transcription segment 875 3536
THC0290_N_0377 repeated_region 641242:642097 - A1252 B419 C125 10.56 1.84 new transcription segment 877 2368
THC0290_0526 CDS 642217:643776 + A1765 B546 C143 9.89 4.13 Transposase IS1182 family 878 3529
THC0290_N_0379 repeated_region 645195:645300 - A1765 B546 C143 11.32 1.76 new transcription segment 881 3537
THC0290_0528 CDS 645301:645954 - A1203 B413 C124 9.13 4.16 Probable phosphatase/phosphohexomutase 882 2257
THC0290_N_0380 intra 645955:646130 - A1203 B413 C124 9.71 3.64 new transcription segment 883 2259
THC0290_0529 CDS 646131:646511 - A669 B187 C46 10.02 3.28 Hypothetical protein 884 1443
THC0290_N_0381 repeated_region 646512:647059 - A1765 B546 C143 11.26 1.45 new transcription segment 885 3457
THC0290_0530 CDS 647060:648847 - A669 B187 C46 11.11 2.99 Probable S41 family peptidase precursor 886 1444
THC0290_N_0382 intra 648848:649035 - A1182 B405 C122 10.39 2.51 new transcription segment 887 2219
THC0290_0531 CDS 649036:649524 - A1400 B480 C139 11.08 2.46 Protein of unknown function 888 2574
THC0290_0532 CDS 649528:650709 - A1731 B546 C143 10.33 2.51 Probable plasmid maintenance system antidote protein 889 3197
THC0290_0533 CDS 650947:651456 - A1170 B402 C122 11.88 1.06 Hypothetical protein 891 2205
THC0290_0535 CDS 651989:652948 - A1632 B540 C143 12.31 1.04 Protein of unknown function 894 2950
THC0290_0536 CDS 652945:653490 - A1632 B540 C143 11.95 2.09 Hypothetical transmembrane protein 895 2951
THC0290_N_0386 repeated_region 653742:653834 - A1765 B546 C143 12.10 1.53 new transcription segment 897 3518
THC0290_0537 CDS 653835:655004 - A1630 B540 C143 12.45 1.19 Protein of unknown function 898 2947
THC0290_N_0387 5prime 655005:655084 - A1765 B546 C143 13.07 1.19 new transcription segment 899 3548
THC0290_N_0388 repeated_region 655785:656570 - A1252 B419 C125 9.96 2.69 new transcription segment 901 2367
THC0290_0539 CDS 656571:656978 - A1675 B543 C143 10.40 1.33 Hypothetical protein 902 3078
THC0290_N_0390 Rfp30 indep 658610:658815 + A1762 B546 C143 9.95 -1.21 new transcription segment 906 3412
THC0290_0543 CDS 660017:661417 - A1252 B419 C125 9.18 3.26 Hypothetical protein 910 2373
THC0290_N_0394 repeated_region 661670:662043 + A1749 B546 C143 9.58 3.95 new transcription segment 912 3323
THC0290_0544 CDS 662247:663131 + A1747 B546 C143 11.75 1.28 Transposase IS982 family 913 3257
THC0290_0545 CDS 663927:664523 - A1739 B546 C143 5.26 1.89 Hypothetical protein 914 3214
THC0290_0546 CDS 664709:665848 - A1253 B419 C125 5.93 2.85 Restriction endonuclease 915 2377
THC0290_0547 gene 665845:666240 - A1731 B546 C143 6.63 3.55 Truncated cytosine-specific modification methyltransferase, C-terminal region 916 3200
THC0290_N_0395 repeated_region 666241:666640 - A1768 B546 C143 8.44 1.85 new transcription segment 917 3576
THC0290_0548 CDS 666641:667414 - A1303 B443 C129 9.33 1.23 Protein of unknown function 919 2445
THC0290_N_0396 intra 668261:668748 - A1765 B546 C143 8.44 1.55 new transcription segment 921 3545
THC0290_0550 CDS 668749:669369 - A1765 B546 C143 10.58 1.17 Protein of unknown function 922 3546
THC0290_N_0397 repeated_region 669370:670142 - A1765 B546 C143 9.56 2.80 new transcription segment 923 3523
THC0290_0551 CDS 670143:673139 - A1211 B415 C124 8.74 1.15 Putative DNA or RNA helicase 924 2271
THC0290_N_0400 repeated_region 676790:676957 - A850 B256 C70 8.24 1.09 new transcription segment 930 1770
THC0290_N_0403 intra 681237:681325 - A168 B62 C19 7.92 1.67 new transcription segment 937 209
THC0290_0559 CDS 681326:681646 - A1210 B415 C124 8.61 1.06 Protein of unknown function 938 2269
THC0290_0560 CDS 681664:682242 - A1210 B415 C124 8.43 1.21 Protein of unknown function 939 2270
THC0290_0561 CDS 682255:683376 - A1765 B546 C143 8.87 1.44 Hypothetical protein 940 3471
THC0290_N_0404 repeated_region 683377:684734 - A1252 B419 C125 10.51 2.33 new transcription segment 941 2369
THC0290_0562 CDS 684806:685303 - A49 B27 C13 7.86 -1.83 Protein of unknown function 942 56
THC0290_0563 CDS 685304:686401 - A55 B29 C13 8.29 -1.86 Protein of unknown function 943 63
THC0290_N_0405 intra 686402:686639 - A54 B29 C13 6.65 -2.08 new transcription segment 944 62
THC0290_0564 CDS 686640:687575 - A55 B29 C13 7.20 -2.44 Hypothetical protein 945 64
THC0290_N_0406 5prime 687576:687677 - A1484 B508 C142 8.32 -1.11 new transcription segment 946 2689
THC0290_N_0412 repeated_region 696397:696658 - A1768 B546 C143 10.16 1.48 new transcription segment 959 3592
THC0290_N_0413 intra 696660:696739 - A1732 B546 C143 8.46 3.50 new transcription segment 960 3202
THC0290_0572 CDS 696740:697474 - A1200 B413 C124 8.19 3.16 Hypothetical lipoprotein precursor 961 2252
THC0290_N_0414 repeated_region 697475:697762 - A1200 B413 C124 10.60 1.49 new transcription segment 962 2251
THC0290_0573 CDS 697763:698500 - A1200 B413 C124 9.05 2.64 Hypothetical protein 963 2253
THC0290_N_0415 repeated_region 698501:698961 - A1765 B546 C143 11.76 1.18 new transcription segment 964 3454
THC0290_0574 CDS 698962:700197 - A1191 B409 C123 11.30 1.35 Major facilitator superfamily (MFS) permease 965 2231
THC0290_N_0416 intra 700198:700330 - A1697 B546 C143 10.64 1.68 new transcription segment 966 3109
THC0290_0575 CDS 700331:701341 - A1201 B413 C124 10.31 2.51 Transposase IS3 family 967 2254
THC0290_0576 CDS 701362:701715 - A1155 B394 C120 10.81 1.67 Transposase IS3 family 968 2188
THC0290_N_0417 repeated_region 701716:701820 - A1155 B394 C120 11.25 1.70 new transcription segment 969 2189
THC0290_N_0419 repeated_region 701857:702286 - A1722 B546 C143 10.74 1.20 new transcription segment 970 3180
THC0290_0579 CDS 704607:705650 - A1050 B346 C102 10.80 -1.11 Integrase/recombinase 974 2015
THC0290_0580 gpmI CDS 706024:707541 - A427 B164 C44 11.03 -1.10 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 976 550
THC0290_N_0422 5prime 707542:707627 - A883 B273 C75 7.60 1.15 new transcription segment 977 1809
THC0290_0581 CDS 707782:708492 + A1765 B546 C143 10.44 2.56 Protein of unknown function 979 3501
THC0290_N_0423 3prime 708013:708480 - A1222 B417 C125 7.66 1.94 new transcription segment 980 2290
THC0290_N_0424 3prime 708493:708688 + A1645 B540 C143 9.61 4.14 new transcription segment 982 2997
THC0290_N_0425 3prime-PT 708689:709190 + A1645 B540 C143 9.28 4.87 new transcription segment 983 2998
THC0290_0583 yitI CDS 710191:710622 - A1243 B419 C125 10.79 1.72 Acetyltransferase, GNAT family, YitI 984 2327
THC0290_N_0426 3prime-PT 710623:710986 - A1037 B342 C102 6.90 -3.15 new transcription segment 985 1997
THC0290_N_0427 5prime 710823:710903 + A1183 B406 C122 7.35 4.41 new transcription segment 986 2220
THC0290_0584 pepE CDS 711012:711719 - A1035 B342 C102 10.42 -2.72 Dipeptidase E 988 1990
THC0290_0585 CDS 711836:712555 + A1348 B467 C136 6.77 1.29 Protein of unknown function precursor 989 2501
THC0290_N_0430 3prime 715403:715513 - A1149 B391 C118 8.23 1.96 new transcription segment 992 2182
THC0290_0588 CDS 715514:716959 - A552 B181 C44 9.71 1.92 Probable amino acid-transporting permease 993 796
THC0290_0591 maeB CDS 719251:721566 + A605 B183 C44 11.20 -1.22 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) 997 1222
THC0290_N_0433 intra 729464:729774 + A664 B187 C46 9.38 1.19 new transcription segment 1001 1438
THC0290_0595 gcvH CDS 730973:731353 + A600 B183 C44 12.54 -2.12 Glycine cleavage system H protein 1005 1044
THC0290_N_0436 intra 731354:731426 + A600 B183 C44 12.24 -2.31 new transcription segment 1006 1047
THC0290_0596 fjo27 CDS 731427:731732 + A600 B183 C44 12.36 -2.27 Conserved membrane protein of unknown function 1007 1046
THC0290_0597 deoC CDS 731804:732547 + A600 B183 C44 9.35 -2.47 Deoxyribose-phosphate aldolase 1008 1051
THC0290_0598 CDS 732558:734672 + A600 B183 C44 8.96 -1.25 Uncharacterized protein 1009 1048
THC0290_N_0441 3prime 739332:739567 + A1420 B491 C140 8.43 -1.35 new transcription segment 1017 2602
THC0290_0609 cyoE CDS 743756:744658 - A788 B239 C67 9.23 1.15 Protoheme IX farnesyltransferase 1026 1677
THC0290_N_0444 3prime 745438:745510 - A1762 B546 C143 14.98 -1.14 new transcription segment 1028 3393
THC0290_N_0447 3prime 751085:752281 + A1248 B419 C125 9.51 1.37 new transcription segment 1037 2361
THC0290_N_0454 3prime-PT 761018:761188 + A148 B58 C19 6.84 1.33 new transcription segment 1054 187
THC0290_N_0456 3prime 763612:763681 + A1402 B481 C139 9.82 1.20 new transcription segment 1059 2576
THC0290_0632 CDS 767506:767874 + A1745 B546 C143 11.10 1.07 Putative Sec-independent protein translocase (twin-arginine translocation protein) 1068 3239
THC0290_0633 CDS 767874:768443 + A1158 B395 C120 10.07 2.85 Probable membrane-associated phospholipid phosphatase 1069 2192
THC0290_N_0462 3prime 768085:768500 - A1646 B540 C143 7.78 2.42 new transcription segment 1070 3003
THC0290_N_0463 3prime 768444:768788 + A1158 B395 C120 8.54 4.76 new transcription segment 1071 2193
THC0290_N_0464 Rfp33 indep 768887:769220 + A1201 B413 C124 8.46 5.08 new transcription segment 1073 2255
THC0290_0638 CDS 772469:773029 + A1710 B546 C143 9.16 2.44 RNA polymerase ECF-type sigma factor 1078 3144
THC0290_0639 CDS 773016:773693 + A1710 B546 C143 9.35 2.18 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1079 3145
THC0290_0640 CDS 773726:774790 + A1783 B548 C143 10.84 1.50 Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor 1080 3832
THC0290_0641 CDS 774935:776176 + A1162 B397 C120 10.01 1.39 Protein of unknown function precursor 1081 2197
THC0290_0644 CDS 779789:780418 - A1768 B546 C143 8.85 -2.57 Two-component system response regulatory protein, LuxR family 1087 3728
THC0290_N_0469 intra 780456:780505 - A594 B183 C44 5.23 -2.49 new transcription segment 1088 950
THC0290_0645 nadE CDS 780506:781312 - A1438 B500 C142 9.88 -1.35 NH(3)-dependent NAD(+) synthetase 1089 2623
THC0290_N_0470 5prime 781374:781453 + A1767 B546 C143 7.78 -1.64 new transcription segment 1091 3571
THC0290_0652 CDS 785967:786308 + A1192 B409 C123 11.32 1.46 Probable transmembrane protein of unknown function 1101 2232
THC0290_0653 ftsI CDS 786299:788302 + A1192 B409 C123 11.75 2.08 Peptidoglycan glycosyltransferase FtsI 1102 2233
THC0290_0654 murE CDS 788304:789764 + A467 B169 C44 11.87 1.22 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1103 613
THC0290_N_0474 intra 789765:789827 + A465 B169 C44 7.69 2.06 new transcription segment 1104 607
THC0290_0658 murG CDS 793797:794900 + A467 B169 C44 10.61 1.73 Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1110 610
THC0290_N_0480 intra 800444:800556 + A748 B217 C57 10.74 -1.15 new transcription segment 1116 1622
THC0290_N_0481 5prime 800558:800772 + A901 B280 C77 10.10 -1.08 new transcription segment 1118 1831
THC0290_N_0482 intra 801223:801292 + A917 B284 C77 5.07 -2.36 new transcription segment 1120 1850
THC0290_0664 CDS 801393:802211 + A175 B63 C19 8.88 1.93 Probable transmembrane protein of unknown function 1122 218
THC0290_N_0483 3prime 801868:802199 - A780 B237 C67 8.04 4.75 new transcription segment 1123 1666
THC0290_0665 rpe CDS 802200:802859 - A26 B13 C6 12.66 1.34 Ribulose-phosphate 3-epimerase 1124 32
THC0290_N_0484 3prime 802212:803155 + A1248 B419 C125 7.89 1.53 new transcription segment 1125 2359
THC0290_N_0485 3prime 803148:803240 - A1242 B419 C125 11.83 5.32 new transcription segment 1127 2320
THC0290_N_0486 Rfp35 indep 803241:803318 - A1641 B540 C143 11.83 3.03 new transcription segment 1128 2980
THC0290_0666 rpoD CDS 803319:804182 - A1641 B540 C143 14.21 2.15 RNA polymerase sigma-70 factor RpoD 1129 2979
THC0290_N_0487 3prime 804893:804980 - A942 B298 C82 4.57 -1.09 new transcription segment 1131 1881
THC0290_0681 CDS 817138:819144 + A1674 B543 C143 9.05 1.09 Probable TonB-dependent outer membrane receptor precursor 1148 3071
THC0290_0682 CDS 819184:819525 + A1674 B543 C143 10.68 1.17 Protein of unknown function 1149 3069
THC0290_N_0497 intra 819907:819970 + A1674 B543 C143 9.23 2.40 new transcription segment 1151 3075
THC0290_0684 sulP CDS 819971:821572 + A1674 B543 C143 10.75 2.77 Probable sulfate permease 1152 3076
THC0290_0685 cynT CDS 821595:822230 + A1674 B543 C143 11.26 1.27 Carbonic anhydrase 1153 3077
THC0290_0688 CDS 823730:824341 - A1449 B502 C142 10.39 -1.36 Probable hydrolase (HAD superfamily) 1157 2639
THC0290_0690 yjgM CDS 825397:825891 + A1473 B507 C142 7.99 -2.19 Probable acetyltransferase YjgM 1159 2669
THC0290_0691 hemK CDS 825894:826751 + A42 B25 C13 7.96 -1.81 Methylase of polypeptide chain release factors 1160 49
THC0290_N_0500 3prime 826538:826787 - A1169 B401 C121 8.64 3.77 new transcription segment 1161 2204
THC0290_0692 CDS 826788:828029 - A1747 B546 C143 10.28 2.24 Probable ABC-type transport system, permease component 1162 3294
THC0290_N_0503 3prime 829746:830044 + A175 B63 C19 8.24 1.80 new transcription segment 1167 219
THC0290_0695 fspA CDS 830831:831442 - A618 B183 C44 14.66 -1.38 Flavobacterial-specific protein antigen FspA precursor 1170 1320
THC0290_0696 aroQ CDS 831952:832365 + A1592 B534 C143 9.71 -1.24 3-dehydroquinate dehydratase 1171 2865
THC0290_N_0510 Rfp36 indep 840044:840245 - A1244 B419 C125 9.41 2.01 new transcription segment 1183 2343
THC0290_0706 hupB CDS 844064:844339 + A259 B91 C27 14.36 -1.33 Histone-like bacterial DNA-binding protein HU-beta 1189 340
THC0290_N_0516 3prime 844739:845012 - A1684 B545 C143 7.52 1.78 new transcription segment 1191 3087
THC0290_N_0517 3prime 845017:845453 + A1643 B540 C143 9.20 2.25 new transcription segment 1193 2986
THC0290_0709 CDS 845862:846254 - A66 B33 C14 11.30 -2.06 Protein of unknown function 1194 76
THC0290_tRNA_0014 tRNA 846398:846474 + A1769 B546 C143 11.21 1.28 transfer RNA-Met 1195 3778
THC0290_N_0519 3prime 846486:846777 - A595 B183 C44 11.09 -2.01 new transcription segment 1196 956
THC0290_N_0520 3prime-PT 846502:846820 + A968 B307 C84 6.67 1.69 new transcription segment 1197 1913
THC0290_0710 ribH CDS 846778:847347 - A600 B183 C44 10.42 -1.64 Riboflavin synthase, beta subunit 1198 1103
THC0290_N_0521 intra 847348:847417 - A454 B168 C44 8.12 -1.88 new transcription segment 1199 589
THC0290_N_0523 5prime 854021:854077 + A267 B95 C28 10.06 -1.10 new transcription segment 1207 350
THC0290_0719 CDS 855911:856366 - A988 B312 C84 7.29 -1.16 Probable rRNA methyltransferase 1211 1943
THC0290_0720 CDS 856373:856993 - A804 B244 C67 6.33 -1.77 Pseudouridylate synthase 1212 1700
THC0290_0721 rmuC CDS 857058:858404 + A1473 B507 C142 8.61 -2.23 DNA recombination protein RmuC 1213 2670
THC0290_0722 CDS 858412:858780 + A1441 B501 C142 10.04 -1.72 Protein of unknown function precursor 1214 2626
THC0290_0723 CDS 858781:859326 + A185 B67 C21 8.78 -1.55 Acyl-CoA hydrolase family protein 1215 231
THC0290_0724 irk CDS 859337:860293 - A1604 B535 C143 7.34 -2.05 Inward rectifier potassium channel Irk 1217 2888
THC0290_0725 carB CDS 860354:863206 - A787 B239 C67 9.62 1.70 Carbamoyl-phosphate synthase large subunit 1218 1675
THC0290_N_0526 intra 863207:863394 - A787 B239 C67 9.02 2.10 new transcription segment 1219 1676
THC0290_N_0531 3prime 867274:867320 - A391 B149 C42 8.40 -1.64 new transcription segment 1228 501
THC0290_0731 CDS 867699:868541 - A1173 B404 C122 10.73 1.33 Protein of unknown function 1230 2209
THC0290_N_0532 intra 868542:868640 - A1013 B322 C87 11.81 1.52 new transcription segment 1231 1968
THC0290_0732 CDS 868641:869144 - A1199 B413 C124 11.61 1.28 Probable lipoprotein precursor. Putative lipopolysaccharide assembly protein LptE 1232 2247
THC0290_N_0533 intra 869145:869218 - A1199 B413 C124 11.08 1.68 new transcription segment 1233 2248
THC0290_0733 CDS 869219:870475 - A1199 B413 C124 12.23 1.62 Probable sigma-54-dependent transcriptional regulator 1234 2249
THC0290_N_0534 5prime 870476:870543 - A1199 B413 C124 11.51 2.07 new transcription segment 1235 2250
THC0290_N_0535 intra 870545:870960 - A1199 B413 C124 10.78 2.97 new transcription segment 1236 2246
THC0290_0734 miaB CDS 870961:872406 - A1747 B546 C143 11.97 2.14 Probable TRNA-i(6)A37 modification enzyme MiaB 1237 3292
THC0290_N_0536 3prime 872624:872743 - A1802 B553 C144 5.17 -1.42 new transcription segment 1238 3889
THC0290_0735 remH CDS 872744:873166 - A256 B91 C27 12.74 -1.05 Gliding motility protein RemH precursor 1239 334
THC0290_0736 CDS 873196:873774 - A256 B91 C27 12.57 -1.14 Protein of unknown function precursor 1240 335
THC0290_N_0542 3prime 883959:884947 - A1246 B419 C125 8.55 2.56 new transcription segment 1252 2352
THC0290_N_0544 3prime 887134:887639 - A132 B53 C18 6.54 1.97 new transcription segment 1257 168
THC0290_0748 CDS 889267:890505 + A1750 B546 C143 10.94 1.25 Probable type II cytosine-specific modification methyltransferase 1261 3330
THC0290_0749 CDS 890481:891245 - A102 B45 C16 8.16 -1.60 Probable type II restriction enzyme 1263 125
THC0290_N_0548 3prime 890506:891130 + A1218 B416 C125 8.72 3.53 new transcription segment 1264 2284
THC0290_N_0551 Rfp37 indep 892388:892599 + A1598 B535 C143 6.21 -2.04 new transcription segment 1268 2875
THC0290_tRNA_0015 tRNA 892642:892717 - A1769 B546 C143 12.07 -1.35 transfer RNA-Met 1269 3779
THC0290_tRNA_0016 tRNA 892749:892824 - A1769 B546 C143 11.95 -1.35 transfer RNA-Met 1270 3780
THC0290_N_0552 5prime 893017:893063 + A1478 B507 C142 5.85 -2.71 new transcription segment 1271 2679
THC0290_0753 CDS 895795:896361 + A1459 B505 C142 10.30 -1.37 Protein of unknown function 1276 2653
THC0290_0754 CDS 896547:899900 + A1794 B549 C143 13.43 1.46 Protein of unknown function precursor, putative adhesin 1278 3851
THC0290_N_0555 3prime 899901:900114 + A1794 B549 C143 13.01 1.16 new transcription segment 1279 3852
THC0290_N_0556 5prime 900417:900873 + A1604 B535 C143 10.38 -2.61 new transcription segment 1281 2891
THC0290_0756 hutU CDS 900874:902856 + A236 B84 C26 11.46 -1.78 Urocanate hydratase 1282 309
THC0290_N_0557 intra 902857:903025 + A223 B83 C25 7.71 -2.74 new transcription segment 1283 285
THC0290_0757 CDS 903026:904129 + A232 B83 C25 11.48 -1.34 Protein of unknown function 1285 304
THC0290_0760 CDS 906571:907191 - A77 B35 C14 8.00 -2.33 Protein of unknown function 1290 89
THC0290_0761 CDS 907194:908144 - A89 B42 C16 7.19 -2.52 Protein of unknown function 1291 105
THC0290_N_0560 Rfp38 indep 907245:908039 + A1238 B419 C125 6.94 2.48 new transcription segment 1292 2312
THC0290_0763 CDS 909139:910893 + A1357 B469 C136 8.85 -1.38 Probable ABC-type multidrug transport system, ATPase and permease components 1296 2517
THC0290_N_0564 Rfp39 indep 913998:914265 + A1768 B546 C143 6.85 1.50 new transcription segment 1301 3685
THC0290_0773 gene 921206:921964 + A138 B54 C18 6.04 3.46 Truncated transposase (fragment) 1314 176
THC0290_0774 CDS 922230:925658 - A1772 B546 C143 10.06 -1.23 Methylmalonyl-CoA mutase 1316 3796
THC0290_N_0572 intra 926563:926969 + A1648 B540 C143 10.54 1.12 new transcription segment 1319 3008
THC0290_0777 CDS 926970:927692 + A1244 B419 C125 11.16 1.64 Protein of unknown function precursor 1320 2345
THC0290_N_0573 Rfp40 indep 927787:927860 + A1768 B546 C143 7.65 2.93 new transcription segment 1321 3602
THC0290_0779 CDS 928488:929126 + A1765 B546 C143 9.64 1.31 Probable pyrophosphohydrolase 1324 3550
THC0290_N_0575 3prime 929531:929992 - A1226 B417 C125 8.61 3.18 new transcription segment 1326 2297
THC0290_0781 CDS 929993:930601 - A1232 B419 C125 9.22 1.46 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1327 2305
THC0290_0783 ndh CDS 931324:932628 + A104 B45 C16 8.46 -2.76 NADH dehydrogenase 1330 130
THC0290_0785 pepD CDS 933779:935242 + A1358 B469 C136 12.58 -1.41 Xaa-His dipeptidase 1332 2519
THC0290_N_0576 3prime 935243:935309 + A1855 B570 C149 12.01 -2.18 new transcription segment 1333 3953
THC0290_N_0580 intra 941000:941283 + A667 B187 C46 11.81 1.44 new transcription segment 1342 1441
THC0290_0791 CDS 941284:942165 + A1271 B425 C125 11.61 1.25 Protein of unknown function 1343 2405
THC0290_N_0581 repeated_region 942166:942314 + A866 B262 C70 9.29 1.41 new transcription segment 1344 1791
THC0290_N_0582 3prime 943455:943570 - A1646 B540 C143 10.49 2.64 new transcription segment 1346 3000
THC0290_0793 CDS 943571:944119 - A1088 B365 C107 10.44 1.98 Probable transmembrane protein of unknown function 1347 2094
THC0290_0794 fhuA CDS 944125:946380 - A1088 B365 C107 11.40 1.72 Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA 1348 2095
THC0290_0795 prfA CDS 947122:948195 + A976 B308 C84 11.61 1.62 Peptide chain release factor 1 (RF-1) 1350 1925
THC0290_N_0583 intra 948196:948325 + A976 B308 C84 11.14 1.80 new transcription segment 1351 1926
THC0290_0798 CDS 952449:953249 - A529 B180 C44 6.90 -1.27 Hypothetical protein 1357 717
THC0290_0799 miaA CDS 953303:954226 - A233 B83 C25 8.68 -1.53 tRNA isopentenyltransferase 1358 305
THC0290_N_0587 intra 954227:954368 - A225 B83 C25 9.74 -1.29 new transcription segment 1359 287
THC0290_N_0593 3prime 965318:965499 - A1747 B546 C143 7.21 1.17 new transcription segment 1376 3273
THC0290_N_0594 3prime 965520:966173 + A1268 B423 C125 7.83 2.47 new transcription segment 1378 2401
THC0290_N_0595 5prime 966766:966843 + A1764 B546 C143 12.30 2.99 new transcription segment 1379 3451
THC0290_0811 CDS 966844:967311 + A1243 B419 C125 13.26 2.62 Putative muramidase 1380 2323
THC0290_N_0596 3prime 967312:967505 + A1243 B419 C125 11.99 2.64 new transcription segment 1381 2324
THC0290_0812 fur CDS 967831:968283 + A1764 B546 C143 12.04 2.02 Ferric iron uptake transcription regulator, Fur 1382 3449
THC0290_N_0597 intra 968284:968363 + A1215 B416 C125 13.52 1.98 new transcription segment 1383 2280
THC0290_0813 purA CDS 968364:969635 + A1215 B416 C125 12.51 1.83 Adenylosuccinate synthase 1384 2279
THC0290_0819 CDS 975646:977562 - A674 B189 C46 11.82 1.44 LysM domain protein precursor 1392 1452
THC0290_N_0601 Rfp42 indep 976566:976680 + A1248 B419 C125 7.51 1.99 new transcription segment 1393 2355
THC0290_0828 CDS 988051:988332 - A1762 B546 C143 13.17 -1.04 Protein of unknown function 1405 3391
THC0290_0830 CDS 989155:989379 - A1671 B543 C143 6.97 2.01 Protein of unknown function 1407 3064
THC0290_N_0607 3prime 989897:990214 + A1217 B416 C125 10.75 2.04 new transcription segment 1409 2282
THC0290_N_0612 3prime-PT 994437:994783 + A1732 B546 C143 8.27 3.99 new transcription segment 1418 3203
THC0290_N_0615 3prime-PT 996138:998041 + A1535 B521 C143 7.74 1.70 new transcription segment 1420 2776
THC0290_0837 wzxE CDS 996345:997619 - A327 B122 C33 7.21 3.89 Putative lipopolysaccharide biosynthesis protein WzxE 1421 414
THC0290_0838 CDS 997620:998723 - A327 B122 C33 9.64 3.18 Probable aminotransferase involved in lipopolysaccharide biosynthesis 1422 415
THC0290_0839 CDS 998720:999697 - A779 B237 C67 10.31 3.49 Protein of unknown function 1423 1665
THC0290_N_0616 intra 999713:999921 - A1007 B320 C87 8.04 2.53 new transcription segment 1424 1962
THC0290_0841 CDS 1000821:1001609 + A448 B166 C44 10.13 -1.96 Probable tRNA/rRNA methyltransferase 1426 578
THC0290_N_0617 3prime 1004055:1004461 + A1178 B404 C122 8.52 3.46 new transcription segment 1429 2215
THC0290_N_0618 3prime 1006936:1007642 + A1184 B406 C122 8.37 3.03 new transcription segment 1434 2221
THC0290_0848 yydA CDS 1008755:1009228 - A1619 B535 C143 8.06 -2.34 Protein of unknown function YydA 1436 2926
THC0290_0850 yjeB CDS 1009520:1009939 - A894 B277 C76 5.60 -2.06 Protein of unknown function YjeB 1438 1822
THC0290_0851 hmp CDS 1009947:1011152 - A936 B294 C81 6.79 -2.38 Nitric oxide dioxygenase 1440 1873
THC0290_0852 nadC CDS 1011355:1012212 + A525 B180 C44 9.57 -1.92 Nicotinate-nucleotide diphosphorylase (carboxylating) 1441 708
THC0290_N_0621 3prime 1016422:1016591 - A1765 B546 C143 13.06 1.54 new transcription segment 1446 3553
THC0290_0857 rpsF CDS 1017453:1017794 + A542 B180 C44 12.50 -1.35 30S ribosomal protein S6 1449 760
THC0290_0858 rpsR CDS 1017800:1018096 + A542 B180 C44 13.51 -1.46 30S ribosomal protein S18 1450 761
THC0290_N_0623 intra 1018097:1018161 + A542 B180 C44 14.68 -1.33 new transcription segment 1451 759
THC0290_0859 rplI CDS 1018162:1018605 + A542 B180 C44 12.03 -1.18 50S ribosomal protein L9 1452 757
THC0290_N_0625 intra 1018645:1018746 + A810 B244 C67 5.49 -1.69 new transcription segment 1453 1709
THC0290_0862 CDS 1021380:1022075 + A1512 B519 C143 8.93 1.10 Probable transmembrane protein of unknown function 1456 2735
THC0290_N_0627 intra 1022076:1022120 + A1381 B475 C138 8.01 1.63 new transcription segment 1457 2550
THC0290_0863 CDS 1022121:1022525 + A1646 B540 C143 9.02 1.66 Conserved protein of unknown function 1458 3002
THC0290_0864 CDS 1022534:1022812 + A1006 B320 C87 6.16 3.87 Restriction endonuclease (fragment) 1459 1961
THC0290_N_0628 intra 1023015:1023139 - A1852 B570 C149 9.23 -1.64 new transcription segment 1461 3950
THC0290_0866 CDS 1023140:1024330 - A595 B183 C44 11.87 -1.42 Protein of unknown function 1462 979
THC0290_N_0629 intra 1024365:1024417 - A451 B168 C44 9.34 -1.21 new transcription segment 1463 584
THC0290_0874 CDS 1030857:1031636 + A1616 B535 C143 10.90 -1.82 Putative 2 ,3 -cyclic phosphodiesterase 1472 2921
THC0290_0875 CDS 1031674:1032591 + A113 B47 C16 11.09 -1.39 5'-nucleotidase precursor 1473 143
THC0290_0880 coaE CDS 1037592:1038176 + A1765 B546 C143 10.63 1.07 Dephospho-CoA kinase 1480 3560
THC0290_N_0633 intra 1038177:1038243 + A1765 B546 C143 9.41 2.03 new transcription segment 1481 3561
THC0290_0881 rprX CDS 1038245:1039828 + A1765 B546 C143 11.03 3.36 Two-component system sensor histidine kinase RprX 1482 3521
THC0290_0882 rprY CDS 1039832:1040533 + A1765 B546 C143 12.92 1.53 Two-component system response regulatory protein RprY 1483 3516
THC0290_0883 ytxJ CDS 1040596:1040982 + A1644 B540 C143 9.73 2.71 Protein of unknown function YtxJ 1485 2993
THC0290_N_0635 3prime 1040983:1041081 + A1644 B540 C143 9.04 3.10 new transcription segment 1486 2994
THC0290_0886 pyrD CDS 1043221:1044273 + A595 B183 C44 9.94 -1.44 Dihydroorotate oxidase 1490 954
THC0290_N_0637 3prime 1045092:1045782 - A1632 B540 C143 10.50 1.85 new transcription segment 1492 2954
THC0290_0888 CDS 1045783:1046475 - A1632 B540 C143 10.01 2.02 Protein of unknown function 1494 2952
THC0290_0890 CDS 1048275:1048847 + A380 B145 C41 10.96 1.82 Nucleoside-triphosphatase 1497 486
THC0290_N_0639 intra 1048848:1048930 + A646 B183 C44 9.08 2.82 new transcription segment 1498 1406
THC0290_0891 CDS 1048948:1050882 + A967 B307 C84 11.09 2.79 Probable ATP-dependent RNA helicase, DEAD/DEAH box family 1499 1911
THC0290_N_0640 3prime 1050883:1050942 + A969 B307 C84 6.96 3.49 new transcription segment 1500 1914
THC0290_N_0641 3prime 1050917:1051043 - A1635 B540 C143 8.71 1.77 new transcription segment 1501 2963
THC0290_0894 (yfcA) CDS 1053252:1054037 + A1753 B546 C143 10.61 1.40 Probable transmembrane protein of unknown function 1504 3347
THC0290_N_0642 intra 1054038:1054100 + A1753 B546 C143 9.24 1.12 new transcription segment 1505 3348
THC0290_0899 CDS 1057171:1058484 + A1198 B413 C124 8.36 4.88 Probable outer membrane efflux protein precursor 1511 2243
THC0290_0900 CDS 1058487:1059572 + A1198 B413 C124 8.19 4.99 Probable membrane fusion efflux lipoprotein precursor 1512 2244
THC0290_0901 CDS 1059740:1062964 + A1198 B413 C124 8.01 3.18 Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein 1514 2245
THC0290_0911 crcB CDS 1073072:1073446 + A629 B183 C44 10.60 -1.21 Protein of unknown function CrcB 1530 1353
THC0290_0912 CDS 1073443:1074720 + A601 B183 C44 9.64 -1.19 Glycosyl transferase, group 1 family protein 1531 1137
THC0290_0915 CDS 1076278:1076607 + A286 B105 C30 12.07 1.45 Protein of unknown function 1534 369
THC0290_N_0650 intra 1076608:1076834 + A286 B105 C30 11.95 1.74 new transcription segment 1535 371
THC0290_0922 CDS 1082167:1082580 + A1649 B541 C143 9.69 -1.92 Protein of unknown function 1549 3010
THC0290_0923 CDS 1082679:1084841 + A207 B76 C24 10.17 -3.31 Probable TonB-dependent outer membrane receptor precursor 1550 265
THC0290_N_0656 intra 1084910:1084987 + A207 B76 C24 8.11 -3.07 new transcription segment 1551 264
THC0290_0924 CDS 1084988:1086520 + A207 B76 C24 9.39 -1.54 Probable transmembrane protein of unknown function 1552 266
THC0290_0929 corA CDS 1089573:1090643 + A77 B35 C14 9.33 -1.63 Magnesium and cobalt transport protein CorA 1561 90
THC0290_N_0661 intra 1090644:1090810 + A63 B32 C14 8.90 -1.10 new transcription segment 1562 72
THC0290_N_0663 3prime 1095517:1095601 + A1795 B549 C143 12.18 -1.69 new transcription segment 1566 3854
THC0290_0932 trmU CDS 1096121:1097308 - A1357 B469 C136 10.69 -1.08 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1567 2518
THC0290_0934 CDS 1098652:1100472 + A1179 B405 C122 8.75 3.20 Probable chloride channel protein 1569 2216
THC0290_N_0664 intra 1100473:1100698 + A1180 B405 C122 7.81 4.11 new transcription segment 1570 2217
THC0290_0936 argD CDS 1102411:1103607 + A605 B183 C44 10.36 -1.16 Acetylornithine/succinyldiaminopimelate transaminase 1573 1252
THC0290_N_0666 intra 1103608:1103853 + A1753 B546 C143 11.87 2.09 new transcription segment 1574 3344
THC0290_0937 CDS 1103877:1105271 + A1272 B425 C125 13.15 1.45 Protein of unknown function containing tetratricopeptide repeats 1576 2408
THC0290_N_0667 intra 1105272:1105424 + A1272 B425 C125 11.35 2.39 new transcription segment 1577 2410
THC0290_0938 aroE CDS 1105425:1106162 + A1272 B425 C125 11.93 2.45 Shikimate dehydrogenase 1578 2409
THC0290_N_0669 3prime 1106163:1106281 + A130 B53 C18 9.78 3.92 new transcription segment 1580 165
THC0290_0939 rlmF CDS 1106178:1107122 - A106 B45 C16 8.19 -2.78 Ribosomal RNA large subunit methyltransferase F 1581 132
THC0290_N_0671 3prime 1112888:1113081 + A1730 B546 C143 6.81 4.14 new transcription segment 1587 3196
THC0290_N_0672 3prime-PT 1113082:1113329 + A1214 B415 C124 6.67 2.67 new transcription segment 1588 2278
THC0290_0944 CDS 1115625:1117259 + A1762 B546 C143 11.12 -1.16 Probable S8 subtilisin family serine endopeptidase precursor 1591 3401
THC0290_N_0676 3prime 1120015:1120649 + A150 B59 C19 8.44 1.34 new transcription segment 1596 189
THC0290_0949 CDS 1121975:1122373 - A1520 B521 C143 5.79 -1.62 Protein of unknown function 1601 2752
THC0290_0950 CDS 1122619:1123467 - A324 B121 C33 5.17 1.07 Probable transcriptional regulator, AraC family 1602 411
THC0290_0952 gene 1124272:1124412 - A195 B70 C21 8.51 -1.30 Fragment of Protein of unknown function precursor (part 1) 1606 241
THC0290_N_0681 intra 1124413:1124485 - A564 B183 C44 10.22 -1.29 new transcription segment 1607 833
THC0290_0953 CDS 1124486:1125259 - A515 B180 C44 8.56 -1.36 Protein of unknown function 1608 688
THC0290_N_0682 intra 1125260:1125357 - A296 B110 C31 4.67 -1.59 new transcription segment 1609 381
THC0290_0954 CDS 1125358:1125897 - A542 B180 C44 12.28 -1.95 Protein of unknown function 1610 763
THC0290_0955 def CDS 1125964:1126548 - A96 B44 C16 11.31 -1.87 Peptide deformylase 1611 112
THC0290_N_0683 intra 1126568:1126737 - A96 B44 C16 10.38 -1.59 new transcription segment 1612 114
THC0290_0956 mqo CDS 1126738:1128228 - A96 B44 C16 10.44 -1.94 Malate dehydrogenase (acceptor) 1613 113
THC0290_N_0684 intra 1128229:1128339 - A1477 B507 C142 10.05 -2.18 new transcription segment 1614 2677
THC0290_0957 CDS 1128340:1128753 - A1477 B507 C142 9.09 -1.52 Putative Holliday junction resolvase 1615 2676
THC0290_N_0687 3prime 1134182:1134362 - A197 B70 C21 8.44 1.34 new transcription segment 1624 244
THC0290_N_0688 3prime 1134356:1134819 + A1820 B557 C145 7.82 2.34 new transcription segment 1625 3913
THC0290_0966 CDS 1135889:1136275 + A1758 B546 C143 7.58 1.11 Protein of unknown function 1628 3364
THC0290_N_0689 3prime-PT 1135956:1136305 - A572 B183 C44 6.09 -1.53 new transcription segment 1629 847
THC0290_0967 CDS 1136352:1137419 - A103 B45 C16 11.23 -1.87 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase family protein 1630 126
THC0290_0968 CDS 1137665:1138330 + A1601 B535 C143 9.61 -2.26 Protein of unknown function 1631 2880
THC0290_0969 CDS 1138406:1138603 + A1751 B546 C143 11.07 -1.97 Protein of unknown function 1632 3335
THC0290_0971 CDS 1139820:1141016 - A108 B45 C16 7.40 -3.45 Protein of unknown function 1635 136
THC0290_N_0693 intra 1141017:1141163 - A108 B45 C16 9.45 -4.45 new transcription segment 1636 137
THC0290_0972 sodC CDS 1141164:1141685 - A107 B45 C16 9.54 -4.29 Superoxide dismutase [Cu-Zn] 1637 134
THC0290_N_0694 3prime 1141686:1141770 - A99 B44 C16 5.55 -3.40 new transcription segment 1638 120
THC0290_0973 lpdA1 CDS 1141771:1143174 - A445 B166 C44 13.16 -1.43 Dihydrolipoyl dehydrogenase 1639 573
THC0290_0974 CDS 1143261:1143719 - A347 B129 C35 11.91 -1.15 Probable transcriptional regulator, AsnC family 1640 447
THC0290_N_0695 Rfp46 indep 1143858:1144033 - A1709 B546 C143 9.19 -1.27 new transcription segment 1641 3136
THC0290_N_0696 5prime 1143859:1144080 + A1765 B546 C143 7.76 2.65 new transcription segment 1642 3557
THC0290_0975 CDS 1144105:1145307 + A3 B3 C2 10.20 1.36 Cys/Met metabolism PLP-dependent enzyme 1644 3
THC0290_N_0698 repeated_region 1149533:1149614 + A1740 B546 C143 6.76 3.90 new transcription segment 1648 3217
THC0290_0979 CDS 1152256:1152894 + A1864 B574 C149 11.87 -1.96 Probable peroxiredoxin 1650 3964
THC0290_N_0699 intra 1152895:1152978 + A1864 B574 C149 6.07 -4.26 new transcription segment 1651 3965
THC0290_0980 CDS 1152979:1153290 + A1863 B574 C149 10.92 -2.27 Thioredoxin family protein 1652 3962
THC0290_0981 CDS 1153330:1153587 + A1864 B574 C149 10.52 -1.38 Hypothetical protein 1653 3963
THC0290_N_0701 3prime-PT 1153613:1154322 + A1661 B542 C143 4.81 -1.33 new transcription segment 1654 3034
THC0290_0982 CDS 1153638:1155428 - A696 B197 C51 12.53 1.86 Acyl-CoA dehydrogenase family protein 1655 1505
THC0290_N_0702 intra 1155429:1155590 - A694 B196 C51 10.57 2.58 new transcription segment 1656 1501
THC0290_0983 CDS 1155591:1156772 - A696 B197 C51 11.85 2.82 Acetyl-CoA C-acyltransferase 1657 1506
THC0290_N_0703 intra 1156773:1156906 - A696 B197 C51 12.57 2.87 new transcription segment 1658 1508
THC0290_0984 CDS 1156907:1157287 - A696 B197 C51 12.19 2.47 Protein of unknown function 1659 1507
THC0290_0985 CDS 1157332:1159722 - A696 B197 C51 11.79 2.35 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein 1660 1504
THC0290_0986 CDS 1159706:1160173 - A884 B274 C75 10.07 1.66 Probable transcriptional regulator, MarR-family 1661 1810
THC0290_N_0709 5prime 1168710:1168824 + A838 B254 C69 8.49 1.08 new transcription segment 1671 1746
THC0290_0994 lon CDS 1168825:1171275 + A837 B254 C69 11.28 1.53 S16 family, ATP-dependent endopeptidase La 1672 1744
THC0290_N_0710 intra 1171276:1171449 + A836 B254 C69 6.88 1.10 new transcription segment 1673 1743
THC0290_0999 CDS 1175136:1176107 - A600 B183 C44 12.17 -1.77 Protein of unknown function 1680 1076
THC0290_N_0713 intra 1176108:1176287 - A600 B183 C44 12.59 -1.93 new transcription segment 1681 1072
THC0290_1000 speA CDS 1176288:1177682 - A595 B183 C44 10.95 -3.13 Arginine decarboxylase 1683 958
THC0290_N_0714 5prime 1177683:1177902 - A103 B45 C16 9.35 -3.49 new transcription segment 1684 127
THC0290_N_0715 intra 1177904:1177957 - A1146 B389 C116 4.40 -1.09 new transcription segment 1685 2179
THC0290_1001 aroB CDS 1177958:1179025 - A523 B180 C44 9.85 -2.04 3-dehydroquinate synthase 1686 702
THC0290_1002 putA CDS 1179123:1180295 + A558 B183 C44 12.37 -1.32 Proline dehydrogenase 1687 817
THC0290_1006 CDS 1184239:1184796 - A1473 B507 C142 7.29 -2.04 LemA family protein 1694 2668
THC0290_N_0719 3prime 1185056:1185167 - A1479 B507 C142 5.49 -1.62 new transcription segment 1695 2681
THC0290_N_0720 intra 1186425:1186520 - A1875 B578 C149 10.85 -1.31 new transcription segment 1697 3978
THC0290_1008 CDS 1186521:1187555 - A1615 B535 C143 10.13 -1.30 Arginase family protein 1698 2916
THC0290_N_0723 intra 1192145:1192355 + A1747 B546 C143 10.84 2.33 new transcription segment 1705 3248
THC0290_1015 CDS 1195821:1196102 + A1628 B539 C143 7.95 -6.51 Protein of unknown function 1711 2940
THC0290_1016 kdpF CDS 1196475:1196552 + A1628 B539 C143 7.19 -5.51 Potassium-transporting ATPase F subunit 1712 2941
THC0290_1017 kdpA CDS 1196669:1198390 + A1628 B539 C143 7.07 -3.71 Potassium-transporting ATPase A subunit 1713 2942
THC0290_1018 kdpB CDS 1198491:1200524 + A1628 B539 C143 6.30 -1.20 Potassium-transporting ATPase B subunit 1714 2943
THC0290_N_0727 5prime 1201077:1201416 + A1359 B469 C136 5.62 -2.10 new transcription segment 1716 2520
THC0290_1028 gene 1208454:1208789 - A1374 B472 C137 7.88 -1.31 Conserved membrane protein of unknown function (fragment) 1728 2541
THC0290_1029 gene 1208796:1209011 - A1374 B472 C137 8.03 -1.93 Sterol desaturase family protein (fragment) 1729 2542
THC0290_1030 gene 1209004:1209357 - A1375 B472 C137 10.09 -1.79 Sterol desaturase family protein (fragment) 1730 2543
THC0290_1031 clpS CDS 1209391:1209666 - A1612 B535 C143 11.15 -1.78 ATP-dependent Clp protease adaptor protein ClpS 1731 2901
THC0290_1032 prmA CDS 1209707:1210540 - A804 B244 C67 8.93 -2.45 50S ribosomal protein L11 lysine methyltransferase 1732 1701
THC0290_N_0731 intra 1210556:1210669 - A505 B177 C44 6.31 -2.97 new transcription segment 1733 675
THC0290_1033 yncA CDS 1210670:1211167 - A1475 B507 C142 8.37 -2.21 Probable phosphinothricin N-acetyltransferase YncA 1734 2673
THC0290_1034 menD CDS 1211246:1212898 + A114 B47 C16 9.57 -2.25 Menaquinone biosynthesis protein MenD : 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase and 2-oxoglutarate decarboxylase 1735 144
THC0290_1035 CDS 1212972:1213316 + A1762 B546 C143 14.03 -1.77 Protein of unknown function 1736 3394
THC0290_N_0733 3prime 1213317:1213392 + A1762 B546 C143 8.43 -1.38 new transcription segment 1737 3413
THC0290_N_0734 3prime 1213392:1213452 - A1768 B546 C143 11.83 -1.03 new transcription segment 1738 3723
THC0290_1037 fjo11 CDS 1213924:1214790 + A1235 B419 C125 9.26 1.81 Probable transmembrane protein of unknown function Fjo11 1740 2309
THC0290_N_0735 3prime 1214425:1214796 - A1403 B482 C139 9.54 2.33 new transcription segment 1741 2577
THC0290_N_0736 3prime 1214791:1215171 + A1220 B417 C125 6.57 2.04 new transcription segment 1742 2288
THC0290_1042 cafA CDS 1218140:1219684 - A599 B183 C44 11.50 -1.03 Ribonuclease G 1749 1006
THC0290_N_0739 3prime 1219938:1220068 - A540 B180 C44 12.23 -1.03 new transcription segment 1751 746
THC0290_1047 CDS 1222598:1224994 - A98 B44 C16 9.42 -2.38 Protein of unknown function precursor, putative adhesin 1757 118
THC0290_1048 CDS 1225034:1227307 - A1156 B395 C120 9.05 2.12 Protein of unknown function precursor, putative adhesin 1758 2190
THC0290_N_0744 3prime 1229220:1229322 - A1506 B517 C143 10.39 1.15 new transcription segment 1763 2724
THC0290_1054 CDS 1231465:1232691 - A1765 B546 C143 10.60 3.23 Protein of unknown function precursor containing a C-terminal secretion signal 1769 3479
THC0290_1062 CDS 1239385:1240158 - A1157 B395 C120 7.70 3.12 CDP-alcohol phosphatidyltransferase class-I family protein 1779 2191
THC0290_1063 coxA CDS 1240263:1241282 - A1753 B546 C143 9.53 1.59 Cytochrome c oxidase assembly protein 1780 3343
THC0290_1064 cca CDS 1241368:1242789 - A1505 B516 C143 10.91 1.02 tRNA nucleotidyltransferase 1781 2723
THC0290_1070 CDS 1247959:1249245 + A523 B180 C44 9.82 -1.78 Glycosyl transferase, group 1 family protein 1789 703
THC0290_1071 CDS 1249303:1250268 - A1617 B535 C143 7.64 -1.98 Glycosyl transferase, group 2 family protein 1792 2922
THC0290_1072 wbhW CDS 1250273:1251250 - A1617 B535 C143 8.41 -1.04 Protein of unknown function WbhW 1793 2923
THC0290_N_0753 3prime 1255904:1256191 + A326 B122 C33 6.80 2.05 new transcription segment 1800 413
THC0290_N_0756 3prime-PT 1260591:1260739 - A119 B49 C18 10.67 1.45 new transcription segment 1806 152
THC0290_N_0757 3prime 1260740:1260926 - A1229 B418 C125 10.68 1.37 new transcription segment 1807 2302
THC0290_1082 dsbD CDS 1260927:1262939 - A119 B49 C18 10.45 1.90 Thiol:disulfide interchange protein DsbD precursor 1808 151
THC0290_1083 tilS CDS 1263014:1264318 - A652 B183 C44 8.49 1.05 tRNA(Ile)-lysidine synthase 1809 1422
THC0290_N_0758 intra 1264319:1264459 - A652 B183 C44 8.30 1.46 new transcription segment 1810 1423
THC0290_1084 pabB CDS 1264460:1265746 - A1513 B519 C143 9.37 1.32 Para-aminobenzoate synthase component I 1811 2738
THC0290_1085 CDS 1265923:1266828 + A1243 B419 C125 11.29 2.28 Probable lipoprotein precursor 1812 2322
THC0290_1087 CDS 1267536:1268105 - A394 B150 C42 7.63 -1.45 Protein of unknown function precursor 1815 504
THC0290_N_0760 3prime 1267536:1267906 + A1263 B422 C125 6.16 1.74 new transcription segment 1816 2396
THC0290_1089 CDS 1269289:1270377 - A41 B25 C13 7.51 -2.31 Putative transporting permease 1818 48
THC0290_1095 pfkA CDS 1278886:1279872 + A1044 B344 C102 12.42 -1.35 6-phosphofructokinase 1826 2008
THC0290_N_0763 intra 1279873:1279932 + A246 B87 C26 11.60 -1.14 new transcription segment 1827 321
THC0290_N_0769 intra 1284721:1285209 + A1794 B549 C143 9.61 1.06 new transcription segment 1838 3850
THC0290_1100 yojE CDS 1285018:1285905 - A572 B183 C44 6.55 -1.95 Probable permease YojE 1839 846
THC0290_1102 CDS 1288103:1289032 + A1366 B469 C136 8.93 -1.70 Probable lipoprotein precursor 1842 2532
THC0290_N_0771 Rfp49 indep 1288802:1288918 - A1765 B546 C143 9.26 2.71 new transcription segment 1843 3531
THC0290_N_0772 3prime 1289033:1289203 + A1366 B469 C136 8.55 -1.44 new transcription segment 1844 2533
THC0290_N_0775 3prime 1291385:1291947 - A1867 B576 C149 8.79 -1.20 new transcription segment 1849 3969
THC0290_1106 CDS 1294577:1294918 - A1614 B535 C143 11.14 -1.47 Probable arsenate reductase (glutaredoxin) 1853 2910
THC0290_1107 yyaK CDS 1294998:1295951 + A1631 B540 C143 10.15 1.89 Protein of unknown function YyaK 1854 2949
THC0290_N_0779 3prime 1297987:1298261 - A1644 B540 C143 8.43 4.29 new transcription segment 1857 2989
THC0290_N_0780 3prime 1298014:1298733 + A146 B57 C18 7.57 2.04 new transcription segment 1858 185
THC0290_1110 CDS 1298262:1298678 - A1721 B546 C143 10.91 3.40 Probable arsenate reductase (glutaredoxin) 1859 3177
THC0290_1111 CDS 1298680:1299294 - A1721 B546 C143 11.37 3.67 Protein of unknown function 1860 3178
THC0290_1112 CDS 1299295:1299420 - A1721 B546 C143 10.56 3.70 Hypothetical protein 1861 3179
THC0290_1113 CDS 1299423:1299896 - A1721 B546 C143 11.36 3.63 Protein of unknown function 1862 3175
THC0290_N_0781 intra 1299897:1299959 - A1721 B546 C143 12.17 3.52 new transcription segment 1863 3176
THC0290_1114 CDS 1299960:1300283 - A1721 B546 C143 10.02 4.46 Probable transcriptional regulator, ArsR family 1864 3174
THC0290_1115 tpx CDS 1300676:1301173 + A595 B183 C44 12.31 -1.14 Thiol peroxidase 1865 980
THC0290_1119 CDS 1304863:1306317 + A668 B187 C46 9.94 1.72 Probable transmembrane protein of unknown function 1870 1442
THC0290_N_0786 3prime 1308797:1309548 - A293 B108 C30 7.38 1.38 new transcription segment 1876 378
THC0290_1125 CDS 1313339:1315027 - A578 B183 C44 9.73 1.24 Probable type I restriction-modification system, DNA specificity domain protein 1880 861
THC0290_1128 CDS 1316964:1317203 - A1769 B546 C143 8.70 -2.14 Hypothetical protein 1884 3792
THC0290_N_0789 Rfp51 indep 1317710:1317802 - A1682 B545 C143 4.70 -1.10 new transcription segment 1886 3085
THC0290_1133 CDS 1324450:1325334 - A1747 B546 C143 11.73 1.31 Transposase IS982 family 1891 3256
THC0290_1134 gene 1325575:1327311 + A1734 B546 C143 7.47 2.47 Truncated peptidase precursor, S9 family, C-terminal region 1892 3206
THC0290_1136 CDS 1327699:1329192 - A1388 B477 C139 5.14 1.67 Probable transmembrane protein of unknown function 1894 2559
THC0290_1138 CDS 1330262:1330645 - A1795 B549 C143 7.95 -1.17 Hypothetical protein 1896 3857
THC0290_1152 CDS 1339611:1343918 + A1734 B546 C143 6.66 1.88 Probable hybrid two-component system sensor histidine kinase and response regulator receiver 1910 3207
THC0290_1153 CDS 1343923:1344357 + A32 B19 C10 6.24 2.15 Probable two-component system response regulatory protein 1911 38
THC0290_1154 CDS 1344496:1344912 + A1733 B546 C143 6.80 2.16 Probable lipoprotein precursor 1912 3204
THC0290_1160 CDS 1351246:1351737 + A1139 B382 C112 6.25 -1.41 Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1918 2171
THC0290_1165 CDS 1356605:1357303 + A1705 B546 C143 4.50 -1.07 Probable lipoprotein precursor 1923 3123
THC0290_1166 CDS 1357451:1358482 + A351 B130 C36 4.87 -1.24 Probable glycosidase, PH1107-related protein 1924 451
THC0290_1167 CDS 1358484:1360820 + A930 B291 C80 5.93 -1.25 Glycosyl transferase, group 1 family protein 1925 1866
THC0290_1168 CDS 1361030:1361524 + A1634 B540 C143 8.73 1.38 Protein of unknown function 1926 2958
THC0290_1169 CDS 1361836:1362495 + A1634 B540 C143 8.47 1.86 Probable transport-associated protein 1927 2956
THC0290_1170 CDS 1362551:1363024 + A742 B214 C56 7.94 2.19 DPS (DNA Protecting protein under Starved conditions) domain family protein 1928 1616
THC0290_1171 CDS 1363162:1363383 + A1634 B540 C143 8.57 1.93 Hypothetical protein 1930 2959
THC0290_1172 CDS 1363496:1363831 + A1634 B540 C143 8.50 2.02 Hypothetical protein 1931 2960
THC0290_1173 CDS 1363831:1364823 + A743 B214 C56 8.16 2.36 Putative D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1932 1617
THC0290_1174 CDS 1364836:1365252 + A1634 B540 C143 8.13 1.91 Probable OsmC family protein 1933 2957
THC0290_1175 gene 1365267:1365341 + A1193 B410 C123 8.47 1.97 Truncated protein N-terminal region 1934 2234
THC0290_1176 gene 1365779:1366015 + A1071 B358 C105 5.81 1.78 Truncated protein 1935 2042
THC0290_1177 gene 1366017:1366154 + A1747 B546 C143 7.21 2.33 Truncated protein 1936 3305
THC0290_1183 CDS 1370578:1371036 + A1528 B521 C143 4.98 -1.38 Hypothetical protein 1942 2766
THC0290_1186 gene 1372980:1373216 + A145 B57 C18 7.00 3.28 Truncated integral membrane protein C-terminal region 1945 184
THC0290_1187 CDS 1373220:1373978 + A1003 B318 C86 7.36 2.59 Probable ABC-type transport system, permease component 1946 1958
THC0290_1188 CDS 1373983:1374717 + A1011 B321 C87 6.95 2.24 Probable ABC-type transport system, ATPase component 1947 1966
THC0290_1189 CDS 1374731:1375690 + A993 B314 C85 6.43 1.94 Probable transmembrane protein of unknown function 1948 1948
THC0290_1192 CDS 1379964:1380848 + A1747 B546 C143 11.74 1.38 Transposase IS982 family 1952 3259
THC0290_1198 CDS 1383646:1384062 + A1541 B522 C143 5.19 2.31 Probable transmembrane protein of unknown function 1958 2783
THC0290_1199 CDS 1384160:1384657 + A1746 B546 C143 6.27 1.23 Protein of unknown function precursor 1959 3245
THC0290_1207 CDS 1387510:1389336 - A1768 B546 C143 5.99 -1.02 Protein of unknown function 1967 3716
THC0290_1208 CDS 1389458:1389991 + A1765 B546 C143 7.35 2.17 Protein of unknown function precursor 1968 3517
THC0290_N_0792 3prime 1396739:1396899 + A1646