Differential expression: Freshwater with fish [FishWater.vs.Ctrl]

Differentially expressed genes in cells maintained during 24h in aquarium containing 10L of dechlorinated water and 10 juvenile rainbow trout (5 g) maintained at 10°C under vigorous aeration, relative to standard laboratory condition (TYES 18°C 200 rpm OD600nm=1).

List of differentially expressed genomic elements (CDS and newly identified RNA elements).
Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.

Reference samples: LAB_a, LAB_c
Test samples: FishWater_a, FishWater_c

Locus Tag Name (v2) Feature type Location Clusters Base Expr. Delta Expr. Annotation Chromosome order Clusters order
THC0290_tRNA_0001 tRNA 4244:4317 - A1769 B546 C143 10.51 3.05 transfer RNA-Cys 6 3789
THC0290_N_0008 3prime-PT 8228:8499 + A1768 B546 C143 7.78 2.09 new transcription segment 15 3687
THC0290_0009 CDS 8244:9227 - A1710 B546 C143 12.63 1.51 Band 7 family protein 16 3142
THC0290_N_0009 intra 9251:9388 - A802 B244 C67 6.33 -1.38 new transcription segment 17 1697
THC0290_N_0013 3prime 18031:18294 + A646 B183 C44 9.33 -1.15 new transcription segment 26 1409
THC0290_0015 CDS 18295:18858 + A600 B183 C44 11.81 -1.61 Probable outer membrane lipoprotein precursor, OmpH family 27 1054
THC0290_N_0018 5prime 24970:25238 + A1723 B546 C143 6.66 1.20 new transcription segment 37 3181
THC0290_N_0023 3prime 32460:32570 + A1747 B546 C143 6.70 1.30 new transcription segment 46 3264
THC0290_0029 elaA CDS 47729:48178 + A1768 B546 C143 10.32 1.54 ElaA protein 55 3677
THC0290_N_0028 3prime 48179:48337 + A1817 B557 C145 8.37 1.63 new transcription segment 57 3908
THC0290_N_0029 Rfp3 indep 49141:49425 + A1768 B546 C143 9.16 1.30 new transcription segment 58 3650
THC0290_N_0031 5prime 51080:51148 + A1543 B522 C143 6.45 -1.69 new transcription segment 61 2786
THC0290_0033 gldH CDS 52515:53027 + A595 B183 C44 11.43 -1.24 Gliding motility lipoprotein precursor GldH 63 967
THC0290_0035 atoD CDS 55526:56224 + A605 B183 C44 11.84 -1.04 3-oxoacid CoA-transferase subunit A family protein AtoD 67 1236
THC0290_0036 CDS 56236:59862 + A618 B183 C44 11.65 -1.31 Probable type I endonuclease-methyltransferase fusion protein 68 1323
THC0290_0037 atoA CDS 59864:60520 + A618 B183 C44 10.79 -1.03 3-oxoacid CoA-transferase subunit B family protein AtoA 69 1322
THC0290_N_0033 3prime 60521:60568 + A691 B195 C50 6.69 2.50 new transcription segment 70 1497
THC0290_N_0037 Rfp4 indep 64013:64179 - A699 B199 C52 12.42 -3.85 new transcription segment 77 1517
THC0290_0041 CDS 64242:64637 - A700 B199 C52 11.12 -4.64 Cytochrome c551/c552 family protein 78 1523
THC0290_N_0038 intra 64654:64878 - A601 B183 C44 9.38 -1.37 new transcription segment 79 1126
THC0290_0052 CDS 74181:75047 + A1712 B546 C143 10.27 1.21 Probable transcriptional regulator, AraC family 94 3150
THC0290_0053 hemH CDS 75051:76070 + A1096 B368 C108 11.16 1.64 Ferrochelatase 95 2117
THC0290_0054 (hemJ) CDS 76103:76645 + A1097 B368 C108 10.98 1.44 Protoporphyrinogen IX oxidase 96 2118
THC0290_N_0048 intra 81912:82047 - A629 B183 C44 9.08 -1.10 new transcription segment 108 1357
THC0290_0068 CDS 89048:90010 - A446 B166 C44 12.84 -1.07 Flagellar motor/Chemotaxis (MotB)-related lipoprotein precursor 120 575
THC0290_0073 mgtE CDS 95153:96502 - A598 B183 C44 11.28 -1.70 Mg2+ transporter MgtE 129 992
THC0290_0074 ksgA CDS 96492:97271 - A598 B183 C44 10.94 -2.18 Dimethyladenosine transferase 130 993
THC0290_N_0058 intra 97272:97344 - A598 B183 C44 10.38 -1.88 new transcription segment 131 998
THC0290_0075 CDS 97345:97656 - A486 B172 C44 10.67 -2.34 Protein of unknown function 132 648
THC0290_N_0059 intra 97657:97728 - A352 B131 C36 6.42 -1.56 new transcription segment 133 452
THC0290_0076 CDS 97729:99507 - A485 B172 C44 9.46 -1.88 Tetratricopeptide repeat domain protein precursor 134 647
THC0290_N_0060 intra 99508:99741 - A486 B172 C44 11.29 -2.35 new transcription segment 135 649
THC0290_0077 serS CDS 99742:101013 - A484 B172 C44 12.60 -2.11 Serine--tRNA ligase 136 645
THC0290_N_0061 intra 101014:101224 - A484 B172 C44 12.02 -2.47 new transcription segment 137 646
THC0290_0078 CDS 101225:102457 - A484 B172 C44 11.86 -4.09 Protein of unknown function precursor 138 643
THC0290_0079 CDS 102454:102894 - A484 B172 C44 12.41 -3.91 Protein of unknown function 139 644
THC0290_0080 CDS 102896:104074 - A484 B172 C44 12.47 -3.70 Probable lipoprotein precursor 140 642
THC0290_tRNA_0002 tRNA 109057:109130 - A1769 B546 C143 11.74 1.83 transfer RNA-Asn 149 3770
THC0290_0087 CDS 112762:113097 - A1654 B542 C143 8.82 1.12 Probable single-stranded DNA-binding protein 154 3023
THC0290_0090 pepO CDS 115174:117234 - A600 B183 C44 11.95 -1.58 M13 family metallopeptidase PepO precursor 160 1070
THC0290_0092 CDS 120728:121453 + A1511 B519 C143 9.22 1.11 Probable cytochrome c oxidase biogenesis protein 162 2731
THC0290_0094 feoB CDS 121791:123884 + A1084 B365 C107 9.34 -1.61 Ferrous iron transport protein B 164 2074
THC0290_N_0071 intra 123885:124433 + A1084 B365 C107 9.49 -1.38 new transcription segment 165 2075
THC0290_0096 CDS 125431:125595 - A1768 B546 C143 5.63 1.01 Hypothetical protein 167 3577
THC0290_N_0074 3prime 129899:129947 + A1188 B407 C123 5.95 1.59 new transcription segment 174 2228
THC0290_0102 CDS 131570:132853 + A204 B75 C24 13.20 -1.25 Protein of unknown function 178 252
THC0290_0103 CDS 133119:133640 + A204 B75 C24 12.94 -1.97 Protein of unknown function precursor 180 254
THC0290_0104 CDS 133660:134139 + A204 B75 C24 13.12 -1.76 Probable lipoprotein precursor 181 255
THC0290_0105 CDS 134151:135113 + A204 B75 C24 12.60 -1.81 Protein of unknown function precursor 182 253
THC0290_0106 CDS 135128:136084 + A204 B75 C24 13.06 -2.04 Protein of unknown function precursor 183 251
THC0290_N_0078 3prime 136085:136144 + A1747 B546 C143 8.32 2.26 new transcription segment 184 3290
THC0290_N_0079 3prime 136118:136225 - A1763 B546 C143 11.38 3.05 new transcription segment 185 3432
THC0290_0107 CDS 136226:138043 - A1763 B546 C143 10.59 3.41 Putative outer membrane protein precursor 186 3431
THC0290_0116 panC CDS 145223:146071 - A605 B183 C44 10.39 -1.17 Pantoate--beta-alanine ligase 195 1248
THC0290_0120 CDS 150779:153613 + A1785 B548 C143 12.84 1.58 Probable TonB-dependent outer membrane receptor precursor 199 3835
THC0290_N_0082 intra 153614:153714 + A1785 B548 C143 11.65 1.93 new transcription segment 200 3834
THC0290_0121 CDS 153715:155214 + A1785 B548 C143 12.64 1.50 Probable lipoprotein precursor 201 3836
THC0290_0123 atpC CDS 157010:157291 + A600 B183 C44 13.41 -1.36 ATP synthase epsilon subunit 206 1097
THC0290_0129 CDS 159979:160953 + A1248 B419 C125 12.92 2.08 Putative outer membrane protein precursor 215 2360
THC0290_0130 CDS 161008:162009 + A1715 B546 C143 9.34 1.33 Probable acyl-protein synthetase 217 3160
THC0290_N_0091 3prime 162010:162767 + A1820 B557 C145 7.59 1.40 new transcription segment 218 3912
THC0290_0131 CDS 162019:162429 - A598 B183 C44 9.27 -1.02 Protein of unknown function 219 989
THC0290_0135 batE CDS 164792:165535 - A676 B189 C46 8.80 -1.10 BatE protein 228 1457
THC0290_N_0096 3prime 164809:165563 + A191 B70 C21 7.49 1.22 new transcription segment 229 237
THC0290_N_0097 repeated_region 165536:166702 - A677 B189 C46 13.44 -1.96 new transcription segment 230 1468
THC0290_0136 batD CDS 166703:168505 - A677 B189 C46 10.01 -1.76 BatD protein 231 1467
THC0290_0137 batC CDS 168527:169240 - A677 B189 C46 10.14 -1.13 BatC protein 232 1463
THC0290_N_0098 repeated_region 169241:170135 - A677 B189 C46 15.00 -1.43 new transcription segment 233 1465
THC0290_0138 batB CDS 170136:171176 - A677 B189 C46 10.48 -1.52 BatB protein 234 1461
THC0290_N_0099 intra 171177:171320 - A677 B189 C46 10.44 -1.29 new transcription segment 235 1464
THC0290_0139 CDS 171321:171701 - A677 B189 C46 10.11 -1.72 Protein of unknown function 236 1462
THC0290_N_0100 intra 171702:171755 - A677 B189 C46 12.46 -1.88 new transcription segment 237 1466
THC0290_0140 batA CDS 171756:172757 - A677 B189 C46 10.48 -1.25 BatA protein 238 1460
THC0290_0141 CDS 172759:174345 - A677 B189 C46 9.99 -1.90 Probable transmembrane protein of unknown function 239 1459
THC0290_N_0101 repeated_region 174346:176105 - A672 B188 C46 15.54 -1.43 new transcription segment 240 1448
THC0290_0142 CDS 176106:176972 - A545 B180 C44 11.24 -2.23 Protein of unknown function 241 770
THC0290_N_0102 intra 176973:177041 - A545 B180 C44 12.09 -1.42 new transcription segment 242 771
THC0290_0143 CDS 177042:178046 - A853 B257 C70 11.81 -1.11 ATPase, MoxR family 243 1774
THC0290_0146 CDS 180146:180661 + A600 B183 C44 11.90 -1.56 Probable outer membrane protein precursor, OmpA family 247 1092
THC0290_N_0104 intra 180662:180746 + A1552 B523 C143 4.81 -1.35 new transcription segment 248 2799
THC0290_N_0105 3prime 181329:181417 - A1593 B534 C143 9.82 1.96 new transcription segment 250 2868
THC0290_N_0106 3prime 181329:181404 + A1519 B521 C143 6.91 1.25 new transcription segment 251 2751
THC0290_N_0107 Rfp11 indep 182563:182671 + A1768 B546 C143 5.46 3.06 new transcription segment 253 3598
THC0290_N_0109 Rfp12 indep 184225:184363 + A1768 B546 C143 7.91 1.62 new transcription segment 257 3665
THC0290_tRNA_0003 tRNA 191432:191514 + A1769 B546 C143 13.99 1.92 transfer RNA-Leu 265 3761
THC0290_tRNA_0004 tRNA 191804:191888 - A1768 B546 C143 9.34 1.92 transfer RNA-Leu 267 3657
THC0290_0157 CDS 194650:195750 + A1765 B546 C143 9.19 2.27 Probable transmembrane protein of unknown function 272 3507
THC0290_N_0123 3prime 198042:198354 - A616 B183 C44 8.71 1.13 new transcription segment 275 1303
THC0290_N_0125 3prime 201124:201191 - A1850 B569 C149 9.20 1.75 new transcription segment 278 3948
THC0290_N_0126 intra 202620:202692 - A611 B183 C44 9.61 -1.17 new transcription segment 280 1291
THC0290_0166 CDS 210086:211081 + A1768 B546 C143 8.96 1.21 Protein of unknown function 291 3717
THC0290_N_0133 3prime 211082:211240 + A1768 B546 C143 7.82 1.53 new transcription segment 294 3681
THC0290_0170 CDS 213837:215033 - A1083 B365 C107 14.61 -1.92 Probable cell surface protein (Leucine-rich repeat protein) precursor 297 2068
THC0290_0171 CDS 215347:216612 - A1083 B365 C107 13.57 -1.78 Probable cell surface protein (Leucine-rich repeat protein) precursor 299 2066
THC0290_0172 CDS 216630:217619 - A1083 B365 C107 13.21 -1.99 Probable cell surface protein (Leucine-rich repeat protein) precursor 300 2071
THC0290_0173 CDS 217635:218969 - A1083 B365 C107 13.91 -2.00 Probable cell surface protein (Leucine-rich repeat protein) precursor 301 2069
THC0290_0174 CDS 219283:220551 - A1083 B365 C107 13.20 -2.40 Probable cell surface protein (Leucine-rich repeat protein) precursor 302 2072
THC0290_0175 CDS 220567:221559 - A1083 B365 C107 13.43 -2.70 Probable cell surface protein (Leucine-rich repeat protein) 303 2073
THC0290_0176 CDS 221575:222702 - A1083 B365 C107 13.43 -2.45 Probable cell surface protein (Leucine-rich repeat protein) precursor 304 2070
THC0290_N_0139 intra 222703:223027 - A1083 B365 C107 11.92 -3.09 new transcription segment 305 2065
THC0290_0177 CDS 223028:224638 - A1083 B365 C107 14.47 -1.50 Probable cell surface protein (Leucine-rich repeat protein) precursor 306 2059
THC0290_N_0140 repeated_region 224639:224914 - A1083 B365 C107 9.54 -2.58 new transcription segment 307 2061
THC0290_0178 CDS 224965:225888 - A1083 B365 C107 13.33 -2.88 Probable cell surface protein (Leucine-rich repeat protein) precursor 308 2067
THC0290_0179 CDS 225904:227169 - A1083 B365 C107 15.00 -1.93 Probable cell surface protein (Leucine-rich repeat protein) precursor 309 2063
THC0290_0180 CDS 227183:228379 - A1083 B365 C107 15.15 -2.15 Probable cell surface protein (Leucine-rich repeat protein) precursor 310 2064
THC0290_0181 CDS 228393:229796 - A1083 B365 C107 12.28 -2.14 Probable cell surface protein (Leucine-rich repeat protein) precursor 311 2060
THC0290_N_0142 repeated_region 229797:230072 - A1083 B365 C107 9.37 -2.74 new transcription segment 312 2062
THC0290_0182 CDS 230123:231112 - A1083 B365 C107 10.86 -3.63 Probable cell surface protein (Leucine-rich repeat protein) precursor 313 2056
THC0290_0183 CDS 231127:232047 - A1083 B365 C107 12.53 -3.17 Probable cell surface protein (Leucine-rich repeat protein) precursor 314 2057
THC0290_0184 CDS 232062:233117 - A1083 B365 C107 10.91 -2.48 Probable cell surface protein (Leucine-rich repeat protein) precursor 315 2058
THC0290_0185 CDS 233132:234121 - A1088 B365 C107 10.04 -4.23 Probable cell surface protein (Leucine-rich repeat protein) precursor 316 2088
THC0290_0186 CDS 234136:235122 - A1088 B365 C107 10.25 -3.80 Probable cell surface protein (Leucine-rich repeat protein) precursor 317 2085
THC0290_N_0145 3prime 237710:238051 - A489 B173 C44 5.76 -2.97 new transcription segment 322 652
THC0290_0190 CDS 238052:238456 - A480 B171 C44 9.38 -1.49 Probable protein chain release factor 324 633
THC0290_0191 CDS 238456:240570 - A581 B183 C44 9.67 -2.01 Probable bifunctional protein : transcriptional regulator NadR family and of unknown function 325 890
THC0290_N_0147 3prime 244080:244141 + A1670 B542 C143 8.41 1.80 new transcription segment 331 3059
THC0290_0199 CDS 249721:250146 + A1768 B546 C143 12.05 1.00 Probable transmembrane protein of unknown function 339 3672
THC0290_0200 CDS 250231:250752 + A1715 B546 C143 11.76 1.30 Hypothetical protein 340 3158
THC0290_0201 CDS 250719:251186 - A1765 B546 C143 9.75 2.22 Adenylate cyclase family protein 341 3466
THC0290_N_0155 5prime 251187:251301 - A1768 B546 C143 9.67 1.50 new transcription segment 343 3653
THC0290_N_0159 intra 254489:254544 - A601 B183 C44 7.83 -1.28 new transcription segment 349 1119
THC0290_N_0161 5prime 255694:255745 + A103 B45 C16 13.44 -1.08 new transcription segment 353 128
THC0290_0208 rnc CDS 257618:258358 + A600 B183 C44 9.78 -1.18 Ribonuclease III 357 1113
THC0290_N_0164 intra 258359:258452 + A601 B183 C44 9.17 -1.05 new transcription segment 358 1120
THC0290_0219 CDS 266940:267446 + A1747 B546 C143 8.10 1.21 Hypothetical protein 374 3297
THC0290_N_0170 3prime 267422:267648 - A1790 B549 C143 10.67 1.57 new transcription segment 375 3843
THC0290_0220 CDS 267649:268050 - A1790 B549 C143 10.92 1.89 Hypothetical protein 376 3842
THC0290_N_0171 intra 268051:268199 - A1790 B549 C143 12.52 2.08 new transcription segment 377 3845
THC0290_0221 CDS 268200:268898 - A1790 B549 C143 12.90 2.20 Protein of unknown function precursor 378 3844
THC0290_0222 CDS 268913:269659 - A1762 B546 C143 11.96 2.34 Protein of unknown function precursor 379 3403
THC0290_0232 hppD CDS 283454:284614 + A222 B82 C25 12.19 -1.13 4-hydroxyphenylpyruvate dioxygenase 396 283
THC0290_N_0178 intra 284615:284739 + A1125 B375 C109 12.86 -1.18 new transcription segment 397 2156
THC0290_0237 fpp1 CDS 288547:291963 - A1062 B352 C104 11.66 2.66 Psychrophilic metalloprotease Fpp1 precursor 403 2030
THC0290_0241 CDS 297417:297623 - A1450 B502 C142 13.35 1.72 Biotin synthase 409 2641
THC0290_N_0184 Rfp19 indep 297507:297566 + A1408 B485 C140 15.32 1.78 new transcription segment 410 2582
THC0290_0246 aroA CDS 301503:302732 - A601 B183 C44 8.65 -1.37 3-phosphoshikimate 1-carboxyvinyltransferase 420 1121
THC0290_0248 CDS 303303:303749 - A358 B136 C39 8.66 -1.29 Protein of unknown function 423 459
THC0290_0249 CDS 303781:304143 - A359 B136 C39 10.99 -1.18 Hypothetical protein Putative pseudogene 424 460
THC0290_N_0192 intra 309322:309431 - A721 B205 C53 10.55 1.10 new transcription segment 431 1573
THC0290_0254 rsgA CDS 309432:310412 - A721 B205 C53 10.40 1.09 Putative ribosome biogenesis GTPase RsgA 432 1575
THC0290_0255 CDS 310522:311604 - A721 B205 C53 9.96 1.30 Putative phospho-2-dehydro-3-deoxyheptonate aldolase 434 1574
THC0290_N_0197 3prime 316995:317307 + A1747 B546 C143 9.74 1.10 new transcription segment 443 3293
THC0290_0262 metX CDS 318651:319652 - A726 B207 C54 5.47 1.23 Homoserine O-acetyltransferase 446 1584
THC0290_0263 metY CDS 319731:321023 - A726 B207 C54 6.99 2.14 Probable O-acetylhomoserine aminocarboxypropyltransferase 447 1585
THC0290_N_0200 3prime 323909:323965 - A141 B55 C18 6.36 -1.44 new transcription segment 452 180
THC0290_0267 CDS 324293:325300 + A1486 B509 C142 4.85 -1.22 Hypothetical protein precursor 455 2691
THC0290_0277 CDS 334578:335498 - A605 B183 C44 14.22 -1.75 Protein of unknown function precursor, putative outer membrane protein 470 1238
THC0290_0280 gene 337415:337477 + A1144 B387 C115 5.28 -1.71 Truncated protein N-terminal region 474 2177
THC0290_0281 gene 337517:337570 + A1747 B546 C143 8.83 1.15 Truncated protein C-terminal region 475 3274
THC0290_0282 CDS 337611:338546 + A991 B313 C85 6.61 -1.27 Probable outer membrane protein precursor 476 1946
THC0290_0283 gene 338551:338808 + A595 B183 C44 8.03 -1.10 Fragment of hypothetical protein (part 1) 477 965
THC0290_0286 CDS 340851:343562 + A312 B118 C33 4.68 -1.32 Protein of unknown function precursor 481 397
THC0290_0287 metK CDS 343737:344987 - A854 B257 C70 11.46 -1.79 Methionine adenosyltransferase 484 1776
THC0290_N_0210 5prime 344988:345117 - A855 B257 C70 10.92 -1.94 new transcription segment 485 1778
THC0290_miscRNA_0001 misc_RNA 345053:345113 - A855 B257 C70 10.79 -2.02 SAM-II long loop 486 1777
THC0290_N_0211 intra 346306:346363 - A1344 B465 C135 11.84 1.09 new transcription segment 488 2495
THC0290_0290 gdhA CDS 348775:350118 - A595 B183 C44 14.13 -1.22 Glutamate dehydrogenase (NADP+) 490 974
THC0290_N_0216 3prime 355371:355427 + A1608 B535 C143 9.68 1.87 new transcription segment 497 2896
THC0290_N_0217 3prime 355417:355516 - A1643 B540 C143 9.26 1.13 new transcription segment 498 2985
THC0290_0297 CDS 356020:356607 + A1243 B419 C125 9.36 1.12 Protein of unknown function 500 2328
THC0290_0298 dxs CDS 356654:358429 + A1252 B419 C125 9.21 1.02 1-deoxy-D-xylulose-5-phosphate synthase 501 2370
THC0290_0299 CDS 358481:361225 - A605 B183 C44 13.91 -1.43 Probable M36 fungalysin family metalloprotease precursor 502 1224
THC0290_0304 CDS 370460:371698 + A1348 B467 C136 9.07 1.38 Probable transmembrane protein of unknown function 510 2500
THC0290_N_0222 3prime 372045:372409 + A1455 B504 C142 10.53 1.03 new transcription segment 512 2648
THC0290_0310 CDS 376525:379755 - A939 B296 C82 11.10 -1.01 Probable transmembrane protein of unknown function 518 1876
THC0290_0317 CDS 388288:389880 + A250 B89 C27 9.99 1.79 Probable glycoside hydrolase, family 13 530 326
THC0290_0322 CDS 393684:394175 - A1464 B506 C142 10.26 -1.03 Probable transmembrane protein of unknown function 539 2658
THC0290_0324 CDS 395386:395604 + A1767 B546 C143 11.64 1.18 Hypothetical protein 541 3574
THC0290_N_0243 5prime 400566:400739 + A1763 B546 C143 10.35 4.28 new transcription segment 554 3445
THC0290_0333 CDS 408753:409667 + A1102 B370 C109 13.60 1.62 Protein of unknown function precursor 556 2125
THC0290_0334 CDS 409678:411612 + A1102 B370 C109 13.64 1.08 Probable outer membrane protein precursor, OmpA family 557 2123
THC0290_N_0248 Rfp25 indep 418605:418919 + A1760 B546 C143 13.17 4.29 new transcription segment 566 3379
THC0290_N_0252 3prime 424075:424125 - A689 B194 C49 8.56 3.29 new transcription segment 576 1495
THC0290_0346 etfA CDS 424126:425094 - A697 B197 C51 13.64 1.51 Electron transfer flavoprotein, alpha subunit 577 1510
THC0290_N_0253 intra 425095:425243 - A697 B197 C51 12.33 1.67 new transcription segment 578 1511
THC0290_0347 etfB CDS 425244:425990 - A697 B197 C51 13.18 1.66 Electron transfer flavoprotein, beta subunit 579 1509
THC0290_N_0263 3prime-PT 441466:441936 - A1760 B546 C143 9.38 2.65 new transcription segment 598 3375
THC0290_N_0269 3prime-PT 448689:448837 - A1795 B549 C143 9.46 5.44 new transcription segment 612 3859
THC0290_N_0271 3prime 448838:448909 - A1795 B549 C143 10.48 6.23 new transcription segment 614 3861
THC0290_0367 CDS 448910:449260 - A1795 B549 C143 12.62 5.01 Protein of unknown function precursor 616 3860
THC0290_0368 CDS 449469:450680 - A1670 B542 C143 8.12 1.51 Probable lipoprotein precursor 617 3060
THC0290_0369 CDS 450870:453704 - A1670 B542 C143 7.90 2.64 Probable TonB-dependent outer membrane receptor precursor 618 3061
THC0290_0372 oprP CDS 455757:457094 + A1492 B512 C143 10.67 2.05 Probable phosphate-selective porin precursor 621 2706
THC0290_0373 pstS CDS 457114:457947 + A1492 B512 C143 11.94 2.51 ABC-type phosphate-transport system, binding protein precursor component PstS 622 2707
THC0290_N_0274 intra 457948:458037 + A1492 B512 C143 8.45 3.04 new transcription segment 623 2705
THC0290_0374 pstC CDS 458038:459189 + A1492 B512 C143 11.02 2.72 ABC-type phosphate-transport system, permease component PstC 624 2701
THC0290_0375 pstA CDS 459193:460137 + A1492 B512 C143 10.24 2.76 ABC-type phosphate-transport system, permease component PstA 625 2702
THC0290_0376 pstB CDS 460164:460922 + A1492 B512 C143 10.63 1.97 ABC-type phosphate-transport system, ATPase component PstB 626 2703
THC0290_0377 phoU CDS 460961:461689 + A1492 B512 C143 10.56 1.42 Phosphate transport system protein PhoU 627 2704
THC0290_0378 CDS 461753:462799 - A1401 B481 C139 7.25 1.18 Probable glycosyl transferase 628 2575
THC0290_0379 CDS 462838:463659 - A1670 B542 C143 7.40 1.42 Protein of unknown function 629 3062
THC0290_N_0276 3prime 465495:465656 - A162 B61 C19 7.39 1.47 new transcription segment 634 202
THC0290_0383 CDS 465657:466046 - A1766 B546 C143 8.78 1.66 Protein of unknown function precursor 636 3565
THC0290_0392 CDS 477872:478558 + A1711 B546 C143 10.09 1.45 Protein of unknown function precursor 649 3148
THC0290_N_0282 3prime 478559:479025 + A1711 B546 C143 9.52 1.66 new transcription segment 651 3146
THC0290_0395 CDS 481952:482293 - A1413 B488 C140 6.18 4.32 Hypothetical protein 655 2588
THC0290_tRNA_0008 tRNA 483382:483469 - A1769 B546 C143 11.23 1.73 transfer RNA-Leu 658 3763
THC0290_0397 mutS CDS 483724:486324 - A595 B183 C44 10.13 -1.10 DNA mismatch repair protein MutS 660 953
THC0290_0399 CDS 487057:487605 + A1753 B546 C143 9.22 1.20 Probable tRNA/rRNA methyltransferase 663 3351
THC0290_N_0292 3prime 493173:493641 - A196 B70 C21 7.28 1.18 new transcription segment 669 243
THC0290_0403 CDS 493642:494436 - A1768 B546 C143 10.29 1.11 Protein of unknown function 671 3673
THC0290_N_0294 5prime 494437:494488 - A1552 B523 C143 8.21 1.08 new transcription segment 672 2805
THC0290_0405 CDS 495160:496668 + A558 B183 C44 9.79 -1.06 Protein of unknown function 674 819
THC0290_N_0296 5prime 498014:498078 + A334 B125 C35 11.55 -1.43 new transcription segment 677 434
THC0290_0407 porR CDS 498079:499212 + A595 B183 C44 12.39 -1.11 PorR protein, probably involved in biosynthesis of cell surface polysaccharide 678 951
THC0290_0408 galE CDS 499324:500355 + A601 B183 C44 11.15 -1.09 UDP-glucose 4-epimerase 681 1140
THC0290_N_0298 3prime-PT 500352:500565 - A1760 B546 C143 9.50 2.15 new transcription segment 682 3376
THC0290_0410 fabD CDS 501009:501881 - A609 B183 C44 10.38 -1.05 Malonyl CoA-acyl carrier protein transacylase 686 1282
THC0290_N_0303 intra 501925:502073 - A587 B183 C44 7.51 -1.03 new transcription segment 687 920
THC0290_0415 CDS 505149:506246 - A1417 B489 C140 11.70 1.04 Fatty acid desaturase 694 2599
THC0290_0416 gidB CDS 506352:506981 + A1760 B546 C143 10.48 1.46 Methyltransferase GidB 695 3370
THC0290_N_0304 3prime 506982:507043 + A1552 B523 C143 6.19 1.73 new transcription segment 696 2806
THC0290_0424 CDS 514770:516161 - A1719 B546 C143 9.22 2.14 Probable outer membrane efflux protein precursor 707 3167
THC0290_0425 CDS 516165:517523 - A1719 B546 C143 10.06 2.81 Probable ABC-type transport system, membrane fusion efflux protein component 708 3168
THC0290_0426 CDS 517529:519190 - A1719 B546 C143 10.10 3.15 Probable ABC-type transport system, ATPase and permease components 709 3169
THC0290_0427 CDS 519196:519870 - A1719 B546 C143 9.52 3.04 Probable transcriptional regulator, TetR family 710 3166
THC0290_0429 CDS 521589:522020 + A1509 B519 C143 8.96 1.59 Hypothetical transmembrane protein 712 2728
THC0290_N_0309 3prime 522021:522213 + A1509 B519 C143 10.23 1.62 new transcription segment 713 2729
THC0290_N_0311 intra 524398:524889 + A1765 B546 C143 8.93 1.07 new transcription segment 716 3534
THC0290_miscRNA_0002 misc_RNA 524890:524985 + A1765 B546 C143 10.76 1.49 TPP riboswitch [THI element] 717 3484
THC0290_N_0312 intra 524986:525051 + A729 B209 C54 10.73 1.01 new transcription segment 718 1595
THC0290_N_0322 3prime 539143:539314 - A1872 B578 C149 9.08 1.44 new transcription segment 740 3974
THC0290_N_0326 3prime 553386:553649 - A703 B199 C52 9.33 -2.78 new transcription segment 755 1531
THC0290_N_0328 3prime-PT 553432:553812 + A87 B41 C15 8.19 1.51 new transcription segment 756 103
THC0290_0456 CDS 553650:554273 - A702 B199 C52 10.84 -4.31 Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer 757 1530
THC0290_0457 tsf CDS 554438:555262 - A599 B183 C44 13.10 -1.28 Elongation factor Ts (EF-Ts) 758 1008
THC0290_N_0331 intra 555263:555363 - A599 B183 C44 12.27 -1.22 new transcription segment 759 1009
THC0290_N_0336 3prime 564168:564864 + A1252 B419 C125 8.06 1.26 new transcription segment 775 2374
THC0290_N_0339 3prime-PT 567081:567646 - A1760 B546 C143 8.56 3.56 new transcription segment 782 3374
THC0290_0475 gene 580335:580526 - A1765 B546 C143 8.77 1.09 Transposase (fragment) 799 3490
THC0290_N_0351 repeated_region 585398:586012 - A1765 B546 C143 9.03 1.14 new transcription segment 808 3522
THC0290_0482 CDS 586087:587670 + A1765 B546 C143 8.81 1.66 Transposase IS1182 family 809 3526
THC0290_N_0354 5prime 589619:589720 - A1747 B546 C143 8.69 1.63 new transcription segment 814 3300
THC0290_0485 CDS 589753:591324 + A1765 B546 C143 8.95 1.76 Transposase IS1182 family 815 3527
THC0290_0487 CDS 592935:594287 + A841 B255 C69 11.10 -2.72 Protein of unknown function 817 1757
THC0290_0488 CDS 594274:594957 + A841 B255 C69 10.23 -2.56 Protein of unknown function 818 1758
THC0290_N_0355 intra 594958:595161 + A866 B262 C70 9.03 -1.70 new transcription segment 819 1790
THC0290_0489 CDS 595162:596364 + A331 B122 C33 10.94 -1.00 Transposase IS256 family 820 422
THC0290_0502 CDS 608390:609994 + A1765 B546 C143 8.83 1.72 Transposase IS1182 family 839 3528
THC0290_0504 CDS 611442:612659 + A1765 B546 C143 8.68 1.25 Probable transposase 843 3543
THC0290_0506 CDS 613962:614243 + A1415 B488 C140 7.32 4.84 Protein of unknown function 847 2590
THC0290_0507 gene 614341:614829 + A1415 B488 C140 6.08 3.95 Truncated protein of unknown function, N-terminal region 848 2591
THC0290_N_0367 repeated_region 614486:614829 - A1768 B546 C143 6.36 3.63 new transcription segment 849 3600
THC0290_N_0372 repeated_region 633986:634186 - A1765 B546 C143 9.04 2.53 new transcription segment 863 3515
THC0290_0517 CDS 634225:634386 - A1765 B546 C143 9.32 2.95 Hypothetical protein 864 3514
THC0290_N_0373 intra 634387:634452 - A1765 B546 C143 12.38 3.51 new transcription segment 865 3513
THC0290_0518 CDS 634453:634626 - A1765 B546 C143 11.77 3.69 Conserved protein of unknown function 866 3512
THC0290_N_0374 intra 634627:634806 - A1765 B546 C143 10.62 4.11 new transcription segment 867 3511
THC0290_0519 CDS 634807:635154 - A1765 B546 C143 11.37 1.55 Conserved protein of unknown function 869 3504
THC0290_0520 CDS 635151:635951 - A1765 B546 C143 11.03 1.62 Probable transcriptional regulator 870 3505
THC0290_0521 CDS 637705:637932 - A1233 B419 C125 5.32 2.57 Protein of unknown function 871 2307
THC0290_N_0377 repeated_region 641242:642097 - A1252 B419 C125 9.89 1.40 new transcription segment 877 2368
THC0290_0526 CDS 642217:643776 + A1765 B546 C143 8.86 1.79 Transposase IS1182 family 878 3529
THC0290_N_0378 repeated_region 645071:645304 + A1686 B545 C143 8.33 1.25 new transcription segment 880 3092
THC0290_0529 CDS 646131:646511 - A669 B187 C46 8.68 -1.27 Hypothetical protein 884 1443
THC0290_N_0388 repeated_region 655785:656570 - A1252 B419 C125 9.55 1.30 new transcription segment 901 2367
THC0290_0540 CDS 656981:657529 - A1760 B546 C143 12.54 1.16 Hypothetical protein 903 3377
THC0290_N_0390 Rfp30 indep 658610:658815 + A1762 B546 C143 11.21 2.00 new transcription segment 906 3412
THC0290_0543 CDS 660017:661417 - A1252 B419 C125 7.82 1.89 Hypothetical protein 910 2373
THC0290_N_0393 repeated_region 661643:662054 - A1766 B546 C143 12.44 1.44 new transcription segment 911 3563
THC0290_N_0395 repeated_region 666241:666640 - A1768 B546 C143 8.54 1.23 new transcription segment 917 3576
THC0290_N_0396 intra 668261:668748 - A1765 B546 C143 8.47 1.81 new transcription segment 921 3545
THC0290_N_0397 repeated_region 669370:670142 - A1765 B546 C143 8.71 1.16 new transcription segment 923 3523
THC0290_0556 CDS 678342:679628 - A1356 B468 C136 9.07 1.11 Probable type II modification methyltransferase Sau3AI 932 2515
THC0290_N_0404 repeated_region 683377:684734 - A1252 B419 C125 9.73 1.10 new transcription segment 941 2369
THC0290_N_0410 repeated_region 693406:693624 - A842 B255 C69 9.92 -1.39 new transcription segment 954 1760
THC0290_0569 CDS 693625:694329 - A842 B255 C69 10.28 -1.74 Protein of unknown function 955 1759
THC0290_N_0411 repeated_region 695663:696066 - A1765 B546 C143 12.30 1.16 new transcription segment 957 3456
THC0290_N_0412 repeated_region 696397:696658 - A1768 B546 C143 10.07 1.54 new transcription segment 959 3592
THC0290_N_0415 repeated_region 698501:698961 - A1765 B546 C143 11.81 1.47 new transcription segment 964 3454
THC0290_0574 CDS 698962:700197 - A1191 B409 C123 10.48 1.24 Major facilitator superfamily (MFS) permease 965 2231
THC0290_0581 CDS 707782:708492 + A1765 B546 C143 11.06 2.48 Protein of unknown function 979 3501
THC0290_0582 CDS 708481:710181 - A1103 B371 C109 10.48 1.55 Protein of unknown function containing peptidoglycan binding domain 981 2127
THC0290_N_0424 3prime 708493:708688 + A1645 B540 C143 9.28 2.72 new transcription segment 982 2997
THC0290_N_0425 3prime-PT 708689:709190 + A1645 B540 C143 7.99 1.80 new transcription segment 983 2998
THC0290_0587 CDS 713131:715374 + A1446 B502 C142 11.52 1.06 Probable M1 family aminopeptidase precursor 991 2632
THC0290_0588 CDS 715514:716959 - A552 B181 C44 8.85 -1.06 Probable amino acid-transporting permease 993 796
THC0290_N_0433 intra 729464:729774 + A664 B187 C46 8.73 -2.00 new transcription segment 1001 1438
THC0290_0594 CDS 729775:729990 + A599 B183 C44 9.27 -1.68 Conserved protein of unknown function 1002 1021
THC0290_N_0434 3prime 729991:730208 + A601 B183 C44 10.76 -2.33 new transcription segment 1003 1129
THC0290_N_0435 intra 730209:730951 + A318 B119 C33 9.76 -1.78 new transcription segment 1004 404
THC0290_0596 fjo27 CDS 731427:731732 + A600 B183 C44 13.24 -1.44 Conserved membrane protein of unknown function 1007 1046
THC0290_N_0438 repeated_region 734673:735247 + A1842 B563 C145 7.77 1.01 new transcription segment 1011 3938
THC0290_0600 CDS 736346:737788 - A1412 B488 C140 11.31 1.08 Probable outer membrane efflux protein precursor 1013 2587
THC0290_N_0441 3prime 739332:739567 + A1420 B491 C140 9.22 1.55 new transcription segment 1017 2602
THC0290_0609 cyoE CDS 743756:744658 - A788 B239 C67 9.98 1.61 Protoheme IX farnesyltransferase 1026 1677
THC0290_N_0444 3prime 745438:745510 - A1762 B546 C143 15.29 1.51 new transcription segment 1028 3393
THC0290_0611 CDS 745511:745864 - A1762 B546 C143 13.91 1.85 Protein of unknown function 1029 3392
THC0290_0615 CDS 750566:751084 + A1407 B485 C140 11.42 2.12 Carbonic anhydrase/acetyltransferase family protein 1036 2581
THC0290_N_0447 3prime 751085:752281 + A1248 B419 C125 8.89 1.91 new transcription segment 1037 2361
THC0290_0617 CDS 752305:752805 - A400 B152 C42 13.51 -1.90 Outer membrane protein precursor OmpH family P18 1041 514
THC0290_N_0454 3prime-PT 761018:761188 + A148 B58 C19 6.34 -1.66 new transcription segment 1054 187
THC0290_N_0460 Rfp32 indep 767146:767422 - A1768 B546 C143 7.10 1.52 new transcription segment 1066 3682
THC0290_0634 CDS 768501:769142 - A1768 B546 C143 9.56 1.12 O-methyltransferase 1072 3732
THC0290_N_0465 intra 770297:771152 + A1715 B546 C143 7.70 2.71 new transcription segment 1075 3159
THC0290_0636 CDS 770321:771202 - A1765 B546 C143 11.25 3.89 Probable lipoprotein precursor 1076 3493
THC0290_0639 CDS 773016:773693 + A1710 B546 C143 8.41 1.37 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1079 3145
THC0290_0642 CDS 776332:777606 + A1767 B546 C143 8.03 2.21 Protein of unknown function precursor 1082 3568
THC0290_N_0467 3prime 779421:779788 - A1768 B546 C143 9.20 4.02 new transcription segment 1085 3729
THC0290_0644 CDS 779789:780418 - A1768 B546 C143 11.68 4.71 Two-component system response regulatory protein, LuxR family 1087 3728
THC0290_N_0469 intra 780456:780505 - A594 B183 C44 5.52 -2.44 new transcription segment 1088 950
THC0290_0650 mraZ CDS 784611:785084 + A1711 B546 C143 11.43 1.15 Protein MraZ 1099 3149
THC0290_0651 mraW CDS 785092:785967 + A1711 B546 C143 11.21 1.06 S-adenosyl-methyltransferase MraW 1100 3147
THC0290_N_0478 intra 794901:794953 + A477 B170 C44 11.95 -1.07 new transcription segment 1111 630
THC0290_N_0484 3prime 802212:803155 + A1248 B419 C125 7.32 1.27 new transcription segment 1125 2359
THC0290_N_0485 3prime 803148:803240 - A1242 B419 C125 8.84 1.50 new transcription segment 1127 2320
THC0290_N_0486 Rfp35 indep 803241:803318 - A1641 B540 C143 11.42 2.01 new transcription segment 1128 2980
THC0290_0666 rpoD CDS 803319:804182 - A1641 B540 C143 13.14 1.82 RNA polymerase sigma-70 factor RpoD 1129 2979
THC0290_0670 CDS 807710:809137 - A1762 B546 C143 10.31 1.12 Probable nucleoside-diphosphate-sugar epimerase 1135 3400
THC0290_0671 phrB3 CDS 809155:810447 - A1742 B546 C143 8.45 1.70 Deoxyribodipyrimidine photolyase PhrB3 1136 3225
THC0290_0672 CDS 810444:812006 - A1742 B546 C143 8.25 1.59 Protein of unknown function related to deoxyribodipyrimidine photolyase 1137 3226
THC0290_N_0492 intra 812007:812083 - A1747 B546 C143 9.50 2.53 new transcription segment 1138 3270
THC0290_0673 phrB2 CDS 812084:813592 - A1763 B546 C143 8.94 2.05 Deoxyribodipyrimidine photolyase PhrB2 1139 3439
THC0290_0674 CDS 813604:814233 - A1763 B546 C143 9.46 1.83 Protein of unknown function 1140 3440
THC0290_0675 CDS 814274:814693 - A1763 B546 C143 9.85 2.55 Protein of unknown function 1141 3443
THC0290_0676 CDS 814714:815004 - A1763 B546 C143 10.38 2.87 Protein of unknown function 1142 3444
THC0290_0680 CDS 816720:817085 + A1768 B546 C143 9.98 1.95 Protein of unknown function 1146 3721
THC0290_N_0495 intra 817086:817137 + A1674 B543 C143 10.27 4.94 new transcription segment 1147 3072
THC0290_0681 CDS 817138:819144 + A1674 B543 C143 12.22 5.20 Probable TonB-dependent outer membrane receptor precursor 1148 3071
THC0290_0682 CDS 819184:819525 + A1674 B543 C143 12.45 3.78 Protein of unknown function 1149 3069
THC0290_0683 CDS 819616:819906 + A1674 B543 C143 13.51 1.90 Hypothetical protein 1150 3070
THC0290_N_0497 intra 819907:819970 + A1674 B543 C143 11.48 6.01 new transcription segment 1151 3075
THC0290_0684 sulP CDS 819971:821572 + A1674 B543 C143 13.32 5.81 Probable sulfate permease 1152 3076
THC0290_0685 cynT CDS 821595:822230 + A1674 B543 C143 13.75 4.73 Carbonic anhydrase 1153 3077
THC0290_N_0498 3prime 822231:822315 + A1674 B543 C143 10.07 3.88 new transcription segment 1154 3073
THC0290_0686 CDS 822316:823008 + A1674 B543 C143 11.55 2.66 Transmembrane protein of unknown function, DedA family 1155 3074
THC0290_0688 CDS 823730:824341 - A1449 B502 C142 11.04 1.42 Probable hydrolase (HAD superfamily) 1157 2639
THC0290_0692 CDS 826788:828029 - A1747 B546 C143 9.49 1.09 Probable ABC-type transport system, permease component 1162 3294
THC0290_0695 fspA CDS 830831:831442 - A618 B183 C44 14.81 -2.16 Flavobacterial-specific protein antigen FspA precursor 1170 1320
THC0290_N_0510 Rfp36 indep 840044:840245 - A1244 B419 C125 8.84 1.36 new transcription segment 1183 2343
THC0290_0707 CDS 844456:845016 + A1762 B546 C143 13.02 1.54 Putative transcriptional regulator 1190 3410
THC0290_N_0516 3prime 844739:845012 - A1684 B545 C143 7.15 1.64 new transcription segment 1191 3087
THC0290_N_0517 3prime 845017:845453 + A1643 B540 C143 8.28 2.24 new transcription segment 1193 2986
THC0290_N_0519 3prime 846486:846777 - A595 B183 C44 11.95 -1.23 new transcription segment 1196 956
THC0290_N_0521 intra 847348:847417 - A454 B168 C44 9.92 -1.76 new transcription segment 1199 589
THC0290_0724 irk CDS 859337:860293 - A1604 B535 C143 8.93 1.51 Inward rectifier potassium channel Irk 1217 2888
THC0290_0725 carB CDS 860354:863206 - A787 B239 C67 10.60 2.39 Carbamoyl-phosphate synthase large subunit 1218 1675
THC0290_N_0526 intra 863207:863394 - A787 B239 C67 10.70 2.65 new transcription segment 1219 1676
THC0290_0728 groL CDS 864839:866467 - A840 B254 C69 12.88 -1.80 60 kDa chaperonin GroEL 1225 1749
THC0290_N_0530 intra 866468:866905 - A840 B254 C69 13.21 -1.64 new transcription segment 1226 1751
THC0290_0729 groS CDS 866906:867181 - A840 B254 C69 12.64 -1.93 10 kDa chaperonin GroES 1227 1750
THC0290_N_0531 3prime 867274:867320 - A391 B149 C42 8.74 1.30 new transcription segment 1228 501
THC0290_N_0536 3prime 872624:872743 - A1802 B553 C144 6.98 1.23 new transcription segment 1238 3889
THC0290_N_0553 intra 893946:894137 + A967 B307 C84 9.15 1.16 new transcription segment 1273 1910
THC0290_0754 CDS 896547:899900 + A1794 B549 C143 12.32 1.36 Protein of unknown function precursor, putative adhesin 1278 3851
THC0290_N_0558 3prime 906298:906570 - A192 B70 C21 6.71 -1.40 new transcription segment 1288 238
THC0290_N_0563 3prime 910894:911072 + A1685 B545 C143 9.38 1.70 new transcription segment 1297 3089
THC0290_0774 CDS 922230:925658 - A1772 B546 C143 9.32 1.31 Methylmalonyl-CoA mutase 1316 3796
THC0290_0777 CDS 926970:927692 + A1244 B419 C125 10.52 1.02 Protein of unknown function precursor 1320 2345
THC0290_N_0573 Rfp40 indep 927787:927860 + A1768 B546 C143 7.49 2.75 new transcription segment 1321 3602
THC0290_0779 CDS 928488:929126 + A1765 B546 C143 9.00 1.46 Probable pyrophosphohydrolase 1324 3550
THC0290_N_0575 3prime 929531:929992 - A1226 B417 C125 7.54 1.47 new transcription segment 1326 2297
THC0290_0781 CDS 929993:930601 - A1232 B419 C125 8.57 1.15 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1327 2305
THC0290_0782 CDS 930615:931109 - A1696 B546 C143 9.51 1.60 RNA polymerase ECF-type sigma factor 1328 3106
THC0290_0784 CDS 932625:933680 - A1768 B546 C143 8.47 1.23 Probable transmembrane protein of unknown function 1331 3664
THC0290_N_0576 3prime 935243:935309 + A1855 B570 C149 12.44 -1.42 new transcription segment 1333 3953
THC0290_0788 CDS 938186:938767 + A1795 B549 C143 11.51 2.34 Protein of unknown function precursor 1337 3853
THC0290_N_0578 intra 938768:938895 + A1765 B546 C143 8.61 2.33 new transcription segment 1338 3482
THC0290_0789 CDS 938927:940153 + A578 B183 C44 11.77 -1.06 Glu/Leu/Phe/Val dehydrogenase family protein 1339 865
THC0290_N_0579 5prime 940174:940237 + A578 B183 C44 12.52 -1.05 new transcription segment 1340 867
THC0290_0790 CDS 940238:940999 + A578 B183 C44 11.19 -1.33 Hypothetical protein 1341 866
THC0290_N_0580 intra 941000:941283 + A667 B187 C46 11.22 -1.67 new transcription segment 1342 1441
THC0290_N_0581 repeated_region 942166:942314 + A866 B262 C70 9.04 -1.39 new transcription segment 1344 1791
THC0290_0793 CDS 943571:944119 - A1088 B365 C107 9.69 -4.13 Probable transmembrane protein of unknown function 1347 2094
THC0290_0794 fhuA CDS 944125:946380 - A1088 B365 C107 10.35 -4.71 Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA 1348 2095
THC0290_0806 pcm CDS 960228:960869 + A311 B117 C33 10.57 -1.08 Protein-L-isoaspartate(D-aspartate) O-methyltransferase 1370 396
THC0290_N_0591 3prime 960870:961013 + A414 B156 C44 10.34 -1.52 new transcription segment 1371 529
THC0290_N_0592 3prime 962079:962138 + A1190 B409 C123 8.03 1.59 new transcription segment 1373 2230
THC0290_0808 CDS 962645:964048 + A1749 B546 C143 9.75 1.07 Probable transmembrane protein of unknown function 1374 3315
THC0290_N_0593 3prime 965318:965499 - A1747 B546 C143 8.45 1.87 new transcription segment 1376 3273
THC0290_N_0602 intra 977563:977781 - A1244 B419 C125 9.79 1.10 new transcription segment 1394 2344
THC0290_0824 ppiA CDS 982856:983950 + A601 B183 C44 12.29 -1.58 Probable peptidyl-prolyl cis-trans isomerase precursor PpiA 1400 1177
THC0290_0825 ppiB CDS 983971:985056 + A601 B183 C44 12.10 -1.82 Probable peptidyl-prolyl cis-trans isomerase precursor PpiB 1401 1178
THC0290_0828 CDS 988051:988332 - A1762 B546 C143 13.25 1.33 Protein of unknown function 1405 3391
THC0290_0829 CDS 988595:989146 + A1762 B546 C143 11.41 1.03 Probable ribosomal-protein-amino-adic N-acetyltransferase 1406 3411
THC0290_0832 dcp2 CDS 990238:992370 - A1796 B549 C143 10.14 1.91 Peptidyl-dipeptidase precursor Dcp2 1410 3876
THC0290_0853 yfkH CDS 1012228:1013175 + A601 B183 C44 9.80 -1.21 Protein of unknown function YfkH 1442 1168
THC0290_N_0621 3prime 1016422:1016591 - A1765 B546 C143 12.77 1.10 new transcription segment 1446 3553
THC0290_N_0622 3prime 1016526:1016771 + A1837 B563 C145 5.90 -1.12 new transcription segment 1447 3931
THC0290_N_0625 intra 1018645:1018746 + A810 B244 C67 7.10 -1.69 new transcription segment 1453 1709
THC0290_0860 CDS 1018747:1019220 + A586 B183 C44 8.44 -1.19 Protein of unknown function 1454 912
THC0290_0864 CDS 1022534:1022812 + A1006 B320 C87 4.86 -1.10 Restriction endonuclease (fragment) 1459 1961
THC0290_N_0629 intra 1024365:1024417 - A451 B168 C44 9.71 -1.04 new transcription segment 1463 584
THC0290_0876 gene 1033238:1033369 - A1768 B546 C143 8.31 1.53 protein of unknown function (fragment) 1476 3691
THC0290_0877 gene 1033435:1033563 - A1747 B546 C143 8.34 1.73 Cytosine-specific methyltransferase (fragment) 1477 3272
THC0290_0878 CDS 1034261:1036504 + A1796 B549 C143 10.38 6.39 Protein of unknown function precursor, putative adhesin 1478 3881
THC0290_N_0633 intra 1038177:1038243 + A1765 B546 C143 8.47 1.19 new transcription segment 1481 3561
THC0290_0881 rprX CDS 1038245:1039828 + A1765 B546 C143 10.49 1.27 Two-component system sensor histidine kinase RprX 1482 3521
THC0290_0882 rprY CDS 1039832:1040533 + A1765 B546 C143 12.84 1.64 Two-component system response regulatory protein RprY 1483 3516
THC0290_0883 ytxJ CDS 1040596:1040982 + A1644 B540 C143 9.52 2.26 Protein of unknown function YtxJ 1485 2993
THC0290_N_0635 3prime 1040983:1041081 + A1644 B540 C143 8.69 2.01 new transcription segment 1486 2994
THC0290_0891 CDS 1048948:1050882 + A967 B307 C84 12.08 2.63 Probable ATP-dependent RNA helicase, DEAD/DEAH box family 1499 1911
THC0290_N_0640 3prime 1050883:1050942 + A969 B307 C84 7.11 2.67 new transcription segment 1500 1914
THC0290_0893 CDS 1052483:1053235 + A1753 B546 C143 10.11 1.59 Protein of unknown function precursor 1503 3355
THC0290_0894 (yfcA) CDS 1053252:1054037 + A1753 B546 C143 10.68 1.24 Probable transmembrane protein of unknown function 1504 3347
THC0290_0910 CDS 1070654:1073071 + A623 B183 C44 10.35 -1.03 Protein of unknown function 1529 1336
THC0290_0911 crcB CDS 1073072:1073446 + A629 B183 C44 10.52 -1.18 Protein of unknown function CrcB 1530 1353
THC0290_0912 CDS 1073443:1074720 + A601 B183 C44 9.64 -1.02 Glycosyl transferase, group 1 family protein 1531 1137
THC0290_tRNA_0017 tRNA 1081988:1082061 + A1769 B546 C143 12.45 1.64 transfer RNA-Thr 1548 3766
THC0290_0923 CDS 1082679:1084841 + A207 B76 C24 7.91 -2.94 Probable TonB-dependent outer membrane receptor precursor 1550 265
THC0290_N_0656 intra 1084910:1084987 + A207 B76 C24 6.55 -5.16 new transcription segment 1551 264
THC0290_0924 CDS 1084988:1086520 + A207 B76 C24 7.76 -3.14 Probable transmembrane protein of unknown function 1552 266
THC0290_N_0657 intra 1087045:1087158 + A1085 B365 C107 11.50 -1.00 new transcription segment 1554 2076
THC0290_0926 ftnA CDS 1087175:1087702 + A1414 B488 C140 14.39 1.56 Ferritin 1555 2589
THC0290_N_0659 3prime 1087703:1087790 + A1747 B546 C143 8.13 2.94 new transcription segment 1557 3275
THC0290_0931 CDS 1092634:1095516 + A1796 B549 C143 12.89 6.04 Collagenase precursor 1565 3878
THC0290_N_0663 3prime 1095517:1095601 + A1795 B549 C143 9.81 6.17 new transcription segment 1566 3854
THC0290_0932 trmU CDS 1096121:1097308 - A1357 B469 C136 11.46 1.04 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1567 2518
THC0290_0942 clpB CDS 1110287:1112887 + A1213 B415 C124 10.97 -2.32 ATPase with chaperone activity ATP-binding subunit 1585 2277
THC0290_N_0672 3prime-PT 1113082:1113329 + A1214 B415 C124 5.43 -2.56 new transcription segment 1588 2278
THC0290_N_0675 Rfp45 indep 1119827:1119911 - A1765 B546 C143 9.05 3.12 new transcription segment 1595 3510
THC0290_0951 gene 1123621:1123923 - A321 B120 C33 5.53 -1.52 Fragment of Protein of unknown function precursor (part 2) 1604 408
THC0290_N_0682 intra 1125260:1125357 - A296 B110 C31 5.08 -1.80 new transcription segment 1609 381
THC0290_0954 CDS 1125358:1125897 - A542 B180 C44 13.60 -1.11 Protein of unknown function 1610 763
THC0290_0960 CDS 1130977:1132209 - A1779 B546 C143 10.11 1.36 Major facilitator superfamily (MFS) permease 1619 3815
THC0290_0962 CDS 1132895:1133551 + A1514 B519 C143 9.60 1.10 TatD-related DNase 1621 2741
THC0290_N_0687 3prime 1134182:1134362 - A197 B70 C21 8.66 2.05 new transcription segment 1624 244
THC0290_N_0688 3prime 1134356:1134819 + A1820 B557 C145 6.96 1.02 new transcription segment 1625 3913
THC0290_N_0689 3prime-PT 1135956:1136305 - A572 B183 C44 7.95 -1.74 new transcription segment 1629 847
THC0290_0967 CDS 1136352:1137419 - A103 B45 C16 12.53 -1.25 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase family protein 1630 126
THC0290_0968 CDS 1137665:1138330 + A1601 B535 C143 10.11 1.16 Protein of unknown function 1631 2880
THC0290_N_0692 3prime-PT 1138630:1139078 + A1766 B546 C143 8.08 3.33 new transcription segment 1633 3562
THC0290_0971 CDS 1139820:1141016 - A108 B45 C16 8.94 -1.08 Protein of unknown function 1635 136
THC0290_N_0694 3prime 1141686:1141770 - A99 B44 C16 6.31 -2.83 new transcription segment 1638 120
THC0290_0977 CDS 1147602:1149359 - A1795 B549 C143 7.59 5.33 Esterase/lipase/thioesterase family protein precursor 1647 3864
THC0290_0978 katG CDS 1149873:1152080 + A1791 B549 C143 11.84 4.70 Bi-functional catalase-peroxidase 1649 3846
THC0290_0979 CDS 1152256:1152894 + A1864 B574 C149 14.04 1.37 Probable peroxiredoxin 1650 3964
THC0290_N_0699 intra 1152895:1152978 + A1864 B574 C149 9.36 1.62 new transcription segment 1651 3965
THC0290_0981 CDS 1153330:1153587 + A1864 B574 C149 12.59 1.49 Hypothetical protein 1653 3963
THC0290_N_0701 3prime-PT 1153613:1154322 + A1661 B542 C143 6.85 1.71 new transcription segment 1654 3034
THC0290_0982 CDS 1153638:1155428 - A696 B197 C51 12.34 1.73 Acyl-CoA dehydrogenase family protein 1655 1505
THC0290_N_0702 intra 1155429:1155590 - A694 B196 C51 10.48 1.48 new transcription segment 1656 1501
THC0290_0983 CDS 1155591:1156772 - A696 B197 C51 11.78 2.11 Acetyl-CoA C-acyltransferase 1657 1506
THC0290_N_0703 intra 1156773:1156906 - A696 B197 C51 12.80 1.30 new transcription segment 1658 1508
THC0290_0984 CDS 1156907:1157287 - A696 B197 C51 12.29 1.37 Protein of unknown function 1659 1507
THC0290_0985 CDS 1157332:1159722 - A696 B197 C51 12.26 2.24 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein 1660 1504
THC0290_0986 CDS 1159706:1160173 - A884 B274 C75 11.32 2.17 Probable transcriptional regulator, MarR-family 1661 1810
THC0290_N_0709 5prime 1168710:1168824 + A838 B254 C69 9.02 -3.30 new transcription segment 1671 1746
THC0290_0994 lon CDS 1168825:1171275 + A837 B254 C69 11.05 -2.02 S16 family, ATP-dependent endopeptidase La 1672 1744
THC0290_N_0710 intra 1171276:1171449 + A836 B254 C69 7.26 -2.03 new transcription segment 1673 1743
THC0290_0998 CDS 1174719:1175126 - A600 B183 C44 12.70 -1.44 Hypothetical protein 1679 1075
THC0290_0999 CDS 1175136:1176107 - A600 B183 C44 12.59 -1.34 Protein of unknown function 1680 1076
THC0290_N_0716 intra 1181201:1181289 + A459 B168 C44 10.07 -1.33 new transcription segment 1689 596
THC0290_N_0717 Rfp47 indep 1182025:1182142 + A1683 B545 C143 10.74 2.07 new transcription segment 1691 3086
THC0290_N_0720 intra 1186425:1186520 - A1875 B578 C149 12.45 1.10 new transcription segment 1697 3978
THC0290_N_0723 intra 1192145:1192355 + A1747 B546 C143 10.28 2.29 new transcription segment 1705 3248
THC0290_N_0725 3prime 1194079:1194140 + A632 B183 C44 5.39 -3.02 new transcription segment 1709 1365
THC0290_1019 kdpC CDS 1200577:1201131 + A1629 B539 C143 7.24 1.24 Potassium-transporting ATPase C subunit 1715 2945
THC0290_1027 gene 1208124:1208453 - A1452 B504 C142 8.13 1.23 Conserved membrane protein of unknown function (fragment) 1726 2644
THC0290_1030 gene 1209004:1209357 - A1375 B472 C137 11.29 1.04 Sterol desaturase family protein (fragment) 1730 2543
THC0290_1035 CDS 1212972:1213316 + A1762 B546 C143 14.62 1.07 Protein of unknown function 1736 3394
THC0290_N_0733 3prime 1213317:1213392 + A1762 B546 C143 8.84 1.93 new transcription segment 1737 3413
THC0290_N_0741 3prime-PT 1222587:1222769 + A164 B61 C19 7.95 1.15 new transcription segment 1756 204
THC0290_1048 CDS 1225034:1227307 - A1156 B395 C120 9.13 1.05 Protein of unknown function precursor, putative adhesin 1758 2190
THC0290_1054 CDS 1231465:1232691 - A1765 B546 C143 10.28 3.14 Protein of unknown function precursor containing a C-terminal secretion signal 1769 3479
THC0290_1055 CDS 1233132:1235285 + A556 B183 C44 8.50 -2.88 Probable outer membrane protein precursor 1770 805
THC0290_1056 CDS 1235407:1236027 + A556 B183 C44 10.49 -2.93 Protein of unknown function 1771 806
THC0290_N_0747 intra 1236028:1236085 + A556 B183 C44 9.39 -2.25 new transcription segment 1772 804
THC0290_1057 CDS 1236086:1237453 + A556 B183 C44 10.69 -2.56 Membrane protein containing an internal histidine kinase domain 1773 810
THC0290_1058 CDS 1237456:1237776 + A556 B183 C44 10.03 -1.68 Protein of unknown function 1774 811
THC0290_1059 CDS 1237798:1238103 + A556 B183 C44 10.65 -1.47 Protein of unknown function 1775 809
THC0290_1060 CDS 1238111:1238461 + A556 B183 C44 10.47 -1.62 Protein of unknown function 1776 812
THC0290_N_0748 intra 1238462:1238530 + A556 B183 C44 9.31 -1.83 new transcription segment 1777 807
THC0290_1061 CDS 1238531:1239292 + A556 B183 C44 9.70 -1.27 Two-component system response regulatory protein, LytTR family 1778 808
THC0290_1078 CDS 1255885:1257000 - A494 B173 C44 9.05 -1.02 Putative mannosyltransferase 1799 659
THC0290_1085 CDS 1265923:1266828 + A1243 B419 C125 9.25 1.34 Probable lipoprotein precursor 1812 2322
THC0290_1090 CDS 1270459:1271454 - A725 B207 C54 9.50 1.72 Probable M43 cytophagalysin family metalloprotease precursor 1819 1582
THC0290_N_0762 intra 1278815:1278864 + A354 B133 C37 5.03 -1.83 new transcription segment 1825 454
THC0290_1099 CDS 1283185:1284720 + A1792 B549 C143 10.47 1.53 Protein of unknown function 1836 3847
THC0290_N_0768 3prime 1284560:1285017 - A190 B69 C21 7.41 -1.12 new transcription segment 1837 236
THC0290_N_0769 intra 1284721:1285209 + A1794 B549 C143 8.49 1.36 new transcription segment 1838 3850
THC0290_1100 yojE CDS 1285018:1285905 - A572 B183 C44 8.08 -1.83 Probable permease YojE 1839 846
THC0290_N_0770 intra 1285919:1286213 - A754 B223 C61 8.29 -1.59 new transcription segment 1840 1628
THC0290_N_0771 Rfp49 indep 1288802:1288918 - A1765 B546 C143 7.54 1.26 new transcription segment 1843 3531
THC0290_1114 CDS 1299960:1300283 - A1721 B546 C143 10.29 5.02 Probable transcriptional regulator, ArsR family 1864 3174
THC0290_N_0785 3prime 1307664:1307713 + A1766 B546 C143 8.01 1.25 new transcription segment 1874 3564
THC0290_1122 CDS 1309549:1311003 - A581 B183 C44 9.35 -1.08 Probable modification methyltransferase 1877 883
THC0290_1124 CDS 1311834:1313342 - A578 B183 C44 8.62 -1.11 Protein of unknown function 1879 860
THC0290_N_0787 intra 1316615:1316949 - A1715 B546 C143 9.19 2.40 new transcription segment 1883 3157
THC0290_1135 CDS 1327350:1327610 - A1768 B546 C143 6.81 1.10 Hypothetical protein 1893 3711
THC0290_1137 CDS 1329295:1330215 - A1795 B549 C143 7.77 3.26 Probable transcriptional regulator, AraC family 1895 3873
THC0290_1138 CDS 1330262:1330645 - A1795 B549 C143 7.84 3.06 Hypothetical protein 1896 3857
THC0290_1149 gene 1338209:1338670 + A1744 B546 C143 5.53 1.90 Truncated protein, C-terminal region 1907 3229
THC0290_1150 CDS 1338848:1339387 + A1747 B546 C143 5.52 2.96 Probable transcriptional regulator, AraC family 1908 3267
THC0290_1151 CDS 1339398:1339592 + A1668 B542 C143 4.44 1.12 Hypothetical protein 1909 3052
THC0290_1159 CDS 1350968:1351213 + A1371 B470 C136 6.53 1.09 Probable transcriptional coactivator/pterin dehydratase 1917 2538
THC0290_1163 CDS 1354235:1354834 + A1528 B521 C143 5.11 2.14 Probable lipoprotein precursor 1921 2765
THC0290_1167 CDS 1358484:1360820 + A930 B291 C80 5.36 -1.36 Glycosyl transferase, group 1 family protein 1925 1866
THC0290_1169 CDS 1361836:1362495 + A1634 B540 C143 7.40 1.34 Probable transport-associated protein 1927 2956
THC0290_1174 CDS 1364836:1365252 + A1634 B540 C143 6.97 1.25 Probable OsmC family protein 1933 2957
THC0290_1175 gene 1365267:1365341 + A1193 B410 C123 7.72 3.01 Truncated protein N-terminal region 1934 2234
THC0290_1177 gene 1366017:1366154 + A1747 B546 C143 6.21 1.73 Truncated protein 1936 3305
THC0290_1193 CDS 1381373:1381627 + A1768 B546 C143 8.77 2.74 Hypothetical protein 1953 3714
THC0290_1194 CDS 1381701:1381925 + A1668 B542 C143 6.34 1.35 Hypothetical protein 1954 3053
THC0290_1195 CDS 1381938:1382327 + A1768 B546 C143 5.90 1.76 Hypothetical protein 1955 3708
THC0290_1200 CDS 1384769:1384954 + A1747 B546 C143 7.92 1.10 CsbD family protein 1960 3271
THC0290_1201 CDS 1384990:1385493 + A1765 B546 C143 8.00 1.06 Hypothetical lipoprotein precursor 1961 3467
THC0290_1202 CDS 1385642:1386292 + A1742 B546 C143 7.14 1.82 Protein of unknown function precursor 1962 3222
THC0290_1203 CDS 1386310:1386462 + A1311 B450 C132 7.12 1.54 Conserved exported protein of unknown function 1963 2453
THC0290_1204 CDS 1386496:1386726 + A1768 B546 C143 9.21 1.66 Hypothetical protein 1964 3689
THC0290_1205 CDS 1386748:1387101 + A1768 B546 C143 7.77 1.71 Hypothetical protein 1965 3690
THC0290_1206 CDS 1387098:1387430 + A1380 B474 C137 6.90 1.16 Hypothetical protein 1966 2548
THC0290_1207 CDS 1387510:1389336 - A1768 B546 C143 7.23 1.05 Protein of unknown function 1967 3716
THC0290_1223 CDS 1418395:1418796 - A1795 B549 C143 9.97 1.71 Protein of unknown function 2000 3874
THC0290_N_0801 3prime 1418443:1418638 + A502 B176 C44 5.72 -1.10 new transcription segment 2001 670
THC0290_1231 CDS 1425441:1426022 - A1542 B522 C143 8.22 -1.13 Probable transmembrane protein of unknown function 2013 2785
THC0290_1237 CDS 1429217:1429477 - A684 B192 C48 7.89 -2.15 Hypothetical transmembrane protein 2019 1484
THC0290_1238 CDS 1429483:1430496 - A684 B192 C48 6.31 -4.38 Cytochrome c oxidase family protein 2020 1485
THC0290_1239 CDS 1430503:1432671 - A688 B193 C48 7.37 -2.50 Cytochrome c oxidase family protein 2021 1494
THC0290_1242 CDS 1434834:1435964 - A707 B201 C52 9.55 -2.85 Probable membrane fusion efflux lipoprotein precursor 2025 1536
THC0290_1243 CDS 1435961:1436539 - A707 B201 C52 8.56 -3.79 Probable transcriptional regulator, TetR family 2026 1537
THC0290_N_0806 Rfp55 indep 1436072:1436459 + A1768 B546 C143 6.89 1.19 new transcription segment 2027 3667
THC0290_1244 CDS 1436703:1437329 - A1768 B546 C143 9.28 1.46 Probable transcriptional regulatory protein, Crp/Fnr family 2028 3709
THC0290_N_0809 intra 1437888:1437991 - A543 B180 C44 5.84 -3.26 new transcription segment 2031 765
THC0290_1245 CDS 1438036:1438314 - A545 B180 C44 11.14 -1.23 Thiol:disulfide interchange protein, C-terminal region 2032 772
THC0290_N_0811 intra 1438315:1438460 - A545 B180 C44 11.87 -1.37 new transcription segment 2033 774
THC0290_N_0814 Rfp56 indep 1444415:1444724 - A1768 B546 C143 7.25 2.20 new transcription segment 2041 3700
THC0290_N_0816 intra 1446727:1446954 - A1795 B549 C143 9.13 1.21 new transcription segment 2045 3872
THC0290_1253 CDS 1446955:1448118 - A1762 B546 C143 10.62 1.01 Probable two-component system response regulatory protein - glycosyl transferase, group 2 family protein 2046 3395
THC0290_1254 CDS 1448226:1451315 + A1664 B542 C143 7.65 1.77 Probable transmembrane protein 2047 3043
THC0290_1255 CDS 1451315:1452553 + A1874 B578 C149 7.60 1.88 Protein of unknown function precursor 2048 3976
THC0290_1256 CDS 1452537:1454093 + A1602 B535 C143 8.18 1.32 Glycoside hydrolase, family 5 2049 2882
THC0290_1257 CDS 1454090:1455256 - A1795 B549 C143 9.25 2.26 Glycosyl transferase, group 1 family protein 2050 3868
THC0290_1258 CDS 1455281:1456540 - A1795 B549 C143 7.58 2.37 Putative capsular polysaccharide biosynthesis protein 2051 3866
THC0290_N_0817 5prime 1457741:1458011 + A1769 B546 C143 9.67 -1.19 new transcription segment 2053 3746
THC0290_1260 acsA CDS 1458012:1459919 + A713 B202 C53 11.70 -1.06 Acetate--CoA ligase 2054 1549
THC0290_N_0821 3prime 1467104:1468011 - A1779 B546 C143 8.71 1.36 new transcription segment 2065 3813
THC0290_1270 CDS 1468900:1469292 + A1615 B535 C143 11.15 1.88 Protein of unknown function 2068 2917
THC0290_N_0822 3prime 1469293:1469476 + A1615 B535 C143 10.00 2.26 new transcription segment 2069 2918
THC0290_1273 hisA CDS 1470665:1471390 - A708 B202 C53 5.13 -1.32 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase 2072 1538
THC0290_N_0823 intra 1472127:1472214 - A708 B202 C53 4.66 -1.27 new transcription segment 2075 1539
THC0290_1276 hisC CDS 1473351:1474391 - A709 B202 C53 6.68 -1.05 Histidinol-phosphate transaminase 2077 1541
THC0290_N_0831 3prime 1485875:1486044 + A1642 B540 C143 7.60 1.15 new transcription segment 2094 2982
THC0290_1287 ppx CDS 1486086:1486976 - A1076 B360 C106 10.48 -1.03 Exopolyphosphatase 2096 2048
THC0290_1291 CDS 1490287:1490424 - A1698 B546 C143 6.20 2.19 Conserved protein of unknown function (fragment) 2102 3110
THC0290_N_0834 3prime-PT 1490841:1491055 - A1526 B521 C143 5.22 1.83 new transcription segment 2103 2760
THC0290_1293 CDS 1492056:1492418 - A601 B183 C44 10.87 -1.59 Protein of unknown function 2106 1174
THC0290_1294 CDS 1492421:1493350 - A601 B183 C44 11.89 -1.57 Probable UDP-N-acetylglucosamine acyltransferase 2107 1175
THC0290_1295 efp CDS 1493357:1493920 - A601 B183 C44 11.82 -1.31 Elongation factor P (EF-P) 2108 1173
THC0290_N_0837 intra 1493921:1493987 - A600 B183 C44 10.83 -1.07 new transcription segment 2109 1087
THC0290_N_0838 intra 1494771:1494824 - A600 B183 C44 11.42 -1.33 new transcription segment 2111 1082
THC0290_N_0840 Rfp57 indep 1497415:1497522 + A1768 B546 C143 7.44 1.50 new transcription segment 2116 3647
THC0290_1304 CDS 1504654:1505688 - A470 B170 C44 6.59 -2.36 Probable transcriptional regulator, AraC family 2125 617
THC0290_N_0845 3prime 1507414:1507684 + A570 B183 C44 5.86 -2.03 new transcription segment 2129 844
THC0290_1307 CDS 1507520:1509589 - A1775 B546 C143 8.06 1.00 Probable TonB-dependent outer membrane receptor precursor 2130 3800
THC0290_N_0846 intra 1509590:1509687 - A1775 B546 C143 8.65 1.30 new transcription segment 2131 3801
THC0290_1308 CDS 1509688:1510665 - A1775 B546 C143 7.79 1.14 Protein of unknown function precursor 2132 3799
THC0290_1309 gene 1510782:1511459 + A1765 B546 C143 11.51 2.01 Fragment of two-component system sensor histidine kinase (part 1) 2133 3489
THC0290_1311 gene 1512751:1513449 + A1765 B546 C143 9.07 2.85 Fragment of two-component system sensor histidine kinase (part 2) 2135 3491
THC0290_1320 CDS 1521863:1523305 - A600 B183 C44 11.34 -1.25 Phosphate transporter family protein 2144 1105
THC0290_1323 CDS 1525827:1527404 + A526 B180 C44 9.47 -1.24 Probable S41 family peptidase 2147 709
THC0290_1324 CDS 1527411:1529042 + A601 B183 C44 10.08 -1.56 Probable M1 family metalloprotease precursor 2148 1179
THC0290_1325 CDS 1529121:1529963 + A319 B119 C33 9.12 -1.26 Probable transcriptional regulator, AraC family 2149 405
THC0290_N_0847 intra 1529964:1530048 + A319 B119 C33 9.44 -1.97 new transcription segment 2150 406
THC0290_1326 ybcL CDS 1530049:1530588 + A692 B195 C50 12.69 3.62 Probable phospholipid-binding protein precursor YbcL 2151 1498
THC0290_1327 CDS 1530569:1530829 + A692 B195 C50 12.46 3.36 Protein of unknown function 2152 1499
THC0290_1332 CDS 1537097:1537567 + A1763 B546 C143 10.08 3.49 Protein of unknown function 2157 3441
THC0290_1333 CDS 1537570:1538268 + A1763 B546 C143 10.06 3.34 Probable short-chain type dehydrogenase 2158 3442
THC0290_1334 phrB1 CDS 1538431:1539717 + A1763 B546 C143 9.32 2.35 Deoxyribodipyrimidine photolyase PhrB1 2160 3436
THC0290_1335 CDS 1539932:1540345 + A1449 B502 C142 11.10 3.99 Probable two-component system response regulatory protein 2161 2640
THC0290_1336 CDS 1540353:1540895 + A1763 B546 C143 11.04 3.11 Protein of unknown function containing an heme NO Binding domain 2162 3430
THC0290_1337 CDS 1540897:1543509 + A1762 B546 C143 10.50 2.42 Two-component system sensor histidine kinase 2163 3388
THC0290_1338 CDS 1543512:1544648 + A1876 B578 C149 10.70 2.10 Protein of unknown function 2164 3979
THC0290_1339 CDS 1544648:1545673 + A1876 B578 C149 10.18 2.29 Probable two-component system sensor histidine kinase 2165 3980
THC0290_1340 CDS 1545673:1545990 + A1876 B578 C149 9.99 1.94 Probable two-component system histidine-containing phosphotransfer protein (HPt) 2166 3981
THC0290_1341 CDS 1546003:1546728 + A83 B38 C15 9.86 1.11 Two-component system response regulatory protein, LytTR family 2167 99
THC0290_N_0849 3prime 1546143:1546768 - A1665 B542 C143 8.46 2.14 new transcription segment 2168 3046
THC0290_N_0850 3prime 1546729:1546916 + A179 B65 C21 8.09 1.32 new transcription segment 2169 223
THC0290_1342 CDS 1546769:1548826 - A1669 B542 C143 9.56 1.24 Protein of unknown function precursor 2170 3057
THC0290_1343 CDS 1549155:1552811 - A1795 B549 C143 9.45 4.98 Protein of unknown function precursor containing PKD domains and a C-terminal secretion signal 2171 3855
THC0290_1344 CDS 1552913:1553296 - A1795 B549 C143 9.45 4.75 Transposase IS1 family 2172 3856
THC0290_1348 bfmBA CDS 1558467:1560443 - A600 B183 C44 11.28 -1.03 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 2180 1107
THC0290_N_0856 intra 1561715:1561857 + A459 B168 C44 10.29 -1.01 new transcription segment 2183 597
THC0290_N_0861 3prime 1567995:1568077 - A1770 B546 C143 10.89 1.14 new transcription segment 2196 3793
THC0290_1358 ung CDS 1568078:1568740 - A1768 B546 C143 9.31 1.41 Uracil-DNA glycosylase 2197 3718
THC0290_N_0865 3prime 1580293:1580351 + A1768 B546 C143 8.92 1.37 new transcription segment 2208 3722
THC0290_N_0867 3prime-PT 1580352:1580535 + A1676 B543 C143 6.87 1.72 new transcription segment 2210 3079
THC0290_1369 CDS 1581298:1582101 - A636 B183 C44 8.03 -1.44 Probable short-chain type dehydrogenase 2214 1373
THC0290_1370 CDS 1582125:1582283 - A636 B183 C44 7.04 -1.98 Truncated chloromuconate cycloisomerase 2215 1372
THC0290_N_0869 3prime 1582284:1582335 - A503 B176 C44 5.58 -2.90 new transcription segment 2216 671
THC0290_1371 CDS 1582522:1583574 + A315 B119 C33 9.44 -1.72 Putative glutamine cyclotransferase 2218 401
THC0290_1372 CDS 1584148:1584330 - A1458 B505 C142 11.89 1.61 Hypothetical protein 2221 2652
THC0290_1385 mscL CDS 1595085:1595501 + A601 B183 C44 13.83 -1.43 Large-conductance mechanosensitive channel 2241 1180
THC0290_N_0880 intra 1595502:1595628 + A611 B183 C44 9.80 -1.93 new transcription segment 2242 1288
THC0290_tRNA_0022 tRNA 1599447:1599524 + A1768 B546 C143 13.54 2.13 transfer RNA-Val 2249 3669
THC0290_N_0884 Rfp62 indep 1606778:1606919 + A1243 B419 C125 9.06 1.50 new transcription segment 2258 2325
THC0290_N_0891 3prime 1613876:1614068 + A504 B177 C44 8.92 -1.61 new transcription segment 2272 673
THC0290_N_0893 intra 1616095:1616417 - A601 B183 C44 8.55 -1.13 new transcription segment 2275 1128
THC0290_1399 CDS 1616418:1617146 - A601 B183 C44 8.97 -1.62 Probable transmembrane protein of unknown function 2276 1127
THC0290_1400 aldH CDS 1617164:1618492 - A600 B183 C44 9.28 -1.18 Aldehyde dehydrogenase 2277 1074
THC0290_1401 CDS 1618519:1619214 - A600 B183 C44 10.12 -1.15 Probable 23S rRNA pseudouridine synthase 2278 1077
THC0290_1402 CDS 1619248:1620525 - A600 B183 C44 9.13 -1.11 Probable S41 family peptidase precursor 2279 1100
THC0290_N_0903 Rfp64 indep 1635872:1635993 - A1768 B546 C143 11.83 2.34 new transcription segment 2299 3683
THC0290_1414 ltaE CDS 1636033:1637058 - A1768 B546 C143 10.84 1.35 Threonine aldolase 2300 3637
THC0290_N_0904 5prime 1637059:1637201 - A1768 B546 C143 10.44 1.25 new transcription segment 2301 3639
THC0290_N_0905 5prime 1637088:1637440 + A1563 B526 C143 13.25 1.09 new transcription segment 2302 2829
THC0290_1419 CDS 1642538:1643158 - A1561 B526 C143 9.98 1.22 Putative translation factor 2309 2824
THC0290_1421 CDS 1645706:1646227 + A609 B183 C44 9.70 -1.08 Probable transmembrane protein of unknown function 2312 1270
THC0290_1422 CDS 1646261:1647379 + A530 B180 C44 9.39 -1.13 Protein of unknown function 2313 721
THC0290_1424 CDS 1649508:1651811 + A1787 B549 C143 10.35 2.32 Probable aminotransferase 2316 3838
THC0290_N_0909 3prime 1651812:1652166 + A1795 B549 C143 9.46 2.13 new transcription segment 2317 3867
THC0290_1425 dnaK CDS 1652269:1654149 - A840 B254 C69 13.40 -2.87 Chaperone protein DnaK 2319 1755
THC0290_N_0917 intra 1658744:1659049 - A590 B183 C44 9.12 -1.25 new transcription segment 2327 937
THC0290_1430 CDS 1659050:1662235 - A581 B183 C44 10.15 -1.22 Putative N6 adenine-specific DNA methyltransferase 2328 891
THC0290_N_0918 intra 1662236:1662355 - A843 B255 C69 10.34 -1.76 new transcription segment 2329 1762
THC0290_1431 CDS 1662356:1662937 - A843 B255 C69 10.33 -1.14 Probable transmembrane protein of unknown function 2330 1761
THC0290_1433 CDS 1664543:1665136 + A1762 B546 C143 8.91 2.42 Protein of unknown function 2333 3408
THC0290_N_0923 3prime 1669052:1669388 + A1659 B542 C143 7.81 1.54 new transcription segment 2340 3032
THC0290_N_0929 3prime 1673625:1673962 + A1644 B540 C143 6.71 1.20 new transcription segment 2352 2990
THC0290_N_0930 intra 1675609:1675691 - A1765 B546 C143 10.23 1.69 new transcription segment 2354 3540
THC0290_1444 CDS 1675692:1676540 - A1762 B546 C143 11.38 1.51 Protein of unknown function 2355 3424
THC0290_N_0934 3prime-PT 1680444:1680996 - A1836 B563 C145 4.92 -1.19 new transcription segment 2362 3929
THC0290_N_0937 5prime 1681345:1681454 - A1762 B546 C143 8.36 1.48 new transcription segment 2368 3420
THC0290_1450 yuxK CDS 1683750:1684166 + A601 B183 C44 10.35 -1.26 Protein of unknown function YuxK 2373 1176
THC0290_1451 CDS 1684233:1684379 + A699 B199 C52 11.02 -3.91 Hypothetical protein 2376 1516
THC0290_1458 CDS 1691337:1691852 - A493 B173 C44 9.51 -1.25 Protein of unknown function 2386 657
THC0290_N_0946 intra 1695609:1695759 - A611 B183 C44 10.70 -1.52 new transcription segment 2389 1287
THC0290_1468 yjgF CDS 1704276:1704656 + A595 B183 C44 11.49 -1.89 Protein of unknown function YjgF 2401 966
THC0290_N_0953 3prime 1704683:1704758 - A1126 B376 C109 9.22 1.30 new transcription segment 2403 2158
THC0290_N_0956 intra 1711585:1711685 + A378 B144 C41 4.89 -1.43 new transcription segment 2409 484
THC0290_1473 CDS 1713087:1713590 + A611 B183 C44 9.64 -1.24 Probable transmembrane protein of unknown function 2411 1289
THC0290_N_0957 3prime-PT 1713144:1713623 - A128 B53 C18 5.85 -1.78 new transcription segment 2412 161
THC0290_N_0965 intra 1721778:1721907 + A1552 B523 C143 8.52 1.03 new transcription segment 2427 2804
THC0290_N_0969 5prime 1724967:1725040 - A1745 B546 C143 9.50 1.07 new transcription segment 2435 3242
THC0290_N_0970 intra 1725860:1725948 + A1500 B514 C143 9.04 1.45 new transcription segment 2437 2717
THC0290_N_0976 3prime 1730076:1730154 - A1573 B530 C143 9.60 2.63 new transcription segment 2449 2842
THC0290_1494 CDS 1730155:1732128 - A1761 B546 C143 11.48 1.32 Probable ribonuclease 2450 3382
THC0290_N_0977 5prime 1732129:1732257 - A1768 B546 C143 10.81 1.59 new transcription segment 2451 3627
THC0290_1496 CDS 1735654:1738056 + A536 B180 C44 12.09 -2.02 Putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits 2454 733
THC0290_N_0983 3prime 1741575:1741661 + A1765 B546 C143 9.73 2.69 new transcription segment 2461 3492
THC0290_1506 CDS 1747485:1748612 + A600 B183 C44 9.25 -1.01 Probable cysteine desulfurase 2471 1102
THC0290_N_0989 5prime 1752255:1752334 - A435 B165 C44 12.00 -1.22 new transcription segment 2476 562
THC0290_1509 CDS 1752478:1752975 + A1416 B488 C140 7.19 5.61 Protein of unknown function 2477 2595
THC0290_1510 gene 1752990:1753640 + A1416 B488 C140 8.20 5.03 Conserved exported protein of unknown function (fragment) 2479 2596
THC0290_1514 CDS 1759087:1759686 + A1416 B488 C140 10.53 4.21 Probable peroxiredoxin 2484 2593
THC0290_1515 CDS 1759690:1760178 + A1416 B488 C140 10.47 3.91 Protein of unknown function 2485 2594
THC0290_1516 CDS 1760166:1760876 + A1416 B488 C140 9.70 3.49 Protein of unknown function 2486 2592
THC0290_1517 gene 1760953:1761909 + A1416 B488 C140 6.85 3.07 Conserved protein of unknown function 2487 2597
THC0290_1520 CDS 1763992:1765833 + A789 B239 C67 11.58 1.10 Probable endonuclease precursor 2491 1678
THC0290_1526 CDS 1774415:1775356 - A1796 B549 C143 11.07 3.61 Protein of unknown function precursor 2501 3879
THC0290_1527 CDS 1775368:1782057 - A1796 B549 C143 11.90 3.84 Protein of unknown function precursor containing a C-terminal secretion signal. Putative adhesin 2502 3880
THC0290_N_0998 repeated_region 1782230:1782819 + A1766 B546 C143 7.40 2.00 new transcription segment 2504 3566
THC0290_N_0999 intra 1783775:1784020 - A600 B183 C44 10.43 -1.12 new transcription segment 2507 1065
THC0290_N_1000 intra 1785218:1785270 - A598 B183 C44 8.21 -1.21 new transcription segment 2510 996
THC0290_1531 CDS 1785271:1786122 - A598 B183 C44 9.28 -1.54 Probable outer membrane protein precursor, OmpA family 2511 995
THC0290_N_1004 3prime 1788343:1788481 - A1665 B542 C143 10.59 1.42 new transcription segment 2517 3045
THC0290_N_1005 5prime 1789837:1789892 + A75 B35 C14 12.94 -1.17 new transcription segment 2519 86
THC0290_1542 CDS 1796696:1797148 + A1765 B546 C143 10.25 5.80 Protein of unknown function 2535 3480
THC0290_1543 CDS 1797232:1798140 + A1765 B546 C143 11.35 2.17 Probable nucleoside-diphosphate sugar epimerase 2537 3481
THC0290_1544 grpE CDS 1798337:1798909 + A840 B254 C69 12.14 -2.09 Chaperone protein GrpE 2539 1753
THC0290_N_1015 intra 1798910:1798967 + A831 B252 C69 4.49 -1.27 new transcription segment 2540 1738
THC0290_1545 dnaJ CDS 1798968:1800092 + A840 B254 C69 12.08 -1.94 Chaperone protein DnaJ 2541 1754
THC0290_N_1019 intra 1801177:1801257 + A1552 B523 C143 12.41 3.48 new transcription segment 2545 2803
THC0290_N_1025 3prime 1804918:1804974 - A1552 B523 C143 6.20 2.52 new transcription segment 2555 2807
THC0290_N_1029 3prime 1808220:1808762 + A1152 B393 C120 7.52 1.38 new transcription segment 2563 2185
THC0290_N_1031 3prime 1811565:1811830 + A1643 B540 C143 8.72 1.43 new transcription segment 2568 2983
THC0290_tRNA_0029 tRNA 1813116:1813192 + A1684 B545 C143 12.46 1.22 transfer RNA-His 2573 3088
THC0290_N_1040 repeated_region 1817889:1818312 - A1008 B320 C87 6.02 -1.69 new transcription segment 2583 1963
THC0290_1569 CDS 1824808:1827336 + A1796 B549 C143 10.79 5.93 Probable TonB-dependent outer membrane siderophore receptor precursor 2592 3877
THC0290_1580 folE1 CDS 1836146:1836817 - A1350 B467 C136 11.82 1.25 GTP cyclohydrolase I 2609 2506
THC0290_1581 mrsA CDS 1836820:1837458 - A1751 B546 C143 12.15 1.60 Protein-methionine-S-oxide reductase MsrA 2610 3334
THC0290_1584 trmE CDS 1839466:1840854 + A1557 B526 C143 9.86 1.52 tRNA modification GTPase TrmE 2614 2817
THC0290_1586 CDS 1842055:1842597 + A1765 B546 C143 7.78 1.92 RNA polymerase ECF-type sigma factor 2618 3498
THC0290_1587 CDS 1842628:1843008 + A1765 B546 C143 8.41 2.22 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 2619 3499
THC0290_1588 CDS 1843019:1843477 + A1765 B546 C143 9.57 2.70 Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor 2620 3500
THC0290_N_1054 3prime 1843478:1843604 + A1765 B546 C143 9.57 3.34 new transcription segment 2621 3497
THC0290_1589 gene 1843630:1844010 - A1765 B546 C143 8.48 1.97 Truncated protein, C-terminal region (fragment) 2622 3487
THC0290_1590 gene 1844029:1844682 - A1765 B546 C143 8.82 1.15 Truncated protein, N-terminal region (fragment) 2624 3488
THC0290_1593 gene 1848100:1848249 - A1765 B546 C143 7.87 5.16 Truncated transposase ISNCY family, central region 2628 3508
THC0290_N_1057 5prime 1848250:1848475 - A1795 B549 C143 7.50 4.34 new transcription segment 2629 3871
THC0290_1594 CDS 1848581:1850773 - A1795 B549 C143 10.39 8.05 Protein of unknown function 2630 3865
THC0290_1595 CDS 1851066:1852952 + A1762 B546 C143 13.17 2.24 Protein of unknown function precursor, putative adhesin 2631 3405
THC0290_N_1058 intra 1852953:1853067 + A1762 B546 C143 11.55 2.38 new transcription segment 2632 3406
THC0290_N_1059 Rfp68 indep 1853069:1853412 + A1762 B546 C143 12.54 3.14 new transcription segment 2633 3407
THC0290_N_1062 5prime 1856154:1856259 - A926 B287 C78 7.16 -2.21 new transcription segment 2638 1861
THC0290_N_1065 intra 1859407:1859479 - A1518 B521 C143 11.43 2.27 new transcription segment 2644 2747
THC0290_N_1066 intra 1860611:1860781 - A1241 B419 C125 9.16 1.01 new transcription segment 2646 2318
THC0290_N_1072 5prime 1868837:1869005 - A838 B254 C69 9.15 -3.44 new transcription segment 2658 1747
THC0290_N_1082 intra 1882842:1883282 - A1768 B546 C143 9.93 1.15 new transcription segment 2681 3651
THC0290_N_1083 3prime 1885363:1885897 + A1217 B416 C125 7.98 1.16 new transcription segment 2684 2283
THC0290_N_1087 intra 1888625:1888779 + A1207 B415 C124 10.76 -1.54 new transcription segment 2693 2265
THC0290_1628 CDS 1888799:1889020 + A1207 B415 C124 13.45 -1.00 Protein of unknown function 2694 2264
THC0290_N_1088 3prime 1889021:1889095 + A1207 B415 C124 8.36 -2.34 new transcription segment 2695 2263
THC0290_1629 secA CDS 1889096:1892446 + A840 B254 C69 12.07 -2.00 Preprotein translocase SecA subunit 2696 1752
THC0290_1630 CDS 1892517:1893479 - A206 B76 C24 12.85 -1.27 Protein of unknown function precursor 2697 262
THC0290_N_1090 3prime-PT 1894530:1894615 - A206 B76 C24 9.98 -1.09 new transcription segment 2699 261
THC0290_1634 CDS 1896238:1896348 + A1760 B546 C143 11.51 1.83 Hypothetical protein 2705 3372
THC0290_N_1094 3prime 1896419:1896833 - A1665 B542 C143 9.44 1.44 new transcription segment 2706 3044
THC0290_N_1097 intra 1901071:1901159 - A1714 B546 C143 10.98 1.01 new transcription segment 2715 3156
THC0290_1640 CDS 1901160:1902068 - A1714 B546 C143 10.55 1.49 Probable transmembrane protein of unknown function 2716 3155
THC0290_1646 CDS 1909087:1909674 + A600 B183 C44 11.30 -1.26 Scramblase family protein 2728 1045
THC0290_N_1103 intra 1909675:1909760 + A601 B183 C44 12.11 -1.59 new transcription segment 2729 1133
THC0290_1647 CDS 1909761:1911260 + A601 B183 C44 10.65 -1.52 Hypothetical transmembrane protein 2730 1134
THC0290_N_1104 intra 1911261:1911481 + A612 B183 C44 9.70 -1.73 new transcription segment 2731 1295
THC0290_1648 CDS 1911482:1911874 + A601 B183 C44 10.43 -1.70 Protein of unknown function 2732 1135
THC0290_1649 CDS 1912055:1912162 + A601 B183 C44 9.41 -1.12 Hypothetical protein 2734 1131
THC0290_N_1106 3prime 1912769:1912987 + A601 B183 C44 7.93 -1.11 new transcription segment 2736 1116
THC0290_N_1108 3prime 1915355:1915609 + A858 B259 C70 7.27 -1.01 new transcription segment 2739 1781
THC0290_1652 yfbK CDS 1915596:1917491 - A1763 B546 C143 9.89 4.13 Probable outer membrane protein precursor YfbK 2740 3433
THC0290_1653 CDS 1917528:1918436 - A1763 B546 C143 9.00 3.22 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 2741 3434
THC0290_1654 CDS 1918439:1918975 - A1763 B546 C143 9.19 3.46 RNA polymerase ECF-type sigma factor 2742 3435
THC0290_N_1109 3prime-PT 1920516:1920593 - A794 B241 C67 5.50 -1.22 new transcription segment 2745 1683
THC0290_N_1112 3prime 1924112:1924383 + A1765 B546 C143 9.97 1.09 new transcription segment 2749 3533
THC0290_tRNA_0030 tRNA 1927023:1927100 + A1768 B546 C143 13.56 2.22 transfer RNA-Val 2755 3670
THC0290_N_1120 3prime 1932156:1932279 - A536 B180 C44 6.99 -2.89 new transcription segment 2764 732
THC0290_1668 vdh CDS 1932280:1933383 - A536 B180 C44 12.24 -3.09 Valine dehydrogenase 2765 734
THC0290_1672 secDF CDS 1936499:1939483 - A599 B183 C44 12.54 -1.52 Preprotein translocase SecD and SecF subunits 2769 1024
THC0290_N_1125 Rfp73 indep 1939566:1939699 + A1768 B546 C143 7.64 3.15 new transcription segment 2771 3684
THC0290_N_1130 intra 1947110:1947393 + A1747 B546 C143 9.06 1.58 new transcription segment 2781 3269
THC0290_N_1132 3prime 1949618:1949685 - A1346 B466 C135 7.39 1.13 new transcription segment 2785 2497
THC0290_1680 CDS 1949686:1951449 - A1749 B546 C143 9.34 1.39 Probable TonB-dependent outer membrane receptor precursor 2786 3320
THC0290_1681 CDS 1951511:1954522 - A1749 B546 C143 9.64 1.42 TPR-domain containing protein 2788 3327
THC0290_N_1134 Rfp74 indep 1954656:1954725 - A1749 B546 C143 8.07 2.12 new transcription segment 2789 3325
THC0290_N_1137 5prime 1957428:1957643 - A350 B129 C35 11.96 -1.20 new transcription segment 2795 450
THC0290_1685 CDS 1957762:1958214 + A1720 B546 C143 11.59 1.45 Probable transcriptional regulator, MarR-family 2796 3172
THC0290_N_1138 3prime 1959433:1959477 + A1720 B546 C143 7.36 1.79 new transcription segment 2799 3173
THC0290_N_1140 intra 1961109:1961220 + A718 B205 C53 5.56 -1.52 new transcription segment 2803 1560
THC0290_N_1143 intra 1965574:1965769 + A715 B202 C53 8.57 -1.55 new transcription segment 2811 1553
THC0290_1694 trpA CDS 1965770:1966531 + A715 B202 C53 8.63 -1.29 Tryptophan synthase, alpha subunit 2813 1552
THC0290_1701 CDS 1974131:1975327 + A683 B191 C48 8.45 -1.17 Protein of unknown function precursor 2826 1482
THC0290_1703 CDS 1976672:1977127 - A1768 B546 C143 10.73 1.07 Hypothetical transmembrane protein 2829 3699
THC0290_N_1150 intra 1977128:1977205 - A1768 B546 C143 11.96 1.43 new transcription segment 2830 3702
THC0290_1704 CDS 1977206:1977442 - A1768 B546 C143 11.77 1.02 Hypothetical transmembrane protein 2831 3662
THC0290_N_1151 repeated_region 1977443:1978208 - A1768 B546 C143 8.32 1.79 new transcription segment 2832 3596
THC0290_1706 CDS 1979849:1980568 + A608 B183 C44 8.28 -1.23 Hypothetical protein 2834 1263
THC0290_1707 CDS 1980570:1981727 + A532 B180 C44 8.12 -1.04 Probable type I restriction-modification system, DNA specificity domain protein 2835 724
THC0290_1708 CDS 1981738:1982421 + A532 B180 C44 7.67 -1.37 Hypothetical protein 2836 725
THC0290_1709 CDS 1982411:1982950 + A48 B27 C13 7.51 -1.21 Protein of unknown function 2837 55
THC0290_1710 CDS 1983089:1985917 + A600 B183 C44 8.68 -1.17 Probable type I restriction endonuclease 2840 1088
THC0290_1711 CDS 1986678:1987886 - A481 B171 C44 10.08 -1.92 Probable penicillin-binding protein precursor 2842 634
THC0290_N_1154 5prime 1987994:1988043 + A931 B292 C81 5.03 -1.66 new transcription segment 2843 1867
THC0290_N_1156 3prime 1990528:1990800 - A1715 B546 C143 9.02 1.61 new transcription segment 2847 3161
THC0290_N_1160 3prime 1993681:1993757 - A943 B298 C82 5.77 2.12 new transcription segment 2854 1882
THC0290_N_1161 Rfp78 indep 1995370:1995588 + A1768 B546 C143 8.22 2.18 new transcription segment 2856 3686
THC0290_N_1166 5prime 2005128:2005343 - A1768 B546 C143 9.10 1.22 new transcription segment 2869 3671
THC0290_1720 CDS 2005180:2006193 + A1779 B546 C143 13.38 1.49 Hypothetical lipoprotein precursor 2870 3819
THC0290_N_1167 intra 2006194:2006263 + A1779 B546 C143 11.46 1.99 new transcription segment 2871 3820
THC0290_1721 CDS 2006264:2007796 + A1779 B546 C143 11.92 1.16 Protein of unknown function precursor 2872 3818
THC0290_1722 CDS 2008149:2009450 + A967 B307 C84 10.75 2.30 Protein of unknown function 2874 1912
THC0290_N_1174 3prime 2016593:2016664 + A933 B292 C81 11.00 -2.50 new transcription segment 2884 1869
THC0290_1734 (dciA) CDS 2022210:2022506 - A1768 B546 C143 11.00 1.03 Involved in the control of replication initiation 2892 3675
THC0290_1735 CDS 2022508:2022927 - A1768 B546 C143 11.62 1.13 Protein of unknown function 2893 3676
THC0290_N_1177 5prime 2022928:2023018 - A1615 B535 C143 10.93 1.31 new transcription segment 2894 2920
THC0290_1736 CDS 2023096:2024181 + A1765 B546 C143 8.80 1.51 Probable penicillin-binding protein precursor 2895 3495
THC0290_N_1178 3prime 2024212:2024277 - A1714 B546 C143 7.65 1.04 new transcription segment 2896 3153
THC0290_N_1180 3prime 2033014:2033819 - A1765 B546 C143 8.20 3.02 new transcription segment 2906 3509
THC0290_1745 CDS 2033820:2034134 - A1768 B546 C143 8.90 3.14 Probable transcriptional regulator, HxlR family 2908 3599
THC0290_N_1184 3prime 2039320:2039368 + A1848 B568 C149 8.27 1.78 new transcription segment 2917 3946
THC0290_N_1190 Rfp79 indep 2044074:2044275 + A1768 B546 C143 9.63 2.86 new transcription segment 2931 3597
THC0290_N_1192 3prime 2048058:2048409 - A1839 B563 C145 6.81 1.31 new transcription segment 2938 3934
THC0290_1765 aroK CDS 2048410:2048928 - A1362 B469 C136 8.21 1.60 Shikimate kinase 2939 2524
THC0290_N_1193 3prime 2048419:2048605 + A1812 B556 C144 10.11 1.01 new transcription segment 2940 3901
THC0290_N_1194 5prime 2048925:2049055 + A1428 B496 C141 6.34 -1.49 new transcription segment 2941 2610
THC0290_1768 crtI CDS 2051837:2053300 + A1763 B546 C143 10.67 1.66 Phytoene dehydrogenase 2948 3446
THC0290_1769 crtB CDS 2053302:2054141 + A1763 B546 C143 10.31 1.74 Phytoene synthase 2949 3447
THC0290_1770 crtZ CDS 2054147:2054587 + A1763 B546 C143 11.01 2.05 Carotene hydroxylase 2950 3448
THC0290_1775 CDS 2057225:2058286 - A601 B183 C44 12.81 -2.07 Probable lipoprotein precursor 2957 1150
THC0290_1777 gpmA CDS 2060543:2061067 - A530 B180 C44 6.39 -1.61 Phosphoglycerate mutase 2960 720
THC0290_1778 cobS CDS 2061052:2061828 - A585 B183 C44 6.30 -1.05 Adenosylcobinamide-GDP ribazoletransferase 2961 908
THC0290_N_1199 Rfp80 indep 2063397:2064482 + A1779 B546 C143 8.21 1.21 new transcription segment 2963 3809
THC0290_N_1200 intra 2063540:2063723 - A513 B180 C44 8.59 1.05 new transcription segment 2964 685
THC0290_1783 CDS 2065947:2066975 + A948 B300 C82 8.31 1.20 Probable ABC-type iron(III)-transport system, permease component 2969 1887
THC0290_1786 CDS 2068911:2069726 + A1795 B549 C143 10.94 6.40 Probable transmembrane protein of unknown function 2972 3869
THC0290_N_1203 3prime 2074261:2074528 + A291 B107 C30 7.41 1.79 new transcription segment 2979 376
THC0290_N_1204 intra 2076042:2076157 - A675 B189 C46 6.05 -1.72 new transcription segment 2981 1456
THC0290_1792 CDS 2076158:2076652 - A470 B170 C44 9.53 -1.39 Putative acetyltransferase, GNAT family 2982 618
THC0290_N_1206 intra 2077689:2077767 - A452 B168 C44 6.47 -1.22 new transcription segment 2985 585
THC0290_N_1207 intra 2079135:2079235 - A1091 B367 C107 10.36 -1.21 new transcription segment 2987 2111
THC0290_N_1208 3prime 2080646:2081110 - A1088 B365 C107 9.03 -3.62 new transcription segment 2989 2092
THC0290_1796 CDS 2081111:2082283 - A1088 B365 C107 10.95 -4.56 Probable lipoprotein precursor 2990 2106
THC0290_N_1209 intra 2082313:2082391 - A1088 B365 C107 5.84 -3.98 new transcription segment 2991 2091
THC0290_1797 CDS 2082392:2083183 - A1088 B365 C107 9.11 -5.09 Protein of unknown function precursor 2992 2090
THC0290_1798 CDS 2083190:2083714 - A1088 B365 C107 8.83 -6.00 Protein of unknown function containing ankyrin repeat signature 2993 2103
THC0290_1799 CDS 2083726:2084730 - A1088 B365 C107 9.20 -5.18 Protein of unknown function 2994 2104
THC0290_1800 CDS 2084766:2085770 - A1088 B365 C107 9.76 -4.75 Protein of unknown function 2995 2105
THC0290_1801 CDS 2085799:2087151 - A1088 B365 C107 7.68 -5.63 Protein of unknown function 2996 2102
THC0290_1802 CDS 2087189:2087410 - A1088 B365 C107 9.13 -4.61 Hypothetical protein 2997 2100
THC0290_1803 apbE CDS 2087394:2088356 - A1088 B365 C107 8.39 -3.96 Membrane-associated protein involved in thiamine biosynthesis 2998 2101
THC0290_1804 CDS 2088365:2088802 - A1088 B365 C107 7.66 -4.19 Thioredoxin family protein 2999 2081
THC0290_1805 CDS 2088958:2090196 + A1088 B365 C107 11.86 -4.48 Protein of unknown function 3000 2097
THC0290_N_1210 intra 2090197:2090249 + A1088 B365 C107 7.85 -5.58 new transcription segment 3001 2093
THC0290_1806 irpA CDS 2090250:2091365 + A1088 B365 C107 12.75 -2.86 Iron-regulated protein A precursor 3002 2098
THC0290_1807 CDS 2091368:2092735 + A483 B172 C44 10.33 -2.98 Probable vitamin K-dependent gamma-carboxylase 3003 636
THC0290_1808 fecA CDS 2092716:2095151 + A483 B172 C44 9.74 -2.46 ABC-type iron(III) dicitrate-transport system component, TonB-dependent outer membrane receptor FecA precursor 3004 637
THC0290_1811 CDS 2096360:2096578 - A1088 B365 C107 6.80 -5.74 Protein of unknown function 3010 2096
THC0290_N_1214 3prime 2096579:2096690 - A1496 B512 C143 11.05 -2.46 new transcription segment 3011 2713
THC0290_1812 (hmuY) CDS 2096691:2097335 - A1088 B365 C107 12.19 -4.92 Putative heme binding lipoprotein precursor 3012 2089
THC0290_1813 CDS 2097360:2097836 - A1088 B365 C107 9.95 -5.46 Probable transmembrane protein of unknown function 3013 2086
THC0290_1814 CDS 2097857:2099929 - A1088 B365 C107 8.24 -3.48 Probable TonB-dependent outer membrane receptor precursor 3014 2082
THC0290_1815 CDS 2100027:2100941 + A1088 B365 C107 11.51 -4.38 Protein of unknown function precursor 3015 2080
THC0290_1816 CDS 2100947:2101285 + A1088 B365 C107 10.55 -5.10 Protein of unknown function 3016 2087
THC0290_N_1217 5prime 2103281:2103429 + A1768 B546 C143 11.01 2.65 new transcription segment 3020 3624
THC0290_1818 CDS 2103430:2107788 + A1762 B546 C143 10.79 5.28 Protein of unknown function precursor, putative adhesin 3021 3404
THC0290_1819 CDS 2107930:2110392 + A777 B236 C67 11.16 1.35 Probable TonB-dependent outer membrane receptor precursor 3022 1663
THC0290_1824 CDS 2113997:2115304 - A1763 B546 C143 12.72 2.07 Protein of unknown function 3028 3437
THC0290_1825 CDS 2115307:2115978 - A1763 B546 C143 12.13 2.66 Protein of unknown function 3029 3438
THC0290_1828 htpG CDS 2117483:2119381 + A840 B254 C69 11.68 -3.00 Chaperone protein HtpG 3033 1756
THC0290_1829 CDS 2119432:2121534 - A764 B228 C63 8.79 1.35 Probable TonB-dependent outer membrane receptor precursor 3034 1649
THC0290_1830 CDS 2122074:2123462 + A1765 B546 C143 8.16 2.61 Protein of unknown function 3035 3496
THC0290_1831 CDS 2123616:2124782 + A1765 B546 C143 7.68 2.74 Twin-arginine translocation pathway signal sequence domain protein precusor 3036 3494
THC0290_1832 fjo20 CDS 2124849:2125745 + A1455 B504 C142 9.80 1.89 Probable drug/metabolite-transporting permease Fjo20 3037 2647
THC0290_N_1223 3prime 2125746:2125970 + A1518 B521 C143 9.51 2.22 new transcription segment 3038 2748
THC0290_N_1225 3prime 2131021:2131131 - A1518 B521 C143 8.61 2.17 new transcription segment 3043 2749
THC0290_N_1226 3prime 2137365:2137479 - A1747 B546 C143 9.95 2.04 new transcription segment 3050 3310
THC0290_1838 CDS 2138241:2139329 + A399 B152 C42 11.48 -1.08 Probable M42 family peptidase 3052 509
THC0290_N_1240 5prime 2152054:2152137 + A1868 B577 C149 11.37 5.38 new transcription segment 3079 3970
THC0290_1856 CDS 2156568:2157035 - A1768 B546 C143 11.31 1.02 Probable transmembrane protein of unknown function 3087 3694
THC0290_N_1245 3prime 2159359:2159621 + A1840 B563 C145 9.00 1.03 new transcription segment 3091 3935
THC0290_N_1246 3prime 2159375:2159422 - A1552 B523 C143 7.85 1.22 new transcription segment 3092 2808
THC0290_1863 CDS 2162962:2163354 + A266 B95 C28 11.92 -1.20 Protein of unknown function 3099 349
THC0290_N_1250 3prime 2163355:2164120 + A662 B186 C46 7.72 -1.81 new transcription segment 3101 1436
THC0290_N_1251 repeated_region 2165822:2165979 - A1663 B542 C143 14.11 1.32 new transcription segment 3104 3037
THC0290_N_1252 intra 2165981:2166072 - A410 B155 C43 6.61 -2.16 new transcription segment 3105 525
THC0290_1866 CDS 2166073:2166717 - A482 B172 C44 12.22 -1.36 Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer 3106 635
THC0290_1867 CDS 2167096:2167740 - A581 B183 C44 12.26 -2.00 Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer 3107 892
THC0290_1868 CDS 2168095:2168679 - A1749 B546 C143 10.22 1.72 RNA polymerase ECF-type sigma factor 3109 3328
THC0290_N_1256 5prime 2172257:2172324 + A1243 B419 C125 11.22 1.43 new transcription segment 3113 2331
THC0290_1870 CDS 2172325:2172963 + A1243 B419 C125 10.90 1.58 Protein of unknown function precursor 3114 2330
THC0290_N_1257 3prime 2172964:2173053 + A1243 B419 C125 7.16 2.59 new transcription segment 3115 2329
THC0290_N_1264 3prime 2191301:2191847 + A1869 B577 C149 8.89 2.38 new transcription segment 3137 3971
THC0290_N_1268 3prime-PT 2197563:2197791 - A695 B197 C51 7.20 1.96 new transcription segment 3149 1503
THC0290_N_1269 3prime 2197792:2197955 - A1765 B546 C143 9.49 2.51 new transcription segment 3151 3478
THC0290_1892 ykuF CDS 2197956:2198819 - A1406 B484 C140 12.06 2.64 Hypothetical oxidoreductase YkuF 3152 2580
THC0290_N_1277 intra 2208742:2209060 + A1172 B403 C122 9.62 -1.05 new transcription segment 3167 2208
THC0290_miscRNA_0049 Rfp82 misc_RNA 2215650:2215756 + A1768 B546 C143 13.42 1.85 6S-Flavo RNA 3178 3730
THC0290_N_1288 3prime-PT 2222573:2222733 - A1665 B542 C143 8.79 3.91 new transcription segment 3189 3047
THC0290_1913 CDS 2222771:2223451 - A1768 B546 C143 12.47 2.59 Probable transcriptional regulatory protein, Crp/Fnr family 3190 3678
THC0290_1914 ccoI CDS 2223560:2225938 + A701 B199 C52 9.09 -3.15 Probable cytochrome cbb3 oxidase maturation protein CcoI 3191 1528
THC0290_N_1290 intra 2225939:2225999 + A700 B199 C52 8.86 -5.60 new transcription segment 3192 1525
THC0290_1915 ccoS CDS 2226015:2226212 + A700 B199 C52 11.41 -5.80 Probable cytochrome cbb3 oxidase maturation protein CcoS 3193 1526
THC0290_1916 CDS 2226196:2227179 + A700 B199 C52 11.45 -5.64 Probable acyl-[acyl-carrier-protein] desaturase 3194 1527
THC0290_N_1291 intra 2227180:2227238 + A700 B199 C52 11.44 -5.69 new transcription segment 3195 1524
THC0290_1917 ccoN/ccoO CDS 2227239:2229419 + A700 B199 C52 11.09 -4.35 Cytochrome c oxidase, cbb3-type, subunit I and II 3196 1521
THC0290_N_1292 intra 2229420:2229495 + A700 B199 C52 10.93 -4.11 new transcription segment 3197 1520
THC0290_1919 ccoP CDS 2229694:2230629 + A700 B199 C52 10.97 -3.07 Cytochrome c oxidase, cbb3-type, subunit III 3199 1522
THC0290_N_1293 intra 2232523:2232613 + A698 B198 C52 9.12 -3.03 new transcription segment 3202 1513
THC0290_1922 CDS 2232614:2233318 + A698 B198 C52 8.57 -1.88 Probable transmembrane protein of unknown function 3203 1515
THC0290_1923 CDS 2233345:2233575 + A698 B198 C52 9.38 -2.20 Protein of unknown function 3204 1512
THC0290_1924 hemN CDS 2233612:2234976 - A701 B199 C52 9.99 -4.72 Oxygen-independent coproporphyrinogen III oxidase HemN 3205 1529
THC0290_N_1296 3prime 2237610:2237884 - A624 B183 C44 9.50 -1.48 new transcription segment 3207 1339
THC0290_N_1298 3prime 2240124:2240177 - A297 B110 C31 5.18 -1.22 new transcription segment 3211 382
THC0290_1930 CDS 2243685:2245619 - A1102 B370 C109 13.63 1.16 Probable outer membrane protein precursor, OmpA family 3214 2124
THC0290_1931 CDS 2245630:2246544 - A1102 B370 C109 13.63 1.54 Protein of unknown function precursor 3215 2126
THC0290_N_1300 5prime 2252602:2252830 - A1603 B535 C143 13.32 1.45 new transcription segment 3217 2885
THC0290_N_1301 intra 2254649:2254699 + A40 B24 C12 4.59 -1.48 new transcription segment 3220 47
THC0290_1939 rplJ CDS 2264685:2265185 - A638 B183 C44 14.44 -1.01 50S ribosomal protein L10 3231 1385
THC0290_tRNA_0041 tRNA 2267163:2267236 - A1769 B546 C143 11.24 1.82 transfer RNA-Trp 3237 3758
THC0290_N_1310 3prime 2267237:2267297 - A954 B302 C82 10.60 2.39 new transcription segment 3238 1893
THC0290_N_1313 intra 2268783:2268920 - A792 B240 C67 10.90 1.06 new transcription segment 3244 1681
THC0290_tRNA_0044 tRNA 2268921:2268997 - A1769 B546 C143 12.50 1.65 transfer RNA-Thr 3245 3767
THC0290_N_1314 intra 2268998:2269087 - A1779 B546 C143 9.36 1.49 new transcription segment 3246 3816
THC0290_1950 CDS 2272914:2273141 - A1762 B546 C143 11.02 1.97 Hypothetical protein 3255 3419
THC0290_N_1318 5prime 2273142:2273206 - A1768 B546 C143 13.13 1.61 new transcription segment 3256 3660
THC0290_1952 dnaQ CDS 2274767:2275249 - A1447 B502 C142 8.69 1.28 Probable DNA polymerase III, epsilon subunit 3260 2633
THC0290_1953 CDS 2275932:2277293 - A598 B183 C44 11.54 -1.18 Cysteine synthase/cystathionine beta-synthase family protein 3262 994
THC0290_N_1322 intra 2277329:2277486 - A379 B144 C41 6.86 -1.43 new transcription segment 3263 485
THC0290_1958 lipB CDS 2285150:2285881 - A1768 B546 C143 10.58 1.14 Lipoyl(octanoyl) transferase 3270 3626
THC0290_N_1327 3prime 2288792:2289024 - A1270 B425 C125 12.39 -1.09 new transcription segment 3276 2404
THC0290_N_1329 intra 2292157:2292654 - A1779 B546 C143 10.85 1.01 new transcription segment 3281 3812
THC0290_1967 CDS 2295152:2295868 + A527 B180 C44 10.51 -1.05 Probable methyltransferase 3286 714
THC0290_N_1331 3prime-PT 2295401:2295816 - A1644 B540 C143 6.80 2.23 new transcription segment 3287 2991
THC0290_1968 CDS 2295865:2296506 - A1768 B546 C143 11.25 2.57 Protein of unknown function 3288 3712
THC0290_N_1334 5prime 2296507:2296565 - A1768 B546 C143 9.12 3.81 new transcription segment 3290 3713
THC0290_N_1336 intra 2301544:2301764 + A1587 B532 C143 10.41 -1.92 new transcription segment 3298 2860
THC0290_1974 gapA2 CDS 2301796:2303244 + A595 B183 C44 13.44 -1.49 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 3299 970
THC0290_N_1340 Rfp83 indep 2307904:2308585 - A1747 B546 C143 8.07 2.07 new transcription segment 3308 3309
THC0290_1984 CDS 2311541:2311834 + A1768 B546 C143 10.40 1.09 Protein of unknown function 3316 3619
THC0290_1985 CDS 2311840:2312199 + A1768 B546 C143 9.71 1.05 Probable transcriptional regulator, XRE family 3317 3620
THC0290_N_1344 3prime 2312200:2312884 + A1765 B546 C143 8.13 1.88 new transcription segment 3319 3524
THC0290_1986 mscS3 CDS 2312225:2313022 - A30 B17 C8 8.87 1.11 Probable small-conductance mechanosensitive ion channel MscS3 3320 36
THC0290_1988 CDS 2314643:2314909 - A1747 B546 C143 10.13 1.28 Protein of unknown function 3322 3252
THC0290_1989 CDS 2314906:2315157 - A1747 B546 C143 10.24 1.26 Hypothetical protein 3323 3253
THC0290_1990 CDS 2315256:2315495 + A1768 B546 C143 9.39 1.61 Protein of unknown function 3324 3715
THC0290_N_1346 3prime 2315675:2316164 - A1101 B370 C109 11.05 1.63 new transcription segment 3325 2122
THC0290_1993 tatC CDS 2319411:2320235 + A595 B183 C44 10.11 -1.05 Sec-independent protein secretion pathway component TatC 3329 963
THC0290_N_1349 3prime 2325837:2326693 + A1749 B546 C143 8.01 1.64 new transcription segment 3337 3319
THC0290_2004 CDS 2330607:2331686 - A581 B183 C44 7.66 -1.18 Glycosyl transferase, group 1 family protein 3343 889
THC0290_2005 CDS 2331683:2332801 - A578 B183 C44 8.14 -1.07 Glycosyl transferase, group 1 family protein 3344 862
THC0290_2008 CDS 2334166:2335158 - A581 B183 C44 7.38 -2.39 Glycosyl transferase, group 2 family protein 3347 896
THC0290_2009 CDS 2335155:2336702 - A581 B183 C44 7.50 -2.31 Glycosyl transferase, group 2 family protein 3348 897
THC0290_2010 CDS 2336699:2337838 - A600 B183 C44 8.42 -2.28 Glycosyl transferase, group 1 family protein 3349 1068
THC0290_2011 CDS 2337840:2338400 - A600 B183 C44 7.91 -2.23 Hexapeptide transferase family protein 3350 1067
THC0290_2012 CDS 2338393:2339964 - A600 B183 C44 8.09 -1.52 Protein of unknown function 3351 1069
THC0290_2013 neuC CDS 2339964:2341088 - A600 B183 C44 8.69 -1.24 UDP-N-acetylglucosamine 2-epimerase 3353 1073
THC0290_2015 neuA CDS 2342191:2342862 - A605 B183 C44 8.74 -1.41 N-acylneuraminate cytidylyltransferase 3355 1242
THC0290_2016 CDS 2342852:2343760 - A600 B183 C44 8.74 -1.36 Glycosyl transferase, group 2 family protein 3356 1066
THC0290_2017 CDS 2343757:2344968 - A601 B183 C44 9.26 -1.54 Protein of unknown function 3357 1151
THC0290_2018 CDS 2344970:2345884 - A533 B180 C44 8.66 -1.14 Glycosyl transferase, group 2 family protein 3358 726
THC0290_2019 CDS 2345874:2346776 - A631 B183 C44 8.36 -1.21 Glycosyl transferase, group 2 family protein 3359 1363
THC0290_2020 CDS 2346789:2348045 - A581 B183 C44 8.18 -1.82 Glycosyl transferase, group 4 family protein 3360 885
THC0290_2021 CDS 2348054:2349070 - A580 B183 C44 7.82 -1.14 Probable transmembrane protein of unknown function 3361 877
THC0290_2022 CDS 2349086:2350084 - A581 B183 C44 8.92 -1.49 Glycosyl transferase, group 2 family protein 3362 887
THC0290_2023 CDS 2350078:2351235 - A581 B183 C44 9.85 -1.15 Glycosyl transferase, group 1 family protein 3363 888
THC0290_2026 CDS 2352980:2353666 - A618 B183 C44 10.01 -1.14 Protein of unknown function 3366 1324
THC0290_2027 rfbB CDS 2353670:2354929 - A479 B171 C44 10.29 -1.04 Probable ABC-type polysaccharide/polyol phosphate transport system, ATPase component 3367 632
THC0290_N_1355 3prime 2356042:2356382 - A1088 B365 C107 7.07 -2.24 new transcription segment 3371 2084
THC0290_2029 CDS 2356383:2357288 - A1088 B365 C107 9.11 -3.16 Protein of unknown function precursor 3372 2083
THC0290_2030 CDS 2357857:2358465 + A1088 B365 C107 6.73 -3.99 Hypothetical lipoprotein precursor 3373 2107
THC0290_2031 CDS 2358462:2359160 + A1088 B365 C107 7.64 -3.10 Hypothetical protein precursor 3374 2099
THC0290_2032 CDS 2359616:2360341 + A1765 B546 C143 10.88 1.46 Phosphotyrosine protein phosphatase probably involved in exopolysaccharide biosynthesis 3376 3464
THC0290_2033 CDS 2360376:2362736 - A601 B183 C44 10.78 -1.33 Probable tyrosine-protein kinase involved in exopolysaccharide biosynthesis 3378 1157
THC0290_2034 CDS 2362745:2363542 - A601 B183 C44 11.27 -1.06 Probable polysaccharide exporter lipoprotein precursor 3379 1159
THC0290_N_1359 intra 2363543:2363597 - A601 B183 C44 9.42 -1.04 new transcription segment 3380 1118
THC0290_2039 CDS 2370030:2370854 - A580 B183 C44 11.25 -1.10 Probable glycosyl transferase, group 2 family protein 3389 879
THC0290_2040 CDS 2370856:2371650 - A601 B183 C44 10.65 -1.84 Glycosyl transferase, group 2 family protein 3390 1167
THC0290_2043 CDS 2373865:2375328 - A580 B183 C44 9.31 -1.52 Probable transmembrane protein. Putative polysaccharide export protein 3393 871
THC0290_2045 CDS 2376178:2377044 - A601 B183 C44 10.27 -1.59 Probable acetyltransferase 3395 1161
THC0290_2046 CDS 2377049:2378104 - A601 B183 C44 11.03 -1.37 Probable aminotransferase 3396 1164
THC0290_2051 ugd CDS 2382230:2383606 - A581 B183 C44 11.26 -1.01 UDP-glucose 6-dehydrogenase 3402 893
THC0290_2052 wbpO CDS 2383638:2384909 - A605 B183 C44 10.53 -1.33 UDP-N-acetyl-D-galactosamine dehydrogenase 3403 1226
THC0290_N_1368 3prime 2391503:2391614 - A1575 B530 C143 11.90 1.67 new transcription segment 3412 2846
THC0290_2058 CDS 2391615:2391980 - A1768 B546 C143 10.62 1.22 Protein of unknown function 3413 3591
THC0290_2059 CDS 2392109:2392732 + A1762 B546 C143 11.95 1.97 MarC family integral membrane protein 3414 3409
THC0290_N_1371 intra 2395227:2395305 - A1851 B569 C149 11.16 1.06 new transcription segment 3421 3949
THC0290_N_1372 3prime 2396621:2397103 - A598 B183 C44 9.35 -2.88 new transcription segment 3423 990
THC0290_2067 rplQ CDS 2399857:2400345 - A599 B183 C44 14.58 -1.52 50S ribosomal protein L17 3430 1025
THC0290_N_1377 intra 2400346:2400409 - A601 B183 C44 15.06 -1.12 new transcription segment 3431 1146
THC0290_2068 rpoA CDS 2400410:2401402 - A599 B183 C44 14.46 -1.12 DNA-directed RNA polymerase alpha subunit RpoA 3432 1016
THC0290_2100 CDS 2419224:2422433 + A1796 B549 C143 13.71 4.15 SusC/RagA family TonB-dependent receptor precursor, Omp121 family 3470 3882
THC0290_2101 CDS 2422448:2423926 + A1796 B549 C143 13.61 4.35 SusD/RagB family lipoprotein precursor 3471 3883
THC0290_N_1385 3prime 2423927:2423992 + A1786 B549 C143 7.27 5.66 new transcription segment 3473 3837
THC0290_N_1388 5prime 2425655:2425773 - A1747 B546 C143 7.45 1.37 new transcription segment 3478 3313
THC0290_N_1390 intra 2428899:2428992 - A601 B183 C44 8.85 -1.83 new transcription segment 3483 1138
THC0290_2110 CDS 2431971:2434121 - A600 B183 C44 10.50 -1.49 Protein of unknown function precursor, putative S46 family serine protease 3488 1099
THC0290_2111 CDS 2434311:2434772 + A1795 B549 C143 10.22 4.38 Protein of unknown function containing LysM domain 3489 3858
THC0290_N_1398 3prime 2443579:2443958 - A1644 B540 C143 7.70 1.76 new transcription segment 3507 2992
THC0290_2121 CDS 2443959:2444504 - A1768 B546 C143 10.56 1.53 Hypothetical protein 3508 3580
THC0290_2122 CDS 2444507:2445007 - A1768 B546 C143 12.56 1.23 Uncharacterized phage-associated protein 3510 3581
THC0290_2123 gene 2445223:2445369 + A1768 B546 C143 8.71 1.29 Conserved protein of unknown function (fragment) 3511 3696
THC0290_N_1404 3prime 2453557:2454630 + A1788 B549 C143 8.86 1.03 new transcription segment 3524 3839
THC0290_N_1405 5prime 2456890:2457173 + A1699 B546 C143 10.74 1.14 new transcription segment 3527 3112
THC0290_N_1406 3prime 2458688:2458791 + A1685 B545 C143 10.54 1.39 new transcription segment 3530 3090
THC0290_N_1408 intra 2461950:2462196 - A1747 B546 C143 9.38 1.15 new transcription segment 3535 3261
THC0290_2146 porU CDS 2469452:2473288 - A1749 B546 C143 10.34 1.10 Por secretion system protein PorU precursor. C-terminal signal peptidase 3548 3322
THC0290_N_1414 5prime 2473389:2473464 + A1749 B546 C143 11.94 2.14 new transcription segment 3549 3324
THC0290_N_1416 3prime 2475219:2475302 + A1677 B543 C143 5.55 1.09 new transcription segment 3552 3080
THC0290_N_1418 3prime 2486848:2487333 + A1218 B416 C125 7.13 1.69 new transcription segment 3564 2285
THC0290_N_1421 3prime 2488233:2488361 + A1578 B530 C143 7.43 2.89 new transcription segment 3569 2849
THC0290_2154 CDS 2488537:2488929 - A1795 B549 C143 11.72 2.24 Putative transporter precursor 3570 3870
THC0290_2155 ygcF CDS 2489452:2490084 - A1580 B530 C143 11.27 1.28 Protein of unknown function YgcF 3571 2852
THC0290_2156 CDS 2490693:2491313 + A1086 B365 C107 9.65 -5.51 Protein of unknown function precursor 3572 2077
THC0290_2157 CDS 2491341:2491841 + A483 B172 C44 9.29 -5.71 Protein of unknown function 3573 640
THC0290_N_1422 intra 2491842:2492026 + A483 B172 C44 10.44 -5.96 new transcription segment 3574 641
THC0290_2158 CDS 2492027:2495248 + A483 B172 C44 11.38 -4.97 Uncharacterized protein precursor. Probable phage protein. 3575 639
THC0290_N_1423 3prime 2495249:2495787 + A1086 B365 C107 8.13 -3.54 new transcription segment 3576 2078
THC0290_2174 nuoN CDS 2512490:2513857 - A601 B183 C44 10.07 -1.28 NADH dehydrogenase I, N subunit 3601 1184
THC0290_2177 nuoK CDS 2517247:2517567 - A629 B183 C44 10.83 -1.21 NADH dehydrogenase I, K subunit 3604 1354
THC0290_N_1437 5prime 2526804:2526891 - A1422 B492 C141 5.00 -2.04 new transcription segment 3619 2604
THC0290_N_1439 3prime 2534669:2535271 - A1645 B540 C143 8.40 1.26 new transcription segment 3623 2995
THC0290_N_1442 3prime 2542233:2542290 + A1571 B529 C143 7.07 2.59 new transcription segment 3630 2839
THC0290_N_1444 repeated_region 2542312:2542603 - A1828 B560 C145 6.79 1.24 new transcription segment 3632 3921
THC0290_2196 gene 2542604:2542744 - A1768 B546 C143 10.17 1.37 protein of unknown function (fragment) 3633 3704
THC0290_N_1445 repeated_region 2542745:2542795 - A1768 B546 C143 10.49 1.90 new transcription segment 3634 3706
THC0290_2197 gene 2542796:2543170 - A1768 B546 C143 10.19 1.86 protein of unknown function (fragment) 3635 3705
THC0290_N_1449 3prime 2545798:2545854 + A1528 B521 C143 6.04 1.68 new transcription segment 3640 2764
THC0290_N_1452 intra 2550027:2550445 + A1082 B364 C107 6.77 -1.44 new transcription segment 3645 2055
THC0290_N_1453 3prime 2551193:2551513 - A1842 B563 C145 8.05 1.18 new transcription segment 3647 3939
THC0290_N_1460 intra 2561023:2561233 - A1657 B542 C143 7.83 1.04 new transcription segment 3661 3028
THC0290_N_1461 intra 2562233:2562422 - A581 B183 C44 5.18 -2.48 new transcription segment 3663 895
THC0290_2210 CDS 2562423:2563721 - A601 B183 C44 8.44 -2.10 Probable coenzyme F390 synthetase 3664 1166
THC0290_2211 CDS 2563718:2565388 - A578 B183 C44 7.50 -1.01 Protein of unknown function 3665 863
THC0290_2213 CDS 2566912:2570595 - A559 B183 C44 7.02 -1.44 Probable bifunctional protein : exporter and 1-acyl-sn-glycerol-3-phosphate acyltransferase precursor 3667 821
THC0290_2214 CDS 2570599:2571780 - A558 B183 C44 8.85 -1.77 Glycosyl transferase, group 2 family protein 3668 815
THC0290_2215 CDS 2571796:2572281 - A623 B183 C44 10.11 -1.16 Protein of unknown function 3669 1337
THC0290_2216 CDS 2572284:2572655 - A623 B183 C44 11.04 -1.05 Probable dehydratase 3670 1338
THC0290_N_1463 intra 2579278:2579459 - A600 B183 C44 11.18 -1.15 new transcription segment 3679 1093
THC0290_2225 CDS 2579460:2579717 - A600 B183 C44 10.70 -1.33 Acyl carrier protein 3680 1089
THC0290_2226 CDS 2579719:2580336 - A601 B183 C44 8.95 -1.58 Protein of unknown function 3681 1125
THC0290_2227 CDS 2580336:2581472 - A581 B183 C44 8.37 -1.18 3-oxoacyl-(acyl-carrier-protein) synthase 3682 898
THC0290_2235 darC2 CDS 2587051:2587512 - A634 B183 C44 9.54 -1.02 Probable acyl carrier protein involved in flexirubin-type pigment biosynthesis DarC2 3690 1369
THC0290_N_1470 5prime 2602284:2602336 + A496 B175 C44 6.76 -1.40 new transcription segment 3709 662
THC0290_N_1478 3prime-PT 2617365:2617476 - A1252 B419 C125 7.53 1.12 new transcription segment 3730 2371
THC0290_N_1480 3prime 2617554:2617695 + A1808 B556 C144 6.87 1.68 new transcription segment 3732 3896
THC0290_N_1481 Rfp86 indep 2617697:2617845 + A1653 B542 C143 6.08 2.48 new transcription segment 3733 3022
THC0290_2280 tag CDS 2636996:2637550 - A1762 B546 C143 11.14 1.04 DNA-3-methyladenine glycosylase I 3760 3423
THC0290_2289 leuS CDS 2643489:2646326 + A601 B183 C44 9.69 -1.14 Leucine--tRNA ligase 3775 1154
THC0290_N_1496 intra 2646327:2646449 + A598 B183 C44 7.40 -1.62 new transcription segment 3776 999
THC0290_N_1497 3prime 2646734:2647346 - A1765 B546 C143 7.20 2.30 new transcription segment 3778 3506
THC0290_N_1499 5prime 2647825:2647930 + A906 B281 C77 8.14 -1.89 new transcription segment 3781 1837
THC0290_2292 greA CDS 2647931:2648407 + A512 B179 C44 10.99 -1.61 Transcription elongation factor GreA 3782 683
THC0290_2293 CDS 2648410:2648799 + A512 B179 C44 11.06 -1.59 HIT family protein 3783 684
THC0290_N_1500 3prime 2648800:2648862 + A99 B44 C16 10.41 -2.83 new transcription segment 3784 121
THC0290_2294 pop CDS 2648863:2650764 + A595 B183 C44 10.88 -2.15 Prolyl oligopeptidase family protein precursor 3785 968
THC0290_N_1501 intra 2650765:2650967 + A595 B183 C44 9.80 -2.41 new transcription segment 3786 969
THC0290_2295 pepC CDS 2650968:2652155 + A545 B180 C44 12.34 -1.16 Bleomycin hydrolase 3787 778
THC0290_2296 CDS 2652224:2654422 - A730 B209 C54 8.31 1.58 Probable TonB-dependent outer membrane receptor precursor 3788 1596
THC0290_N_1502 intra 2654423:2654506 - A1549 B523 C143 10.47 1.27 new transcription segment 3789 2795
THC0290_N_1504 intra 2655471:2655533 - A528 B180 C44 10.11 -1.77 new transcription segment 3793 716
THC0290_2298 CDS 2655534:2656004 - A528 B180 C44 10.59 -1.24 Probable transcriptional regulator, AsnC family 3794 715
THC0290_N_1505 intra 2656005:2656153 - A631 B183 C44 7.93 -1.87 new transcription segment 3795 1364
THC0290_2299 CDS 2656154:2657524 - A600 B183 C44 11.14 -1.71 Probable saccharopine dehydrogenase 3796 1108
THC0290_2303 accC CDS 2660406:2661752 - A600 B183 C44 13.41 -1.38 Biotin carboxylase 3802 1079
THC0290_N_1510 intra 2662321:2662408 - A542 B180 C44 10.43 -1.81 new transcription segment 3805 758
THC0290_N_1511 intra 2663411:2663527 - A600 B183 C44 11.55 -1.09 new transcription segment 3807 1058
THC0290_2310 CDS 2666206:2667102 - A371 B141 C39 12.92 -1.17 Protein of unknown function precursor 3814 473
THC0290_2322 CDS 2677561:2679165 + A609 B183 C44 12.18 -1.13 Probable S8 subtilisin family serine endopeptidase precursor 3833 1277
THC0290_2323 CDS 2679247:2681118 + A609 B183 C44 10.70 -2.35 Probable M1 family aminopeptidase precursor 3835 1278
THC0290_2324 CDS 2681125:2681865 + A526 B180 C44 9.87 -1.88 Hypothetical protein 3836 712
THC0290_N_1524 3prime 2681866:2681941 + A585 B183 C44 7.41 -1.81 new transcription segment 3839 911
THC0290_N_1525 3prime 2682333:2682395 + A1769 B546 C143 8.49 1.55 new transcription segment 3841 3788
THC0290_N_1528 3prime 2689772:2690654 - A1779 B546 C143 8.76 1.66 new transcription segment 3849 3814
THC0290_2335 CDS 2695555:2696766 + A1234 B419 C125 9.29 1.03 Major facilitator superfamily (MFS) permease 3859 2308
THC0290_N_1534 3prime 2697036:2697334 - A658 B185 C45 11.76 -1.09 new transcription segment 3861 1430
THC0290_N_1539 3prime-PT 2714843:2716394 - A1248 B419 C125 7.40 1.24 new transcription segment 3876 2362
THC0290_2353 CDS 2722574:2723428 + A1789 B549 C143 11.62 1.77 Probable transmembrane protein of unknown function 3889 3840
THC0290_N_1546 3prime 2723429:2723547 + A1789 B549 C143 9.95 2.43 new transcription segment 3890 3841
THC0290_2355 CDS 2725475:2727580 - A600 B183 C44 12.31 -1.31 Protein of unknown function precursor. Putative peptidyl-prolyl cis-trans isomerase precursor 3892 1101
THC0290_N_1548 intra 2727604:2727675 - A612 B183 C44 9.88 -1.07 new transcription segment 3893 1297
THC0290_2357 CDS 2727885:2728442 - A545 B180 C44 9.66 -1.41 Probable lipoprotein precursor. Putative lipopolysaccharide assembly protein LptC 3895 776
THC0290_N_1554 repeated_region 2734035:2734439 + A865 B262 C70 9.14 -1.12 new transcription segment 3907 1789
THC0290_N_1561 intra 2742402:2742777 - A627 B183 C44 9.36 -1.13 new transcription segment 3922 1348
THC0290_2372 CDS 2742778:2743410 - A627 B183 C44 9.53 -1.40 Hypothetical transmembrane protein 3923 1349
THC0290_N_1562 intra 2743411:2743569 - A998 B317 C86 8.88 -1.69 new transcription segment 3924 1953
THC0290_2373 CDS 2743570:2744604 - A627 B183 C44 10.55 -2.03 RelA/SpoT domain protein 3925 1350
THC0290_N_1563 intra 2744605:2744699 - A605 B183 C44 11.26 -1.68 new transcription segment 3926 1225
THC0290_N_1568 5prime 2750790:2750873 - A1490 B510 C143 5.68 -2.95 new transcription segment 3937 2695
THC0290_N_1569 3prime 2751082:2751294 - A646 B183 C44 12.84 -1.36 new transcription segment 3938 1414
THC0290_2379 atpG CDS 2751295:2752155 - A646 B183 C44 13.04 -1.57 ATP synthase gamma subunit 3939 1415
THC0290_N_1570 intra 2752156:2752260 - A646 B183 C44 12.21 -1.48 new transcription segment 3940 1413
THC0290_2385 CDS 2756669:2758039 + A1795 B549 C143 11.37 5.38 RCC1 (Regulator of Chromosome Condensation) repeat domain protein precursor 3947 3862
THC0290_N_1572 3prime 2758040:2758319 + A1795 B549 C143 10.28 5.70 new transcription segment 3949 3863
THC0290_N_1573 Rfp87 indep 2762770:2763055 - A1768 B546 C143 9.51 2.27 new transcription segment 3954 3595
THC0290_N_1575 3prime 2763057:2763166 - A149 B59 C19 7.14 1.67 new transcription segment 3956 188
THC0290_N_1578 3prime 2766523:2766791 - A1679 B543 C143 7.33 2.32 new transcription segment 3962 3082
THC0290_2397 CDS 2769734:2770507 - A580 B183 C44 9.74 -1.86 Glycosyl transferase, group 2 family protein 3967 880
THC0290_2398 wcaJ CDS 2770509:2771867 - A580 B183 C44 9.51 -1.77 Putative colanic biosynthesis UDP-glucose lipid carrier transferase 3968 878
THC0290_2399 CDS 2771874:2772857 - A601 B183 C44 11.33 -1.05 Probable nucleoside-diphosphate-sugar epimerase 3969 1144
THC0290_2400 rmlD CDS 2772860:2773714 - A581 B183 C44 11.33 -1.22 dTDP-4-dehydrorhamnose reductase 3970 899
THC0290_2403 CDS 2775995:2776870 - A581 B183 C44 8.77 -1.62 Protein of unknown function 3973 900