Differential expression: Freshwater with fish [FishWater.vs.Ctrl]
Differentially expressed genes in cells maintained during 24h in aquarium containing 10L of dechlorinated water and 10 juvenile rainbow trout (5 g) maintained at 10°C under vigorous aeration, relative to standard laboratory condition (TYES 18°C 200 rpm OD600nm=1).
List of differentially expressed genomic elements (CDS and newly identified RNA elements).Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.
Reference samples: LAB_a, LAB_c
Test samples: FishWater_a, FishWater_c
Locus Tag | Name (v2) | Feature type | Location | Clusters | Base Expr. | Delta Expr. | Annotation | Chromosome order | Clusters order |
---|---|---|---|---|---|---|---|---|---|
THC0290_tRNA_0001 | tRNA | 4244:4317 - | A1769 B546 C143 | 10.51 | 3.05 | transfer RNA-Cys | 6 | 3789 | |
THC0290_N_0008 | 3prime-PT | 8228:8499 + | A1768 B546 C143 | 7.78 | 2.09 | new transcription segment | 15 | 3687 | |
THC0290_0009 | CDS | 8244:9227 - | A1710 B546 C143 | 12.63 | 1.51 | Band 7 family protein | 16 | 3142 | |
THC0290_N_0009 | intra | 9251:9388 - | A802 B244 C67 | 6.33 | -1.38 | new transcription segment | 17 | 1697 | |
THC0290_N_0013 | 3prime | 18031:18294 + | A646 B183 C44 | 9.33 | -1.15 | new transcription segment | 26 | 1409 | |
THC0290_0015 | CDS | 18295:18858 + | A600 B183 C44 | 11.81 | -1.61 | Probable outer membrane lipoprotein precursor, OmpH family | 27 | 1054 | |
THC0290_N_0018 | 5prime | 24970:25238 + | A1723 B546 C143 | 6.66 | 1.20 | new transcription segment | 37 | 3181 | |
THC0290_N_0023 | 3prime | 32460:32570 + | A1747 B546 C143 | 6.70 | 1.30 | new transcription segment | 46 | 3264 | |
THC0290_0029 | elaA | CDS | 47729:48178 + | A1768 B546 C143 | 10.32 | 1.54 | ElaA protein | 55 | 3677 |
THC0290_N_0028 | 3prime | 48179:48337 + | A1817 B557 C145 | 8.37 | 1.63 | new transcription segment | 57 | 3908 | |
THC0290_N_0029 | Rfp3 | indep | 49141:49425 + | A1768 B546 C143 | 9.16 | 1.30 | new transcription segment | 58 | 3650 |
THC0290_N_0031 | 5prime | 51080:51148 + | A1543 B522 C143 | 6.45 | -1.69 | new transcription segment | 61 | 2786 | |
THC0290_0033 | gldH | CDS | 52515:53027 + | A595 B183 C44 | 11.43 | -1.24 | Gliding motility lipoprotein precursor GldH | 63 | 967 |
THC0290_0035 | atoD | CDS | 55526:56224 + | A605 B183 C44 | 11.84 | -1.04 | 3-oxoacid CoA-transferase subunit A family protein AtoD | 67 | 1236 |
THC0290_0036 | CDS | 56236:59862 + | A618 B183 C44 | 11.65 | -1.31 | Probable type I endonuclease-methyltransferase fusion protein | 68 | 1323 | |
THC0290_0037 | atoA | CDS | 59864:60520 + | A618 B183 C44 | 10.79 | -1.03 | 3-oxoacid CoA-transferase subunit B family protein AtoA | 69 | 1322 |
THC0290_N_0033 | 3prime | 60521:60568 + | A691 B195 C50 | 6.69 | 2.50 | new transcription segment | 70 | 1497 | |
THC0290_N_0037 | Rfp4 | indep | 64013:64179 - | A699 B199 C52 | 12.42 | -3.85 | new transcription segment | 77 | 1517 |
THC0290_0041 | CDS | 64242:64637 - | A700 B199 C52 | 11.12 | -4.64 | Cytochrome c551/c552 family protein | 78 | 1523 | |
THC0290_N_0038 | intra | 64654:64878 - | A601 B183 C44 | 9.38 | -1.37 | new transcription segment | 79 | 1126 | |
THC0290_0052 | CDS | 74181:75047 + | A1712 B546 C143 | 10.27 | 1.21 | Probable transcriptional regulator, AraC family | 94 | 3150 | |
THC0290_0053 | hemH | CDS | 75051:76070 + | A1096 B368 C108 | 11.16 | 1.64 | Ferrochelatase | 95 | 2117 |
THC0290_0054 | (hemJ) | CDS | 76103:76645 + | A1097 B368 C108 | 10.98 | 1.44 | Protoporphyrinogen IX oxidase | 96 | 2118 |
THC0290_N_0048 | intra | 81912:82047 - | A629 B183 C44 | 9.08 | -1.10 | new transcription segment | 108 | 1357 | |
THC0290_0068 | CDS | 89048:90010 - | A446 B166 C44 | 12.84 | -1.07 | Flagellar motor/Chemotaxis (MotB)-related lipoprotein precursor | 120 | 575 | |
THC0290_0073 | mgtE | CDS | 95153:96502 - | A598 B183 C44 | 11.28 | -1.70 | Mg2+ transporter MgtE | 129 | 992 |
THC0290_0074 | ksgA | CDS | 96492:97271 - | A598 B183 C44 | 10.94 | -2.18 | Dimethyladenosine transferase | 130 | 993 |
THC0290_N_0058 | intra | 97272:97344 - | A598 B183 C44 | 10.38 | -1.88 | new transcription segment | 131 | 998 | |
THC0290_0075 | CDS | 97345:97656 - | A486 B172 C44 | 10.67 | -2.34 | Protein of unknown function | 132 | 648 | |
THC0290_N_0059 | intra | 97657:97728 - | A352 B131 C36 | 6.42 | -1.56 | new transcription segment | 133 | 452 | |
THC0290_0076 | CDS | 97729:99507 - | A485 B172 C44 | 9.46 | -1.88 | Tetratricopeptide repeat domain protein precursor | 134 | 647 | |
THC0290_N_0060 | intra | 99508:99741 - | A486 B172 C44 | 11.29 | -2.35 | new transcription segment | 135 | 649 | |
THC0290_0077 | serS | CDS | 99742:101013 - | A484 B172 C44 | 12.60 | -2.11 | Serine--tRNA ligase | 136 | 645 |
THC0290_N_0061 | intra | 101014:101224 - | A484 B172 C44 | 12.02 | -2.47 | new transcription segment | 137 | 646 | |
THC0290_0078 | CDS | 101225:102457 - | A484 B172 C44 | 11.86 | -4.09 | Protein of unknown function precursor | 138 | 643 | |
THC0290_0079 | CDS | 102454:102894 - | A484 B172 C44 | 12.41 | -3.91 | Protein of unknown function | 139 | 644 | |
THC0290_0080 | CDS | 102896:104074 - | A484 B172 C44 | 12.47 | -3.70 | Probable lipoprotein precursor | 140 | 642 | |
THC0290_tRNA_0002 | tRNA | 109057:109130 - | A1769 B546 C143 | 11.74 | 1.83 | transfer RNA-Asn | 149 | 3770 | |
THC0290_0087 | CDS | 112762:113097 - | A1654 B542 C143 | 8.82 | 1.12 | Probable single-stranded DNA-binding protein | 154 | 3023 | |
THC0290_0090 | pepO | CDS | 115174:117234 - | A600 B183 C44 | 11.95 | -1.58 | M13 family metallopeptidase PepO precursor | 160 | 1070 |
THC0290_0092 | CDS | 120728:121453 + | A1511 B519 C143 | 9.22 | 1.11 | Probable cytochrome c oxidase biogenesis protein | 162 | 2731 | |
THC0290_0094 | feoB | CDS | 121791:123884 + | A1084 B365 C107 | 9.34 | -1.61 | Ferrous iron transport protein B | 164 | 2074 |
THC0290_N_0071 | intra | 123885:124433 + | A1084 B365 C107 | 9.49 | -1.38 | new transcription segment | 165 | 2075 | |
THC0290_0096 | CDS | 125431:125595 - | A1768 B546 C143 | 5.63 | 1.01 | Hypothetical protein | 167 | 3577 | |
THC0290_N_0074 | 3prime | 129899:129947 + | A1188 B407 C123 | 5.95 | 1.59 | new transcription segment | 174 | 2228 | |
THC0290_0102 | CDS | 131570:132853 + | A204 B75 C24 | 13.20 | -1.25 | Protein of unknown function | 178 | 252 | |
THC0290_0103 | CDS | 133119:133640 + | A204 B75 C24 | 12.94 | -1.97 | Protein of unknown function precursor | 180 | 254 | |
THC0290_0104 | CDS | 133660:134139 + | A204 B75 C24 | 13.12 | -1.76 | Probable lipoprotein precursor | 181 | 255 | |
THC0290_0105 | CDS | 134151:135113 + | A204 B75 C24 | 12.60 | -1.81 | Protein of unknown function precursor | 182 | 253 | |
THC0290_0106 | CDS | 135128:136084 + | A204 B75 C24 | 13.06 | -2.04 | Protein of unknown function precursor | 183 | 251 | |
THC0290_N_0078 | 3prime | 136085:136144 + | A1747 B546 C143 | 8.32 | 2.26 | new transcription segment | 184 | 3290 | |
THC0290_N_0079 | 3prime | 136118:136225 - | A1763 B546 C143 | 11.38 | 3.05 | new transcription segment | 185 | 3432 | |
THC0290_0107 | CDS | 136226:138043 - | A1763 B546 C143 | 10.59 | 3.41 | Putative outer membrane protein precursor | 186 | 3431 | |
THC0290_0116 | panC | CDS | 145223:146071 - | A605 B183 C44 | 10.39 | -1.17 | Pantoate--beta-alanine ligase | 195 | 1248 |
THC0290_0120 | CDS | 150779:153613 + | A1785 B548 C143 | 12.84 | 1.58 | Probable TonB-dependent outer membrane receptor precursor | 199 | 3835 | |
THC0290_N_0082 | intra | 153614:153714 + | A1785 B548 C143 | 11.65 | 1.93 | new transcription segment | 200 | 3834 | |
THC0290_0121 | CDS | 153715:155214 + | A1785 B548 C143 | 12.64 | 1.50 | Probable lipoprotein precursor | 201 | 3836 | |
THC0290_0123 | atpC | CDS | 157010:157291 + | A600 B183 C44 | 13.41 | -1.36 | ATP synthase epsilon subunit | 206 | 1097 |
THC0290_0129 | CDS | 159979:160953 + | A1248 B419 C125 | 12.92 | 2.08 | Putative outer membrane protein precursor | 215 | 2360 | |
THC0290_0130 | CDS | 161008:162009 + | A1715 B546 C143 | 9.34 | 1.33 | Probable acyl-protein synthetase | 217 | 3160 | |
THC0290_N_0091 | 3prime | 162010:162767 + | A1820 B557 C145 | 7.59 | 1.40 | new transcription segment | 218 | 3912 | |
THC0290_0131 | CDS | 162019:162429 - | A598 B183 C44 | 9.27 | -1.02 | Protein of unknown function | 219 | 989 | |
THC0290_0135 | batE | CDS | 164792:165535 - | A676 B189 C46 | 8.80 | -1.10 | BatE protein | 228 | 1457 |
THC0290_N_0096 | 3prime | 164809:165563 + | A191 B70 C21 | 7.49 | 1.22 | new transcription segment | 229 | 237 | |
THC0290_N_0097 | repeated_region | 165536:166702 - | A677 B189 C46 | 13.44 | -1.96 | new transcription segment | 230 | 1468 | |
THC0290_0136 | batD | CDS | 166703:168505 - | A677 B189 C46 | 10.01 | -1.76 | BatD protein | 231 | 1467 |
THC0290_0137 | batC | CDS | 168527:169240 - | A677 B189 C46 | 10.14 | -1.13 | BatC protein | 232 | 1463 |
THC0290_N_0098 | repeated_region | 169241:170135 - | A677 B189 C46 | 15.00 | -1.43 | new transcription segment | 233 | 1465 | |
THC0290_0138 | batB | CDS | 170136:171176 - | A677 B189 C46 | 10.48 | -1.52 | BatB protein | 234 | 1461 |
THC0290_N_0099 | intra | 171177:171320 - | A677 B189 C46 | 10.44 | -1.29 | new transcription segment | 235 | 1464 | |
THC0290_0139 | CDS | 171321:171701 - | A677 B189 C46 | 10.11 | -1.72 | Protein of unknown function | 236 | 1462 | |
THC0290_N_0100 | intra | 171702:171755 - | A677 B189 C46 | 12.46 | -1.88 | new transcription segment | 237 | 1466 | |
THC0290_0140 | batA | CDS | 171756:172757 - | A677 B189 C46 | 10.48 | -1.25 | BatA protein | 238 | 1460 |
THC0290_0141 | CDS | 172759:174345 - | A677 B189 C46 | 9.99 | -1.90 | Probable transmembrane protein of unknown function | 239 | 1459 | |
THC0290_N_0101 | repeated_region | 174346:176105 - | A672 B188 C46 | 15.54 | -1.43 | new transcription segment | 240 | 1448 | |
THC0290_0142 | CDS | 176106:176972 - | A545 B180 C44 | 11.24 | -2.23 | Protein of unknown function | 241 | 770 | |
THC0290_N_0102 | intra | 176973:177041 - | A545 B180 C44 | 12.09 | -1.42 | new transcription segment | 242 | 771 | |
THC0290_0143 | CDS | 177042:178046 - | A853 B257 C70 | 11.81 | -1.11 | ATPase, MoxR family | 243 | 1774 | |
THC0290_0146 | CDS | 180146:180661 + | A600 B183 C44 | 11.90 | -1.56 | Probable outer membrane protein precursor, OmpA family | 247 | 1092 | |
THC0290_N_0104 | intra | 180662:180746 + | A1552 B523 C143 | 4.81 | -1.35 | new transcription segment | 248 | 2799 | |
THC0290_N_0105 | 3prime | 181329:181417 - | A1593 B534 C143 | 9.82 | 1.96 | new transcription segment | 250 | 2868 | |
THC0290_N_0106 | 3prime | 181329:181404 + | A1519 B521 C143 | 6.91 | 1.25 | new transcription segment | 251 | 2751 | |
THC0290_N_0107 | Rfp11 | indep | 182563:182671 + | A1768 B546 C143 | 5.46 | 3.06 | new transcription segment | 253 | 3598 |
THC0290_N_0109 | Rfp12 | indep | 184225:184363 + | A1768 B546 C143 | 7.91 | 1.62 | new transcription segment | 257 | 3665 |
THC0290_tRNA_0003 | tRNA | 191432:191514 + | A1769 B546 C143 | 13.99 | 1.92 | transfer RNA-Leu | 265 | 3761 | |
THC0290_tRNA_0004 | tRNA | 191804:191888 - | A1768 B546 C143 | 9.34 | 1.92 | transfer RNA-Leu | 267 | 3657 | |
THC0290_0157 | CDS | 194650:195750 + | A1765 B546 C143 | 9.19 | 2.27 | Probable transmembrane protein of unknown function | 272 | 3507 | |
THC0290_N_0123 | 3prime | 198042:198354 - | A616 B183 C44 | 8.71 | 1.13 | new transcription segment | 275 | 1303 | |
THC0290_N_0125 | 3prime | 201124:201191 - | A1850 B569 C149 | 9.20 | 1.75 | new transcription segment | 278 | 3948 | |
THC0290_N_0126 | intra | 202620:202692 - | A611 B183 C44 | 9.61 | -1.17 | new transcription segment | 280 | 1291 | |
THC0290_0166 | CDS | 210086:211081 + | A1768 B546 C143 | 8.96 | 1.21 | Protein of unknown function | 291 | 3717 | |
THC0290_N_0133 | 3prime | 211082:211240 + | A1768 B546 C143 | 7.82 | 1.53 | new transcription segment | 294 | 3681 | |
THC0290_0170 | CDS | 213837:215033 - | A1083 B365 C107 | 14.61 | -1.92 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 297 | 2068 | |
THC0290_0171 | CDS | 215347:216612 - | A1083 B365 C107 | 13.57 | -1.78 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 299 | 2066 | |
THC0290_0172 | CDS | 216630:217619 - | A1083 B365 C107 | 13.21 | -1.99 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 300 | 2071 | |
THC0290_0173 | CDS | 217635:218969 - | A1083 B365 C107 | 13.91 | -2.00 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 301 | 2069 | |
THC0290_0174 | CDS | 219283:220551 - | A1083 B365 C107 | 13.20 | -2.40 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 302 | 2072 | |
THC0290_0175 | CDS | 220567:221559 - | A1083 B365 C107 | 13.43 | -2.70 | Probable cell surface protein (Leucine-rich repeat protein) | 303 | 2073 | |
THC0290_0176 | CDS | 221575:222702 - | A1083 B365 C107 | 13.43 | -2.45 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 304 | 2070 | |
THC0290_N_0139 | intra | 222703:223027 - | A1083 B365 C107 | 11.92 | -3.09 | new transcription segment | 305 | 2065 | |
THC0290_0177 | CDS | 223028:224638 - | A1083 B365 C107 | 14.47 | -1.50 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 306 | 2059 | |
THC0290_N_0140 | repeated_region | 224639:224914 - | A1083 B365 C107 | 9.54 | -2.58 | new transcription segment | 307 | 2061 | |
THC0290_0178 | CDS | 224965:225888 - | A1083 B365 C107 | 13.33 | -2.88 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 308 | 2067 | |
THC0290_0179 | CDS | 225904:227169 - | A1083 B365 C107 | 15.00 | -1.93 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 309 | 2063 | |
THC0290_0180 | CDS | 227183:228379 - | A1083 B365 C107 | 15.15 | -2.15 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 310 | 2064 | |
THC0290_0181 | CDS | 228393:229796 - | A1083 B365 C107 | 12.28 | -2.14 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 311 | 2060 | |
THC0290_N_0142 | repeated_region | 229797:230072 - | A1083 B365 C107 | 9.37 | -2.74 | new transcription segment | 312 | 2062 | |
THC0290_0182 | CDS | 230123:231112 - | A1083 B365 C107 | 10.86 | -3.63 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 313 | 2056 | |
THC0290_0183 | CDS | 231127:232047 - | A1083 B365 C107 | 12.53 | -3.17 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 314 | 2057 | |
THC0290_0184 | CDS | 232062:233117 - | A1083 B365 C107 | 10.91 | -2.48 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 315 | 2058 | |
THC0290_0185 | CDS | 233132:234121 - | A1088 B365 C107 | 10.04 | -4.23 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 316 | 2088 | |
THC0290_0186 | CDS | 234136:235122 - | A1088 B365 C107 | 10.25 | -3.80 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 317 | 2085 | |
THC0290_N_0145 | 3prime | 237710:238051 - | A489 B173 C44 | 5.76 | -2.97 | new transcription segment | 322 | 652 | |
THC0290_0190 | CDS | 238052:238456 - | A480 B171 C44 | 9.38 | -1.49 | Probable protein chain release factor | 324 | 633 | |
THC0290_0191 | CDS | 238456:240570 - | A581 B183 C44 | 9.67 | -2.01 | Probable bifunctional protein : transcriptional regulator NadR family and of unknown function | 325 | 890 | |
THC0290_N_0147 | 3prime | 244080:244141 + | A1670 B542 C143 | 8.41 | 1.80 | new transcription segment | 331 | 3059 | |
THC0290_0199 | CDS | 249721:250146 + | A1768 B546 C143 | 12.05 | 1.00 | Probable transmembrane protein of unknown function | 339 | 3672 | |
THC0290_0200 | CDS | 250231:250752 + | A1715 B546 C143 | 11.76 | 1.30 | Hypothetical protein | 340 | 3158 | |
THC0290_0201 | CDS | 250719:251186 - | A1765 B546 C143 | 9.75 | 2.22 | Adenylate cyclase family protein | 341 | 3466 | |
THC0290_N_0155 | 5prime | 251187:251301 - | A1768 B546 C143 | 9.67 | 1.50 | new transcription segment | 343 | 3653 | |
THC0290_N_0159 | intra | 254489:254544 - | A601 B183 C44 | 7.83 | -1.28 | new transcription segment | 349 | 1119 | |
THC0290_N_0161 | 5prime | 255694:255745 + | A103 B45 C16 | 13.44 | -1.08 | new transcription segment | 353 | 128 | |
THC0290_0208 | rnc | CDS | 257618:258358 + | A600 B183 C44 | 9.78 | -1.18 | Ribonuclease III | 357 | 1113 |
THC0290_N_0164 | intra | 258359:258452 + | A601 B183 C44 | 9.17 | -1.05 | new transcription segment | 358 | 1120 | |
THC0290_0219 | CDS | 266940:267446 + | A1747 B546 C143 | 8.10 | 1.21 | Hypothetical protein | 374 | 3297 | |
THC0290_N_0170 | 3prime | 267422:267648 - | A1790 B549 C143 | 10.67 | 1.57 | new transcription segment | 375 | 3843 | |
THC0290_0220 | CDS | 267649:268050 - | A1790 B549 C143 | 10.92 | 1.89 | Hypothetical protein | 376 | 3842 | |
THC0290_N_0171 | intra | 268051:268199 - | A1790 B549 C143 | 12.52 | 2.08 | new transcription segment | 377 | 3845 | |
THC0290_0221 | CDS | 268200:268898 - | A1790 B549 C143 | 12.90 | 2.20 | Protein of unknown function precursor | 378 | 3844 | |
THC0290_0222 | CDS | 268913:269659 - | A1762 B546 C143 | 11.96 | 2.34 | Protein of unknown function precursor | 379 | 3403 | |
THC0290_0232 | hppD | CDS | 283454:284614 + | A222 B82 C25 | 12.19 | -1.13 | 4-hydroxyphenylpyruvate dioxygenase | 396 | 283 |
THC0290_N_0178 | intra | 284615:284739 + | A1125 B375 C109 | 12.86 | -1.18 | new transcription segment | 397 | 2156 | |
THC0290_0237 | fpp1 | CDS | 288547:291963 - | A1062 B352 C104 | 11.66 | 2.66 | Psychrophilic metalloprotease Fpp1 precursor | 403 | 2030 |
THC0290_0241 | CDS | 297417:297623 - | A1450 B502 C142 | 13.35 | 1.72 | Biotin synthase | 409 | 2641 | |
THC0290_N_0184 | Rfp19 | indep | 297507:297566 + | A1408 B485 C140 | 15.32 | 1.78 | new transcription segment | 410 | 2582 |
THC0290_0246 | aroA | CDS | 301503:302732 - | A601 B183 C44 | 8.65 | -1.37 | 3-phosphoshikimate 1-carboxyvinyltransferase | 420 | 1121 |
THC0290_0248 | CDS | 303303:303749 - | A358 B136 C39 | 8.66 | -1.29 | Protein of unknown function | 423 | 459 | |
THC0290_0249 | CDS | 303781:304143 - | A359 B136 C39 | 10.99 | -1.18 | Hypothetical protein Putative pseudogene | 424 | 460 | |
THC0290_N_0192 | intra | 309322:309431 - | A721 B205 C53 | 10.55 | 1.10 | new transcription segment | 431 | 1573 | |
THC0290_0254 | rsgA | CDS | 309432:310412 - | A721 B205 C53 | 10.40 | 1.09 | Putative ribosome biogenesis GTPase RsgA | 432 | 1575 |
THC0290_0255 | CDS | 310522:311604 - | A721 B205 C53 | 9.96 | 1.30 | Putative phospho-2-dehydro-3-deoxyheptonate aldolase | 434 | 1574 | |
THC0290_N_0197 | 3prime | 316995:317307 + | A1747 B546 C143 | 9.74 | 1.10 | new transcription segment | 443 | 3293 | |
THC0290_0262 | metX | CDS | 318651:319652 - | A726 B207 C54 | 5.47 | 1.23 | Homoserine O-acetyltransferase | 446 | 1584 |
THC0290_0263 | metY | CDS | 319731:321023 - | A726 B207 C54 | 6.99 | 2.14 | Probable O-acetylhomoserine aminocarboxypropyltransferase | 447 | 1585 |
THC0290_N_0200 | 3prime | 323909:323965 - | A141 B55 C18 | 6.36 | -1.44 | new transcription segment | 452 | 180 | |
THC0290_0267 | CDS | 324293:325300 + | A1486 B509 C142 | 4.85 | -1.22 | Hypothetical protein precursor | 455 | 2691 | |
THC0290_0277 | CDS | 334578:335498 - | A605 B183 C44 | 14.22 | -1.75 | Protein of unknown function precursor, putative outer membrane protein | 470 | 1238 | |
THC0290_0280 | gene | 337415:337477 + | A1144 B387 C115 | 5.28 | -1.71 | Truncated protein N-terminal region | 474 | 2177 | |
THC0290_0281 | gene | 337517:337570 + | A1747 B546 C143 | 8.83 | 1.15 | Truncated protein C-terminal region | 475 | 3274 | |
THC0290_0282 | CDS | 337611:338546 + | A991 B313 C85 | 6.61 | -1.27 | Probable outer membrane protein precursor | 476 | 1946 | |
THC0290_0283 | gene | 338551:338808 + | A595 B183 C44 | 8.03 | -1.10 | Fragment of hypothetical protein (part 1) | 477 | 965 | |
THC0290_0286 | CDS | 340851:343562 + | A312 B118 C33 | 4.68 | -1.32 | Protein of unknown function precursor | 481 | 397 | |
THC0290_0287 | metK | CDS | 343737:344987 - | A854 B257 C70 | 11.46 | -1.79 | Methionine adenosyltransferase | 484 | 1776 |
THC0290_N_0210 | 5prime | 344988:345117 - | A855 B257 C70 | 10.92 | -1.94 | new transcription segment | 485 | 1778 | |
THC0290_miscRNA_0001 | misc_RNA | 345053:345113 - | A855 B257 C70 | 10.79 | -2.02 | SAM-II long loop | 486 | 1777 | |
THC0290_N_0211 | intra | 346306:346363 - | A1344 B465 C135 | 11.84 | 1.09 | new transcription segment | 488 | 2495 | |
THC0290_0290 | gdhA | CDS | 348775:350118 - | A595 B183 C44 | 14.13 | -1.22 | Glutamate dehydrogenase (NADP+) | 490 | 974 |
THC0290_N_0216 | 3prime | 355371:355427 + | A1608 B535 C143 | 9.68 | 1.87 | new transcription segment | 497 | 2896 | |
THC0290_N_0217 | 3prime | 355417:355516 - | A1643 B540 C143 | 9.26 | 1.13 | new transcription segment | 498 | 2985 | |
THC0290_0297 | CDS | 356020:356607 + | A1243 B419 C125 | 9.36 | 1.12 | Protein of unknown function | 500 | 2328 | |
THC0290_0298 | dxs | CDS | 356654:358429 + | A1252 B419 C125 | 9.21 | 1.02 | 1-deoxy-D-xylulose-5-phosphate synthase | 501 | 2370 |
THC0290_0299 | CDS | 358481:361225 - | A605 B183 C44 | 13.91 | -1.43 | Probable M36 fungalysin family metalloprotease precursor | 502 | 1224 | |
THC0290_0304 | CDS | 370460:371698 + | A1348 B467 C136 | 9.07 | 1.38 | Probable transmembrane protein of unknown function | 510 | 2500 | |
THC0290_N_0222 | 3prime | 372045:372409 + | A1455 B504 C142 | 10.53 | 1.03 | new transcription segment | 512 | 2648 | |
THC0290_0310 | CDS | 376525:379755 - | A939 B296 C82 | 11.10 | -1.01 | Probable transmembrane protein of unknown function | 518 | 1876 | |
THC0290_0317 | CDS | 388288:389880 + | A250 B89 C27 | 9.99 | 1.79 | Probable glycoside hydrolase, family 13 | 530 | 326 | |
THC0290_0322 | CDS | 393684:394175 - | A1464 B506 C142 | 10.26 | -1.03 | Probable transmembrane protein of unknown function | 539 | 2658 | |
THC0290_0324 | CDS | 395386:395604 + | A1767 B546 C143 | 11.64 | 1.18 | Hypothetical protein | 541 | 3574 | |
THC0290_N_0243 | 5prime | 400566:400739 + | A1763 B546 C143 | 10.35 | 4.28 | new transcription segment | 554 | 3445 | |
THC0290_0333 | CDS | 408753:409667 + | A1102 B370 C109 | 13.60 | 1.62 | Protein of unknown function precursor | 556 | 2125 | |
THC0290_0334 | CDS | 409678:411612 + | A1102 B370 C109 | 13.64 | 1.08 | Probable outer membrane protein precursor, OmpA family | 557 | 2123 | |
THC0290_N_0248 | Rfp25 | indep | 418605:418919 + | A1760 B546 C143 | 13.17 | 4.29 | new transcription segment | 566 | 3379 |
THC0290_N_0252 | 3prime | 424075:424125 - | A689 B194 C49 | 8.56 | 3.29 | new transcription segment | 576 | 1495 | |
THC0290_0346 | etfA | CDS | 424126:425094 - | A697 B197 C51 | 13.64 | 1.51 | Electron transfer flavoprotein, alpha subunit | 577 | 1510 |
THC0290_N_0253 | intra | 425095:425243 - | A697 B197 C51 | 12.33 | 1.67 | new transcription segment | 578 | 1511 | |
THC0290_0347 | etfB | CDS | 425244:425990 - | A697 B197 C51 | 13.18 | 1.66 | Electron transfer flavoprotein, beta subunit | 579 | 1509 |
THC0290_N_0263 | 3prime-PT | 441466:441936 - | A1760 B546 C143 | 9.38 | 2.65 | new transcription segment | 598 | 3375 | |
THC0290_N_0269 | 3prime-PT | 448689:448837 - | A1795 B549 C143 | 9.46 | 5.44 | new transcription segment | 612 | 3859 | |
THC0290_N_0271 | 3prime | 448838:448909 - | A1795 B549 C143 | 10.48 | 6.23 | new transcription segment | 614 | 3861 | |
THC0290_0367 | CDS | 448910:449260 - | A1795 B549 C143 | 12.62 | 5.01 | Protein of unknown function precursor | 616 | 3860 | |
THC0290_0368 | CDS | 449469:450680 - | A1670 B542 C143 | 8.12 | 1.51 | Probable lipoprotein precursor | 617 | 3060 | |
THC0290_0369 | CDS | 450870:453704 - | A1670 B542 C143 | 7.90 | 2.64 | Probable TonB-dependent outer membrane receptor precursor | 618 | 3061 | |
THC0290_0372 | oprP | CDS | 455757:457094 + | A1492 B512 C143 | 10.67 | 2.05 | Probable phosphate-selective porin precursor | 621 | 2706 |
THC0290_0373 | pstS | CDS | 457114:457947 + | A1492 B512 C143 | 11.94 | 2.51 | ABC-type phosphate-transport system, binding protein precursor component PstS | 622 | 2707 |
THC0290_N_0274 | intra | 457948:458037 + | A1492 B512 C143 | 8.45 | 3.04 | new transcription segment | 623 | 2705 | |
THC0290_0374 | pstC | CDS | 458038:459189 + | A1492 B512 C143 | 11.02 | 2.72 | ABC-type phosphate-transport system, permease component PstC | 624 | 2701 |
THC0290_0375 | pstA | CDS | 459193:460137 + | A1492 B512 C143 | 10.24 | 2.76 | ABC-type phosphate-transport system, permease component PstA | 625 | 2702 |
THC0290_0376 | pstB | CDS | 460164:460922 + | A1492 B512 C143 | 10.63 | 1.97 | ABC-type phosphate-transport system, ATPase component PstB | 626 | 2703 |
THC0290_0377 | phoU | CDS | 460961:461689 + | A1492 B512 C143 | 10.56 | 1.42 | Phosphate transport system protein PhoU | 627 | 2704 |
THC0290_0378 | CDS | 461753:462799 - | A1401 B481 C139 | 7.25 | 1.18 | Probable glycosyl transferase | 628 | 2575 | |
THC0290_0379 | CDS | 462838:463659 - | A1670 B542 C143 | 7.40 | 1.42 | Protein of unknown function | 629 | 3062 | |
THC0290_N_0276 | 3prime | 465495:465656 - | A162 B61 C19 | 7.39 | 1.47 | new transcription segment | 634 | 202 | |
THC0290_0383 | CDS | 465657:466046 - | A1766 B546 C143 | 8.78 | 1.66 | Protein of unknown function precursor | 636 | 3565 | |
THC0290_0392 | CDS | 477872:478558 + | A1711 B546 C143 | 10.09 | 1.45 | Protein of unknown function precursor | 649 | 3148 | |
THC0290_N_0282 | 3prime | 478559:479025 + | A1711 B546 C143 | 9.52 | 1.66 | new transcription segment | 651 | 3146 | |
THC0290_0395 | CDS | 481952:482293 - | A1413 B488 C140 | 6.18 | 4.32 | Hypothetical protein | 655 | 2588 | |
THC0290_tRNA_0008 | tRNA | 483382:483469 - | A1769 B546 C143 | 11.23 | 1.73 | transfer RNA-Leu | 658 | 3763 | |
THC0290_0397 | mutS | CDS | 483724:486324 - | A595 B183 C44 | 10.13 | -1.10 | DNA mismatch repair protein MutS | 660 | 953 |
THC0290_0399 | CDS | 487057:487605 + | A1753 B546 C143 | 9.22 | 1.20 | Probable tRNA/rRNA methyltransferase | 663 | 3351 | |
THC0290_N_0292 | 3prime | 493173:493641 - | A196 B70 C21 | 7.28 | 1.18 | new transcription segment | 669 | 243 | |
THC0290_0403 | CDS | 493642:494436 - | A1768 B546 C143 | 10.29 | 1.11 | Protein of unknown function | 671 | 3673 | |
THC0290_N_0294 | 5prime | 494437:494488 - | A1552 B523 C143 | 8.21 | 1.08 | new transcription segment | 672 | 2805 | |
THC0290_0405 | CDS | 495160:496668 + | A558 B183 C44 | 9.79 | -1.06 | Protein of unknown function | 674 | 819 | |
THC0290_N_0296 | 5prime | 498014:498078 + | A334 B125 C35 | 11.55 | -1.43 | new transcription segment | 677 | 434 | |
THC0290_0407 | porR | CDS | 498079:499212 + | A595 B183 C44 | 12.39 | -1.11 | PorR protein, probably involved in biosynthesis of cell surface polysaccharide | 678 | 951 |
THC0290_0408 | galE | CDS | 499324:500355 + | A601 B183 C44 | 11.15 | -1.09 | UDP-glucose 4-epimerase | 681 | 1140 |
THC0290_N_0298 | 3prime-PT | 500352:500565 - | A1760 B546 C143 | 9.50 | 2.15 | new transcription segment | 682 | 3376 | |
THC0290_0410 | fabD | CDS | 501009:501881 - | A609 B183 C44 | 10.38 | -1.05 | Malonyl CoA-acyl carrier protein transacylase | 686 | 1282 |
THC0290_N_0303 | intra | 501925:502073 - | A587 B183 C44 | 7.51 | -1.03 | new transcription segment | 687 | 920 | |
THC0290_0415 | CDS | 505149:506246 - | A1417 B489 C140 | 11.70 | 1.04 | Fatty acid desaturase | 694 | 2599 | |
THC0290_0416 | gidB | CDS | 506352:506981 + | A1760 B546 C143 | 10.48 | 1.46 | Methyltransferase GidB | 695 | 3370 |
THC0290_N_0304 | 3prime | 506982:507043 + | A1552 B523 C143 | 6.19 | 1.73 | new transcription segment | 696 | 2806 | |
THC0290_0424 | CDS | 514770:516161 - | A1719 B546 C143 | 9.22 | 2.14 | Probable outer membrane efflux protein precursor | 707 | 3167 | |
THC0290_0425 | CDS | 516165:517523 - | A1719 B546 C143 | 10.06 | 2.81 | Probable ABC-type transport system, membrane fusion efflux protein component | 708 | 3168 | |
THC0290_0426 | CDS | 517529:519190 - | A1719 B546 C143 | 10.10 | 3.15 | Probable ABC-type transport system, ATPase and permease components | 709 | 3169 | |
THC0290_0427 | CDS | 519196:519870 - | A1719 B546 C143 | 9.52 | 3.04 | Probable transcriptional regulator, TetR family | 710 | 3166 | |
THC0290_0429 | CDS | 521589:522020 + | A1509 B519 C143 | 8.96 | 1.59 | Hypothetical transmembrane protein | 712 | 2728 | |
THC0290_N_0309 | 3prime | 522021:522213 + | A1509 B519 C143 | 10.23 | 1.62 | new transcription segment | 713 | 2729 | |
THC0290_N_0311 | intra | 524398:524889 + | A1765 B546 C143 | 8.93 | 1.07 | new transcription segment | 716 | 3534 | |
THC0290_miscRNA_0002 | misc_RNA | 524890:524985 + | A1765 B546 C143 | 10.76 | 1.49 | TPP riboswitch [THI element] | 717 | 3484 | |
THC0290_N_0312 | intra | 524986:525051 + | A729 B209 C54 | 10.73 | 1.01 | new transcription segment | 718 | 1595 | |
THC0290_N_0322 | 3prime | 539143:539314 - | A1872 B578 C149 | 9.08 | 1.44 | new transcription segment | 740 | 3974 | |
THC0290_N_0326 | 3prime | 553386:553649 - | A703 B199 C52 | 9.33 | -2.78 | new transcription segment | 755 | 1531 | |
THC0290_N_0328 | 3prime-PT | 553432:553812 + | A87 B41 C15 | 8.19 | 1.51 | new transcription segment | 756 | 103 | |
THC0290_0456 | CDS | 553650:554273 - | A702 B199 C52 | 10.84 | -4.31 | Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer | 757 | 1530 | |
THC0290_0457 | tsf | CDS | 554438:555262 - | A599 B183 C44 | 13.10 | -1.28 | Elongation factor Ts (EF-Ts) | 758 | 1008 |
THC0290_N_0331 | intra | 555263:555363 - | A599 B183 C44 | 12.27 | -1.22 | new transcription segment | 759 | 1009 | |
THC0290_N_0336 | 3prime | 564168:564864 + | A1252 B419 C125 | 8.06 | 1.26 | new transcription segment | 775 | 2374 | |
THC0290_N_0339 | 3prime-PT | 567081:567646 - | A1760 B546 C143 | 8.56 | 3.56 | new transcription segment | 782 | 3374 | |
THC0290_0475 | gene | 580335:580526 - | A1765 B546 C143 | 8.77 | 1.09 | Transposase (fragment) | 799 | 3490 | |
THC0290_N_0351 | repeated_region | 585398:586012 - | A1765 B546 C143 | 9.03 | 1.14 | new transcription segment | 808 | 3522 | |
THC0290_0482 | CDS | 586087:587670 + | A1765 B546 C143 | 8.81 | 1.66 | Transposase IS1182 family | 809 | 3526 | |
THC0290_N_0354 | 5prime | 589619:589720 - | A1747 B546 C143 | 8.69 | 1.63 | new transcription segment | 814 | 3300 | |
THC0290_0485 | CDS | 589753:591324 + | A1765 B546 C143 | 8.95 | 1.76 | Transposase IS1182 family | 815 | 3527 | |
THC0290_0487 | CDS | 592935:594287 + | A841 B255 C69 | 11.10 | -2.72 | Protein of unknown function | 817 | 1757 | |
THC0290_0488 | CDS | 594274:594957 + | A841 B255 C69 | 10.23 | -2.56 | Protein of unknown function | 818 | 1758 | |
THC0290_N_0355 | intra | 594958:595161 + | A866 B262 C70 | 9.03 | -1.70 | new transcription segment | 819 | 1790 | |
THC0290_0489 | CDS | 595162:596364 + | A331 B122 C33 | 10.94 | -1.00 | Transposase IS256 family | 820 | 422 | |
THC0290_0502 | CDS | 608390:609994 + | A1765 B546 C143 | 8.83 | 1.72 | Transposase IS1182 family | 839 | 3528 | |
THC0290_0504 | CDS | 611442:612659 + | A1765 B546 C143 | 8.68 | 1.25 | Probable transposase | 843 | 3543 | |
THC0290_0506 | CDS | 613962:614243 + | A1415 B488 C140 | 7.32 | 4.84 | Protein of unknown function | 847 | 2590 | |
THC0290_0507 | gene | 614341:614829 + | A1415 B488 C140 | 6.08 | 3.95 | Truncated protein of unknown function, N-terminal region | 848 | 2591 | |
THC0290_N_0367 | repeated_region | 614486:614829 - | A1768 B546 C143 | 6.36 | 3.63 | new transcription segment | 849 | 3600 | |
THC0290_N_0372 | repeated_region | 633986:634186 - | A1765 B546 C143 | 9.04 | 2.53 | new transcription segment | 863 | 3515 | |
THC0290_0517 | CDS | 634225:634386 - | A1765 B546 C143 | 9.32 | 2.95 | Hypothetical protein | 864 | 3514 | |
THC0290_N_0373 | intra | 634387:634452 - | A1765 B546 C143 | 12.38 | 3.51 | new transcription segment | 865 | 3513 | |
THC0290_0518 | CDS | 634453:634626 - | A1765 B546 C143 | 11.77 | 3.69 | Conserved protein of unknown function | 866 | 3512 | |
THC0290_N_0374 | intra | 634627:634806 - | A1765 B546 C143 | 10.62 | 4.11 | new transcription segment | 867 | 3511 | |
THC0290_0519 | CDS | 634807:635154 - | A1765 B546 C143 | 11.37 | 1.55 | Conserved protein of unknown function | 869 | 3504 | |
THC0290_0520 | CDS | 635151:635951 - | A1765 B546 C143 | 11.03 | 1.62 | Probable transcriptional regulator | 870 | 3505 | |
THC0290_0521 | CDS | 637705:637932 - | A1233 B419 C125 | 5.32 | 2.57 | Protein of unknown function | 871 | 2307 | |
THC0290_N_0377 | repeated_region | 641242:642097 - | A1252 B419 C125 | 9.89 | 1.40 | new transcription segment | 877 | 2368 | |
THC0290_0526 | CDS | 642217:643776 + | A1765 B546 C143 | 8.86 | 1.79 | Transposase IS1182 family | 878 | 3529 | |
THC0290_N_0378 | repeated_region | 645071:645304 + | A1686 B545 C143 | 8.33 | 1.25 | new transcription segment | 880 | 3092 | |
THC0290_0529 | CDS | 646131:646511 - | A669 B187 C46 | 8.68 | -1.27 | Hypothetical protein | 884 | 1443 | |
THC0290_N_0388 | repeated_region | 655785:656570 - | A1252 B419 C125 | 9.55 | 1.30 | new transcription segment | 901 | 2367 | |
THC0290_0540 | CDS | 656981:657529 - | A1760 B546 C143 | 12.54 | 1.16 | Hypothetical protein | 903 | 3377 | |
THC0290_N_0390 | Rfp30 | indep | 658610:658815 + | A1762 B546 C143 | 11.21 | 2.00 | new transcription segment | 906 | 3412 |
THC0290_0543 | CDS | 660017:661417 - | A1252 B419 C125 | 7.82 | 1.89 | Hypothetical protein | 910 | 2373 | |
THC0290_N_0393 | repeated_region | 661643:662054 - | A1766 B546 C143 | 12.44 | 1.44 | new transcription segment | 911 | 3563 | |
THC0290_N_0395 | repeated_region | 666241:666640 - | A1768 B546 C143 | 8.54 | 1.23 | new transcription segment | 917 | 3576 | |
THC0290_N_0396 | intra | 668261:668748 - | A1765 B546 C143 | 8.47 | 1.81 | new transcription segment | 921 | 3545 | |
THC0290_N_0397 | repeated_region | 669370:670142 - | A1765 B546 C143 | 8.71 | 1.16 | new transcription segment | 923 | 3523 | |
THC0290_0556 | CDS | 678342:679628 - | A1356 B468 C136 | 9.07 | 1.11 | Probable type II modification methyltransferase Sau3AI | 932 | 2515 | |
THC0290_N_0404 | repeated_region | 683377:684734 - | A1252 B419 C125 | 9.73 | 1.10 | new transcription segment | 941 | 2369 | |
THC0290_N_0410 | repeated_region | 693406:693624 - | A842 B255 C69 | 9.92 | -1.39 | new transcription segment | 954 | 1760 | |
THC0290_0569 | CDS | 693625:694329 - | A842 B255 C69 | 10.28 | -1.74 | Protein of unknown function | 955 | 1759 | |
THC0290_N_0411 | repeated_region | 695663:696066 - | A1765 B546 C143 | 12.30 | 1.16 | new transcription segment | 957 | 3456 | |
THC0290_N_0412 | repeated_region | 696397:696658 - | A1768 B546 C143 | 10.07 | 1.54 | new transcription segment | 959 | 3592 | |
THC0290_N_0415 | repeated_region | 698501:698961 - | A1765 B546 C143 | 11.81 | 1.47 | new transcription segment | 964 | 3454 | |
THC0290_0574 | CDS | 698962:700197 - | A1191 B409 C123 | 10.48 | 1.24 | Major facilitator superfamily (MFS) permease | 965 | 2231 | |
THC0290_0581 | CDS | 707782:708492 + | A1765 B546 C143 | 11.06 | 2.48 | Protein of unknown function | 979 | 3501 | |
THC0290_0582 | CDS | 708481:710181 - | A1103 B371 C109 | 10.48 | 1.55 | Protein of unknown function containing peptidoglycan binding domain | 981 | 2127 | |
THC0290_N_0424 | 3prime | 708493:708688 + | A1645 B540 C143 | 9.28 | 2.72 | new transcription segment | 982 | 2997 | |
THC0290_N_0425 | 3prime-PT | 708689:709190 + | A1645 B540 C143 | 7.99 | 1.80 | new transcription segment | 983 | 2998 | |
THC0290_0587 | CDS | 713131:715374 + | A1446 B502 C142 | 11.52 | 1.06 | Probable M1 family aminopeptidase precursor | 991 | 2632 | |
THC0290_0588 | CDS | 715514:716959 - | A552 B181 C44 | 8.85 | -1.06 | Probable amino acid-transporting permease | 993 | 796 | |
THC0290_N_0433 | intra | 729464:729774 + | A664 B187 C46 | 8.73 | -2.00 | new transcription segment | 1001 | 1438 | |
THC0290_0594 | CDS | 729775:729990 + | A599 B183 C44 | 9.27 | -1.68 | Conserved protein of unknown function | 1002 | 1021 | |
THC0290_N_0434 | 3prime | 729991:730208 + | A601 B183 C44 | 10.76 | -2.33 | new transcription segment | 1003 | 1129 | |
THC0290_N_0435 | intra | 730209:730951 + | A318 B119 C33 | 9.76 | -1.78 | new transcription segment | 1004 | 404 | |
THC0290_0596 | fjo27 | CDS | 731427:731732 + | A600 B183 C44 | 13.24 | -1.44 | Conserved membrane protein of unknown function | 1007 | 1046 |
THC0290_N_0438 | repeated_region | 734673:735247 + | A1842 B563 C145 | 7.77 | 1.01 | new transcription segment | 1011 | 3938 | |
THC0290_0600 | CDS | 736346:737788 - | A1412 B488 C140 | 11.31 | 1.08 | Probable outer membrane efflux protein precursor | 1013 | 2587 | |
THC0290_N_0441 | 3prime | 739332:739567 + | A1420 B491 C140 | 9.22 | 1.55 | new transcription segment | 1017 | 2602 | |
THC0290_0609 | cyoE | CDS | 743756:744658 - | A788 B239 C67 | 9.98 | 1.61 | Protoheme IX farnesyltransferase | 1026 | 1677 |
THC0290_N_0444 | 3prime | 745438:745510 - | A1762 B546 C143 | 15.29 | 1.51 | new transcription segment | 1028 | 3393 | |
THC0290_0611 | CDS | 745511:745864 - | A1762 B546 C143 | 13.91 | 1.85 | Protein of unknown function | 1029 | 3392 | |
THC0290_0615 | CDS | 750566:751084 + | A1407 B485 C140 | 11.42 | 2.12 | Carbonic anhydrase/acetyltransferase family protein | 1036 | 2581 | |
THC0290_N_0447 | 3prime | 751085:752281 + | A1248 B419 C125 | 8.89 | 1.91 | new transcription segment | 1037 | 2361 | |
THC0290_0617 | CDS | 752305:752805 - | A400 B152 C42 | 13.51 | -1.90 | Outer membrane protein precursor OmpH family P18 | 1041 | 514 | |
THC0290_N_0454 | 3prime-PT | 761018:761188 + | A148 B58 C19 | 6.34 | -1.66 | new transcription segment | 1054 | 187 | |
THC0290_N_0460 | Rfp32 | indep | 767146:767422 - | A1768 B546 C143 | 7.10 | 1.52 | new transcription segment | 1066 | 3682 |
THC0290_0634 | CDS | 768501:769142 - | A1768 B546 C143 | 9.56 | 1.12 | O-methyltransferase | 1072 | 3732 | |
THC0290_N_0465 | intra | 770297:771152 + | A1715 B546 C143 | 7.70 | 2.71 | new transcription segment | 1075 | 3159 | |
THC0290_0636 | CDS | 770321:771202 - | A1765 B546 C143 | 11.25 | 3.89 | Probable lipoprotein precursor | 1076 | 3493 | |
THC0290_0639 | CDS | 773016:773693 + | A1710 B546 C143 | 8.41 | 1.37 | Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor | 1079 | 3145 | |
THC0290_0642 | CDS | 776332:777606 + | A1767 B546 C143 | 8.03 | 2.21 | Protein of unknown function precursor | 1082 | 3568 | |
THC0290_N_0467 | 3prime | 779421:779788 - | A1768 B546 C143 | 9.20 | 4.02 | new transcription segment | 1085 | 3729 | |
THC0290_0644 | CDS | 779789:780418 - | A1768 B546 C143 | 11.68 | 4.71 | Two-component system response regulatory protein, LuxR family | 1087 | 3728 | |
THC0290_N_0469 | intra | 780456:780505 - | A594 B183 C44 | 5.52 | -2.44 | new transcription segment | 1088 | 950 | |
THC0290_0650 | mraZ | CDS | 784611:785084 + | A1711 B546 C143 | 11.43 | 1.15 | Protein MraZ | 1099 | 3149 |
THC0290_0651 | mraW | CDS | 785092:785967 + | A1711 B546 C143 | 11.21 | 1.06 | S-adenosyl-methyltransferase MraW | 1100 | 3147 |
THC0290_N_0478 | intra | 794901:794953 + | A477 B170 C44 | 11.95 | -1.07 | new transcription segment | 1111 | 630 | |
THC0290_N_0484 | 3prime | 802212:803155 + | A1248 B419 C125 | 7.32 | 1.27 | new transcription segment | 1125 | 2359 | |
THC0290_N_0485 | 3prime | 803148:803240 - | A1242 B419 C125 | 8.84 | 1.50 | new transcription segment | 1127 | 2320 | |
THC0290_N_0486 | Rfp35 | indep | 803241:803318 - | A1641 B540 C143 | 11.42 | 2.01 | new transcription segment | 1128 | 2980 |
THC0290_0666 | rpoD | CDS | 803319:804182 - | A1641 B540 C143 | 13.14 | 1.82 | RNA polymerase sigma-70 factor RpoD | 1129 | 2979 |
THC0290_0670 | CDS | 807710:809137 - | A1762 B546 C143 | 10.31 | 1.12 | Probable nucleoside-diphosphate-sugar epimerase | 1135 | 3400 | |
THC0290_0671 | phrB3 | CDS | 809155:810447 - | A1742 B546 C143 | 8.45 | 1.70 | Deoxyribodipyrimidine photolyase PhrB3 | 1136 | 3225 |
THC0290_0672 | CDS | 810444:812006 - | A1742 B546 C143 | 8.25 | 1.59 | Protein of unknown function related to deoxyribodipyrimidine photolyase | 1137 | 3226 | |
THC0290_N_0492 | intra | 812007:812083 - | A1747 B546 C143 | 9.50 | 2.53 | new transcription segment | 1138 | 3270 | |
THC0290_0673 | phrB2 | CDS | 812084:813592 - | A1763 B546 C143 | 8.94 | 2.05 | Deoxyribodipyrimidine photolyase PhrB2 | 1139 | 3439 |
THC0290_0674 | CDS | 813604:814233 - | A1763 B546 C143 | 9.46 | 1.83 | Protein of unknown function | 1140 | 3440 | |
THC0290_0675 | CDS | 814274:814693 - | A1763 B546 C143 | 9.85 | 2.55 | Protein of unknown function | 1141 | 3443 | |
THC0290_0676 | CDS | 814714:815004 - | A1763 B546 C143 | 10.38 | 2.87 | Protein of unknown function | 1142 | 3444 | |
THC0290_0680 | CDS | 816720:817085 + | A1768 B546 C143 | 9.98 | 1.95 | Protein of unknown function | 1146 | 3721 | |
THC0290_N_0495 | intra | 817086:817137 + | A1674 B543 C143 | 10.27 | 4.94 | new transcription segment | 1147 | 3072 | |
THC0290_0681 | CDS | 817138:819144 + | A1674 B543 C143 | 12.22 | 5.20 | Probable TonB-dependent outer membrane receptor precursor | 1148 | 3071 | |
THC0290_0682 | CDS | 819184:819525 + | A1674 B543 C143 | 12.45 | 3.78 | Protein of unknown function | 1149 | 3069 | |
THC0290_0683 | CDS | 819616:819906 + | A1674 B543 C143 | 13.51 | 1.90 | Hypothetical protein | 1150 | 3070 | |
THC0290_N_0497 | intra | 819907:819970 + | A1674 B543 C143 | 11.48 | 6.01 | new transcription segment | 1151 | 3075 | |
THC0290_0684 | sulP | CDS | 819971:821572 + | A1674 B543 C143 | 13.32 | 5.81 | Probable sulfate permease | 1152 | 3076 |
THC0290_0685 | cynT | CDS | 821595:822230 + | A1674 B543 C143 | 13.75 | 4.73 | Carbonic anhydrase | 1153 | 3077 |
THC0290_N_0498 | 3prime | 822231:822315 + | A1674 B543 C143 | 10.07 | 3.88 | new transcription segment | 1154 | 3073 | |
THC0290_0686 | CDS | 822316:823008 + | A1674 B543 C143 | 11.55 | 2.66 | Transmembrane protein of unknown function, DedA family | 1155 | 3074 | |
THC0290_0688 | CDS | 823730:824341 - | A1449 B502 C142 | 11.04 | 1.42 | Probable hydrolase (HAD superfamily) | 1157 | 2639 | |
THC0290_0692 | CDS | 826788:828029 - | A1747 B546 C143 | 9.49 | 1.09 | Probable ABC-type transport system, permease component | 1162 | 3294 | |
THC0290_0695 | fspA | CDS | 830831:831442 - | A618 B183 C44 | 14.81 | -2.16 | Flavobacterial-specific protein antigen FspA precursor | 1170 | 1320 |
THC0290_N_0510 | Rfp36 | indep | 840044:840245 - | A1244 B419 C125 | 8.84 | 1.36 | new transcription segment | 1183 | 2343 |
THC0290_0707 | CDS | 844456:845016 + | A1762 B546 C143 | 13.02 | 1.54 | Putative transcriptional regulator | 1190 | 3410 | |
THC0290_N_0516 | 3prime | 844739:845012 - | A1684 B545 C143 | 7.15 | 1.64 | new transcription segment | 1191 | 3087 | |
THC0290_N_0517 | 3prime | 845017:845453 + | A1643 B540 C143 | 8.28 | 2.24 | new transcription segment | 1193 | 2986 | |
THC0290_N_0519 | 3prime | 846486:846777 - | A595 B183 C44 | 11.95 | -1.23 | new transcription segment | 1196 | 956 | |
THC0290_N_0521 | intra | 847348:847417 - | A454 B168 C44 | 9.92 | -1.76 | new transcription segment | 1199 | 589 | |
THC0290_0724 | irk | CDS | 859337:860293 - | A1604 B535 C143 | 8.93 | 1.51 | Inward rectifier potassium channel Irk | 1217 | 2888 |
THC0290_0725 | carB | CDS | 860354:863206 - | A787 B239 C67 | 10.60 | 2.39 | Carbamoyl-phosphate synthase large subunit | 1218 | 1675 |
THC0290_N_0526 | intra | 863207:863394 - | A787 B239 C67 | 10.70 | 2.65 | new transcription segment | 1219 | 1676 | |
THC0290_0728 | groL | CDS | 864839:866467 - | A840 B254 C69 | 12.88 | -1.80 | 60 kDa chaperonin GroEL | 1225 | 1749 |
THC0290_N_0530 | intra | 866468:866905 - | A840 B254 C69 | 13.21 | -1.64 | new transcription segment | 1226 | 1751 | |
THC0290_0729 | groS | CDS | 866906:867181 - | A840 B254 C69 | 12.64 | -1.93 | 10 kDa chaperonin GroES | 1227 | 1750 |
THC0290_N_0531 | 3prime | 867274:867320 - | A391 B149 C42 | 8.74 | 1.30 | new transcription segment | 1228 | 501 | |
THC0290_N_0536 | 3prime | 872624:872743 - | A1802 B553 C144 | 6.98 | 1.23 | new transcription segment | 1238 | 3889 | |
THC0290_N_0553 | intra | 893946:894137 + | A967 B307 C84 | 9.15 | 1.16 | new transcription segment | 1273 | 1910 | |
THC0290_0754 | CDS | 896547:899900 + | A1794 B549 C143 | 12.32 | 1.36 | Protein of unknown function precursor, putative adhesin | 1278 | 3851 | |
THC0290_N_0558 | 3prime | 906298:906570 - | A192 B70 C21 | 6.71 | -1.40 | new transcription segment | 1288 | 238 | |
THC0290_N_0563 | 3prime | 910894:911072 + | A1685 B545 C143 | 9.38 | 1.70 | new transcription segment | 1297 | 3089 | |
THC0290_0774 | CDS | 922230:925658 - | A1772 B546 C143 | 9.32 | 1.31 | Methylmalonyl-CoA mutase | 1316 | 3796 | |
THC0290_0777 | CDS | 926970:927692 + | A1244 B419 C125 | 10.52 | 1.02 | Protein of unknown function precursor | 1320 | 2345 | |
THC0290_N_0573 | Rfp40 | indep | 927787:927860 + | A1768 B546 C143 | 7.49 | 2.75 | new transcription segment | 1321 | 3602 |
THC0290_0779 | CDS | 928488:929126 + | A1765 B546 C143 | 9.00 | 1.46 | Probable pyrophosphohydrolase | 1324 | 3550 | |
THC0290_N_0575 | 3prime | 929531:929992 - | A1226 B417 C125 | 7.54 | 1.47 | new transcription segment | 1326 | 2297 | |
THC0290_0781 | CDS | 929993:930601 - | A1232 B419 C125 | 8.57 | 1.15 | Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor | 1327 | 2305 | |
THC0290_0782 | CDS | 930615:931109 - | A1696 B546 C143 | 9.51 | 1.60 | RNA polymerase ECF-type sigma factor | 1328 | 3106 | |
THC0290_0784 | CDS | 932625:933680 - | A1768 B546 C143 | 8.47 | 1.23 | Probable transmembrane protein of unknown function | 1331 | 3664 | |
THC0290_N_0576 | 3prime | 935243:935309 + | A1855 B570 C149 | 12.44 | -1.42 | new transcription segment | 1333 | 3953 | |
THC0290_0788 | CDS | 938186:938767 + | A1795 B549 C143 | 11.51 | 2.34 | Protein of unknown function precursor | 1337 | 3853 | |
THC0290_N_0578 | intra | 938768:938895 + | A1765 B546 C143 | 8.61 | 2.33 | new transcription segment | 1338 | 3482 | |
THC0290_0789 | CDS | 938927:940153 + | A578 B183 C44 | 11.77 | -1.06 | Glu/Leu/Phe/Val dehydrogenase family protein | 1339 | 865 | |
THC0290_N_0579 | 5prime | 940174:940237 + | A578 B183 C44 | 12.52 | -1.05 | new transcription segment | 1340 | 867 | |
THC0290_0790 | CDS | 940238:940999 + | A578 B183 C44 | 11.19 | -1.33 | Hypothetical protein | 1341 | 866 | |
THC0290_N_0580 | intra | 941000:941283 + | A667 B187 C46 | 11.22 | -1.67 | new transcription segment | 1342 | 1441 | |
THC0290_N_0581 | repeated_region | 942166:942314 + | A866 B262 C70 | 9.04 | -1.39 | new transcription segment | 1344 | 1791 | |
THC0290_0793 | CDS | 943571:944119 - | A1088 B365 C107 | 9.69 | -4.13 | Probable transmembrane protein of unknown function | 1347 | 2094 | |
THC0290_0794 | fhuA | CDS | 944125:946380 - | A1088 B365 C107 | 10.35 | -4.71 | Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA | 1348 | 2095 |
THC0290_0806 | pcm | CDS | 960228:960869 + | A311 B117 C33 | 10.57 | -1.08 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase | 1370 | 396 |
THC0290_N_0591 | 3prime | 960870:961013 + | A414 B156 C44 | 10.34 | -1.52 | new transcription segment | 1371 | 529 | |
THC0290_N_0592 | 3prime | 962079:962138 + | A1190 B409 C123 | 8.03 | 1.59 | new transcription segment | 1373 | 2230 | |
THC0290_0808 | CDS | 962645:964048 + | A1749 B546 C143 | 9.75 | 1.07 | Probable transmembrane protein of unknown function | 1374 | 3315 | |
THC0290_N_0593 | 3prime | 965318:965499 - | A1747 B546 C143 | 8.45 | 1.87 | new transcription segment | 1376 | 3273 | |
THC0290_N_0602 | intra | 977563:977781 - | A1244 B419 C125 | 9.79 | 1.10 | new transcription segment | 1394 | 2344 | |
THC0290_0824 | ppiA | CDS | 982856:983950 + | A601 B183 C44 | 12.29 | -1.58 | Probable peptidyl-prolyl cis-trans isomerase precursor PpiA | 1400 | 1177 |
THC0290_0825 | ppiB | CDS | 983971:985056 + | A601 B183 C44 | 12.10 | -1.82 | Probable peptidyl-prolyl cis-trans isomerase precursor PpiB | 1401 | 1178 |
THC0290_0828 | CDS | 988051:988332 - | A1762 B546 C143 | 13.25 | 1.33 | Protein of unknown function | 1405 | 3391 | |
THC0290_0829 | CDS | 988595:989146 + | A1762 B546 C143 | 11.41 | 1.03 | Probable ribosomal-protein-amino-adic N-acetyltransferase | 1406 | 3411 | |
THC0290_0832 | dcp2 | CDS | 990238:992370 - | A1796 B549 C143 | 10.14 | 1.91 | Peptidyl-dipeptidase precursor Dcp2 | 1410 | 3876 |
THC0290_0853 | yfkH | CDS | 1012228:1013175 + | A601 B183 C44 | 9.80 | -1.21 | Protein of unknown function YfkH | 1442 | 1168 |
THC0290_N_0621 | 3prime | 1016422:1016591 - | A1765 B546 C143 | 12.77 | 1.10 | new transcription segment | 1446 | 3553 | |
THC0290_N_0622 | 3prime | 1016526:1016771 + | A1837 B563 C145 | 5.90 | -1.12 | new transcription segment | 1447 | 3931 | |
THC0290_N_0625 | intra | 1018645:1018746 + | A810 B244 C67 | 7.10 | -1.69 | new transcription segment | 1453 | 1709 | |
THC0290_0860 | CDS | 1018747:1019220 + | A586 B183 C44 | 8.44 | -1.19 | Protein of unknown function | 1454 | 912 | |
THC0290_0864 | CDS | 1022534:1022812 + | A1006 B320 C87 | 4.86 | -1.10 | Restriction endonuclease (fragment) | 1459 | 1961 | |
THC0290_N_0629 | intra | 1024365:1024417 - | A451 B168 C44 | 9.71 | -1.04 | new transcription segment | 1463 | 584 | |
THC0290_0876 | gene | 1033238:1033369 - | A1768 B546 C143 | 8.31 | 1.53 | protein of unknown function (fragment) | 1476 | 3691 | |
THC0290_0877 | gene | 1033435:1033563 - | A1747 B546 C143 | 8.34 | 1.73 | Cytosine-specific methyltransferase (fragment) | 1477 | 3272 | |
THC0290_0878 | CDS | 1034261:1036504 + | A1796 B549 C143 | 10.38 | 6.39 | Protein of unknown function precursor, putative adhesin | 1478 | 3881 | |
THC0290_N_0633 | intra | 1038177:1038243 + | A1765 B546 C143 | 8.47 | 1.19 | new transcription segment | 1481 | 3561 | |
THC0290_0881 | rprX | CDS | 1038245:1039828 + | A1765 B546 C143 | 10.49 | 1.27 | Two-component system sensor histidine kinase RprX | 1482 | 3521 |
THC0290_0882 | rprY | CDS | 1039832:1040533 + | A1765 B546 C143 | 12.84 | 1.64 | Two-component system response regulatory protein RprY | 1483 | 3516 |
THC0290_0883 | ytxJ | CDS | 1040596:1040982 + | A1644 B540 C143 | 9.52 | 2.26 | Protein of unknown function YtxJ | 1485 | 2993 |
THC0290_N_0635 | 3prime | 1040983:1041081 + | A1644 B540 C143 | 8.69 | 2.01 | new transcription segment | 1486 | 2994 | |
THC0290_0891 | CDS | 1048948:1050882 + | A967 B307 C84 | 12.08 | 2.63 | Probable ATP-dependent RNA helicase, DEAD/DEAH box family | 1499 | 1911 | |
THC0290_N_0640 | 3prime | 1050883:1050942 + | A969 B307 C84 | 7.11 | 2.67 | new transcription segment | 1500 | 1914 | |
THC0290_0893 | CDS | 1052483:1053235 + | A1753 B546 C143 | 10.11 | 1.59 | Protein of unknown function precursor | 1503 | 3355 | |
THC0290_0894 | (yfcA) | CDS | 1053252:1054037 + | A1753 B546 C143 | 10.68 | 1.24 | Probable transmembrane protein of unknown function | 1504 | 3347 |
THC0290_0910 | CDS | 1070654:1073071 + | A623 B183 C44 | 10.35 | -1.03 | Protein of unknown function | 1529 | 1336 | |
THC0290_0911 | crcB | CDS | 1073072:1073446 + | A629 B183 C44 | 10.52 | -1.18 | Protein of unknown function CrcB | 1530 | 1353 |
THC0290_0912 | CDS | 1073443:1074720 + | A601 B183 C44 | 9.64 | -1.02 | Glycosyl transferase, group 1 family protein | 1531 | 1137 | |
THC0290_tRNA_0017 | tRNA | 1081988:1082061 + | A1769 B546 C143 | 12.45 | 1.64 | transfer RNA-Thr | 1548 | 3766 | |
THC0290_0923 | CDS | 1082679:1084841 + | A207 B76 C24 | 7.91 | -2.94 | Probable TonB-dependent outer membrane receptor precursor | 1550 | 265 | |
THC0290_N_0656 | intra | 1084910:1084987 + | A207 B76 C24 | 6.55 | -5.16 | new transcription segment | 1551 | 264 | |
THC0290_0924 | CDS | 1084988:1086520 + | A207 B76 C24 | 7.76 | -3.14 | Probable transmembrane protein of unknown function | 1552 | 266 | |
THC0290_N_0657 | intra | 1087045:1087158 + | A1085 B365 C107 | 11.50 | -1.00 | new transcription segment | 1554 | 2076 | |
THC0290_0926 | ftnA | CDS | 1087175:1087702 + | A1414 B488 C140 | 14.39 | 1.56 | Ferritin | 1555 | 2589 |
THC0290_N_0659 | 3prime | 1087703:1087790 + | A1747 B546 C143 | 8.13 | 2.94 | new transcription segment | 1557 | 3275 | |
THC0290_0931 | CDS | 1092634:1095516 + | A1796 B549 C143 | 12.89 | 6.04 | Collagenase precursor | 1565 | 3878 | |
THC0290_N_0663 | 3prime | 1095517:1095601 + | A1795 B549 C143 | 9.81 | 6.17 | new transcription segment | 1566 | 3854 | |
THC0290_0932 | trmU | CDS | 1096121:1097308 - | A1357 B469 C136 | 11.46 | 1.04 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | 1567 | 2518 |
THC0290_0942 | clpB | CDS | 1110287:1112887 + | A1213 B415 C124 | 10.97 | -2.32 | ATPase with chaperone activity ATP-binding subunit | 1585 | 2277 |
THC0290_N_0672 | 3prime-PT | 1113082:1113329 + | A1214 B415 C124 | 5.43 | -2.56 | new transcription segment | 1588 | 2278 | |
THC0290_N_0675 | Rfp45 | indep | 1119827:1119911 - | A1765 B546 C143 | 9.05 | 3.12 | new transcription segment | 1595 | 3510 |
THC0290_0951 | gene | 1123621:1123923 - | A321 B120 C33 | 5.53 | -1.52 | Fragment of Protein of unknown function precursor (part 2) | 1604 | 408 | |
THC0290_N_0682 | intra | 1125260:1125357 - | A296 B110 C31 | 5.08 | -1.80 | new transcription segment | 1609 | 381 | |
THC0290_0954 | CDS | 1125358:1125897 - | A542 B180 C44 | 13.60 | -1.11 | Protein of unknown function | 1610 | 763 | |
THC0290_0960 | CDS | 1130977:1132209 - | A1779 B546 C143 | 10.11 | 1.36 | Major facilitator superfamily (MFS) permease | 1619 | 3815 | |
THC0290_0962 | CDS | 1132895:1133551 + | A1514 B519 C143 | 9.60 | 1.10 | TatD-related DNase | 1621 | 2741 | |
THC0290_N_0687 | 3prime | 1134182:1134362 - | A197 B70 C21 | 8.66 | 2.05 | new transcription segment | 1624 | 244 | |
THC0290_N_0688 | 3prime | 1134356:1134819 + | A1820 B557 C145 | 6.96 | 1.02 | new transcription segment | 1625 | 3913 | |
THC0290_N_0689 | 3prime-PT | 1135956:1136305 - | A572 B183 C44 | 7.95 | -1.74 | new transcription segment | 1629 | 847 | |
THC0290_0967 | CDS | 1136352:1137419 - | A103 B45 C16 | 12.53 | -1.25 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase family protein | 1630 | 126 | |
THC0290_0968 | CDS | 1137665:1138330 + | A1601 B535 C143 | 10.11 | 1.16 | Protein of unknown function | 1631 | 2880 | |
THC0290_N_0692 | 3prime-PT | 1138630:1139078 + | A1766 B546 C143 | 8.08 | 3.33 | new transcription segment | 1633 | 3562 | |
THC0290_0971 | CDS | 1139820:1141016 - | A108 B45 C16 | 8.94 | -1.08 | Protein of unknown function | 1635 | 136 | |
THC0290_N_0694 | 3prime | 1141686:1141770 - | A99 B44 C16 | 6.31 | -2.83 | new transcription segment | 1638 | 120 | |
THC0290_0977 | CDS | 1147602:1149359 - | A1795 B549 C143 | 7.59 | 5.33 | Esterase/lipase/thioesterase family protein precursor | 1647 | 3864 | |
THC0290_0978 | katG | CDS | 1149873:1152080 + | A1791 B549 C143 | 11.84 | 4.70 | Bi-functional catalase-peroxidase | 1649 | 3846 |
THC0290_0979 | CDS | 1152256:1152894 + | A1864 B574 C149 | 14.04 | 1.37 | Probable peroxiredoxin | 1650 | 3964 | |
THC0290_N_0699 | intra | 1152895:1152978 + | A1864 B574 C149 | 9.36 | 1.62 | new transcription segment | 1651 | 3965 | |
THC0290_0981 | CDS | 1153330:1153587 + | A1864 B574 C149 | 12.59 | 1.49 | Hypothetical protein | 1653 | 3963 | |
THC0290_N_0701 | 3prime-PT | 1153613:1154322 + | A1661 B542 C143 | 6.85 | 1.71 | new transcription segment | 1654 | 3034 | |
THC0290_0982 | CDS | 1153638:1155428 - | A696 B197 C51 | 12.34 | 1.73 | Acyl-CoA dehydrogenase family protein | 1655 | 1505 | |
THC0290_N_0702 | intra | 1155429:1155590 - | A694 B196 C51 | 10.48 | 1.48 | new transcription segment | 1656 | 1501 | |
THC0290_0983 | CDS | 1155591:1156772 - | A696 B197 C51 | 11.78 | 2.11 | Acetyl-CoA C-acyltransferase | 1657 | 1506 | |
THC0290_N_0703 | intra | 1156773:1156906 - | A696 B197 C51 | 12.80 | 1.30 | new transcription segment | 1658 | 1508 | |
THC0290_0984 | CDS | 1156907:1157287 - | A696 B197 C51 | 12.29 | 1.37 | Protein of unknown function | 1659 | 1507 | |
THC0290_0985 | CDS | 1157332:1159722 - | A696 B197 C51 | 12.26 | 2.24 | 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein | 1660 | 1504 | |
THC0290_0986 | CDS | 1159706:1160173 - | A884 B274 C75 | 11.32 | 2.17 | Probable transcriptional regulator, MarR-family | 1661 | 1810 | |
THC0290_N_0709 | 5prime | 1168710:1168824 + | A838 B254 C69 | 9.02 | -3.30 | new transcription segment | 1671 | 1746 | |
THC0290_0994 | lon | CDS | 1168825:1171275 + | A837 B254 C69 | 11.05 | -2.02 | S16 family, ATP-dependent endopeptidase La | 1672 | 1744 |
THC0290_N_0710 | intra | 1171276:1171449 + | A836 B254 C69 | 7.26 | -2.03 | new transcription segment | 1673 | 1743 | |
THC0290_0998 | CDS | 1174719:1175126 - | A600 B183 C44 | 12.70 | -1.44 | Hypothetical protein | 1679 | 1075 | |
THC0290_0999 | CDS | 1175136:1176107 - | A600 B183 C44 | 12.59 | -1.34 | Protein of unknown function | 1680 | 1076 | |
THC0290_N_0716 | intra | 1181201:1181289 + | A459 B168 C44 | 10.07 | -1.33 | new transcription segment | 1689 | 596 | |
THC0290_N_0717 | Rfp47 | indep | 1182025:1182142 + | A1683 B545 C143 | 10.74 | 2.07 | new transcription segment | 1691 | 3086 |
THC0290_N_0720 | intra | 1186425:1186520 - | A1875 B578 C149 | 12.45 | 1.10 | new transcription segment | 1697 | 3978 | |
THC0290_N_0723 | intra | 1192145:1192355 + | A1747 B546 C143 | 10.28 | 2.29 | new transcription segment | 1705 | 3248 | |
THC0290_N_0725 | 3prime | 1194079:1194140 + | A632 B183 C44 | 5.39 | -3.02 | new transcription segment | 1709 | 1365 | |
THC0290_1019 | kdpC | CDS | 1200577:1201131 + | A1629 B539 C143 | 7.24 | 1.24 | Potassium-transporting ATPase C subunit | 1715 | 2945 |
THC0290_1027 | gene | 1208124:1208453 - | A1452 B504 C142 | 8.13 | 1.23 | Conserved membrane protein of unknown function (fragment) | 1726 | 2644 | |
THC0290_1030 | gene | 1209004:1209357 - | A1375 B472 C137 | 11.29 | 1.04 | Sterol desaturase family protein (fragment) | 1730 | 2543 | |
THC0290_1035 | CDS | 1212972:1213316 + | A1762 B546 C143 | 14.62 | 1.07 | Protein of unknown function | 1736 | 3394 | |
THC0290_N_0733 | 3prime | 1213317:1213392 + | A1762 B546 C143 | 8.84 | 1.93 | new transcription segment | 1737 | 3413 | |
THC0290_N_0741 | 3prime-PT | 1222587:1222769 + | A164 B61 C19 | 7.95 | 1.15 | new transcription segment | 1756 | 204 | |
THC0290_1048 | CDS | 1225034:1227307 - | A1156 B395 C120 | 9.13 | 1.05 | Protein of unknown function precursor, putative adhesin | 1758 | 2190 | |
THC0290_1054 | CDS | 1231465:1232691 - | A1765 B546 C143 | 10.28 | 3.14 | Protein of unknown function precursor containing a C-terminal secretion signal | 1769 | 3479 | |
THC0290_1055 | CDS | 1233132:1235285 + | A556 B183 C44 | 8.50 | -2.88 | Probable outer membrane protein precursor | 1770 | 805 | |
THC0290_1056 | CDS | 1235407:1236027 + | A556 B183 C44 | 10.49 | -2.93 | Protein of unknown function | 1771 | 806 | |
THC0290_N_0747 | intra | 1236028:1236085 + | A556 B183 C44 | 9.39 | -2.25 | new transcription segment | 1772 | 804 | |
THC0290_1057 | CDS | 1236086:1237453 + | A556 B183 C44 | 10.69 | -2.56 | Membrane protein containing an internal histidine kinase domain | 1773 | 810 | |
THC0290_1058 | CDS | 1237456:1237776 + | A556 B183 C44 | 10.03 | -1.68 | Protein of unknown function | 1774 | 811 | |
THC0290_1059 | CDS | 1237798:1238103 + | A556 B183 C44 | 10.65 | -1.47 | Protein of unknown function | 1775 | 809 | |
THC0290_1060 | CDS | 1238111:1238461 + | A556 B183 C44 | 10.47 | -1.62 | Protein of unknown function | 1776 | 812 | |
THC0290_N_0748 | intra | 1238462:1238530 + | A556 B183 C44 | 9.31 | -1.83 | new transcription segment | 1777 | 807 | |
THC0290_1061 | CDS | 1238531:1239292 + | A556 B183 C44 | 9.70 | -1.27 | Two-component system response regulatory protein, LytTR family | 1778 | 808 | |
THC0290_1078 | CDS | 1255885:1257000 - | A494 B173 C44 | 9.05 | -1.02 | Putative mannosyltransferase | 1799 | 659 | |
THC0290_1085 | CDS | 1265923:1266828 + | A1243 B419 C125 | 9.25 | 1.34 | Probable lipoprotein precursor | 1812 | 2322 | |
THC0290_1090 | CDS | 1270459:1271454 - | A725 B207 C54 | 9.50 | 1.72 | Probable M43 cytophagalysin family metalloprotease precursor | 1819 | 1582 | |
THC0290_N_0762 | intra | 1278815:1278864 + | A354 B133 C37 | 5.03 | -1.83 | new transcription segment | 1825 | 454 | |
THC0290_1099 | CDS | 1283185:1284720 + | A1792 B549 C143 | 10.47 | 1.53 | Protein of unknown function | 1836 | 3847 | |
THC0290_N_0768 | 3prime | 1284560:1285017 - | A190 B69 C21 | 7.41 | -1.12 | new transcription segment | 1837 | 236 | |
THC0290_N_0769 | intra | 1284721:1285209 + | A1794 B549 C143 | 8.49 | 1.36 | new transcription segment | 1838 | 3850 | |
THC0290_1100 | yojE | CDS | 1285018:1285905 - | A572 B183 C44 | 8.08 | -1.83 | Probable permease YojE | 1839 | 846 |
THC0290_N_0770 | intra | 1285919:1286213 - | A754 B223 C61 | 8.29 | -1.59 | new transcription segment | 1840 | 1628 | |
THC0290_N_0771 | Rfp49 | indep | 1288802:1288918 - | A1765 B546 C143 | 7.54 | 1.26 | new transcription segment | 1843 | 3531 |
THC0290_1114 | CDS | 1299960:1300283 - | A1721 B546 C143 | 10.29 | 5.02 | Probable transcriptional regulator, ArsR family | 1864 | 3174 | |
THC0290_N_0785 | 3prime | 1307664:1307713 + | A1766 B546 C143 | 8.01 | 1.25 | new transcription segment | 1874 | 3564 | |
THC0290_1122 | CDS | 1309549:1311003 - | A581 B183 C44 | 9.35 | -1.08 | Probable modification methyltransferase | 1877 | 883 | |
THC0290_1124 | CDS | 1311834:1313342 - | A578 B183 C44 | 8.62 | -1.11 | Protein of unknown function | 1879 | 860 | |
THC0290_N_0787 | intra | 1316615:1316949 - | A1715 B546 C143 | 9.19 | 2.40 | new transcription segment | 1883 | 3157 | |
THC0290_1135 | CDS | 1327350:1327610 - | A1768 B546 C143 | 6.81 | 1.10 | Hypothetical protein | 1893 | 3711 | |
THC0290_1137 | CDS | 1329295:1330215 - | A1795 B549 C143 | 7.77 | 3.26 | Probable transcriptional regulator, AraC family | 1895 | 3873 | |
THC0290_1138 | CDS | 1330262:1330645 - | A1795 B549 C143 | 7.84 | 3.06 | Hypothetical protein | 1896 | 3857 | |
THC0290_1149 | gene | 1338209:1338670 + | A1744 B546 C143 | 5.53 | 1.90 | Truncated protein, C-terminal region | 1907 | 3229 | |
THC0290_1150 | CDS | 1338848:1339387 + | A1747 B546 C143 | 5.52 | 2.96 | Probable transcriptional regulator, AraC family | 1908 | 3267 | |
THC0290_1151 | CDS | 1339398:1339592 + | A1668 B542 C143 | 4.44 | 1.12 | Hypothetical protein | 1909 | 3052 | |
THC0290_1159 | CDS | 1350968:1351213 + | A1371 B470 C136 | 6.53 | 1.09 | Probable transcriptional coactivator/pterin dehydratase | 1917 | 2538 | |
THC0290_1163 | CDS | 1354235:1354834 + | A1528 B521 C143 | 5.11 | 2.14 | Probable lipoprotein precursor | 1921 | 2765 | |
THC0290_1167 | CDS | 1358484:1360820 + | A930 B291 C80 | 5.36 | -1.36 | Glycosyl transferase, group 1 family protein | 1925 | 1866 | |
THC0290_1169 | CDS | 1361836:1362495 + | A1634 B540 C143 | 7.40 | 1.34 | Probable transport-associated protein | 1927 | 2956 | |
THC0290_1174 | CDS | 1364836:1365252 + | A1634 B540 C143 | 6.97 | 1.25 | Probable OsmC family protein | 1933 | 2957 | |
THC0290_1175 | gene | 1365267:1365341 + | A1193 B410 C123 | 7.72 | 3.01 | Truncated protein N-terminal region | 1934 | 2234 | |
THC0290_1177 | gene | 1366017:1366154 + | A1747 B546 C143 | 6.21 | 1.73 | Truncated protein | 1936 | 3305 | |
THC0290_1193 | CDS | 1381373:1381627 + | A1768 B546 C143 | 8.77 | 2.74 | Hypothetical protein | 1953 | 3714 | |
THC0290_1194 | CDS | 1381701:1381925 + | A1668 B542 C143 | 6.34 | 1.35 | Hypothetical protein | 1954 | 3053 | |
THC0290_1195 | CDS | 1381938:1382327 + | A1768 B546 C143 | 5.90 | 1.76 | Hypothetical protein | 1955 | 3708 | |
THC0290_1200 | CDS | 1384769:1384954 + | A1747 B546 C143 | 7.92 | 1.10 | CsbD family protein | 1960 | 3271 | |
THC0290_1201 | CDS | 1384990:1385493 + | A1765 B546 C143 | 8.00 | 1.06 | Hypothetical lipoprotein precursor | 1961 | 3467 | |
THC0290_1202 | CDS | 1385642:1386292 + | A1742 B546 C143 | 7.14 | 1.82 | Protein of unknown function precursor | 1962 | 3222 | |
THC0290_1203 | CDS | 1386310:1386462 + | A1311 B450 C132 | 7.12 | 1.54 | Conserved exported protein of unknown function | 1963 | 2453 | |
THC0290_1204 | CDS | 1386496:1386726 + | A1768 B546 C143 | 9.21 | 1.66 | Hypothetical protein | 1964 | 3689 | |
THC0290_1205 | CDS | 1386748:1387101 + | A1768 B546 C143 | 7.77 | 1.71 | Hypothetical protein | 1965 | 3690 | |
THC0290_1206 | CDS | 1387098:1387430 + | A1380 B474 C137 | 6.90 | 1.16 | Hypothetical protein | 1966 | 2548 | |
THC0290_1207 | CDS | 1387510:1389336 - | A1768 B546 C143 | 7.23 | 1.05 | Protein of unknown function | 1967 | 3716 | |
THC0290_1223 | CDS | 1418395:1418796 - | A1795 B549 C143 | 9.97 | 1.71 | Protein of unknown function | 2000 | 3874 | |
THC0290_N_0801 | 3prime | 1418443:1418638 + | A502 B176 C44 | 5.72 | -1.10 | new transcription segment | 2001 | 670 | |
THC0290_1231 | CDS | 1425441:1426022 - | A1542 B522 C143 | 8.22 | -1.13 | Probable transmembrane protein of unknown function | 2013 | 2785 | |
THC0290_1237 | CDS | 1429217:1429477 - | A684 B192 C48 | 7.89 | -2.15 | Hypothetical transmembrane protein | 2019 | 1484 | |
THC0290_1238 | CDS | 1429483:1430496 - | A684 B192 C48 | 6.31 | -4.38 | Cytochrome c oxidase family protein | 2020 | 1485 | |
THC0290_1239 | CDS | 1430503:1432671 - | A688 B193 C48 | 7.37 | -2.50 | Cytochrome c oxidase family protein | 2021 | 1494 | |
THC0290_1242 | CDS | 1434834:1435964 - | A707 B201 C52 | 9.55 | -2.85 | Probable membrane fusion efflux lipoprotein precursor | 2025 | 1536 | |
THC0290_1243 | CDS | 1435961:1436539 - | A707 B201 C52 | 8.56 | -3.79 | Probable transcriptional regulator, TetR family | 2026 | 1537 | |
THC0290_N_0806 | Rfp55 | indep | 1436072:1436459 + | A1768 B546 C143 | 6.89 | 1.19 | new transcription segment | 2027 | 3667 |
THC0290_1244 | CDS | 1436703:1437329 - | A1768 B546 C143 | 9.28 | 1.46 | Probable transcriptional regulatory protein, Crp/Fnr family | 2028 | 3709 | |
THC0290_N_0809 | intra | 1437888:1437991 - | A543 B180 C44 | 5.84 | -3.26 | new transcription segment | 2031 | 765 | |
THC0290_1245 | CDS | 1438036:1438314 - | A545 B180 C44 | 11.14 | -1.23 | Thiol:disulfide interchange protein, C-terminal region | 2032 | 772 | |
THC0290_N_0811 | intra | 1438315:1438460 - | A545 B180 C44 | 11.87 | -1.37 | new transcription segment | 2033 | 774 | |
THC0290_N_0814 | Rfp56 | indep | 1444415:1444724 - | A1768 B546 C143 | 7.25 | 2.20 | new transcription segment | 2041 | 3700 |
THC0290_N_0816 | intra | 1446727:1446954 - | A1795 B549 C143 | 9.13 | 1.21 | new transcription segment | 2045 | 3872 | |
THC0290_1253 | CDS | 1446955:1448118 - | A1762 B546 C143 | 10.62 | 1.01 | Probable two-component system response regulatory protein - glycosyl transferase, group 2 family protein | 2046 | 3395 | |
THC0290_1254 | CDS | 1448226:1451315 + | A1664 B542 C143 | 7.65 | 1.77 | Probable transmembrane protein | 2047 | 3043 | |
THC0290_1255 | CDS | 1451315:1452553 + | A1874 B578 C149 | 7.60 | 1.88 | Protein of unknown function precursor | 2048 | 3976 | |
THC0290_1256 | CDS | 1452537:1454093 + | A1602 B535 C143 | 8.18 | 1.32 | Glycoside hydrolase, family 5 | 2049 | 2882 | |
THC0290_1257 | CDS | 1454090:1455256 - | A1795 B549 C143 | 9.25 | 2.26 | Glycosyl transferase, group 1 family protein | 2050 | 3868 | |
THC0290_1258 | CDS | 1455281:1456540 - | A1795 B549 C143 | 7.58 | 2.37 | Putative capsular polysaccharide biosynthesis protein | 2051 | 3866 | |
THC0290_N_0817 | 5prime | 1457741:1458011 + | A1769 B546 C143 | 9.67 | -1.19 | new transcription segment | 2053 | 3746 | |
THC0290_1260 | acsA | CDS | 1458012:1459919 + | A713 B202 C53 | 11.70 | -1.06 | Acetate--CoA ligase | 2054 | 1549 |
THC0290_N_0821 | 3prime | 1467104:1468011 - | A1779 B546 C143 | 8.71 | 1.36 | new transcription segment | 2065 | 3813 | |
THC0290_1270 | CDS | 1468900:1469292 + | A1615 B535 C143 | 11.15 | 1.88 | Protein of unknown function | 2068 | 2917 | |
THC0290_N_0822 | 3prime | 1469293:1469476 + | A1615 B535 C143 | 10.00 | 2.26 | new transcription segment | 2069 | 2918 | |
THC0290_1273 | hisA | CDS | 1470665:1471390 - | A708 B202 C53 | 5.13 | -1.32 | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase | 2072 | 1538 |
THC0290_N_0823 | intra | 1472127:1472214 - | A708 B202 C53 | 4.66 | -1.27 | new transcription segment | 2075 | 1539 | |
THC0290_1276 | hisC | CDS | 1473351:1474391 - | A709 B202 C53 | 6.68 | -1.05 | Histidinol-phosphate transaminase | 2077 | 1541 |
THC0290_N_0831 | 3prime | 1485875:1486044 + | A1642 B540 C143 | 7.60 | 1.15 | new transcription segment | 2094 | 2982 | |
THC0290_1287 | ppx | CDS | 1486086:1486976 - | A1076 B360 C106 | 10.48 | -1.03 | Exopolyphosphatase | 2096 | 2048 |
THC0290_1291 | CDS | 1490287:1490424 - | A1698 B546 C143 | 6.20 | 2.19 | Conserved protein of unknown function (fragment) | 2102 | 3110 | |
THC0290_N_0834 | 3prime-PT | 1490841:1491055 - | A1526 B521 C143 | 5.22 | 1.83 | new transcription segment | 2103 | 2760 | |
THC0290_1293 | CDS | 1492056:1492418 - | A601 B183 C44 | 10.87 | -1.59 | Protein of unknown function | 2106 | 1174 | |
THC0290_1294 | CDS | 1492421:1493350 - | A601 B183 C44 | 11.89 | -1.57 | Probable UDP-N-acetylglucosamine acyltransferase | 2107 | 1175 | |
THC0290_1295 | efp | CDS | 1493357:1493920 - | A601 B183 C44 | 11.82 | -1.31 | Elongation factor P (EF-P) | 2108 | 1173 |
THC0290_N_0837 | intra | 1493921:1493987 - | A600 B183 C44 | 10.83 | -1.07 | new transcription segment | 2109 | 1087 | |
THC0290_N_0838 | intra | 1494771:1494824 - | A600 B183 C44 | 11.42 | -1.33 | new transcription segment | 2111 | 1082 | |
THC0290_N_0840 | Rfp57 | indep | 1497415:1497522 + | A1768 B546 C143 | 7.44 | 1.50 | new transcription segment | 2116 | 3647 |
THC0290_1304 | CDS | 1504654:1505688 - | A470 B170 C44 | 6.59 | -2.36 | Probable transcriptional regulator, AraC family | 2125 | 617 | |
THC0290_N_0845 | 3prime | 1507414:1507684 + | A570 B183 C44 | 5.86 | -2.03 | new transcription segment | 2129 | 844 | |
THC0290_1307 | CDS | 1507520:1509589 - | A1775 B546 C143 | 8.06 | 1.00 | Probable TonB-dependent outer membrane receptor precursor | 2130 | 3800 | |
THC0290_N_0846 | intra | 1509590:1509687 - | A1775 B546 C143 | 8.65 | 1.30 | new transcription segment | 2131 | 3801 | |
THC0290_1308 | CDS | 1509688:1510665 - | A1775 B546 C143 | 7.79 | 1.14 | Protein of unknown function precursor | 2132 | 3799 | |
THC0290_1309 | gene | 1510782:1511459 + | A1765 B546 C143 | 11.51 | 2.01 | Fragment of two-component system sensor histidine kinase (part 1) | 2133 | 3489 | |
THC0290_1311 | gene | 1512751:1513449 + | A1765 B546 C143 | 9.07 | 2.85 | Fragment of two-component system sensor histidine kinase (part 2) | 2135 | 3491 | |
THC0290_1320 | CDS | 1521863:1523305 - | A600 B183 C44 | 11.34 | -1.25 | Phosphate transporter family protein | 2144 | 1105 | |
THC0290_1323 | CDS | 1525827:1527404 + | A526 B180 C44 | 9.47 | -1.24 | Probable S41 family peptidase | 2147 | 709 | |
THC0290_1324 | CDS | 1527411:1529042 + | A601 B183 C44 | 10.08 | -1.56 | Probable M1 family metalloprotease precursor | 2148 | 1179 | |
THC0290_1325 | CDS | 1529121:1529963 + | A319 B119 C33 | 9.12 | -1.26 | Probable transcriptional regulator, AraC family | 2149 | 405 | |
THC0290_N_0847 | intra | 1529964:1530048 + | A319 B119 C33 | 9.44 | -1.97 | new transcription segment | 2150 | 406 | |
THC0290_1326 | ybcL | CDS | 1530049:1530588 + | A692 B195 C50 | 12.69 | 3.62 | Probable phospholipid-binding protein precursor YbcL | 2151 | 1498 |
THC0290_1327 | CDS | 1530569:1530829 + | A692 B195 C50 | 12.46 | 3.36 | Protein of unknown function | 2152 | 1499 | |
THC0290_1332 | CDS | 1537097:1537567 + | A1763 B546 C143 | 10.08 | 3.49 | Protein of unknown function | 2157 | 3441 | |
THC0290_1333 | CDS | 1537570:1538268 + | A1763 B546 C143 | 10.06 | 3.34 | Probable short-chain type dehydrogenase | 2158 | 3442 | |
THC0290_1334 | phrB1 | CDS | 1538431:1539717 + | A1763 B546 C143 | 9.32 | 2.35 | Deoxyribodipyrimidine photolyase PhrB1 | 2160 | 3436 |
THC0290_1335 | CDS | 1539932:1540345 + | A1449 B502 C142 | 11.10 | 3.99 | Probable two-component system response regulatory protein | 2161 | 2640 | |
THC0290_1336 | CDS | 1540353:1540895 + | A1763 B546 C143 | 11.04 | 3.11 | Protein of unknown function containing an heme NO Binding domain | 2162 | 3430 | |
THC0290_1337 | CDS | 1540897:1543509 + | A1762 B546 C143 | 10.50 | 2.42 | Two-component system sensor histidine kinase | 2163 | 3388 | |
THC0290_1338 | CDS | 1543512:1544648 + | A1876 B578 C149 | 10.70 | 2.10 | Protein of unknown function | 2164 | 3979 | |
THC0290_1339 | CDS | 1544648:1545673 + | A1876 B578 C149 | 10.18 | 2.29 | Probable two-component system sensor histidine kinase | 2165 | 3980 | |
THC0290_1340 | CDS | 1545673:1545990 + | A1876 B578 C149 | 9.99 | 1.94 | Probable two-component system histidine-containing phosphotransfer protein (HPt) | 2166 | 3981 | |
THC0290_1341 | CDS | 1546003:1546728 + | A83 B38 C15 | 9.86 | 1.11 | Two-component system response regulatory protein, LytTR family | 2167 | 99 | |
THC0290_N_0849 | 3prime | 1546143:1546768 - | A1665 B542 C143 | 8.46 | 2.14 | new transcription segment | 2168 | 3046 | |
THC0290_N_0850 | 3prime | 1546729:1546916 + | A179 B65 C21 | 8.09 | 1.32 | new transcription segment | 2169 | 223 | |
THC0290_1342 | CDS | 1546769:1548826 - | A1669 B542 C143 | 9.56 | 1.24 | Protein of unknown function precursor | 2170 | 3057 | |
THC0290_1343 | CDS | 1549155:1552811 - | A1795 B549 C143 | 9.45 | 4.98 | Protein of unknown function precursor containing PKD domains and a C-terminal secretion signal | 2171 | 3855 | |
THC0290_1344 | CDS | 1552913:1553296 - | A1795 B549 C143 | 9.45 | 4.75 | Transposase IS1 family | 2172 | 3856 | |
THC0290_1348 | bfmBA | CDS | 1558467:1560443 - | A600 B183 C44 | 11.28 | -1.03 | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) | 2180 | 1107 |
THC0290_N_0856 | intra | 1561715:1561857 + | A459 B168 C44 | 10.29 | -1.01 | new transcription segment | 2183 | 597 | |
THC0290_N_0861 | 3prime | 1567995:1568077 - | A1770 B546 C143 | 10.89 | 1.14 | new transcription segment | 2196 | 3793 | |
THC0290_1358 | ung | CDS | 1568078:1568740 - | A1768 B546 C143 | 9.31 | 1.41 | Uracil-DNA glycosylase | 2197 | 3718 |
THC0290_N_0865 | 3prime | 1580293:1580351 + | A1768 B546 C143 | 8.92 | 1.37 | new transcription segment | 2208 | 3722 | |
THC0290_N_0867 | 3prime-PT | 1580352:1580535 + | A1676 B543 C143 | 6.87 | 1.72 | new transcription segment | 2210 | 3079 | |
THC0290_1369 | CDS | 1581298:1582101 - | A636 B183 C44 | 8.03 | -1.44 | Probable short-chain type dehydrogenase | 2214 | 1373 | |
THC0290_1370 | CDS | 1582125:1582283 - | A636 B183 C44 | 7.04 | -1.98 | Truncated chloromuconate cycloisomerase | 2215 | 1372 | |
THC0290_N_0869 | 3prime | 1582284:1582335 - | A503 B176 C44 | 5.58 | -2.90 | new transcription segment | 2216 | 671 | |
THC0290_1371 | CDS | 1582522:1583574 + | A315 B119 C33 | 9.44 | -1.72 | Putative glutamine cyclotransferase | 2218 | 401 | |
THC0290_1372 | CDS | 1584148:1584330 - | A1458 B505 C142 | 11.89 | 1.61 | Hypothetical protein | 2221 | 2652 | |
THC0290_1385 | mscL | CDS | 1595085:1595501 + | A601 B183 C44 | 13.83 | -1.43 | Large-conductance mechanosensitive channel | 2241 | 1180 |
THC0290_N_0880 | intra | 1595502:1595628 + | A611 B183 C44 | 9.80 | -1.93 | new transcription segment | 2242 | 1288 | |
THC0290_tRNA_0022 | tRNA | 1599447:1599524 + | A1768 B546 C143 | 13.54 | 2.13 | transfer RNA-Val | 2249 | 3669 | |
THC0290_N_0884 | Rfp62 | indep | 1606778:1606919 + | A1243 B419 C125 | 9.06 | 1.50 | new transcription segment | 2258 | 2325 |
THC0290_N_0891 | 3prime | 1613876:1614068 + | A504 B177 C44 | 8.92 | -1.61 | new transcription segment | 2272 | 673 | |
THC0290_N_0893 | intra | 1616095:1616417 - | A601 B183 C44 | 8.55 | -1.13 | new transcription segment | 2275 | 1128 | |
THC0290_1399 | CDS | 1616418:1617146 - | A601 B183 C44 | 8.97 | -1.62 | Probable transmembrane protein of unknown function | 2276 | 1127 | |
THC0290_1400 | aldH | CDS | 1617164:1618492 - | A600 B183 C44 | 9.28 | -1.18 | Aldehyde dehydrogenase | 2277 | 1074 |
THC0290_1401 | CDS | 1618519:1619214 - | A600 B183 C44 | 10.12 | -1.15 | Probable 23S rRNA pseudouridine synthase | 2278 | 1077 | |
THC0290_1402 | CDS | 1619248:1620525 - | A600 B183 C44 | 9.13 | -1.11 | Probable S41 family peptidase precursor | 2279 | 1100 | |
THC0290_N_0903 | Rfp64 | indep | 1635872:1635993 - | A1768 B546 C143 | 11.83 | 2.34 | new transcription segment | 2299 | 3683 |
THC0290_1414 | ltaE | CDS | 1636033:1637058 - | A1768 B546 C143 | 10.84 | 1.35 | Threonine aldolase | 2300 | 3637 |
THC0290_N_0904 | 5prime | 1637059:1637201 - | A1768 B546 C143 | 10.44 | 1.25 | new transcription segment | 2301 | 3639 | |
THC0290_N_0905 | 5prime | 1637088:1637440 + | A1563 B526 C143 | 13.25 | 1.09 | new transcription segment | 2302 | 2829 | |
THC0290_1419 | CDS | 1642538:1643158 - | A1561 B526 C143 | 9.98 | 1.22 | Putative translation factor | 2309 | 2824 | |
THC0290_1421 | CDS | 1645706:1646227 + | A609 B183 C44 | 9.70 | -1.08 | Probable transmembrane protein of unknown function | 2312 | 1270 | |
THC0290_1422 | CDS | 1646261:1647379 + | A530 B180 C44 | 9.39 | -1.13 | Protein of unknown function | 2313 | 721 | |
THC0290_1424 | CDS | 1649508:1651811 + | A1787 B549 C143 | 10.35 | 2.32 | Probable aminotransferase | 2316 | 3838 | |
THC0290_N_0909 | 3prime | 1651812:1652166 + | A1795 B549 C143 | 9.46 | 2.13 | new transcription segment | 2317 | 3867 | |
THC0290_1425 | dnaK | CDS | 1652269:1654149 - | A840 B254 C69 | 13.40 | -2.87 | Chaperone protein DnaK | 2319 | 1755 |
THC0290_N_0917 | intra | 1658744:1659049 - | A590 B183 C44 | 9.12 | -1.25 | new transcription segment | 2327 | 937 | |
THC0290_1430 | CDS | 1659050:1662235 - | A581 B183 C44 | 10.15 | -1.22 | Putative N6 adenine-specific DNA methyltransferase | 2328 | 891 | |
THC0290_N_0918 | intra | 1662236:1662355 - | A843 B255 C69 | 10.34 | -1.76 | new transcription segment | 2329 | 1762 | |
THC0290_1431 | CDS | 1662356:1662937 - | A843 B255 C69 | 10.33 | -1.14 | Probable transmembrane protein of unknown function | 2330 | 1761 | |
THC0290_1433 | CDS | 1664543:1665136 + | A1762 B546 C143 | 8.91 | 2.42 | Protein of unknown function | 2333 | 3408 | |
THC0290_N_0923 | 3prime | 1669052:1669388 + | A1659 B542 C143 | 7.81 | 1.54 | new transcription segment | 2340 | 3032 | |
THC0290_N_0929 | 3prime | 1673625:1673962 + | A1644 B540 C143 | 6.71 | 1.20 | new transcription segment | 2352 | 2990 | |
THC0290_N_0930 | intra | 1675609:1675691 - | A1765 B546 C143 | 10.23 | 1.69 | new transcription segment | 2354 | 3540 | |
THC0290_1444 | CDS | 1675692:1676540 - | A1762 B546 C143 | 11.38 | 1.51 | Protein of unknown function | 2355 | 3424 | |
THC0290_N_0934 | 3prime-PT | 1680444:1680996 - | A1836 B563 C145 | 4.92 | -1.19 | new transcription segment | 2362 | 3929 | |
THC0290_N_0937 | 5prime | 1681345:1681454 - | A1762 B546 C143 | 8.36 | 1.48 | new transcription segment | 2368 | 3420 | |
THC0290_1450 | yuxK | CDS | 1683750:1684166 + | A601 B183 C44 | 10.35 | -1.26 | Protein of unknown function YuxK | 2373 | 1176 |
THC0290_1451 | CDS | 1684233:1684379 + | A699 B199 C52 | 11.02 | -3.91 | Hypothetical protein | 2376 | 1516 | |
THC0290_1458 | CDS | 1691337:1691852 - | A493 B173 C44 | 9.51 | -1.25 | Protein of unknown function | 2386 | 657 | |
THC0290_N_0946 | intra | 1695609:1695759 - | A611 B183 C44 | 10.70 | -1.52 | new transcription segment | 2389 | 1287 | |
THC0290_1468 | yjgF | CDS | 1704276:1704656 + | A595 B183 C44 | 11.49 | -1.89 | Protein of unknown function YjgF | 2401 | 966 |
THC0290_N_0953 | 3prime | 1704683:1704758 - | A1126 B376 C109 | 9.22 | 1.30 | new transcription segment | 2403 | 2158 | |
THC0290_N_0956 | intra | 1711585:1711685 + | A378 B144 C41 | 4.89 | -1.43 | new transcription segment | 2409 | 484 | |
THC0290_1473 | CDS | 1713087:1713590 + | A611 B183 C44 | 9.64 | -1.24 | Probable transmembrane protein of unknown function | 2411 | 1289 | |
THC0290_N_0957 | 3prime-PT | 1713144:1713623 - | A128 B53 C18 | 5.85 | -1.78 | new transcription segment | 2412 | 161 | |
THC0290_N_0965 | intra | 1721778:1721907 + | A1552 B523 C143 | 8.52 | 1.03 | new transcription segment | 2427 | 2804 | |
THC0290_N_0969 | 5prime | 1724967:1725040 - | A1745 B546 C143 | 9.50 | 1.07 | new transcription segment | 2435 | 3242 | |
THC0290_N_0970 | intra | 1725860:1725948 + | A1500 B514 C143 | 9.04 | 1.45 | new transcription segment | 2437 | 2717 | |
THC0290_N_0976 | 3prime | 1730076:1730154 - | A1573 B530 C143 | 9.60 | 2.63 | new transcription segment | 2449 | 2842 | |
THC0290_1494 | CDS | 1730155:1732128 - | A1761 B546 C143 | 11.48 | 1.32 | Probable ribonuclease | 2450 | 3382 | |
THC0290_N_0977 | 5prime | 1732129:1732257 - | A1768 B546 C143 | 10.81 | 1.59 | new transcription segment | 2451 | 3627 | |
THC0290_1496 | CDS | 1735654:1738056 + | A536 B180 C44 | 12.09 | -2.02 | Putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits | 2454 | 733 | |
THC0290_N_0983 | 3prime | 1741575:1741661 + | A1765 B546 C143 | 9.73 | 2.69 | new transcription segment | 2461 | 3492 | |
THC0290_1506 | CDS | 1747485:1748612 + | A600 B183 C44 | 9.25 | -1.01 | Probable cysteine desulfurase | 2471 | 1102 | |
THC0290_N_0989 | 5prime | 1752255:1752334 - | A435 B165 C44 | 12.00 | -1.22 | new transcription segment | 2476 | 562 | |
THC0290_1509 | CDS | 1752478:1752975 + | A1416 B488 C140 | 7.19 | 5.61 | Protein of unknown function | 2477 | 2595 | |
THC0290_1510 | gene | 1752990:1753640 + | A1416 B488 C140 | 8.20 | 5.03 | Conserved exported protein of unknown function (fragment) | 2479 | 2596 | |
THC0290_1514 | CDS | 1759087:1759686 + | A1416 B488 C140 | 10.53 | 4.21 | Probable peroxiredoxin | 2484 | 2593 | |
THC0290_1515 | CDS | 1759690:1760178 + | A1416 B488 C140 | 10.47 | 3.91 | Protein of unknown function | 2485 | 2594 | |
THC0290_1516 | CDS | 1760166:1760876 + | A1416 B488 C140 | 9.70 | 3.49 | Protein of unknown function | 2486 | 2592 | |
THC0290_1517 | gene | 1760953:1761909 + | A1416 B488 C140 | 6.85 | 3.07 | Conserved protein of unknown function | 2487 | 2597 | |
THC0290_1520 | CDS | 1763992:1765833 + | A789 B239 C67 | 11.58 | 1.10 | Probable endonuclease precursor | 2491 | 1678 | |
THC0290_1526 | CDS | 1774415:1775356 - | A1796 B549 C143 | 11.07 | 3.61 | Protein of unknown function precursor | 2501 | 3879 | |
THC0290_1527 | CDS | 1775368:1782057 - | A1796 B549 C143 | 11.90 | 3.84 | Protein of unknown function precursor containing a C-terminal secretion signal. Putative adhesin | 2502 | 3880 | |
THC0290_N_0998 | repeated_region | 1782230:1782819 + | A1766 B546 C143 | 7.40 | 2.00 | new transcription segment | 2504 | 3566 | |
THC0290_N_0999 | intra | 1783775:1784020 - | A600 B183 C44 | 10.43 | -1.12 | new transcription segment | 2507 | 1065 | |
THC0290_N_1000 | intra | 1785218:1785270 - | A598 B183 C44 | 8.21 | -1.21 | new transcription segment | 2510 | 996 | |
THC0290_1531 | CDS | 1785271:1786122 - | A598 B183 C44 | 9.28 | -1.54 | Probable outer membrane protein precursor, OmpA family | 2511 | 995 | |
THC0290_N_1004 | 3prime | 1788343:1788481 - | A1665 B542 C143 | 10.59 | 1.42 | new transcription segment | 2517 | 3045 | |
THC0290_N_1005 | 5prime | 1789837:1789892 + | A75 B35 C14 | 12.94 | -1.17 | new transcription segment | 2519 | 86 | |
THC0290_1542 | CDS | 1796696:1797148 + | A1765 B546 C143 | 10.25 | 5.80 | Protein of unknown function | 2535 | 3480 | |
THC0290_1543 | CDS | 1797232:1798140 + | A1765 B546 C143 | 11.35 | 2.17 | Probable nucleoside-diphosphate sugar epimerase | 2537 | 3481 | |
THC0290_1544 | grpE | CDS | 1798337:1798909 + | A840 B254 C69 | 12.14 | -2.09 | Chaperone protein GrpE | 2539 | 1753 |
THC0290_N_1015 | intra | 1798910:1798967 + | A831 B252 C69 | 4.49 | -1.27 | new transcription segment | 2540 | 1738 | |
THC0290_1545 | dnaJ | CDS | 1798968:1800092 + | A840 B254 C69 | 12.08 | -1.94 | Chaperone protein DnaJ | 2541 | 1754 |
THC0290_N_1019 | intra | 1801177:1801257 + | A1552 B523 C143 | 12.41 | 3.48 | new transcription segment | 2545 | 2803 | |
THC0290_N_1025 | 3prime | 1804918:1804974 - | A1552 B523 C143 | 6.20 | 2.52 | new transcription segment | 2555 | 2807 | |
THC0290_N_1029 | 3prime | 1808220:1808762 + | A1152 B393 C120 | 7.52 | 1.38 | new transcription segment | 2563 | 2185 | |
THC0290_N_1031 | 3prime | 1811565:1811830 + | A1643 B540 C143 | 8.72 | 1.43 | new transcription segment | 2568 | 2983 | |
THC0290_tRNA_0029 | tRNA | 1813116:1813192 + | A1684 B545 C143 | 12.46 | 1.22 | transfer RNA-His | 2573 | 3088 | |
THC0290_N_1040 | repeated_region | 1817889:1818312 - | A1008 B320 C87 | 6.02 | -1.69 | new transcription segment | 2583 | 1963 | |
THC0290_1569 | CDS | 1824808:1827336 + | A1796 B549 C143 | 10.79 | 5.93 | Probable TonB-dependent outer membrane siderophore receptor precursor | 2592 | 3877 | |
THC0290_1580 | folE1 | CDS | 1836146:1836817 - | A1350 B467 C136 | 11.82 | 1.25 | GTP cyclohydrolase I | 2609 | 2506 |
THC0290_1581 | mrsA | CDS | 1836820:1837458 - | A1751 B546 C143 | 12.15 | 1.60 | Protein-methionine-S-oxide reductase MsrA | 2610 | 3334 |
THC0290_1584 | trmE | CDS | 1839466:1840854 + | A1557 B526 C143 | 9.86 | 1.52 | tRNA modification GTPase TrmE | 2614 | 2817 |
THC0290_1586 | CDS | 1842055:1842597 + | A1765 B546 C143 | 7.78 | 1.92 | RNA polymerase ECF-type sigma factor | 2618 | 3498 | |
THC0290_1587 | CDS | 1842628:1843008 + | A1765 B546 C143 | 8.41 | 2.22 | Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor | 2619 | 3499 | |
THC0290_1588 | CDS | 1843019:1843477 + | A1765 B546 C143 | 9.57 | 2.70 | Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor | 2620 | 3500 | |
THC0290_N_1054 | 3prime | 1843478:1843604 + | A1765 B546 C143 | 9.57 | 3.34 | new transcription segment | 2621 | 3497 | |
THC0290_1589 | gene | 1843630:1844010 - | A1765 B546 C143 | 8.48 | 1.97 | Truncated protein, C-terminal region (fragment) | 2622 | 3487 | |
THC0290_1590 | gene | 1844029:1844682 - | A1765 B546 C143 | 8.82 | 1.15 | Truncated protein, N-terminal region (fragment) | 2624 | 3488 | |
THC0290_1593 | gene | 1848100:1848249 - | A1765 B546 C143 | 7.87 | 5.16 | Truncated transposase ISNCY family, central region | 2628 | 3508 | |
THC0290_N_1057 | 5prime | 1848250:1848475 - | A1795 B549 C143 | 7.50 | 4.34 | new transcription segment | 2629 | 3871 | |
THC0290_1594 | CDS | 1848581:1850773 - | A1795 B549 C143 | 10.39 | 8.05 | Protein of unknown function | 2630 | 3865 | |
THC0290_1595 | CDS | 1851066:1852952 + | A1762 B546 C143 | 13.17 | 2.24 | Protein of unknown function precursor, putative adhesin | 2631 | 3405 | |
THC0290_N_1058 | intra | 1852953:1853067 + | A1762 B546 C143 | 11.55 | 2.38 | new transcription segment | 2632 | 3406 | |
THC0290_N_1059 | Rfp68 | indep | 1853069:1853412 + | A1762 B546 C143 | 12.54 | 3.14 | new transcription segment | 2633 | 3407 |
THC0290_N_1062 | 5prime | 1856154:1856259 - | A926 B287 C78 | 7.16 | -2.21 | new transcription segment | 2638 | 1861 | |
THC0290_N_1065 | intra | 1859407:1859479 - | A1518 B521 C143 | 11.43 | 2.27 | new transcription segment | 2644 | 2747 | |
THC0290_N_1066 | intra | 1860611:1860781 - | A1241 B419 C125 | 9.16 | 1.01 | new transcription segment | 2646 | 2318 | |
THC0290_N_1072 | 5prime | 1868837:1869005 - | A838 B254 C69 | 9.15 | -3.44 | new transcription segment | 2658 | 1747 | |
THC0290_N_1082 | intra | 1882842:1883282 - | A1768 B546 C143 | 9.93 | 1.15 | new transcription segment | 2681 | 3651 | |
THC0290_N_1083 | 3prime | 1885363:1885897 + | A1217 B416 C125 | 7.98 | 1.16 | new transcription segment | 2684 | 2283 | |
THC0290_N_1087 | intra | 1888625:1888779 + | A1207 B415 C124 | 10.76 | -1.54 | new transcription segment | 2693 | 2265 | |
THC0290_1628 | CDS | 1888799:1889020 + | A1207 B415 C124 | 13.45 | -1.00 | Protein of unknown function | 2694 | 2264 | |
THC0290_N_1088 | 3prime | 1889021:1889095 + | A1207 B415 C124 | 8.36 | -2.34 | new transcription segment | 2695 | 2263 | |
THC0290_1629 | secA | CDS | 1889096:1892446 + | A840 B254 C69 | 12.07 | -2.00 | Preprotein translocase SecA subunit | 2696 | 1752 |
THC0290_1630 | CDS | 1892517:1893479 - | A206 B76 C24 | 12.85 | -1.27 | Protein of unknown function precursor | 2697 | 262 | |
THC0290_N_1090 | 3prime-PT | 1894530:1894615 - | A206 B76 C24 | 9.98 | -1.09 | new transcription segment | 2699 | 261 | |
THC0290_1634 | CDS | 1896238:1896348 + | A1760 B546 C143 | 11.51 | 1.83 | Hypothetical protein | 2705 | 3372 | |
THC0290_N_1094 | 3prime | 1896419:1896833 - | A1665 B542 C143 | 9.44 | 1.44 | new transcription segment | 2706 | 3044 | |
THC0290_N_1097 | intra | 1901071:1901159 - | A1714 B546 C143 | 10.98 | 1.01 | new transcription segment | 2715 | 3156 | |
THC0290_1640 | CDS | 1901160:1902068 - | A1714 B546 C143 | 10.55 | 1.49 | Probable transmembrane protein of unknown function | 2716 | 3155 | |
THC0290_1646 | CDS | 1909087:1909674 + | A600 B183 C44 | 11.30 | -1.26 | Scramblase family protein | 2728 | 1045 | |
THC0290_N_1103 | intra | 1909675:1909760 + | A601 B183 C44 | 12.11 | -1.59 | new transcription segment | 2729 | 1133 | |
THC0290_1647 | CDS | 1909761:1911260 + | A601 B183 C44 | 10.65 | -1.52 | Hypothetical transmembrane protein | 2730 | 1134 | |
THC0290_N_1104 | intra | 1911261:1911481 + | A612 B183 C44 | 9.70 | -1.73 | new transcription segment | 2731 | 1295 | |
THC0290_1648 | CDS | 1911482:1911874 + | A601 B183 C44 | 10.43 | -1.70 | Protein of unknown function | 2732 | 1135 | |
THC0290_1649 | CDS | 1912055:1912162 + | A601 B183 C44 | 9.41 | -1.12 | Hypothetical protein | 2734 | 1131 | |
THC0290_N_1106 | 3prime | 1912769:1912987 + | A601 B183 C44 | 7.93 | -1.11 | new transcription segment | 2736 | 1116 | |
THC0290_N_1108 | 3prime | 1915355:1915609 + | A858 B259 C70 | 7.27 | -1.01 | new transcription segment | 2739 | 1781 | |
THC0290_1652 | yfbK | CDS | 1915596:1917491 - | A1763 B546 C143 | 9.89 | 4.13 | Probable outer membrane protein precursor YfbK | 2740 | 3433 |
THC0290_1653 | CDS | 1917528:1918436 - | A1763 B546 C143 | 9.00 | 3.22 | Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor | 2741 | 3434 | |
THC0290_1654 | CDS | 1918439:1918975 - | A1763 B546 C143 | 9.19 | 3.46 | RNA polymerase ECF-type sigma factor | 2742 | 3435 | |
THC0290_N_1109 | 3prime-PT | 1920516:1920593 - | A794 B241 C67 | 5.50 | -1.22 | new transcription segment | 2745 | 1683 | |
THC0290_N_1112 | 3prime | 1924112:1924383 + | A1765 B546 C143 | 9.97 | 1.09 | new transcription segment | 2749 | 3533 | |
THC0290_tRNA_0030 | tRNA | 1927023:1927100 + | A1768 B546 C143 | 13.56 | 2.22 | transfer RNA-Val | 2755 | 3670 | |
THC0290_N_1120 | 3prime | 1932156:1932279 - | A536 B180 C44 | 6.99 | -2.89 | new transcription segment | 2764 | 732 | |
THC0290_1668 | vdh | CDS | 1932280:1933383 - | A536 B180 C44 | 12.24 | -3.09 | Valine dehydrogenase | 2765 | 734 |
THC0290_1672 | secDF | CDS | 1936499:1939483 - | A599 B183 C44 | 12.54 | -1.52 | Preprotein translocase SecD and SecF subunits | 2769 | 1024 |
THC0290_N_1125 | Rfp73 | indep | 1939566:1939699 + | A1768 B546 C143 | 7.64 | 3.15 | new transcription segment | 2771 | 3684 |
THC0290_N_1130 | intra | 1947110:1947393 + | A1747 B546 C143 | 9.06 | 1.58 | new transcription segment | 2781 | 3269 | |
THC0290_N_1132 | 3prime | 1949618:1949685 - | A1346 B466 C135 | 7.39 | 1.13 | new transcription segment | 2785 | 2497 | |
THC0290_1680 | CDS | 1949686:1951449 - | A1749 B546 C143 | 9.34 | 1.39 | Probable TonB-dependent outer membrane receptor precursor | 2786 | 3320 | |
THC0290_1681 | CDS | 1951511:1954522 - | A1749 B546 C143 | 9.64 | 1.42 | TPR-domain containing protein | 2788 | 3327 | |
THC0290_N_1134 | Rfp74 | indep | 1954656:1954725 - | A1749 B546 C143 | 8.07 | 2.12 | new transcription segment | 2789 | 3325 |
THC0290_N_1137 | 5prime | 1957428:1957643 - | A350 B129 C35 | 11.96 | -1.20 | new transcription segment | 2795 | 450 | |
THC0290_1685 | CDS | 1957762:1958214 + | A1720 B546 C143 | 11.59 | 1.45 | Probable transcriptional regulator, MarR-family | 2796 | 3172 | |
THC0290_N_1138 | 3prime | 1959433:1959477 + | A1720 B546 C143 | 7.36 | 1.79 | new transcription segment | 2799 | 3173 | |
THC0290_N_1140 | intra | 1961109:1961220 + | A718 B205 C53 | 5.56 | -1.52 | new transcription segment | 2803 | 1560 | |
THC0290_N_1143 | intra | 1965574:1965769 + | A715 B202 C53 | 8.57 | -1.55 | new transcription segment | 2811 | 1553 | |
THC0290_1694 | trpA | CDS | 1965770:1966531 + | A715 B202 C53 | 8.63 | -1.29 | Tryptophan synthase, alpha subunit | 2813 | 1552 |
THC0290_1701 | CDS | 1974131:1975327 + | A683 B191 C48 | 8.45 | -1.17 | Protein of unknown function precursor | 2826 | 1482 | |
THC0290_1703 | CDS | 1976672:1977127 - | A1768 B546 C143 | 10.73 | 1.07 | Hypothetical transmembrane protein | 2829 | 3699 | |
THC0290_N_1150 | intra | 1977128:1977205 - | A1768 B546 C143 | 11.96 | 1.43 | new transcription segment | 2830 | 3702 | |
THC0290_1704 | CDS | 1977206:1977442 - | A1768 B546 C143 | 11.77 | 1.02 | Hypothetical transmembrane protein | 2831 | 3662 | |
THC0290_N_1151 | repeated_region | 1977443:1978208 - | A1768 B546 C143 | 8.32 | 1.79 | new transcription segment | 2832 | 3596 | |
THC0290_1706 | CDS | 1979849:1980568 + | A608 B183 C44 | 8.28 | -1.23 | Hypothetical protein | 2834 | 1263 | |
THC0290_1707 | CDS | 1980570:1981727 + | A532 B180 C44 | 8.12 | -1.04 | Probable type I restriction-modification system, DNA specificity domain protein | 2835 | 724 | |
THC0290_1708 | CDS | 1981738:1982421 + | A532 B180 C44 | 7.67 | -1.37 | Hypothetical protein | 2836 | 725 | |
THC0290_1709 | CDS | 1982411:1982950 + | A48 B27 C13 | 7.51 | -1.21 | Protein of unknown function | 2837 | 55 | |
THC0290_1710 | CDS | 1983089:1985917 + | A600 B183 C44 | 8.68 | -1.17 | Probable type I restriction endonuclease | 2840 | 1088 | |
THC0290_1711 | CDS | 1986678:1987886 - | A481 B171 C44 | 10.08 | -1.92 | Probable penicillin-binding protein precursor | 2842 | 634 | |
THC0290_N_1154 | 5prime | 1987994:1988043 + | A931 B292 C81 | 5.03 | -1.66 | new transcription segment | 2843 | 1867 | |
THC0290_N_1156 | 3prime | 1990528:1990800 - | A1715 B546 C143 | 9.02 | 1.61 | new transcription segment | 2847 | 3161 | |
THC0290_N_1160 | 3prime | 1993681:1993757 - | A943 B298 C82 | 5.77 | 2.12 | new transcription segment | 2854 | 1882 | |
THC0290_N_1161 | Rfp78 | indep | 1995370:1995588 + | A1768 B546 C143 | 8.22 | 2.18 | new transcription segment | 2856 | 3686 |
THC0290_N_1166 | 5prime | 2005128:2005343 - | A1768 B546 C143 | 9.10 | 1.22 | new transcription segment | 2869 | 3671 | |
THC0290_1720 | CDS | 2005180:2006193 + | A1779 B546 C143 | 13.38 | 1.49 | Hypothetical lipoprotein precursor | 2870 | 3819 | |
THC0290_N_1167 | intra | 2006194:2006263 + | A1779 B546 C143 | 11.46 | 1.99 | new transcription segment | 2871 | 3820 | |
THC0290_1721 | CDS | 2006264:2007796 + | A1779 B546 C143 | 11.92 | 1.16 | Protein of unknown function precursor | 2872 | 3818 | |
THC0290_1722 | CDS | 2008149:2009450 + | A967 B307 C84 | 10.75 | 2.30 | Protein of unknown function | 2874 | 1912 | |
THC0290_N_1174 | 3prime | 2016593:2016664 + | A933 B292 C81 | 11.00 | -2.50 | new transcription segment | 2884 | 1869 | |
THC0290_1734 | (dciA) | CDS | 2022210:2022506 - | A1768 B546 C143 | 11.00 | 1.03 | Involved in the control of replication initiation | 2892 | 3675 |
THC0290_1735 | CDS | 2022508:2022927 - | A1768 B546 C143 | 11.62 | 1.13 | Protein of unknown function | 2893 | 3676 | |
THC0290_N_1177 | 5prime | 2022928:2023018 - | A1615 B535 C143 | 10.93 | 1.31 | new transcription segment | 2894 | 2920 | |
THC0290_1736 | CDS | 2023096:2024181 + | A1765 B546 C143 | 8.80 | 1.51 | Probable penicillin-binding protein precursor | 2895 | 3495 | |
THC0290_N_1178 | 3prime | 2024212:2024277 - | A1714 B546 C143 | 7.65 | 1.04 | new transcription segment | 2896 | 3153 | |
THC0290_N_1180 | 3prime | 2033014:2033819 - | A1765 B546 C143 | 8.20 | 3.02 | new transcription segment | 2906 | 3509 | |
THC0290_1745 | CDS | 2033820:2034134 - | A1768 B546 C143 | 8.90 | 3.14 | Probable transcriptional regulator, HxlR family | 2908 | 3599 | |
THC0290_N_1184 | 3prime | 2039320:2039368 + | A1848 B568 C149 | 8.27 | 1.78 | new transcription segment | 2917 | 3946 | |
THC0290_N_1190 | Rfp79 | indep | 2044074:2044275 + | A1768 B546 C143 | 9.63 | 2.86 | new transcription segment | 2931 | 3597 |
THC0290_N_1192 | 3prime | 2048058:2048409 - | A1839 B563 C145 | 6.81 | 1.31 | new transcription segment | 2938 | 3934 | |
THC0290_1765 | aroK | CDS | 2048410:2048928 - | A1362 B469 C136 | 8.21 | 1.60 | Shikimate kinase | 2939 | 2524 |
THC0290_N_1193 | 3prime | 2048419:2048605 + | A1812 B556 C144 | 10.11 | 1.01 | new transcription segment | 2940 | 3901 | |
THC0290_N_1194 | 5prime | 2048925:2049055 + | A1428 B496 C141 | 6.34 | -1.49 | new transcription segment | 2941 | 2610 | |
THC0290_1768 | crtI | CDS | 2051837:2053300 + | A1763 B546 C143 | 10.67 | 1.66 | Phytoene dehydrogenase | 2948 | 3446 |
THC0290_1769 | crtB | CDS | 2053302:2054141 + | A1763 B546 C143 | 10.31 | 1.74 | Phytoene synthase | 2949 | 3447 |
THC0290_1770 | crtZ | CDS | 2054147:2054587 + | A1763 B546 C143 | 11.01 | 2.05 | Carotene hydroxylase | 2950 | 3448 |
THC0290_1775 | CDS | 2057225:2058286 - | A601 B183 C44 | 12.81 | -2.07 | Probable lipoprotein precursor | 2957 | 1150 | |
THC0290_1777 | gpmA | CDS | 2060543:2061067 - | A530 B180 C44 | 6.39 | -1.61 | Phosphoglycerate mutase | 2960 | 720 |
THC0290_1778 | cobS | CDS | 2061052:2061828 - | A585 B183 C44 | 6.30 | -1.05 | Adenosylcobinamide-GDP ribazoletransferase | 2961 | 908 |
THC0290_N_1199 | Rfp80 | indep | 2063397:2064482 + | A1779 B546 C143 | 8.21 | 1.21 | new transcription segment | 2963 | 3809 |
THC0290_N_1200 | intra | 2063540:2063723 - | A513 B180 C44 | 8.59 | 1.05 | new transcription segment | 2964 | 685 | |
THC0290_1783 | CDS | 2065947:2066975 + | A948 B300 C82 | 8.31 | 1.20 | Probable ABC-type iron(III)-transport system, permease component | 2969 | 1887 | |
THC0290_1786 | CDS | 2068911:2069726 + | A1795 B549 C143 | 10.94 | 6.40 | Probable transmembrane protein of unknown function | 2972 | 3869 | |
THC0290_N_1203 | 3prime | 2074261:2074528 + | A291 B107 C30 | 7.41 | 1.79 | new transcription segment | 2979 | 376 | |
THC0290_N_1204 | intra | 2076042:2076157 - | A675 B189 C46 | 6.05 | -1.72 | new transcription segment | 2981 | 1456 | |
THC0290_1792 | CDS | 2076158:2076652 - | A470 B170 C44 | 9.53 | -1.39 | Putative acetyltransferase, GNAT family | 2982 | 618 | |
THC0290_N_1206 | intra | 2077689:2077767 - | A452 B168 C44 | 6.47 | -1.22 | new transcription segment | 2985 | 585 | |
THC0290_N_1207 | intra | 2079135:2079235 - | A1091 B367 C107 | 10.36 | -1.21 | new transcription segment | 2987 | 2111 | |
THC0290_N_1208 | 3prime | 2080646:2081110 - | A1088 B365 C107 | 9.03 | -3.62 | new transcription segment | 2989 | 2092 | |
THC0290_1796 | CDS | 2081111:2082283 - | A1088 B365 C107 | 10.95 | -4.56 | Probable lipoprotein precursor | 2990 | 2106 | |
THC0290_N_1209 | intra | 2082313:2082391 - | A1088 B365 C107 | 5.84 | -3.98 | new transcription segment | 2991 | 2091 | |
THC0290_1797 | CDS | 2082392:2083183 - | A1088 B365 C107 | 9.11 | -5.09 | Protein of unknown function precursor | 2992 | 2090 | |
THC0290_1798 | CDS | 2083190:2083714 - | A1088 B365 C107 | 8.83 | -6.00 | Protein of unknown function containing ankyrin repeat signature | 2993 | 2103 | |
THC0290_1799 | CDS | 2083726:2084730 - | A1088 B365 C107 | 9.20 | -5.18 | Protein of unknown function | 2994 | 2104 | |
THC0290_1800 | CDS | 2084766:2085770 - | A1088 B365 C107 | 9.76 | -4.75 | Protein of unknown function | 2995 | 2105 | |
THC0290_1801 | CDS | 2085799:2087151 - | A1088 B365 C107 | 7.68 | -5.63 | Protein of unknown function | 2996 | 2102 | |
THC0290_1802 | CDS | 2087189:2087410 - | A1088 B365 C107 | 9.13 | -4.61 | Hypothetical protein | 2997 | 2100 | |
THC0290_1803 | apbE | CDS | 2087394:2088356 - | A1088 B365 C107 | 8.39 | -3.96 | Membrane-associated protein involved in thiamine biosynthesis | 2998 | 2101 |
THC0290_1804 | CDS | 2088365:2088802 - | A1088 B365 C107 | 7.66 | -4.19 | Thioredoxin family protein | 2999 | 2081 | |
THC0290_1805 | CDS | 2088958:2090196 + | A1088 B365 C107 | 11.86 | -4.48 | Protein of unknown function | 3000 | 2097 | |
THC0290_N_1210 | intra | 2090197:2090249 + | A1088 B365 C107 | 7.85 | -5.58 | new transcription segment | 3001 | 2093 | |
THC0290_1806 | irpA | CDS | 2090250:2091365 + | A1088 B365 C107 | 12.75 | -2.86 | Iron-regulated protein A precursor | 3002 | 2098 |
THC0290_1807 | CDS | 2091368:2092735 + | A483 B172 C44 | 10.33 | -2.98 | Probable vitamin K-dependent gamma-carboxylase | 3003 | 636 | |
THC0290_1808 | fecA | CDS | 2092716:2095151 + | A483 B172 C44 | 9.74 | -2.46 | ABC-type iron(III) dicitrate-transport system component, TonB-dependent outer membrane receptor FecA precursor | 3004 | 637 |
THC0290_1811 | CDS | 2096360:2096578 - | A1088 B365 C107 | 6.80 | -5.74 | Protein of unknown function | 3010 | 2096 | |
THC0290_N_1214 | 3prime | 2096579:2096690 - | A1496 B512 C143 | 11.05 | -2.46 | new transcription segment | 3011 | 2713 | |
THC0290_1812 | (hmuY) | CDS | 2096691:2097335 - | A1088 B365 C107 | 12.19 | -4.92 | Putative heme binding lipoprotein precursor | 3012 | 2089 |
THC0290_1813 | CDS | 2097360:2097836 - | A1088 B365 C107 | 9.95 | -5.46 | Probable transmembrane protein of unknown function | 3013 | 2086 | |
THC0290_1814 | CDS | 2097857:2099929 - | A1088 B365 C107 | 8.24 | -3.48 | Probable TonB-dependent outer membrane receptor precursor | 3014 | 2082 | |
THC0290_1815 | CDS | 2100027:2100941 + | A1088 B365 C107 | 11.51 | -4.38 | Protein of unknown function precursor | 3015 | 2080 | |
THC0290_1816 | CDS | 2100947:2101285 + | A1088 B365 C107 | 10.55 | -5.10 | Protein of unknown function | 3016 | 2087 | |
THC0290_N_1217 | 5prime | 2103281:2103429 + | A1768 B546 C143 | 11.01 | 2.65 | new transcription segment | 3020 | 3624 | |
THC0290_1818 | CDS | 2103430:2107788 + | A1762 B546 C143 | 10.79 | 5.28 | Protein of unknown function precursor, putative adhesin | 3021 | 3404 | |
THC0290_1819 | CDS | 2107930:2110392 + | A777 B236 C67 | 11.16 | 1.35 | Probable TonB-dependent outer membrane receptor precursor | 3022 | 1663 | |
THC0290_1824 | CDS | 2113997:2115304 - | A1763 B546 C143 | 12.72 | 2.07 | Protein of unknown function | 3028 | 3437 | |
THC0290_1825 | CDS | 2115307:2115978 - | A1763 B546 C143 | 12.13 | 2.66 | Protein of unknown function | 3029 | 3438 | |
THC0290_1828 | htpG | CDS | 2117483:2119381 + | A840 B254 C69 | 11.68 | -3.00 | Chaperone protein HtpG | 3033 | 1756 |
THC0290_1829 | CDS | 2119432:2121534 - | A764 B228 C63 | 8.79 | 1.35 | Probable TonB-dependent outer membrane receptor precursor | 3034 | 1649 | |
THC0290_1830 | CDS | 2122074:2123462 + | A1765 B546 C143 | 8.16 | 2.61 | Protein of unknown function | 3035 | 3496 | |
THC0290_1831 | CDS | 2123616:2124782 + | A1765 B546 C143 | 7.68 | 2.74 | Twin-arginine translocation pathway signal sequence domain protein precusor | 3036 | 3494 | |
THC0290_1832 | fjo20 | CDS | 2124849:2125745 + | A1455 B504 C142 | 9.80 | 1.89 | Probable drug/metabolite-transporting permease Fjo20 | 3037 | 2647 |
THC0290_N_1223 | 3prime | 2125746:2125970 + | A1518 B521 C143 | 9.51 | 2.22 | new transcription segment | 3038 | 2748 | |
THC0290_N_1225 | 3prime | 2131021:2131131 - | A1518 B521 C143 | 8.61 | 2.17 | new transcription segment | 3043 | 2749 | |
THC0290_N_1226 | 3prime | 2137365:2137479 - |