Differential expression: Low temperature [Temp10C.vs.Ctrl]
Differentially expressed genes in cells grown at 10°C relative to 18°C (OD600nm=0.4, TYES at 200 rpm).
List of differentially expressed genomic elements (CDS and newly identified RNA elements).Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.
Reference samples: CS3_a, CS3_c
Test samples: Temp10C_a, Temp10C_c
Locus Tag | Name (v2) | Feature type | Location | Clusters | Base Expr. | Delta Expr. | Annotation | Chromosome order | Clusters order |
---|---|---|---|---|---|---|---|---|---|
THC0290_0901 | CDS | 1059740:1062964 + | A1198 B413 C124 | 6.23 | 1.26 | Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein | 1514 | 2245 |