Differential expression: Phase of growth [Trans.vs.Expo]
Differentially expressed genes in transition phase relative to exponential phase cells growing in TYES medium at 18°C 200 rpm.
List of differentially expressed genomic elements (CDS and newly identified RNA elements).Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.
Reference samples: T1_a, T1_c
Test samples: T3_a, T3_c
Locus Tag | Name (v2) | Feature type | Location | Clusters | Base Expr. | Delta Expr. | Annotation | Chromosome order | Clusters order |
---|---|---|---|---|---|---|---|---|---|
THC0290_0004 | folB | CDS | 4422:4781 - | A1762 B546 C143 | 10.13 | 1.43 | Dihydroneopterin aldolase | 8 | 3414 |
THC0290_N_0006 | Rfp1 | indep | 5284:5631 - | A1248 B419 C125 | 5.55 | 1.33 | new transcription segment | 10 | 2357 |
THC0290_0006 | CDS | 7285:7614 + | A1751 B546 C143 | 13.03 | 1.16 | Hypothetical protein precursor | 11 | 3336 | |
THC0290_0007 | CDS | 7614:7964 + | A1768 B546 C143 | 13.45 | 1.49 | Probable transmembrane protein of unknown function | 12 | 3719 | |
THC0290_0008 | CDS | 7968:8222 + | A1768 B546 C143 | 13.33 | 1.51 | Protein of unknown function | 13 | 3720 | |
THC0290_N_0008 | 3prime-PT | 8228:8499 + | A1768 B546 C143 | 6.72 | 1.83 | new transcription segment | 15 | 3687 | |
THC0290_N_0009 | intra | 9251:9388 - | A802 B244 C67 | 7.01 | -1.39 | new transcription segment | 17 | 1697 | |
THC0290_N_0010 | Rfp2 | indep | 10630:10929 + | A1248 B419 C125 | 5.40 | 1.35 | new transcription segment | 19 | 2358 |
THC0290_N_0013 | 3prime | 18031:18294 + | A646 B183 C44 | 10.24 | -1.08 | new transcription segment | 26 | 1409 | |
THC0290_N_0014 | 5prime | 18906:19034 + | A361 B138 C39 | 5.90 | -1.22 | new transcription segment | 28 | 462 | |
THC0290_N_0023 | 3prime | 32460:32570 + | A1747 B546 C143 | 6.02 | 1.14 | new transcription segment | 46 | 3264 | |
THC0290_0026 | sprF | CDS | 43183:44154 + | A242 B86 C26 | 13.16 | 1.33 | Putative cell surface protein precursor SprF | 49 | 316 |
THC0290_0029 | elaA | CDS | 47729:48178 + | A1768 B546 C143 | 9.39 | 1.34 | ElaA protein | 55 | 3677 |
THC0290_0039 | CDS | 62669:63382 - | A1799 B551 C143 | 9.93 | 1.17 | Protein of unknown function | 74 | 3886 | |
THC0290_N_0036 | 5prime | 63383:63435 - | A1798 B551 C143 | 10.04 | 1.42 | new transcription segment | 75 | 3885 | |
THC0290_0042 | hemB | CDS | 64879:65871 - | A588 B183 C44 | 10.71 | -1.15 | Porphobilinogen synthase | 80 | 930 |
THC0290_N_0045 | 3prime-PT | 78990:79546 + | A209 B77 C25 | 7.76 | 1.00 | new transcription segment | 102 | 268 | |
THC0290_0081 | mntH | CDS | 104165:106036 + | A1089 B366 C107 | 12.52 | 1.37 | Probable manganese transport protein mntH | 141 | 2108 |
THC0290_N_0062 | intra | 106037:106329 + | A1090 B366 C107 | 11.80 | 1.51 | new transcription segment | 142 | 2109 | |
THC0290_0082 | sirR | CDS | 106330:106983 + | A1072 B359 C105 | 11.68 | 1.18 | Probable metal-dependent transcriptional regulator | 143 | 2043 |
THC0290_N_0064 | 3prime | 108949:109046 + | A1800 B551 C143 | 11.00 | 1.95 | new transcription segment | 148 | 3887 | |
THC0290_0093 | feoA | CDS | 121549:121791 + | A1494 B512 C143 | 11.15 | 1.41 | Ferrous iron transport protein A | 163 | 2709 |
THC0290_0094 | feoB | CDS | 121791:123884 + | A1084 B365 C107 | 10.14 | 1.22 | Ferrous iron transport protein B | 164 | 2074 |
THC0290_N_0071 | intra | 123885:124433 + | A1084 B365 C107 | 9.71 | 1.05 | new transcription segment | 165 | 2075 | |
THC0290_0099 | CDS | 128701:129075 + | A422 B163 C44 | 12.31 | -1.01 | Protein of unknown function | 171 | 540 | |
THC0290_N_0074 | 3prime | 129899:129947 + | A1188 B407 C123 | 5.29 | -1.42 | new transcription segment | 174 | 2228 | |
THC0290_N_0075 | Rfp8 | indep | 129929:130108 - | A1768 B546 C143 | 6.35 | 1.97 | new transcription segment | 175 | 3608 |
THC0290_N_0079 | 3prime | 136118:136225 - | A1763 B546 C143 | 9.73 | 1.06 | new transcription segment | 185 | 3432 | |
THC0290_0110 | CDS | 140658:140933 - | A1768 B546 C143 | 11.02 | 1.11 | Putative plasmid stabilization system protein | 189 | 3633 | |
THC0290_0111 | CDS | 140930:141169 - | A1768 B546 C143 | 11.63 | 1.24 | Hypothetical protein | 190 | 3634 | |
THC0290_0116 | panC | CDS | 145223:146071 - | A605 B183 C44 | 10.81 | -1.42 | Pantoate--beta-alanine ligase | 195 | 1248 |
THC0290_0122 | atpD | CDS | 155419:156930 + | A600 B183 C44 | 14.14 | -1.09 | ATP synthase beta subunit | 204 | 1096 |
THC0290_N_0086 | intra | 156931:157009 + | A639 B183 C44 | 11.32 | -2.07 | new transcription segment | 205 | 1387 | |
THC0290_0123 | atpC | CDS | 157010:157291 + | A600 B183 C44 | 14.07 | -1.24 | ATP synthase epsilon subunit | 206 | 1097 |
THC0290_N_0088 | intra | 157872:157951 + | A72 B35 C14 | 8.52 | -1.13 | new transcription segment | 209 | 83 | |
THC0290_0129 | CDS | 159979:160953 + | A1248 B419 C125 | 11.80 | 1.12 | Putative outer membrane protein precursor | 215 | 2360 | |
THC0290_0131 | CDS | 162019:162429 - | A598 B183 C44 | 9.66 | -1.54 | Protein of unknown function | 219 | 989 | |
THC0290_N_0093 | 5prime | 163655:163724 - | A553 B182 C44 | 8.89 | -1.96 | new transcription segment | 223 | 798 | |
THC0290_0133 | CDS | 163777:164133 - | A304 B113 C32 | 8.87 | -1.53 | Protein of unknown function | 224 | 389 | |
THC0290_N_0094 | 5prime | 164134:164212 - | A305 B113 C32 | 7.89 | -1.26 | new transcription segment | 225 | 390 | |
THC0290_N_0095 | repeated_region | 164214:164791 - | A676 B189 C46 | 7.66 | -1.64 | new transcription segment | 226 | 1458 | |
THC0290_0136 | batD | CDS | 166703:168505 - | A677 B189 C46 | 10.58 | -1.24 | BatD protein | 231 | 1467 |
THC0290_N_0099 | intra | 171177:171320 - | A677 B189 C46 | 10.78 | -1.49 | new transcription segment | 235 | 1464 | |
THC0290_0139 | CDS | 171321:171701 - | A677 B189 C46 | 10.42 | -1.14 | Protein of unknown function | 236 | 1462 | |
THC0290_0140 | batA | CDS | 171756:172757 - | A677 B189 C46 | 10.79 | -1.44 | BatA protein | 238 | 1460 |
THC0290_0141 | CDS | 172759:174345 - | A677 B189 C46 | 10.72 | -1.32 | Probable transmembrane protein of unknown function | 239 | 1459 | |
THC0290_0142 | CDS | 176106:176972 - | A545 B180 C44 | 11.93 | -1.85 | Protein of unknown function | 241 | 770 | |
THC0290_N_0102 | intra | 176973:177041 - | A545 B180 C44 | 12.66 | -1.75 | new transcription segment | 242 | 771 | |
THC0290_0143 | CDS | 177042:178046 - | A853 B257 C70 | 12.10 | -1.65 | ATPase, MoxR family | 243 | 1774 | |
THC0290_N_0103 | 5prime | 178047:178088 - | A853 B257 C70 | 9.53 | -1.85 | new transcription segment | 244 | 1775 | |
THC0290_0144 | CDS | 178131:179366 + | A1107 B371 C109 | 9.31 | 1.49 | Protein of unknown function, putative transcriptional regulator | 245 | 2131 | |
THC0290_0147 | phnA | CDS | 180747:181328 + | A515 B180 C44 | 10.76 | -1.08 | PhnA protein | 249 | 687 |
THC0290_N_0107 | Rfp11 | indep | 182563:182671 + | A1768 B546 C143 | 4.86 | 1.85 | new transcription segment | 253 | 3598 |
THC0290_N_0108 | 3prime | 182582:182666 - | A793 B241 C67 | 4.88 | -1.24 | new transcription segment | 254 | 1682 | |
THC0290_tRNA_0003 | tRNA | 191432:191514 + | A1769 B546 C143 | 12.42 | 2.62 | transfer RNA-Leu | 265 | 3761 | |
THC0290_0157 | CDS | 194650:195750 + | A1765 B546 C143 | 8.64 | 1.03 | Probable transmembrane protein of unknown function | 272 | 3507 | |
THC0290_N_0126 | intra | 202620:202692 - | A611 B183 C44 | 10.25 | -1.04 | new transcription segment | 280 | 1291 | |
THC0290_N_0129 | Rfp13 | indep | 208062:208134 - | A1769 B546 C143 | 12.32 | 5.68 | new transcription segment | 287 | 3741 |
THC0290_N_0130 | Rfp14 | indep | 208381:208488 + | A1765 B546 C143 | 8.31 | 1.00 | new transcription segment | 288 | 3520 |
THC0290_N_0132 | 3prime | 210722:211077 - | A576 B183 C44 | 8.86 | -1.06 | new transcription segment | 292 | 855 | |
THC0290_0169 | CDS | 212865:213590 - | A544 B180 C44 | 11.01 | -1.24 | Glycosyl transferase, group 2 family protein | 296 | 766 | |
THC0290_0172 | CDS | 216630:217619 - | A1083 B365 C107 | 14.50 | 1.14 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 300 | 2071 | |
THC0290_0178 | CDS | 224965:225888 - | A1083 B365 C107 | 14.24 | 1.15 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 308 | 2067 | |
THC0290_0182 | CDS | 230123:231112 - | A1083 B365 C107 | 13.02 | 4.09 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 313 | 2056 | |
THC0290_0183 | CDS | 231127:232047 - | A1083 B365 C107 | 14.12 | 2.73 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 314 | 2057 | |
THC0290_0184 | CDS | 232062:233117 - | A1083 B365 C107 | 12.98 | 3.18 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 315 | 2058 | |
THC0290_0185 | CDS | 233132:234121 - | A1088 B365 C107 | 11.76 | 6.23 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 316 | 2088 | |
THC0290_0186 | CDS | 234136:235122 - | A1088 B365 C107 | 12.66 | 3.75 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 317 | 2085 | |
THC0290_0188 | CDS | 236394:237143 + | A540 B180 C44 | 12.19 | -2.15 | Protein of unknown function | 319 | 750 | |
THC0290_N_0144 | intra | 237144:237208 + | A586 B183 C44 | 11.19 | -1.86 | new transcription segment | 320 | 914 | |
THC0290_0189 | CDS | 237209:237979 + | A587 B183 C44 | 9.87 | -1.88 | Enoyl-CoA hydratase/isomerase family protein | 321 | 917 | |
THC0290_N_0146 | 3prime | 237980:238652 + | A576 B183 C44 | 7.69 | -1.80 | new transcription segment | 323 | 858 | |
THC0290_0200 | CDS | 250231:250752 + | A1715 B546 C143 | 11.13 | 1.28 | Hypothetical protein | 340 | 3158 | |
THC0290_0201 | CDS | 250719:251186 - | A1765 B546 C143 | 8.97 | 1.29 | Adenylate cyclase family protein | 341 | 3466 | |
THC0290_N_0155 | 5prime | 251187:251301 - | A1768 B546 C143 | 9.07 | 1.66 | new transcription segment | 343 | 3653 | |
THC0290_N_0159 | intra | 254489:254544 - | A601 B183 C44 | 8.62 | -1.90 | new transcription segment | 349 | 1119 | |
THC0290_0204 | rnhA | CDS | 254545:255024 - | A601 B183 C44 | 8.67 | -2.15 | Ribonuclease HI | 350 | 1182 |
THC0290_0205 | purN | CDS | 255026:255595 - | A526 B180 C44 | 8.95 | -1.74 | Phosphoribosylglycinamide formyltransferase | 351 | 711 |
THC0290_0208 | rnc | CDS | 257618:258358 + | A600 B183 C44 | 10.39 | -1.29 | Ribonuclease III | 357 | 1113 |
THC0290_N_0164 | intra | 258359:258452 + | A601 B183 C44 | 10.11 | -1.25 | new transcription segment | 358 | 1120 | |
THC0290_N_0167 | intra | 261251:261325 - | A50 B27 C13 | 8.82 | -1.92 | new transcription segment | 363 | 57 | |
THC0290_0212 | CDS | 261326:261682 - | A609 B183 C44 | 8.56 | -2.17 | Protein of unknown function MmcQ | 364 | 1271 | |
THC0290_0213 | CDS | 261688:262440 - | A609 B183 C44 | 9.12 | -1.99 | Probable arylformamidase | 365 | 1281 | |
THC0290_0214 | CDS | 262521:263654 - | A609 B183 C44 | 8.68 | -2.42 | Probable coproporphyrinogen oxidase | 366 | 1280 | |
THC0290_0216 | CDS | 264266:265192 + | A549 B181 C44 | 7.17 | -1.02 | Probable transmembrane protein of unknown function | 369 | 791 | |
THC0290_0217 | CDS | 265180:266289 + | A549 B181 C44 | 7.28 | -1.05 | Glycosyl transferase, group 2 family protein | 370 | 792 | |
THC0290_0220 | CDS | 267649:268050 - | A1790 B549 C143 | 9.96 | 1.30 | Hypothetical protein | 376 | 3842 | |
THC0290_N_0171 | intra | 268051:268199 - | A1790 B549 C143 | 11.40 | 1.52 | new transcription segment | 377 | 3845 | |
THC0290_0221 | CDS | 268200:268898 - | A1790 B549 C143 | 11.70 | 1.47 | Protein of unknown function precursor | 378 | 3844 | |
THC0290_0222 | CDS | 268913:269659 - | A1762 B546 C143 | 10.76 | 1.69 | Protein of unknown function precursor | 379 | 3403 | |
THC0290_0223 | ileS | CDS | 269844:273245 + | A544 B180 C44 | 11.10 | -2.74 | Isoleucine--tRNA ligase | 380 | 767 |
THC0290_0224 | dksA | CDS | 273252:273632 + | A856 B258 C70 | 11.89 | -1.86 | DnaK suppressor protein | 381 | 1779 |
THC0290_N_0172 | 5prime | 273673:273853 + | A834 B252 C69 | 6.64 | -1.56 | new transcription segment | 382 | 1741 | |
THC0290_N_0173 | 3prime | 274351:274462 - | A1313 B452 C133 | 5.99 | 1.01 | new transcription segment | 384 | 2455 | |
THC0290_N_0178 | intra | 284615:284739 + | A1125 B375 C109 | 13.27 | 1.59 | new transcription segment | 397 | 2156 | |
THC0290_0237 | fpp1 | CDS | 288547:291963 - | A1062 B352 C104 | 10.08 | 4.18 | Psychrophilic metalloprotease Fpp1 precursor | 403 | 2030 |
THC0290_N_0181 | 3prime | 292028:292069 - | A1100 B369 C108 | 4.71 | 1.64 | new transcription segment | 404 | 2121 | |
THC0290_0238 | fpp2 | CDS | 292070:294898 - | A1062 B352 C104 | 12.51 | 1.88 | Psychrophilic metalloprotease Fpp2 precursor | 405 | 2031 |
THC0290_0240 | bioB | CDS | 296279:297367 + | A600 B183 C44 | 11.74 | -1.43 | Biotin synthase | 408 | 1050 |
THC0290_0241 | CDS | 297417:297623 - | A1450 B502 C142 | 12.16 | 1.03 | Biotin synthase | 409 | 2641 | |
THC0290_N_0185 | 5prime | 297877:297936 - | A1769 B546 C143 | 9.77 | 2.38 | new transcription segment | 412 | 3751 | |
THC0290_0242 | CDS | 297963:298367 - | A1768 B546 C143 | 10.14 | 2.07 | Probable lyase | 413 | 3625 | |
THC0290_N_0189 | intra | 304144:304193 - | A678 B190 C47 | 8.92 | 1.16 | new transcription segment | 425 | 1469 | |
THC0290_N_0194 | 5prime | 311635:311701 - | A719 B205 C53 | 8.03 | -1.56 | new transcription segment | 435 | 1567 | |
THC0290_0256 | aspC3 | CDS | 311724:312935 - | A719 B205 C53 | 8.17 | -1.68 | Probable aspartate transaminase AspC3 | 436 | 1568 |
THC0290_0257 | pheA | CDS | 312932:313768 - | A719 B205 C53 | 8.04 | -1.20 | Prephenate dehydratase | 437 | 1569 |
THC0290_N_0196 | intra | 315768:315824 + | A292 B108 C30 | 7.47 | -1.01 | new transcription segment | 441 | 377 | |
THC0290_0261 | CDS | 317564:318664 - | A726 B207 C54 | 6.09 | -1.38 | Homoserine dehydrogenase | 445 | 1583 | |
THC0290_0262 | metX | CDS | 318651:319652 - | A726 B207 C54 | 5.86 | -1.77 | Homoserine O-acetyltransferase | 446 | 1584 |
THC0290_0263 | metY | CDS | 319731:321023 - | A726 B207 C54 | 6.20 | -1.74 | Probable O-acetylhomoserine aminocarboxypropyltransferase | 447 | 1585 |
THC0290_0272 | CDS | 329944:330672 + | A1396 B479 C139 | 6.63 | -1.04 | Hypothetical protein | 461 | 2570 | |
THC0290_0275 | CDS | 332899:333825 - | A1862 B574 C149 | 11.42 | 1.15 | Protein of unknown function | 466 | 3961 | |
THC0290_0276 | CDS | 334046:334363 - | A1709 B546 C143 | 13.55 | 1.04 | Thioredoxin family protein | 468 | 3133 | |
THC0290_N_0208 | 3prime | 335720:335801 - | A329 B122 C33 | 12.13 | -1.07 | new transcription segment | 471 | 417 | |
THC0290_0284 | CDS | 338926:340089 + | A1663 B542 C143 | 14.86 | 1.27 | Transposase IS4 family | 478 | 3041 | |
THC0290_0286 | CDS | 340851:343562 + | A312 B118 C33 | 5.75 | -1.10 | Protein of unknown function precursor | 481 | 397 | |
THC0290_0287 | metK | CDS | 343737:344987 - | A854 B257 C70 | 12.02 | -1.95 | Methionine adenosyltransferase | 484 | 1776 |
THC0290_N_0210 | 5prime | 344988:345117 - | A855 B257 C70 | 11.35 | -1.63 | new transcription segment | 485 | 1778 | |
THC0290_miscRNA_0001 | misc_RNA | 345053:345113 - | A855 B257 C70 | 11.37 | -1.84 | SAM-II long loop | 486 | 1777 | |
THC0290_N_0214 | 3prime | 351138:351301 + | A1655 B542 C143 | 11.39 | 1.41 | new transcription segment | 492 | 3025 | |
THC0290_0294 | aspS | CDS | 353314:355065 + | A605 B183 C44 | 11.82 | -1.61 | Aspartate--tRNA ligase | 495 | 1250 |
THC0290_N_0217 | 3prime | 355417:355516 - | A1643 B540 C143 | 9.04 | 1.29 | new transcription segment | 498 | 2985 | |
THC0290_0296 | CDS | 355517:355957 - | A1768 B546 C143 | 9.83 | 1.36 | Probable cytosine/adenosine deaminase | 499 | 3623 | |
THC0290_0300 | CDS | 361814:364573 - | A1062 B352 C104 | 11.27 | 1.25 | Probable M36 fungalysin family metalloprotease precursor | 505 | 2029 | |
THC0290_0306 | CDS | 372055:372684 - | A1049 B346 C102 | 9.79 | 1.09 | Probable polysaccharide deacetylase | 513 | 2014 | |
THC0290_0307 | CDS | 372841:373998 - | A208 B77 C25 | 10.47 | 1.53 | Probable ABC-type transport system, permease component | 514 | 267 | |
THC0290_0308 | CDS | 373995:374993 - | A1099 B369 C108 | 11.19 | 1.45 | Probable ABC-type transport system, membrane fusion efflux lipoprotein precursor component | 515 | 2120 | |
THC0290_0309 | CDS | 375002:376381 - | A1760 B546 C143 | 10.90 | 1.52 | Probable outer membrane efflux protein precursor | 516 | 3373 | |
THC0290_0310 | CDS | 376525:379755 - | A939 B296 C82 | 12.12 | 1.24 | Probable transmembrane protein of unknown function | 518 | 1876 | |
THC0290_0312 | yggG | CDS | 381240:382067 + | A1762 B546 C143 | 13.41 | 1.20 | Putative secreted M48 family metalloprotease YggG precursor | 523 | 3398 |
THC0290_0314 | lysC | CDS | 382824:384077 + | A1118 B373 C109 | 12.46 | 1.04 | Aspartate kinase | 526 | 2148 |
THC0290_0316 | CDS | 387602:388201 + | A1040 B344 C102 | 13.79 | 2.38 | Hypothetical protein precursor | 528 | 2001 | |
THC0290_N_0230 | intra | 388202:388287 + | A1040 B344 C102 | 13.18 | 2.76 | new transcription segment | 529 | 2002 | |
THC0290_N_0235 | 3prime | 393012:393683 - | A127 B53 C18 | 7.29 | -1.02 | new transcription segment | 538 | 160 | |
THC0290_N_0243 | 5prime | 400566:400739 + | A1763 B546 C143 | 8.57 | 1.04 | new transcription segment | 554 | 3445 | |
THC0290_N_0248 | Rfp25 | indep | 418605:418919 + | A1760 B546 C143 | 10.86 | 4.08 | new transcription segment | 566 | 3379 |
THC0290_0343 | gene | 420014:422260 - | A373 B141 C39 | 7.34 | -1.08 | Protein of unknown function precursor (fragment) | 570 | 477 | |
THC0290_0350 | ppa | CDS | 430070:430600 + | A600 B183 C44 | 13.03 | -1.25 | Inorganic diphosphatase | 584 | 1090 |
THC0290_0357 | rimM | CDS | 440423:440947 + | A600 B183 C44 | 11.60 | -1.79 | 16S rRNA processing protein RimM | 595 | 1111 |
THC0290_N_0262 | intra | 440948:441076 + | A600 B183 C44 | 10.77 | -2.04 | new transcription segment | 596 | 1112 | |
THC0290_0358 | yfiC | CDS | 441077:441781 + | A600 B183 C44 | 9.49 | -2.43 | Protein of unknown function YfiC | 597 | 1057 |
THC0290_N_0263 | 3prime-PT | 441466:441936 - | A1760 B546 C143 | 8.50 | 2.11 | new transcription segment | 598 | 3375 | |
THC0290_0360 | gmk | CDS | 443282:443857 - | A596 B183 C44 | 10.39 | -1.14 | Guanylate kinase | 602 | 983 |
THC0290_N_0267 | 5prime | 446871:447017 + | A1762 B546 C143 | 10.38 | 1.82 | new transcription segment | 607 | 3396 | |
THC0290_0365 | CDS | 447018:447473 + | A1762 B546 C143 | 10.27 | 1.21 | Protein of unknown function | 608 | 3385 | |
THC0290_N_0268 | intra | 447474:447645 + | A1762 B546 C143 | 10.68 | 1.23 | new transcription segment | 609 | 3386 | |
THC0290_N_0269 | 3prime-PT | 448689:448837 - | A1795 B549 C143 | 6.55 | 2.33 | new transcription segment | 612 | 3859 | |
THC0290_N_0271 | 3prime | 448838:448909 - | A1795 B549 C143 | 7.51 | 3.44 | new transcription segment | 614 | 3861 | |
THC0290_0367 | CDS | 448910:449260 - | A1795 B549 C143 | 10.13 | 3.17 | Protein of unknown function precursor | 616 | 3860 | |
THC0290_0368 | CDS | 449469:450680 - | A1670 B542 C143 | 8.46 | 1.31 | Probable lipoprotein precursor | 617 | 3060 | |
THC0290_0369 | CDS | 450870:453704 - | A1670 B542 C143 | 7.76 | 1.43 | Probable TonB-dependent outer membrane receptor precursor | 618 | 3061 | |
THC0290_0372 | oprP | CDS | 455757:457094 + | A1492 B512 C143 | 10.87 | 3.22 | Probable phosphate-selective porin precursor | 621 | 2706 |
THC0290_0373 | pstS | CDS | 457114:457947 + | A1492 B512 C143 | 11.74 | 3.73 | ABC-type phosphate-transport system, binding protein precursor component PstS | 622 | 2707 |
THC0290_N_0274 | intra | 457948:458037 + | A1492 B512 C143 | 8.65 | 3.33 | new transcription segment | 623 | 2705 | |
THC0290_0374 | pstC | CDS | 458038:459189 + | A1492 B512 C143 | 11.19 | 3.71 | ABC-type phosphate-transport system, permease component PstC | 624 | 2701 |
THC0290_0375 | pstA | CDS | 459193:460137 + | A1492 B512 C143 | 10.77 | 3.19 | ABC-type phosphate-transport system, permease component PstA | 625 | 2702 |
THC0290_0376 | pstB | CDS | 460164:460922 + | A1492 B512 C143 | 11.19 | 2.81 | ABC-type phosphate-transport system, ATPase component PstB | 626 | 2703 |
THC0290_0377 | phoU | CDS | 460961:461689 + | A1492 B512 C143 | 11.23 | 2.93 | Phosphate transport system protein PhoU | 627 | 2704 |
THC0290_0379 | CDS | 462838:463659 - | A1670 B542 C143 | 7.36 | 1.96 | Protein of unknown function | 629 | 3062 | |
THC0290_0381 | CDS | 464505:465146 + | A861 B260 C70 | 9.79 | -1.03 | Probable transmembrane protein of unknown function. Putative amino-acid efflux protein | 632 | 1785 | |
THC0290_0385 | actB | CDS | 467677:470706 + | A601 B183 C44 | 13.63 | -1.35 | Alternative complex III, protein B precursor | 640 | 1191 |
THC0290_N_0280 | intra | 470707:470799 + | A424 B163 C44 | 11.38 | -1.44 | new transcription segment | 641 | 545 | |
THC0290_0386 | actC | CDS | 470800:472206 + | A601 B183 C44 | 13.73 | -1.06 | Alternative complex III, protein C | 642 | 1196 |
THC0290_0387 | actD | CDS | 472213:472737 + | A601 B183 C44 | 13.78 | -1.07 | Alternative complex III, protein D | 643 | 1197 |
THC0290_0388 | actE | CDS | 472746:473291 + | A601 B183 C44 | 13.80 | -1.17 | Alternative complex III, protein E precursor | 644 | 1195 |
THC0290_0389 | actF | CDS | 473317:474762 + | A601 B183 C44 | 13.66 | -1.23 | Alternative complex III, protein F | 645 | 1193 |
THC0290_0390 | ctaC | CDS | 474781:475953 + | A601 B183 C44 | 13.71 | -1.12 | Cytochrome c oxidase, subunit II | 646 | 1194 |
THC0290_0394 | CDS | 479629:481770 + | A605 B183 C44 | 10.89 | -1.14 | Protein of unknown function precursor, putative S46 family serine protease | 652 | 1216 | |
THC0290_0396 | CDS | 482475:482840 - | A1161 B397 C120 | 6.12 | -1.94 | Protein of unknown function | 657 | 2196 | |
THC0290_0398 | CDS | 486474:486992 + | A1618 B535 C143 | 14.93 | 1.42 | Protein of unknown function precursor | 661 | 2924 | |
THC0290_N_0298 | 3prime-PT | 500352:500565 - | A1760 B546 C143 | 8.03 | 2.47 | new transcription segment | 682 | 3376 | |
THC0290_N_0301 | intra | 500882:501008 - | A609 B183 C44 | 11.05 | -1.45 | new transcription segment | 685 | 1279 | |
THC0290_0410 | fabD | CDS | 501009:501881 - | A609 B183 C44 | 10.79 | -1.73 | Malonyl CoA-acyl carrier protein transacylase | 686 | 1282 |
THC0290_N_0303 | intra | 501925:502073 - | A587 B183 C44 | 8.34 | -1.25 | new transcription segment | 687 | 920 | |
THC0290_0416 | gidB | CDS | 506352:506981 + | A1760 B546 C143 | 9.97 | 1.07 | Methyltransferase GidB | 695 | 3370 |
THC0290_N_0304 | 3prime | 506982:507043 + | A1552 B523 C143 | 5.95 | 1.45 | new transcription segment | 696 | 2806 | |
THC0290_0418 | apaG | CDS | 509450:509836 - | A1702 B546 C143 | 12.61 | 1.26 | Protein ApaG | 700 | 3120 |
THC0290_0429 | CDS | 521589:522020 + | A1509 B519 C143 | 8.92 | 1.73 | Hypothetical transmembrane protein | 712 | 2728 | |
THC0290_N_0309 | 3prime | 522021:522213 + | A1509 B519 C143 | 9.98 | 2.67 | new transcription segment | 713 | 2729 | |
THC0290_N_0310 | 3prime-PT | 522214:522414 + | A771 B233 C66 | 8.64 | 1.24 | new transcription segment | 714 | 1656 | |
THC0290_0430 | CDS | 522415:524397 + | A1765 B546 C143 | 10.35 | 1.63 | Cation-transporting ATPase, P-type | 715 | 3539 | |
THC0290_N_0311 | intra | 524398:524889 + | A1765 B546 C143 | 8.12 | 1.48 | new transcription segment | 716 | 3534 | |
THC0290_miscRNA_0002 | misc_RNA | 524890:524985 + | A1765 B546 C143 | 9.79 | 1.63 | TPP riboswitch [THI element] | 717 | 3484 | |
THC0290_N_0312 | intra | 524986:525051 + | A729 B209 C54 | 9.55 | 1.42 | new transcription segment | 718 | 1595 | |
THC0290_N_0322 | 3prime | 539143:539314 - | A1872 B578 C149 | 8.71 | 1.66 | new transcription segment | 740 | 3974 | |
THC0290_0447 | CDS | 542738:543226 - | A1122 B375 C109 | 10.79 | 1.35 | Acetyltransferase, GNAT family | 744 | 2152 | |
THC0290_0451 | ilvH | CDS | 546976:547506 - | A1197 B412 C124 | 6.36 | -1.31 | Acetolactate synthase, small subunit | 748 | 2239 |
THC0290_0452 | ilvB | CDS | 547513:549207 - | A1197 B412 C124 | 5.93 | -1.59 | Acetolactate synthase, large subunit | 749 | 2242 |
THC0290_0453 | ilvD | CDS | 549225:550901 - | A1197 B412 C124 | 6.28 | -1.08 | Dihydroxy-acid dehydratase | 750 | 2240 |
THC0290_0454 | ilvE | CDS | 550915:551790 - | A1196 B412 C124 | 5.49 | -1.30 | Branched-chain-amino-acid transaminase | 751 | 2237 |
THC0290_N_0328 | 3prime-PT | 553432:553812 + | A87 B41 C15 | 8.37 | 1.64 | new transcription segment | 756 | 103 | |
THC0290_0457 | tsf | CDS | 554438:555262 - | A599 B183 C44 | 13.36 | -2.20 | Elongation factor Ts (EF-Ts) | 758 | 1008 |
THC0290_N_0331 | intra | 555263:555363 - | A599 B183 C44 | 12.69 | -2.59 | new transcription segment | 759 | 1009 | |
THC0290_0458 | rpsB | CDS | 555364:556164 - | A638 B183 C44 | 14.21 | -1.52 | 30S ribosomal protein S2 | 760 | 1381 |
THC0290_N_0332 | intra | 556165:556317 - | A638 B183 C44 | 14.86 | -1.52 | new transcription segment | 761 | 1382 | |
THC0290_0459 | rpsI | CDS | 556318:556704 - | A638 B183 C44 | 14.72 | -1.14 | 30S ribosomal protein S9 | 762 | 1380 |
THC0290_0460 | rplM | CDS | 556704:557159 - | A886 B275 C75 | 14.46 | -1.14 | 50S ribosomal protein L13 | 763 | 1812 |
THC0290_0467 | CDS | 564213:565787 - | A522 B180 C44 | 8.77 | -1.11 | Probable membrane associated S41A family C-terminal processing peptidase | 776 | 700 | |
THC0290_0468 | CDS | 565861:566289 - | A432 B164 C44 | 9.89 | -1.24 | dCMP deaminase | 778 | 556 | |
THC0290_N_0339 | 3prime-PT | 567081:567646 - | A1760 B546 C143 | 6.58 | 3.09 | new transcription segment | 782 | 3374 | |
THC0290_0471 | uspA | CDS | 567685:568509 - | A1042 B344 C102 | 14.33 | 1.78 | Universal stress protein UspA | 784 | 2005 |
THC0290_N_0342 | 5prime | 568510:568559 - | A1042 B344 C102 | 13.22 | 1.65 | new transcription segment | 785 | 2006 | |
THC0290_N_0343 | 5prime | 568633:568691 + | A962 B306 C84 | 5.70 | -1.35 | new transcription segment | 786 | 1904 | |
THC0290_0472 | CDS | 568692:569156 + | A784 B238 C67 | 12.21 | -1.57 | Protein of unknown function | 787 | 1670 | |
THC0290_0473 | nusA | CDS | 569172:570413 + | A639 B183 C44 | 12.79 | -1.52 | Transcription elongation protein NusA | 788 | 1390 |
THC0290_N_0344 | intra | 570414:570466 + | A639 B183 C44 | 13.75 | -1.59 | new transcription segment | 789 | 1391 | |
THC0290_0474 | infB | CDS | 570467:573370 + | A599 B183 C44 | 12.69 | -1.47 | Translation initiation factor IF-2 | 790 | 1001 |
THC0290_N_0347 | intra | 579956:580112 + | A637 B183 C44 | 14.31 | -1.24 | new transcription segment | 797 | 1375 | |
THC0290_0475 | gene | 580335:580526 - | A1765 B546 C143 | 8.10 | 1.48 | Transposase (fragment) | 799 | 3490 | |
THC0290_N_0348 | 5prime | 580527:580629 - | A1765 B546 C143 | 8.68 | 2.21 | new transcription segment | 800 | 3458 | |
THC0290_0478 | CDS | 582060:583262 + | A331 B122 C33 | 11.00 | -1.04 | Transposase IS256 family | 803 | 421 | |
THC0290_0486 | CDS | 591334:592536 - | A331 B122 C33 | 10.99 | -1.13 | Transposase IS256 family | 816 | 424 | |
THC0290_0487 | CDS | 592935:594287 + | A841 B255 C69 | 11.53 | -1.39 | Protein of unknown function | 817 | 1757 | |
THC0290_0488 | CDS | 594274:594957 + | A841 B255 C69 | 10.62 | -1.19 | Protein of unknown function | 818 | 1758 | |
THC0290_N_0355 | intra | 594958:595161 + | A866 B262 C70 | 9.65 | -1.04 | new transcription segment | 819 | 1790 | |
THC0290_0489 | CDS | 595162:596364 + | A331 B122 C33 | 10.94 | -1.07 | Transposase IS256 family | 820 | 422 | |
THC0290_0498 | CDS | 603925:604707 - | A1092 B367 C107 | 8.11 | 1.13 | Hypothetical lipoprotein precursor | 833 | 2112 | |
THC0290_N_0360 | 3prime-PT | 604737:605191 - | A1093 B367 C107 | 9.19 | 1.12 | new transcription segment | 834 | 2114 | |
THC0290_0501 | CDS | 607701:608105 - | A1756 B546 C143 | 10.26 | 1.33 | Hypothetical lipoprotein precursor | 837 | 3359 | |
THC0290_0502 | CDS | 608390:609994 + | A1765 B546 C143 | 7.68 | 1.11 | Transposase IS1182 family | 839 | 3528 | |
THC0290_N_0363 | repeated_region | 609996:610101 - | A1765 B546 C143 | 10.62 | 1.36 | new transcription segment | 840 | 3535 | |
THC0290_0503 | CDS | 610102:610602 - | A1765 B546 C143 | 9.65 | 1.59 | Protein of unknown function precursor | 841 | 3544 | |
THC0290_N_0364 | 5prime | 610603:610665 - | A1764 B546 C143 | 10.47 | 2.22 | new transcription segment | 842 | 3452 | |
THC0290_0504 | CDS | 611442:612659 + | A1765 B546 C143 | 8.58 | 1.21 | Probable transposase | 843 | 3543 | |
THC0290_N_0365 | 5prime | 612761:612929 + | A1762 B546 C143 | 9.70 | 2.16 | new transcription segment | 844 | 3416 | |
THC0290_0505 | CDS | 612930:613817 + | A1593 B534 C143 | 8.01 | 1.20 | Protein of unknown function | 845 | 2867 | |
THC0290_N_0366 | intra | 613818:613961 + | A1818 B557 C145 | 7.06 | 2.22 | new transcription segment | 846 | 3909 | |
THC0290_0506 | CDS | 613962:614243 + | A1415 B488 C140 | 5.98 | 2.13 | Protein of unknown function | 847 | 2590 | |
THC0290_0507 | gene | 614341:614829 + | A1415 B488 C140 | 4.85 | 1.47 | Truncated protein of unknown function, N-terminal region | 848 | 2591 | |
THC0290_N_0367 | repeated_region | 614486:614829 - | A1768 B546 C143 | 4.85 | 1.55 | new transcription segment | 849 | 3600 | |
THC0290_0517 | CDS | 634225:634386 - | A1765 B546 C143 | 7.97 | 1.50 | Hypothetical protein | 864 | 3514 | |
THC0290_N_0373 | intra | 634387:634452 - | A1765 B546 C143 | 10.86 | 1.68 | new transcription segment | 865 | 3513 | |
THC0290_0518 | CDS | 634453:634626 - | A1765 B546 C143 | 10.58 | 1.44 | Conserved protein of unknown function | 866 | 3512 | |
THC0290_N_0374 | intra | 634627:634806 - | A1765 B546 C143 | 9.41 | 1.66 | new transcription segment | 867 | 3511 | |
THC0290_N_0376 | 3prime | 640464:640566 - | A1765 B546 C143 | 11.74 | 1.21 | new transcription segment | 875 | 3536 | |
THC0290_0525 | CDS | 640567:641241 - | A1765 B546 C143 | 11.50 | 1.54 | Hypothetical protein | 876 | 3554 | |
THC0290_0526 | CDS | 642217:643776 + | A1765 B546 C143 | 7.39 | 1.14 | Transposase IS1182 family | 878 | 3529 | |
THC0290_0527 | CDS | 643868:645070 + | A331 B122 C33 | 10.99 | -1.10 | Transposase IS256 family | 879 | 425 | |
THC0290_N_0384 | repeated_region | 651641:651988 - | A1765 B546 C143 | 10.48 | 1.21 | new transcription segment | 893 | 3459 | |
THC0290_N_0385 | repeated_region | 653491:653740 - | A1765 B546 C143 | 10.96 | 1.47 | new transcription segment | 896 | 3462 | |
THC0290_0540 | CDS | 656981:657529 - | A1760 B546 C143 | 11.62 | 1.28 | Hypothetical protein | 903 | 3377 | |
THC0290_N_0390 | Rfp30 | indep | 658610:658815 + | A1762 B546 C143 | 9.44 | 2.71 | new transcription segment | 906 | 3412 |
THC0290_N_0393 | repeated_region | 661643:662054 - | A1766 B546 C143 | 11.19 | 1.21 | new transcription segment | 911 | 3563 | |
THC0290_N_0396 | intra | 668261:668748 - | A1765 B546 C143 | 7.37 | 1.65 | new transcription segment | 921 | 3545 | |
THC0290_0550 | CDS | 668749:669369 - | A1765 B546 C143 | 9.35 | 1.35 | Protein of unknown function | 922 | 3546 | |
THC0290_N_0398 | 5prime | 673140:674020 - | A1765 B546 C143 | 9.48 | 1.09 | new transcription segment | 925 | 3547 | |
THC0290_N_0399 | repeated_region | 675385:675715 - | A1765 B546 C143 | 10.41 | 1.09 | new transcription segment | 928 | 3460 | |
THC0290_0554 | CDS | 675716:676768 - | A852 B256 C70 | 7.85 | -1.05 | Hypothetical protein precursor | 929 | 1772 | |
THC0290_N_0400 | repeated_region | 676790:676957 - | A850 B256 C70 | 8.00 | -1.08 | new transcription segment | 930 | 1770 | |
THC0290_N_0401 | repeated_region | 679945:680245 - | A1765 B546 C143 | 10.47 | 1.17 | new transcription segment | 934 | 3461 | |
THC0290_N_0405 | intra | 686402:686639 - | A54 B29 C13 | 7.67 | -1.10 | new transcription segment | 944 | 62 | |
THC0290_N_0407 | repeated_region | 687604:688071 + | A1768 B546 C143 | 5.04 | 2.01 | new transcription segment | 947 | 3731 | |
THC0290_N_0408 | repeated_region | 689263:689589 - | A1765 B546 C143 | 10.77 | 1.00 | new transcription segment | 949 | 3463 | |
THC0290_N_0410 | repeated_region | 693406:693624 - | A842 B255 C69 | 10.61 | -1.35 | new transcription segment | 954 | 1760 | |
THC0290_0569 | CDS | 693625:694329 - | A842 B255 C69 | 10.67 | -1.18 | Protein of unknown function | 955 | 1759 | |
THC0290_0571 | CDS | 696067:696396 - | A1580 B530 C143 | 12.80 | 1.03 | Hypothetical protein | 958 | 2851 | |
THC0290_N_0413 | intra | 696660:696739 - | A1732 B546 C143 | 7.89 | -1.15 | new transcription segment | 960 | 3202 | |
THC0290_0572 | CDS | 696740:697474 - | A1200 B413 C124 | 7.12 | -1.62 | Hypothetical lipoprotein precursor | 961 | 2252 | |
THC0290_0573 | CDS | 697763:698500 - | A1200 B413 C124 | 7.83 | -1.82 | Hypothetical protein | 963 | 2253 | |
THC0290_0575 | CDS | 700331:701341 - | A1201 B413 C124 | 9.32 | -1.41 | Transposase IS3 family | 967 | 2254 | |
THC0290_0581 | CDS | 707782:708492 + | A1765 B546 C143 | 9.54 | 1.70 | Protein of unknown function | 979 | 3501 | |
THC0290_N_0423 | 3prime | 708013:708480 - | A1222 B417 C125 | 6.69 | 1.36 | new transcription segment | 980 | 2290 | |
THC0290_0582 | CDS | 708481:710181 - | A1103 B371 C109 | 9.92 | 1.92 | Protein of unknown function containing peptidoglycan binding domain | 981 | 2127 | |
THC0290_N_0424 | 3prime | 708493:708688 + | A1645 B540 C143 | 8.02 | 1.20 | new transcription segment | 982 | 2997 | |
THC0290_0583 | yitI | CDS | 710191:710622 - | A1243 B419 C125 | 9.38 | 1.63 | Acetyltransferase, GNAT family, YitI | 984 | 2327 |
THC0290_N_0426 | 3prime-PT | 710623:710986 - | A1037 B342 C102 | 7.13 | 3.06 | new transcription segment | 985 | 1997 | |
THC0290_0584 | pepE | CDS | 711012:711719 - | A1035 B342 C102 | 10.53 | 1.61 | Dipeptidase E | 988 | 1990 |
THC0290_0585 | CDS | 711836:712555 + | A1348 B467 C136 | 7.54 | -1.42 | Protein of unknown function precursor | 989 | 2501 | |
THC0290_0588 | CDS | 715514:716959 - | A552 B181 C44 | 9.31 | -1.48 | Probable amino acid-transporting permease | 993 | 796 | |
THC0290_0590 | CDS | 718261:719187 + | A576 B183 C44 | 7.39 | -1.56 | Putative 4Fe-4S binding protein | 996 | 854 | |
THC0290_0594 | CDS | 729775:729990 + | A599 B183 C44 | 10.13 | -1.63 | Conserved protein of unknown function | 1002 | 1021 | |
THC0290_N_0434 | 3prime | 729991:730208 + | A601 B183 C44 | 11.38 | -1.40 | new transcription segment | 1003 | 1129 | |
THC0290_N_0435 | intra | 730209:730951 + | A318 B119 C33 | 10.53 | -1.80 | new transcription segment | 1004 | 404 | |
THC0290_0597 | deoC | CDS | 731804:732547 + | A600 B183 C44 | 10.32 | -1.23 | Deoxyribose-phosphate aldolase | 1008 | 1051 |
THC0290_N_0444 | 3prime | 745438:745510 - | A1762 B546 C143 | 13.97 | 2.71 | new transcription segment | 1028 | 3393 | |
THC0290_0611 | CDS | 745511:745864 - | A1762 B546 C143 | 12.63 | 2.53 | Protein of unknown function | 1029 | 3392 | |
THC0290_0618 | skp | CDS | 752849:753811 - | A857 B258 C70 | 12.10 | -1.24 | Outer membrane chaperone precursor Skp (OmpH) | 1042 | 1780 |
THC0290_0619 | bamA | CDS | 753852:756521 - | A545 B180 C44 | 11.22 | -2.04 | Outer membrane protein assembly complex precursor, BamA | 1043 | 779 |
THC0290_0620 | uppS | CDS | 756505:757245 - | A1353 B467 C136 | 10.28 | -1.32 | Di-trans,poly-cis-decaprenylcistransferase | 1044 | 2511 |
THC0290_0621 | CDS | 757252:757935 - | A1353 B467 C136 | 10.02 | -1.55 | Protein of unknown function precursor, putative outer membrane protein | 1045 | 2512 | |
THC0290_0629 | tig | CDS | 763697:765022 + | A599 B183 C44 | 13.49 | -1.59 | Trigger factor (TF) | 1060 | 1002 |
THC0290_N_0460 | Rfp32 | indep | 767146:767422 - | A1768 B546 C143 | 6.06 | 1.73 | new transcription segment | 1066 | 3682 |
THC0290_N_0462 | 3prime | 768085:768500 - | A1646 B540 C143 | 7.07 | 1.04 | new transcription segment | 1070 | 3003 | |
THC0290_N_0463 | 3prime | 768444:768788 + | A1158 B395 C120 | 8.67 | -1.11 | new transcription segment | 1071 | 2193 | |
THC0290_N_0464 | Rfp33 | indep | 768887:769220 + | A1201 B413 C124 | 7.12 | -1.20 | new transcription segment | 1073 | 2255 |
THC0290_0636 | CDS | 770321:771202 - | A1765 B546 C143 | 9.18 | 3.04 | Probable lipoprotein precursor | 1076 | 3493 | |
THC0290_0640 | CDS | 773726:774790 + | A1783 B548 C143 | 9.10 | 1.16 | Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor | 1080 | 3832 | |
THC0290_0641 | CDS | 774935:776176 + | A1162 B397 C120 | 9.67 | -1.32 | Protein of unknown function precursor | 1081 | 2197 | |
THC0290_N_0466 | 5prime | 777700:777762 + | A553 B182 C44 | 7.99 | -1.49 | new transcription segment | 1083 | 799 | |
THC0290_0643 | dnaG | CDS | 777763:779748 + | A537 B180 C44 | 9.10 | -1.46 | DNA primase | 1084 | 735 |
THC0290_N_0467 | 3prime | 779421:779788 - | A1768 B546 C143 | 7.64 | 2.97 | new transcription segment | 1085 | 3729 | |
THC0290_0644 | CDS | 779789:780418 - | A1768 B546 C143 | 9.71 | 3.34 | Two-component system response regulatory protein, LuxR family | 1087 | 3728 | |
THC0290_0668 | pnp | CDS | 804981:807116 - | A586 B183 C44 | 12.69 | -1.16 | Polyribonucleotide nucleotidyltransferase | 1132 | 916 |
THC0290_0670 | CDS | 807710:809137 - | A1762 B546 C143 | 9.76 | 1.02 | Probable nucleoside-diphosphate-sugar epimerase | 1135 | 3400 | |
THC0290_0680 | CDS | 816720:817085 + | A1768 B546 C143 | 9.25 | 1.26 | Protein of unknown function | 1146 | 3721 | |
THC0290_N_0495 | intra | 817086:817137 + | A1674 B543 C143 | 8.92 | 2.22 | new transcription segment | 1147 | 3072 | |
THC0290_0681 | CDS | 817138:819144 + | A1674 B543 C143 | 11.13 | 2.40 | Probable TonB-dependent outer membrane receptor precursor | 1148 | 3071 | |
THC0290_0682 | CDS | 819184:819525 + | A1674 B543 C143 | 11.05 | 2.36 | Protein of unknown function | 1149 | 3069 | |
THC0290_0683 | CDS | 819616:819906 + | A1674 B543 C143 | 12.57 | 1.19 | Hypothetical protein | 1150 | 3070 | |
THC0290_0684 | sulP | CDS | 819971:821572 + | A1674 B543 C143 | 12.85 | 1.15 | Probable sulfate permease | 1152 | 3076 |
THC0290_0685 | cynT | CDS | 821595:822230 + | A1674 B543 C143 | 13.09 | 1.03 | Carbonic anhydrase | 1153 | 3077 |
THC0290_0703 | CDS | 840392:840925 + | A540 B180 C44 | 10.22 | -1.45 | Protein of unknown function | 1184 | 751 | |
THC0290_0704 | recQ2 | CDS | 840970:842862 + | A601 B183 C44 | 9.38 | -1.54 | ATP-dependent DNA helicase RecQ2 | 1185 | 1183 |
THC0290_N_0513 | intra | 843897:844024 + | A533 B180 C44 | 10.00 | -1.08 | new transcription segment | 1188 | 727 | |
THC0290_0707 | CDS | 844456:845016 + | A1762 B546 C143 | 11.62 | 1.26 | Putative transcriptional regulator | 1190 | 3410 | |
THC0290_N_0517 | 3prime | 845017:845453 + | A1643 B540 C143 | 6.94 | 1.69 | new transcription segment | 1193 | 2986 | |
THC0290_0710 | ribH | CDS | 846778:847347 - | A600 B183 C44 | 12.00 | -1.08 | Riboflavin synthase, beta subunit | 1198 | 1103 |
THC0290_N_0521 | intra | 847348:847417 - | A454 B168 C44 | 10.44 | -1.54 | new transcription segment | 1199 | 589 | |
THC0290_0711 | CDS | 847418:848209 - | A600 B183 C44 | 12.90 | -1.43 | Protein of unknown function | 1200 | 1104 | |
THC0290_0713 | CDS | 849601:850293 + | A1042 B344 C102 | 11.86 | 1.33 | Thioredoxin family protein precursor | 1202 | 2004 | |
THC0290_0720 | CDS | 856373:856993 - | A804 B244 C67 | 7.90 | -1.10 | Pseudouridylate synthase | 1212 | 1700 | |
THC0290_0725 | carB | CDS | 860354:863206 - | A787 B239 C67 | 10.34 | -1.16 | Carbamoyl-phosphate synthase large subunit | 1218 | 1675 |
THC0290_N_0526 | intra | 863207:863394 - | A787 B239 C67 | 10.11 | -1.04 | new transcription segment | 1219 | 1676 | |
THC0290_0727 | CDS | 863756:864271 + | A846 B256 C70 | 10.40 | -1.39 | Probable transmembrane protein of unknown function | 1223 | 1766 | |
THC0290_N_0529 | 3prime | 864272:864411 + | A845 B256 C70 | 7.35 | -1.43 | new transcription segment | 1224 | 1764 | |
THC0290_0728 | groL | CDS | 864839:866467 - | A840 B254 C69 | 13.54 | -1.71 | 60 kDa chaperonin GroEL | 1225 | 1749 |
THC0290_N_0530 | intra | 866468:866905 - | A840 B254 C69 | 13.73 | -1.49 | new transcription segment | 1226 | 1751 | |
THC0290_0729 | groS | CDS | 866906:867181 - | A840 B254 C69 | 13.11 | -1.42 | 10 kDa chaperonin GroES | 1227 | 1750 |
THC0290_N_0535 | intra | 870545:870960 - | A1199 B413 C124 | 9.89 | -1.04 | new transcription segment | 1236 | 2246 | |
THC0290_N_0536 | 3prime | 872624:872743 - | A1802 B553 C144 | 6.80 | 1.15 | new transcription segment | 1238 | 3889 | |
THC0290_0735 | remH | CDS | 872744:873166 - | A256 B91 C27 | 13.42 | 1.56 | Gliding motility protein RemH precursor | 1239 | 334 |
THC0290_0736 | CDS | 873196:873774 - | A256 B91 C27 | 12.96 | 1.53 | Protein of unknown function precursor | 1240 | 335 | |
THC0290_0737 | CDS | 873818:874630 - | A1063 B352 C104 | 11.54 | 1.65 | Protein of unknown function | 1241 | 2032 | |
THC0290_0738 | topA | CDS | 875152:877668 + | A544 B180 C44 | 10.59 | -1.84 | DNA topoisomerase I | 1242 | 768 |
THC0290_0739 | fjo29 | CDS | 877672:878817 + | A859 B259 C70 | 10.37 | -1.20 | Protein of unknown function Fjo29 | 1243 | 1782 |
THC0290_0745 | CDS | 884948:885376 - | A1768 B546 C143 | 10.65 | 1.17 | Protein of unknown function | 1254 | 3679 | |
THC0290_N_0543 | 5prime | 885343:885446 + | A844 B256 C70 | 8.52 | -1.78 | new transcription segment | 1255 | 1763 | |
THC0290_0746 | CDS | 885447:887357 + | A544 B180 C44 | 10.18 | -1.98 | Probably involved in regulation of translation initiation | 1256 | 769 | |
THC0290_N_0545 | 3prime | 887358:887776 + | A574 B183 C44 | 6.70 | -1.49 | new transcription segment | 1258 | 850 | |
THC0290_0747 | CDS | 887640:888794 - | A576 B183 C44 | 9.44 | -1.34 | Protein of unknown function | 1259 | 857 | |
THC0290_N_0549 | 3prime | 891554:891603 - | A294 B109 C31 | 5.18 | -1.50 | new transcription segment | 1265 | 379 | |
THC0290_0750 | CDS | 891604:892050 - | A801 B244 C67 | 11.13 | -1.99 | Probable DnaJ-class molecular chaperone | 1266 | 1692 | |
THC0290_N_0550 | 5prime | 892051:892112 - | A801 B244 C67 | 11.74 | -1.98 | new transcription segment | 1267 | 1693 | |
THC0290_N_0553 | intra | 893946:894137 + | A967 B307 C84 | 9.61 | -1.52 | new transcription segment | 1273 | 1910 | |
THC0290_0754 | CDS | 896547:899900 + | A1794 B549 C143 | 11.51 | 1.06 | Protein of unknown function precursor, putative adhesin | 1278 | 3851 | |
THC0290_N_0555 | 3prime | 899901:900114 + | A1794 B549 C143 | 11.01 | 2.11 | new transcription segment | 1279 | 3852 | |
THC0290_N_0559 | 3prime | 906568:906717 + | A1662 B542 C143 | 10.87 | 1.55 | new transcription segment | 1289 | 3035 | |
THC0290_N_0564 | Rfp39 | indep | 913998:914265 + | A1768 B546 C143 | 5.71 | 1.34 | new transcription segment | 1301 | 3685 |
THC0290_0774 | CDS | 922230:925658 - | A1772 B546 C143 | 9.57 | 1.62 | Methylmalonyl-CoA mutase | 1316 | 3796 | |
THC0290_0775 | CDS | 926006:926245 + | A1768 B546 C143 | 9.69 | 1.43 | Hypothetical protein | 1317 | 3661 | |
THC0290_0776 | CDS | 926245:926562 + | A1765 B546 C143 | 9.55 | 1.26 | Putative plasmid stabilization system protein | 1318 | 3552 | |
THC0290_0779 | CDS | 928488:929126 + | A1765 B546 C143 | 8.42 | 1.15 | Probable pyrophosphohydrolase | 1324 | 3550 | |
THC0290_N_0581 | repeated_region | 942166:942314 + | A866 B262 C70 | 9.53 | -1.06 | new transcription segment | 1344 | 1791 | |
THC0290_N_0582 | 3prime | 943455:943570 - | A1646 B540 C143 | 10.09 | 1.04 | new transcription segment | 1346 | 3000 | |
THC0290_0793 | CDS | 943571:944119 - | A1088 B365 C107 | 11.30 | 3.01 | Probable transmembrane protein of unknown function | 1347 | 2094 | |
THC0290_0794 | fhuA | CDS | 944125:946380 - | A1088 B365 C107 | 12.63 | 2.57 | Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA | 1348 | 2095 |
THC0290_0795 | prfA | CDS | 947122:948195 + | A976 B308 C84 | 11.80 | -1.45 | Peptide chain release factor 1 (RF-1) | 1350 | 1925 |
THC0290_N_0583 | intra | 948196:948325 + | A976 B308 C84 | 11.40 | -1.77 | new transcription segment | 1351 | 1926 | |
THC0290_0796 | CDS | 948326:950458 + | A639 B183 C44 | 12.76 | -1.38 | Probable outer membrane protein precursor, OmpA family | 1352 | 1389 | |
THC0290_N_0588 | Rfp41 | indep | 955247:955570 + | A1838 B563 C145 | 5.87 | 1.19 | new transcription segment | 1362 | 3932 |
THC0290_0815 | oxaA | CDS | 970617:972518 - | A800 B244 C67 | 11.77 | -1.16 | Inner membrane protein OxaA | 1386 | 1690 |
THC0290_N_0599 | intra | 972519:972611 - | A800 B244 C67 | 11.27 | -1.07 | new transcription segment | 1387 | 1689 | |
THC0290_N_0601 | Rfp42 | indep | 976566:976680 + | A1248 B419 C125 | 5.57 | 1.22 | new transcription segment | 1393 | 2355 |
THC0290_0822 | fjo19 | CDS | 981245:982255 + | A609 B183 C44 | 10.23 | -1.04 | Protein of unknown function Fjo19 | 1398 | 1269 |
THC0290_0828 | CDS | 988051:988332 - | A1762 B546 C143 | 11.63 | 3.79 | Protein of unknown function | 1405 | 3391 | |
THC0290_0829 | CDS | 988595:989146 + | A1762 B546 C143 | 10.15 | 1.23 | Probable ribosomal-protein-amino-adic N-acetyltransferase | 1406 | 3411 | |
THC0290_0832 | dcp2 | CDS | 990238:992370 - | A1796 B549 C143 | 9.36 | 1.14 | Peptidyl-dipeptidase precursor Dcp2 | 1410 | 3876 |
THC0290_0833 | CDS | 992645:993088 + | A848 B256 C70 | 9.09 | -1.02 | Protein of unknown function | 1411 | 1768 | |
THC0290_N_0608 | intra | 993089:993197 + | A1539 B521 C143 | 7.75 | -1.03 | new transcription segment | 1413 | 2781 | |
THC0290_N_0612 | 3prime-PT | 994437:994783 + | A1732 B546 C143 | 7.73 | -1.79 | new transcription segment | 1418 | 3203 | |
THC0290_0837 | wzxE | CDS | 996345:997619 - | A327 B122 C33 | 7.52 | -1.37 | Putative lipopolysaccharide biosynthesis protein WzxE | 1421 | 414 |
THC0290_0838 | CDS | 997620:998723 - | A327 B122 C33 | 9.52 | -1.14 | Probable aminotransferase involved in lipopolysaccharide biosynthesis | 1422 | 415 | |
THC0290_0842 | relA | CDS | 1001835:1004054 + | A1564 B526 C143 | 12.17 | 1.17 | GTP diphosphokinase | 1428 | 2831 |
THC0290_N_0617 | 3prime | 1004055:1004461 + | A1178 B404 C122 | 7.26 | 1.02 | new transcription segment | 1429 | 2215 | |
THC0290_0849 | CDS | 1009303:1009518 - | A501 B175 C44 | 6.72 | -1.26 | Hypothetical transmembrane protein | 1437 | 669 | |
THC0290_0852 | nadC | CDS | 1011355:1012212 + | A525 B180 C44 | 10.46 | -1.38 | Nicotinate-nucleotide diphosphorylase (carboxylating) | 1441 | 708 |
THC0290_0853 | yfkH | CDS | 1012228:1013175 + | A601 B183 C44 | 10.38 | -1.65 | Protein of unknown function YfkH | 1442 | 1168 |
THC0290_N_0621 | 3prime | 1016422:1016591 - | A1765 B546 C143 | 11.68 | 2.34 | new transcription segment | 1446 | 3553 | |
THC0290_0856 | CDS | 1016592:1017284 - | A1762 B546 C143 | 10.92 | 1.66 | Two-component system response regulatory protein, LytTR family | 1448 | 3418 | |
THC0290_0857 | rpsF | CDS | 1017453:1017794 + | A542 B180 C44 | 13.94 | -1.29 | 30S ribosomal protein S6 | 1449 | 760 |
THC0290_N_0623 | intra | 1018097:1018161 + | A542 B180 C44 | 16.50 | -1.02 | new transcription segment | 1451 | 759 | |
THC0290_0859 | rplI | CDS | 1018162:1018605 + | A542 B180 C44 | 13.00 | -1.39 | 50S ribosomal protein L9 | 1452 | 757 |
THC0290_N_0625 | intra | 1018645:1018746 + | A810 B244 C67 | 7.80 | -1.75 | new transcription segment | 1453 | 1709 | |
THC0290_0860 | CDS | 1018747:1019220 + | A586 B183 C44 | 8.89 | -2.22 | Protein of unknown function | 1454 | 912 | |
THC0290_0878 | CDS | 1034261:1036504 + | A1796 B549 C143 | 6.81 | 1.09 | Protein of unknown function precursor, putative adhesin | 1478 | 3881 | |
THC0290_0889 | guaB | CDS | 1046670:1048142 + | A380 B145 C41 | 11.51 | -1.64 | IMP dehydrogenase | 1495 | 487 |
THC0290_N_0638 | intra | 1048143:1048274 + | A380 B145 C41 | 10.70 | -1.41 | new transcription segment | 1496 | 488 | |
THC0290_0890 | CDS | 1048275:1048847 + | A380 B145 C41 | 10.48 | -1.54 | Nucleoside-triphosphatase | 1497 | 486 | |
THC0290_N_0639 | intra | 1048848:1048930 + | A646 B183 C44 | 8.22 | -1.63 | new transcription segment | 1498 | 1406 | |
THC0290_0891 | CDS | 1048948:1050882 + | A967 B307 C84 | 12.28 | -1.25 | Probable ATP-dependent RNA helicase, DEAD/DEAH box family | 1499 | 1911 | |
THC0290_0892 | CDS | 1051044:1052207 - | A1663 B542 C143 | 14.88 | 1.31 | Transposase IS4 family | 1502 | 3040 | |
THC0290_N_0646 | intra | 1066116:1066321 + | A640 B183 C44 | 10.17 | -1.15 | new transcription segment | 1521 | 1393 | |
THC0290_0922 | CDS | 1082167:1082580 + | A1649 B541 C143 | 10.12 | 1.25 | Protein of unknown function | 1549 | 3010 | |
THC0290_0923 | CDS | 1082679:1084841 + | A207 B76 C24 | 11.40 | 1.14 | Probable TonB-dependent outer membrane receptor precursor | 1550 | 265 | |
THC0290_0925 | CDS | 1086697:1087044 + | A1496 B512 C143 | 11.82 | 1.07 | Protein of unknown function | 1553 | 2712 | |
THC0290_0931 | CDS | 1092634:1095516 + | A1796 B549 C143 | 10.63 | 1.15 | Collagenase precursor | 1565 | 3878 | |
THC0290_N_0673 | 3prime | 1113220:1113416 - | A1656 B542 C143 | 12.04 | 1.49 | new transcription segment | 1589 | 3026 | |
THC0290_0944 | CDS | 1115625:1117259 + | A1762 B546 C143 | 10.85 | 1.58 | Probable S8 subtilisin family serine endopeptidase precursor | 1591 | 3401 | |
THC0290_N_0674 | intra | 1117260:1117379 + | A1037 B342 C102 | 10.92 | 1.33 | new transcription segment | 1592 | 1998 | |
THC0290_0945 | CDS | 1117380:1118318 + | A1036 B342 C102 | 11.01 | 1.00 | Probable dioxygenase | 1593 | 1996 | |
THC0290_N_0675 | Rfp45 | indep | 1119827:1119911 - | A1765 B546 C143 | 7.20 | 1.22 | new transcription segment | 1595 | 3510 |
THC0290_0947 | CDS | 1120307:1120960 - | A1768 B546 C143 | 8.82 | 1.36 | Protein of unknown function precursor | 1597 | 3698 | |
THC0290_N_0677 | 5prime | 1120961:1121203 - | A1768 B546 C143 | 9.43 | 1.83 | new transcription segment | 1598 | 3658 | |
THC0290_0949 | CDS | 1121975:1122373 - | A1520 B521 C143 | 7.00 | -1.77 | Protein of unknown function | 1601 | 2752 | |
THC0290_0950 | CDS | 1122619:1123467 - | A324 B121 C33 | 5.30 | -1.79 | Probable transcriptional regulator, AraC family | 1602 | 411 | |
THC0290_0951 | gene | 1123621:1123923 - | A321 B120 C33 | 6.67 | -1.46 | Fragment of Protein of unknown function precursor (part 2) | 1604 | 408 | |
THC0290_0959 | CDS | 1130552:1130911 - | A1781 B546 C143 | 10.33 | 1.05 | Probable transcriptional regulator | 1617 | 3825 | |
THC0290_N_0685 | intra | 1130912:1130976 - | A1127 B376 C109 | 9.89 | 1.44 | new transcription segment | 1618 | 2159 | |
THC0290_0960 | CDS | 1130977:1132209 - | A1779 B546 C143 | 9.52 | 1.10 | Major facilitator superfamily (MFS) permease | 1619 | 3815 | |
THC0290_N_0687 | 3prime | 1134182:1134362 - | A197 B70 C21 | 7.94 | 1.86 | new transcription segment | 1624 | 244 | |
THC0290_0968 | CDS | 1137665:1138330 + | A1601 B535 C143 | 9.67 | 1.41 | Protein of unknown function | 1631 | 2880 | |
THC0290_0978 | katG | CDS | 1149873:1152080 + | A1791 B549 C143 | 10.26 | 2.27 | Bi-functional catalase-peroxidase | 1649 | 3846 |
THC0290_0981 | CDS | 1153330:1153587 + | A1864 B574 C149 | 12.11 | 1.35 | Hypothetical protein | 1653 | 3963 | |
THC0290_0982 | CDS | 1153638:1155428 - | A696 B197 C51 | 11.30 | -1.35 | Acyl-CoA dehydrogenase family protein | 1655 | 1505 | |
THC0290_N_0702 | intra | 1155429:1155590 - | A694 B196 C51 | 9.63 | -1.61 | new transcription segment | 1656 | 1501 | |
THC0290_0983 | CDS | 1155591:1156772 - | A696 B197 C51 | 10.80 | -1.72 | Acetyl-CoA C-acyltransferase | 1657 | 1506 | |
THC0290_N_0703 | intra | 1156773:1156906 - | A696 B197 C51 | 11.89 | -1.62 | new transcription segment | 1658 | 1508 | |
THC0290_0985 | CDS | 1157332:1159722 - | A696 B197 C51 | 11.16 | -1.61 | 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein | 1660 | 1504 | |
THC0290_0986 | CDS | 1159706:1160173 - | A884 B274 C75 | 10.04 | -1.92 | Probable transcriptional regulator, MarR-family | 1661 | 1810 | |
THC0290_0987 | ggt | CDS | 1160637:1162322 - | A606 B183 C44 | 10.58 | -1.27 | Gamma-glutamyltransferase | 1662 | 1256 |
THC0290_N_0709 | 5prime | 1168710:1168824 + | A838 B254 C69 | 9.35 | -1.75 | new transcription segment | 1671 | 1746 | |
THC0290_0994 | lon | CDS | 1168825:1171275 + | A837 B254 C69 | 11.65 | -1.91 | S16 family, ATP-dependent endopeptidase La | 1672 | 1744 |
THC0290_N_0710 | intra | 1171276:1171449 + | A836 B254 C69 | 7.66 | -1.31 | new transcription segment | 1673 | 1743 | |
THC0290_N_0711 | intra | 1172482:1172662 + | A20 B10 C5 | 9.44 | -1.29 | new transcription segment | 1675 | 25 | |
THC0290_0996 | cmk | CDS | 1172663:1173343 + | A402 B153 C43 | 9.24 | -1.21 | Cytidylate kinase | 1677 | 516 |
THC0290_0997 | nupG | CDS | 1173416:1174669 + | A539 B180 C44 | 10.17 | -1.62 | Major facilitator superfamily (MFS), H+ Symporter (NHS) family, nucleoside permease | 1678 | 739 |
THC0290_0998 | CDS | 1174719:1175126 - | A600 B183 C44 | 13.31 | -1.49 | Hypothetical protein | 1679 | 1075 | |
THC0290_0999 | CDS | 1175136:1176107 - | A600 B183 C44 | 13.30 | -1.49 | Protein of unknown function | 1680 | 1076 | |
THC0290_N_0723 | intra | 1192145:1192355 + | A1747 B546 C143 | 10.06 | 1.08 | new transcription segment | 1705 | 3248 | |
THC0290_N_0725 | 3prime | 1194079:1194140 + | A632 B183 C44 | 6.60 | -1.65 | new transcription segment | 1709 | 1365 | |
THC0290_1014 | CDS | 1194317:1195657 + | A710 B202 C53 | 9.79 | -1.65 | Probable sigma-54 dependent two-component system response regulatory protein | 1710 | 1544 | |
THC0290_1015 | CDS | 1195821:1196102 + | A1628 B539 C143 | 5.96 | 2.59 | Protein of unknown function | 1711 | 2940 | |
THC0290_1016 | kdpF | CDS | 1196475:1196552 + | A1628 B539 C143 | 5.05 | 1.61 | Potassium-transporting ATPase F subunit | 1712 | 2941 |
THC0290_1017 | kdpA | CDS | 1196669:1198390 + | A1628 B539 C143 | 5.42 | 1.74 | Potassium-transporting ATPase A subunit | 1713 | 2942 |
THC0290_1018 | kdpB | CDS | 1198491:1200524 + | A1628 B539 C143 | 5.61 | 1.61 | Potassium-transporting ATPase B subunit | 1714 | 2943 |
THC0290_1024 | CDS | 1206629:1207081 - | A1768 B546 C143 | 9.90 | 1.19 | Probable lipoprotein precursor | 1723 | 3628 | |
THC0290_1031 | clpS | CDS | 1209391:1209666 - | A1612 B535 C143 | 12.40 | 1.52 | ATP-dependent Clp protease adaptor protein ClpS | 1731 | 2901 |
THC0290_1032 | prmA | CDS | 1209707:1210540 - | A804 B244 C67 | 10.65 | -1.10 | 50S ribosomal protein L11 lysine methyltransferase | 1732 | 1701 |
THC0290_1035 | CDS | 1212972:1213316 + | A1762 B546 C143 | 12.95 | 1.84 | Protein of unknown function | 1736 | 3394 | |
THC0290_N_0733 | 3prime | 1213317:1213392 + | A1762 B546 C143 | 7.19 | 1.75 | new transcription segment | 1737 | 3413 | |
THC0290_N_0734 | 3prime | 1213392:1213452 - | A1768 B546 C143 | 11.99 | 1.58 | new transcription segment | 1738 | 3723 | |
THC0290_1036 | fjo10 | CDS | 1213453:1213833 - | A1768 B546 C143 | 11.60 | 1.59 | Probable lipoprotein precursor Fjo10. Putative cation transport ATPase | 1739 | 3724 |
THC0290_1042 | cafA | CDS | 1218140:1219684 - | A599 B183 C44 | 12.18 | -3.16 | Ribonuclease G | 1749 | 1006 |
THC0290_N_0738 | intra | 1219685:1219937 - | A599 B183 C44 | 11.55 | -3.41 | new transcription segment | 1750 | 1007 | |
THC0290_N_0739 | 3prime | 1219938:1220068 - | A540 B180 C44 | 13.95 | -1.48 | new transcription segment | 1751 | 746 | |
THC0290_1043 | hupA | CDS | 1220069:1220365 - | A540 B180 C44 | 12.30 | -2.67 | Histone-like bacterial DNA-binding protein HU-alpha | 1752 | 744 |
THC0290_N_0742 | Rfp48 | indep | 1225076:1225422 + | A1769 B546 C143 | 6.57 | 1.23 | new transcription segment | 1759 | 3742 |
THC0290_1055 | CDS | 1233132:1235285 + | A556 B183 C44 | 9.85 | -1.93 | Probable outer membrane protein precursor | 1770 | 805 | |
THC0290_1056 | CDS | 1235407:1236027 + | A556 B183 C44 | 12.01 | -1.24 | Protein of unknown function | 1771 | 806 | |
THC0290_1057 | CDS | 1236086:1237453 + | A556 B183 C44 | 12.35 | -1.13 | Membrane protein containing an internal histidine kinase domain | 1773 | 810 | |
THC0290_1058 | CDS | 1237456:1237776 + | A556 B183 C44 | 11.31 | -1.23 | Protein of unknown function | 1774 | 811 | |
THC0290_1059 | CDS | 1237798:1238103 + | A556 B183 C44 | 12.02 | -1.24 | Protein of unknown function | 1775 | 809 | |
THC0290_1060 | CDS | 1238111:1238461 + | A556 B183 C44 | 11.69 | -1.09 | Protein of unknown function | 1776 | 812 | |
THC0290_N_0748 | intra | 1238462:1238530 + | A556 B183 C44 | 10.70 | -1.20 | new transcription segment | 1777 | 807 | |
THC0290_1066 | CDS | 1243591:1244754 + | A1663 B542 C143 | 14.82 | 1.37 | Transposase IS4 family | 1784 | 3038 | |
THC0290_N_0751 | 3prime | 1248849:1249302 - | A1830 B561 C145 | 6.75 | 1.13 | new transcription segment | 1790 | 3923 | |
THC0290_N_0752 | 3prime | 1249246:1250138 + | A124 B51 C18 | 6.74 | -1.02 | new transcription segment | 1791 | 157 | |
THC0290_1076 | CDS | 1254381:1255154 + | A601 B183 C44 | 9.95 | -1.02 | Probable polysaccharide deacetylase | 1797 | 1155 | |
THC0290_1101 | CDS | 1286214:1287986 - | A331 B122 C33 | 8.94 | -1.92 | Putative sugar-transporting permease | 1841 | 430 | |
THC0290_N_0771 | Rfp49 | indep | 1288802:1288918 - | A1765 B546 C143 | 7.35 | 1.53 | new transcription segment | 1843 | 3531 |
THC0290_N_0773 | 3prime | 1289168:1289525 - | A1125 B375 C109 | 12.85 | 1.62 | new transcription segment | 1845 | 2157 | |
THC0290_N_0774 | 5prime | 1290924:1291096 - | A1765 B546 C143 | 11.78 | 1.76 | new transcription segment | 1847 | 3541 | |
THC0290_1104 | CDS | 1291219:1291386 + | A1760 B546 C143 | 14.35 | 1.00 | Hypothetical protein | 1848 | 3378 | |
THC0290_N_0775 | 3prime | 1291385:1291947 - | A1867 B576 C149 | 9.57 | 1.40 | new transcription segment | 1849 | 3969 | |
THC0290_1106 | CDS | 1294577:1294918 - | A1614 B535 C143 | 11.57 | 1.28 | Probable arsenate reductase (glutaredoxin) | 1853 | 2910 | |
THC0290_N_0779 | 3prime | 1297987:1298261 - | A1644 B540 C143 | 6.81 | 1.46 | new transcription segment | 1857 | 2989 | |
THC0290_1110 | CDS | 1298262:1298678 - | A1721 B546 C143 | 9.99 | 1.76 | Probable arsenate reductase (glutaredoxin) | 1859 | 3177 | |
THC0290_1111 | CDS | 1298680:1299294 - | A1721 B546 C143 | 10.56 | 1.63 | Protein of unknown function | 1860 | 3178 | |
THC0290_1112 | CDS | 1299295:1299420 - | A1721 B546 C143 | 9.71 | 1.58 | Hypothetical protein | 1861 | 3179 | |
THC0290_1113 | CDS | 1299423:1299896 - | A1721 B546 C143 | 10.46 | 1.64 | Protein of unknown function | 1862 | 3175 | |
THC0290_N_0781 | intra | 1299897:1299959 - | A1721 B546 C143 | 11.48 | 1.74 | new transcription segment | 1863 | 3176 | |
THC0290_1114 | CDS | 1299960:1300283 - | A1721 B546 C143 | 9.13 | 1.38 | Probable transcriptional regulator, ArsR family | 1864 | 3174 | |
THC0290_1125 | CDS | 1313339:1315027 - | A578 B183 C44 | 9.39 | -1.17 | Probable type I restriction-modification system, DNA specificity domain protein | 1880 | 861 | |
THC0290_1126 | CDS | 1315029:1315811 - | A711 B202 C53 | 9.85 | -1.26 | Protein of unknown function | 1881 | 1545 | |
THC0290_1127 | CDS | 1315808:1316614 - | A711 B202 C53 | 9.31 | -1.00 | Hypothetical protein | 1882 | 1546 | |
THC0290_1135 | CDS | 1327350:1327610 - | A1768 B546 C143 | 5.93 | 2.23 | Hypothetical protein | 1893 | 3711 | |
THC0290_1137 | CDS | 1329295:1330215 - | A1795 B549 C143 | 5.93 | 2.35 | Probable transcriptional regulator, AraC family | 1895 | 3873 | |
THC0290_1138 | CDS | 1330262:1330645 - | A1795 B549 C143 | 6.08 | 1.61 | Hypothetical protein | 1896 | 3857 | |
THC0290_1193 | CDS | 1381373:1381627 + | A1768 B546 C143 | 7.16 | 2.91 | Hypothetical protein | 1953 | 3714 | |
THC0290_1194 | CDS | 1381701:1381925 + | A1668 B542 C143 | 4.93 | 1.44 | Hypothetical protein | 1954 | 3053 | |
THC0290_1195 | CDS | 1381938:1382327 + | A1768 B546 C143 | 5.04 | 1.09 | Hypothetical protein | 1955 | 3708 | |
THC0290_1204 | CDS | 1386496:1386726 + | A1768 B546 C143 | 8.37 | 1.10 | Hypothetical protein | 1964 | 3689 | |
THC0290_1205 | CDS | 1386748:1387101 + | A1768 B546 C143 | 6.67 | 1.01 | Hypothetical protein | 1965 | 3690 | |
THC0290_1207 | CDS | 1387510:1389336 - | A1768 B546 C143 | 6.45 | 1.01 | Protein of unknown function | 1967 | 3716 | |
THC0290_N_0791 | Rfp52 | indep | 1390344:1391243 - | A1768 B546 C143 | 7.09 | 1.18 | new transcription segment | 1969 | 3695 |
THC0290_N_0792 | 3prime | 1396739:1396899 + | A1646 B540 C143 | 7.84 | 1.34 | new transcription segment | 1973 | 2999 | |
THC0290_N_0793 | 3prime | 1396776:1396854 - | A1064 B352 C104 | 7.16 | 1.40 | new transcription segment | 1974 | 2034 | |
THC0290_1213 | CDS | 1397195:1398091 - | A1064 B352 C104 | 9.74 | 1.47 | Probable CRISPR-associated (Cas) protein. Cas 1 family | 1977 | 2033 | |
THC0290_miscRNA_0044 | Rfp54 | misc_RNA | 1402818:1403137 + | A1768 B546 C143 | 15.21 | 1.09 | Bacterial Rnase P class A | 1982 | 3726 |
THC0290_1223 | CDS | 1418395:1418796 - | A1795 B549 C143 | 9.23 | 1.19 | Protein of unknown function | 2000 | 3874 | |
THC0290_1224 | CDS | 1418799:1419512 - | A1795 B549 C143 | 10.57 | 1.29 | Protein of unknown function | 2002 | 3875 | |
THC0290_1229 | CDS | 1423173:1425032 - | A600 B183 C44 | 11.43 | -1.03 | Probable M61 family peptidase precursor | 2011 | 1098 | |
THC0290_1233 | CDS | 1426680:1427324 + | A1294 B437 C127 | 8.49 | 1.87 | Probable peroxiredoxin | 2015 | 2435 | |
THC0290_1236 | CDS | 1428816:1429214 - | A1793 B549 C143 | 9.37 | 1.17 | Cytochrome c family protein | 2018 | 3849 | |
THC0290_1237 | CDS | 1429217:1429477 - | A684 B192 C48 | 8.17 | 1.46 | Hypothetical transmembrane protein | 2019 | 1484 | |
THC0290_1238 | CDS | 1429483:1430496 - | A684 B192 C48 | 8.02 | 1.20 | Cytochrome c oxidase family protein | 2020 | 1485 | |
THC0290_1239 | CDS | 1430503:1432671 - | A688 B193 C48 | 7.77 | 1.10 | Cytochrome c oxidase family protein | 2021 | 1494 | |
THC0290_1244 | CDS | 1436703:1437329 - | A1768 B546 C143 | 8.65 | 1.10 | Probable transcriptional regulatory protein, Crp/Fnr family | 2028 | 3709 | |
THC0290_N_0809 | intra | 1437888:1437991 - | A543 B180 C44 | 7.22 | -2.59 | new transcription segment | 2031 | 765 | |
THC0290_1245 | CDS | 1438036:1438314 - | A545 B180 C44 | 11.75 | -1.78 | Thiol:disulfide interchange protein, C-terminal region | 2032 | 772 | |
THC0290_N_0811 | intra | 1438315:1438460 - | A545 B180 C44 | 12.57 | -1.92 | new transcription segment | 2033 | 774 | |
THC0290_1246 | CDS | 1438461:1439183 - | A545 B180 C44 | 12.57 | -2.16 | Thiol:disulfide interchange lipoprotein precursor, N-terminal region | 2034 | 773 | |
THC0290_1247 | CDS | 1439294:1439668 + | A1762 B546 C143 | 8.80 | 1.19 | Protein of unknown function | 2035 | 3421 | |
THC0290_N_0814 | Rfp56 | indep | 1444415:1444724 - | A1768 B546 C143 | 6.15 | 1.25 | new transcription segment | 2041 | 3700 |
THC0290_N_0815 | 3prime | 1446042:1446224 - | A1762 B546 C143 | 10.25 | 3.16 | new transcription segment | 2043 | 3426 | |
THC0290_1252 | CDS | 1446225:1446704 - | A1762 B546 C143 | 11.46 | 3.04 | Universal stress protein, UspA family | 2044 | 3425 | |
THC0290_N_0816 | intra | 1446727:1446954 - | A1795 B549 C143 | 7.98 | 1.02 | new transcription segment | 2045 | 3872 | |
THC0290_1253 | CDS | 1446955:1448118 - | A1762 B546 C143 | 9.31 | 1.03 | Probable two-component system response regulatory protein - glycosyl transferase, group 2 family protein | 2046 | 3395 | |
THC0290_1254 | CDS | 1448226:1451315 + | A1664 B542 C143 | 6.63 | 1.25 | Probable transmembrane protein | 2047 | 3043 | |
THC0290_1255 | CDS | 1451315:1452553 + | A1874 B578 C149 | 6.69 | 1.18 | Protein of unknown function precursor | 2048 | 3976 | |
THC0290_1256 | CDS | 1452537:1454093 + | A1602 B535 C143 | 7.52 | 1.17 | Glycoside hydrolase, family 5 | 2049 | 2882 | |
THC0290_N_0818 | 3prime | 1459920:1459991 + | A1589 B533 C143 | 5.28 | 1.58 | new transcription segment | 2055 | 2862 | |
THC0290_1264 | CDS | 1464096:1465640 - | A801 B244 C67 | 10.18 | -1.29 | Putative DNA or RNA helicase | 2060 | 1696 | |
THC0290_N_0821 | 3prime | 1467104:1468011 - | A1779 B546 C143 | 8.40 | 1.63 | new transcription segment | 2065 | 3813 | |
THC0290_1268 | CDS | 1468012:1468398 - | A1768 B546 C143 | 12.02 | 1.26 | Acyl-CoA hydrolase family protein | 2066 | 3703 | |
THC0290_1269 | CDS | 1468395:1468811 - | A1768 B546 C143 | 10.47 | 1.38 | MutT/nudix family protein | 2067 | 3635 | |
THC0290_1270 | CDS | 1468900:1469292 + | A1615 B535 C143 | 10.19 | 1.65 | Protein of unknown function | 2068 | 2917 | |
THC0290_N_0822 | 3prime | 1469293:1469476 + | A1615 B535 C143 | 8.98 | 1.87 | new transcription segment | 2069 | 2918 | |
THC0290_1271 | hisIE | CDS | 1469304:1469903 - | A723 B206 C54 | 5.56 | -1.65 | Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase, Phosphoribosyl-ATP pyrophosphatase] | 2070 | 1579 |
THC0290_1272 | hisF | CDS | 1469906:1470661 - | A723 B206 C54 | 5.85 | -1.48 | Imidazole glycerol phosphate synthase subunit HisF | 2071 | 1580 |
THC0290_1273 | hisA | CDS | 1470665:1471390 - | A708 B202 C53 | 5.82 | -2.34 | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase | 2072 | 1538 |
THC0290_1274 | hisH | CDS | 1471545:1472126 - | A723 B206 C54 | 6.96 | -1.30 | Imidazole glycerol phosphate synthase subunit HisH | 2074 | 1578 |
THC0290_N_0823 | intra | 1472127:1472214 - | A708 B202 C53 | 5.36 | -2.26 | new transcription segment | 2075 | 1539 | |
THC0290_1275 | hisB | CDS | 1472215:1473351 - | A709 B202 C53 | 7.33 | -1.34 | Histidine biosynthesis bifunctional protein HisB [Includes: Histidinol-phosphatase (EC 3.1.3.15), Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD)] | 2076 | 1540 |
THC0290_1276 | hisC | CDS | 1473351:1474391 - | A709 B202 C53 | 7.01 | -1.91 | Histidinol-phosphate transaminase | 2077 | 1541 |
THC0290_1277 | hisD | CDS | 1474384:1475673 - | A709 B202 C53 | 7.22 | -2.01 | Histidinol dehydrogenase | 2078 | 1542 |
THC0290_1278 | hisG | CDS | 1475685:1476542 - | A709 B202 C53 | 6.90 | -2.44 | ATP phosphoribosyltransferase | 2079 | 1543 |
THC0290_1281 | CDS | 1479547:1481574 - | A1105 B371 C109 | 8.50 | 1.19 | Probable transmembrane protein of unknown function | 2085 | 2129 | |
THC0290_1285 | CDS | 1485338:1485874 + | A1642 B540 C143 | 9.96 | 1.04 | Probable DNA polymerase III subunit | 2092 | 2981 | |
THC0290_1286 | CDS | 1485887:1486099 - | A1765 B546 C143 | 8.77 | 1.10 | Hypothetical protein | 2095 | 3476 | |
THC0290_1293 | CDS | 1492056:1492418 - | A601 B183 C44 | 11.79 | -1.80 | Protein of unknown function | 2106 | 1174 | |
THC0290_1294 | CDS | 1492421:1493350 - | A601 B183 C44 | 12.61 | -1.46 | Probable UDP-N-acetylglucosamine acyltransferase | 2107 | 1175 | |
THC0290_1295 | efp | CDS | 1493357:1493920 - | A601 B183 C44 | 12.69 | -1.21 | Elongation factor P (EF-P) | 2108 | 1173 |
THC0290_N_0837 | intra | 1493921:1493987 - | A600 B183 C44 | 11.56 | -1.53 | new transcription segment | 2109 | 1087 | |
THC0290_1296 | lpxA | CDS | 1493988:1494770 - | A600 B183 C44 | 12.13 | -1.41 | Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase | 2110 | 1085 |
THC0290_N_0838 | intra | 1494771:1494824 - | A600 B183 C44 | 11.88 | -1.03 | new transcription segment | 2111 | 1082 | |
THC0290_1297 | lpxC/fabZ | CDS | 1494825:1496213 - | A600 B183 C44 | 12.07 | -1.06 | Bifunctional enzyme : UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase and (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase | 2112 | 1086 |
THC0290_1307 | CDS | 1507520:1509589 - | A1775 B546 C143 | 7.94 | 1.55 | Probable TonB-dependent outer membrane receptor precursor | 2130 | 3800 | |
THC0290_N_0846 | intra | 1509590:1509687 - | A1775 B546 C143 | 8.42 | 1.57 | new transcription segment | 2131 | 3801 | |
THC0290_1308 | CDS | 1509688:1510665 - | A1775 B546 C143 | 7.50 | 1.29 | Protein of unknown function precursor | 2132 | 3799 | |
THC0290_1309 | gene | 1510782:1511459 + | A1765 B546 C143 | 10.41 | 2.38 | Fragment of two-component system sensor histidine kinase (part 1) | 2133 | 3489 | |
THC0290_1310 | CDS | 1511467:1512630 - | A1663 B542 C143 | 14.89 | 1.31 | Transposase IS4 family | 2134 | 3042 | |
THC0290_1311 | gene | 1512751:1513449 + | A1765 B546 C143 | 8.32 | 1.64 | Fragment of two-component system sensor histidine kinase (part 2) | 2135 | 3491 | |
THC0290_1312 | CDS | 1513488:1514048 - | A1745 B546 C143 | 8.36 | -1.14 | Protein of unknown function | 2136 | 3233 | |
THC0290_1316 | CDS | 1516638:1518572 + | A687 B193 C48 | 9.88 | 1.95 | Probable myosin-crossreactive antigen | 2140 | 1489 | |
THC0290_1317 | CDS | 1518688:1519584 + | A687 B193 C48 | 9.60 | 2.04 | 3-hydroxyacyl-CoA dehydrogenase family protein | 2141 | 1491 | |
THC0290_1318 | CDS | 1519624:1521210 + | A687 B193 C48 | 9.69 | 2.08 | Probable myosin-crossreactive antigen | 2142 | 1492 | |
THC0290_1319 | CDS | 1521229:1521756 + | A687 B193 C48 | 9.09 | 2.37 | Protein of unknown function | 2143 | 1490 | |
THC0290_1320 | CDS | 1521863:1523305 - | A600 B183 C44 | 11.97 | -1.91 | Phosphate transporter family protein | 2144 | 1105 | |
THC0290_1321 | CDS | 1523330:1523983 - | A542 B180 C44 | 11.00 | -1.70 | Protein of unknown function | 2145 | 762 | |
THC0290_N_0847 | intra | 1529964:1530048 + | A319 B119 C33 | 9.75 | -1.13 | new transcription segment | 2150 | 406 | |
THC0290_1336 | CDS | 1540353:1540895 + | A1763 B546 C143 | 9.60 | 1.31 | Protein of unknown function containing an heme NO Binding domain | 2162 | 3430 | |
THC0290_1337 | CDS | 1540897:1543509 + | A1762 B546 C143 | 9.57 | 1.06 | Two-component system sensor histidine kinase | 2163 | 3388 | |
THC0290_1338 | CDS | 1543512:1544648 + | A1876 B578 C149 | 9.85 | 1.13 | Protein of unknown function | 2164 | 3979 | |
THC0290_1339 | CDS | 1544648:1545673 + | A1876 B578 C149 | 9.38 | 1.33 | Probable two-component system sensor histidine kinase | 2165 | 3980 | |
THC0290_1340 | CDS | 1545673:1545990 + | A1876 B578 C149 | 9.16 | 1.05 | Probable two-component system histidine-containing phosphotransfer protein (HPt) | 2166 | 3981 | |
THC0290_1342 | CDS | 1546769:1548826 - | A1669 B542 C143 | 8.70 | 1.57 | Protein of unknown function precursor | 2170 | 3057 | |
THC0290_1343 | CDS | 1549155:1552811 - | A1795 B549 C143 | 6.77 | 3.25 | Protein of unknown function precursor containing PKD domains and a C-terminal secretion signal | 2171 | 3855 | |
THC0290_1344 | CDS | 1552913:1553296 - | A1795 B549 C143 | 7.05 | 2.43 | Transposase IS1 family | 2172 | 3856 | |
THC0290_1347 | CDS | 1556495:1558387 + | A511 B179 C44 | 11.44 | -1.10 | Peptidase, U32 family | 2177 | 682 | |
THC0290_1348 | bfmBA | CDS | 1558467:1560443 - | A600 B183 C44 | 11.57 | -1.06 | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) | 2180 | 1107 |
THC0290_N_0858 | intra | 1562632:1562975 + | A875 B268 C74 | 12.97 | -1.03 | new transcription segment | 2186 | 1800 | |
THC0290_1353 | CDS | 1563922:1564455 + | A608 B183 C44 | 10.02 | -1.03 | Probable ribosomal-protein-amino-adic N-acetyltransferase | 2189 | 1265 | |
THC0290_1354 | CDS | 1564460:1564954 + | A585 B183 C44 | 8.84 | -1.09 | Protein of unknown function | 2190 | 909 | |
THC0290_1360 | CDS | 1571085:1571513 - | A785 B238 C67 | 9.52 | -2.44 | Protein of unknown function | 2199 | 1672 | |
THC0290_N_0868 | intra | 1581049:1581297 - | A1745 B546 C143 | 8.50 | -1.36 | new transcription segment | 2212 | 3236 | |
THC0290_1369 | CDS | 1581298:1582101 - | A636 B183 C44 | 8.75 | -2.68 | Probable short-chain type dehydrogenase | 2214 | 1373 | |
THC0290_1370 | CDS | 1582125:1582283 - | A636 B183 C44 | 7.91 | -2.04 | Truncated chloromuconate cycloisomerase | 2215 | 1372 | |
THC0290_N_0869 | 3prime | 1582284:1582335 - | A503 B176 C44 | 6.46 | -1.98 | new transcription segment | 2216 | 671 | |
THC0290_1371 | CDS | 1582522:1583574 + | A315 B119 C33 | 9.60 | -1.01 | Putative glutamine cyclotransferase | 2218 | 401 | |
THC0290_N_0876 | 3prime | 1589665:1589857 - | A152 B59 C19 | 8.28 | 1.19 | new transcription segment | 2232 | 191 | |
THC0290_tRNA_0022 | tRNA | 1599447:1599524 + | A1768 B546 C143 | 11.87 | 1.70 | transfer RNA-Val | 2249 | 3669 | |
THC0290_1394 | infC | CDS | 1609187:1609600 + | A541 B180 C44 | 12.77 | -1.23 | Translation initiation factor IF-3 | 2263 | 755 |
THC0290_N_0887 | intra | 1609601:1609709 + | A541 B180 C44 | 12.71 | -1.24 | new transcription segment | 2264 | 756 | |
THC0290_N_0890 | Rfp63 | indep | 1610470:1610784 - | A1771 B546 C143 | 5.98 | 2.45 | new transcription segment | 2269 | 3794 |
THC0290_1397 | CDS | 1610957:1613875 + | A545 B180 C44 | 11.89 | -1.03 | Peptidase, M16 family | 2271 | 777 | |
THC0290_1399 | CDS | 1616418:1617146 - | A601 B183 C44 | 9.67 | -1.04 | Probable transmembrane protein of unknown function | 2276 | 1127 | |
THC0290_1400 | aldH | CDS | 1617164:1618492 - | A600 B183 C44 | 9.91 | -1.07 | Aldehyde dehydrogenase | 2277 | 1074 |
THC0290_1401 | CDS | 1618519:1619214 - | A600 B183 C44 | 10.57 | -1.02 | Probable 23S rRNA pseudouridine synthase | 2278 | 1077 | |
THC0290_1402 | CDS | 1619248:1620525 - | A600 B183 C44 | 9.76 | -1.31 | Probable S41 family peptidase precursor | 2279 | 1100 | |
THC0290_1403 | panB1 | CDS | 1620572:1621390 - | A517 B180 C44 | 10.30 | -1.10 | 3-methyl-2-oxobutanoate hydroxymethyltransferase panB1 | 2280 | 690 |
THC0290_1407 | CDS | 1626512:1627642 - | A1054 B347 C103 | 10.03 | 2.07 | Probable membrane fusion efflux lipoprotein precursor | 2289 | 2020 | |
THC0290_1408 | CDS | 1627716:1632059 - | A1054 B347 C103 | 10.12 | 2.09 | Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein | 2290 | 2021 | |
THC0290_N_0900 | intra | 1632060:1632186 - | A1054 B347 C103 | 9.00 | 1.78 | new transcription segment | 2291 | 2019 | |
THC0290_1409 | CDS | 1632187:1632579 - | A1625 B538 C143 | 10.93 | 1.72 | Protein of unknown function precursor | 2292 | 2936 | |
THC0290_N_0903 | Rfp64 | indep | 1635872:1635993 - | A1768 B546 C143 | 10.62 | 2.48 | new transcription segment | 2299 | 3683 |
THC0290_N_0907 | 5prime | 1645544:1645597 - | A1768 B546 C143 | 9.64 | 1.22 | new transcription segment | 2311 | 3605 | |
THC0290_1421 | CDS | 1645706:1646227 + | A609 B183 C44 | 9.90 | -1.13 | Probable transmembrane protein of unknown function | 2312 | 1270 | |
THC0290_1422 | CDS | 1646261:1647379 + | A530 B180 C44 | 9.74 | -1.42 | Protein of unknown function | 2313 | 721 | |
THC0290_1423 | CDS | 1647376:1649094 + | A530 B180 C44 | 9.08 | -1.63 | Protein of unknown function | 2314 | 722 | |
THC0290_N_0908 | intra | 1649095:1649507 + | A876 B269 C74 | 8.68 | -1.43 | new transcription segment | 2315 | 1801 | |
THC0290_1424 | CDS | 1649508:1651811 + | A1787 B549 C143 | 9.57 | -1.29 | Probable aminotransferase | 2316 | 3838 | |
THC0290_1425 | dnaK | CDS | 1652269:1654149 - | A840 B254 C69 | 14.15 | -1.82 | Chaperone protein DnaK | 2319 | 1755 |
THC0290_N_0917 | intra | 1658744:1659049 - | A590 B183 C44 | 9.78 | -1.03 | new transcription segment | 2327 | 937 | |
THC0290_N_0918 | intra | 1662236:1662355 - | A843 B255 C69 | 11.02 | -1.17 | new transcription segment | 2329 | 1762 | |
THC0290_1431 | CDS | 1662356:1662937 - | A843 B255 C69 | 10.82 | -1.21 | Probable transmembrane protein of unknown function | 2330 | 1761 | |
THC0290_1433 | CDS | 1664543:1665136 + | A1762 B546 C143 | 7.59 | 1.99 | Protein of unknown function | 2333 | 3408 | |
THC0290_N_0921 | 3prime-PT | 1668796:1669027 - | A1651 B542 C143 | 5.41 | 1.19 | new transcription segment | 2338 | 3012 | |
THC0290_1437 | CDS | 1669768:1670247 - | A781 B238 C67 | 11.06 | -1.11 | Probable transcriptional regulator, AsnC family | 2343 | 1667 | |
THC0290_N_0926 | 5prime | 1670248:1670308 - | A981 B309 C84 | 6.95 | -1.12 | new transcription segment | 2344 | 1934 | |
THC0290_1441 | speE | CDS | 1672956:1673624 + | A1768 B546 C143 | 9.04 | 1.19 | Putative spermidine synthase | 2350 | 3701 |
THC0290_N_0929 | 3prime | 1673625:1673962 + | A1644 B540 C143 | 6.32 | 1.00 | new transcription segment | 2352 | 2990 | |
THC0290_N_0930 | intra | 1675609:1675691 - | A1765 B546 C143 | 8.96 | 2.20 | new transcription segment | 2354 | 3540 | |
THC0290_1444 | CDS | 1675692:1676540 - | A1762 B546 C143 | 10.01 | 2.38 | Protein of unknown function | 2355 | 3424 | |
THC0290_N_0937 | 5prime | 1681345:1681454 - | A1762 B546 C143 | 7.20 | 2.53 | new transcription segment | 2368 | 3420 | |
THC0290_N_0943 | 3prime | 1688545:1688987 - | A122 B50 C18 | 6.89 | -1.56 | new transcription segment | 2382 | 155 | |
THC0290_N_0953 | 3prime | 1704683:1704758 - | A1126 B376 C109 | 9.60 | 1.41 | new transcription segment | 2403 | 2158 | |
THC0290_1472 | rimK | CDS | 1711703:1713076 + | A517 B180 C44 | 10.21 | -1.09 | Ribosomal protein S6 modification protein RimK | 2410 | 693 |
THC0290_1473 | CDS | 1713087:1713590 + | A611 B183 C44 | 10.07 | -1.03 | Probable transmembrane protein of unknown function | 2411 | 1289 | |
THC0290_1478 | CDS | 1717064:1717531 - | A1067 B355 C104 | 11.53 | 1.09 | Protein of unknown function | 2420 | 2037 | |
THC0290_N_0964 | 5prime | 1718789:1718853 - | A1068 B355 C104 | 12.61 | 1.03 | new transcription segment | 2422 | 2039 | |
THC0290_N_0976 | 3prime | 1730076:1730154 - | A1573 B530 C143 | 8.07 | 2.05 | new transcription segment | 2449 | 2842 | |
THC0290_1494 | CDS | 1730155:1732128 - | A1761 B546 C143 | 10.69 | 1.50 | Probable ribonuclease | 2450 | 3382 | |
THC0290_N_0977 | 5prime | 1732129:1732257 - | A1768 B546 C143 | 10.04 | 1.52 | new transcription segment | 2451 | 3627 | |
THC0290_N_0978 | 5prime | 1732259:1732334 - | A1762 B546 C143 | 8.70 | 1.25 | new transcription segment | 2452 | 3417 | |
THC0290_1500 | CDS | 1741823:1742491 + | A1035 B342 C102 | 10.53 | 2.12 | Two-component system response regulatory protein, LuxR family | 2462 | 1991 | |
THC0290_N_0984 | 3prime | 1742492:1742714 + | A1035 B342 C102 | 10.42 | 1.63 | new transcription segment | 2463 | 1993 | |
THC0290_1501 | CDS | 1742715:1743236 + | A1035 B342 C102 | 9.57 | 1.44 | Hypothetical protein | 2464 | 1992 | |
THC0290_1502 | CDS | 1743248:1744315 + | A1035 B342 C102 | 10.53 | 1.95 | Protein of unknown function | 2465 | 1994 | |
THC0290_1503 | CDS | 1744557:1744856 + | A1035 B342 C102 | 10.69 | 2.21 | Probable lipoprotein precursor | 2466 | 1995 | |
THC0290_1506 | CDS | 1747485:1748612 + | A600 B183 C44 | 9.67 | -1.08 | Probable cysteine desulfurase | 2471 | 1102 | |
THC0290_1522 | CDS | 1769814:1770386 - | A852 B256 C70 | 7.53 | -1.93 | Protein of unknown function related to microcin resistance protein McbG | 2494 | 1773 | |
THC0290_N_0995 | intra | 1770510:1770582 - | A1768 B546 C143 | 12.28 | 1.26 | new transcription segment | 2496 | 3736 | |
THC0290_1523 | CDS | 1770583:1770726 - | A1768 B546 C143 | 10.41 | 1.10 | Protein of unknown function | 2497 | 3735 | |
THC0290_N_1004 | 3prime | 1788343:1788481 - | A1665 B542 C143 | 10.12 | 1.69 | new transcription segment | 2517 | 3045 | |
THC0290_1534 | glyA | CDS | 1788482:1789756 - | A1761 B546 C143 | 13.46 | 1.26 | Glycine hydroxymethyltransferase | 2518 | 3381 |
THC0290_1536 | CDS | 1791488:1791967 + | A1619 B535 C143 | 8.99 | 1.15 | Probable transcriptional regulator | 2523 | 2927 | |
THC0290_N_1008 | 3prime | 1791968:1792228 + | A1662 B542 C143 | 6.48 | 1.16 | new transcription segment | 2524 | 3036 | |
THC0290_N_1009 | 3prime | 1792895:1792953 - | A1637 B540 C143 | 6.09 | 1.66 | new transcription segment | 2526 | 2968 | |
THC0290_1538 | CDS | 1792954:1793694 - | A1638 B540 C143 | 11.99 | 2.23 | Probable lipoprotein precursor | 2527 | 2969 | |
THC0290_1539 | CDS | 1793697:1795478 - | A1638 B540 C143 | 11.83 | 2.00 | Probable transmembrane protein of unknown function | 2529 | 2970 | |
THC0290_1540 | CDS | 1795484:1795813 - | A1638 B540 C143 | 11.13 | 1.85 | Probable transcriptional regulator, PadR family | 2530 | 2972 | |
THC0290_N_1011 | intra | 1795814:1796040 - | A1638 B540 C143 | 10.51 | 1.96 | new transcription segment | 2531 | 2975 | |
THC0290_1541 | CDS | 1796041:1796505 - | A1638 B540 C143 | 11.18 | 2.15 | Probable transmembrane protein of unknown function | 2533 | 2973 | |
THC0290_N_1012 | 5prime | 1796506:1796567 - | A1638 B540 C143 | 10.46 | 2.35 | new transcription segment | 2534 | 2971 | |
THC0290_1542 | CDS | 1796696:1797148 + | A1765 B546 C143 | 7.33 | 2.32 | Protein of unknown function | 2535 | 3480 | |
THC0290_1543 | CDS | 1797232:1798140 + | A1765 B546 C143 | 10.10 | 1.14 | Probable nucleoside-diphosphate sugar epimerase | 2537 | 3481 | |
THC0290_N_1014 | Rfp66 | indep | 1798145:1798224 - | A1768 B546 C143 | 6.62 | 1.04 | new transcription segment | 2538 | 3594 |
THC0290_1544 | grpE | CDS | 1798337:1798909 + | A840 B254 C69 | 12.44 | -2.08 | Chaperone protein GrpE | 2539 | 1753 |
THC0290_N_1015 | intra | 1798910:1798967 + | A831 B252 C69 | 4.70 | -1.70 | new transcription segment | 2540 | 1738 | |
THC0290_1545 | dnaJ | CDS | 1798968:1800092 + | A840 B254 C69 | 12.50 | -2.03 | Chaperone protein DnaJ | 2541 | 1754 |
THC0290_N_1017 | intra | 1800118:1800206 + | A839 B254 C69 | 7.16 | -1.97 | new transcription segment | 2542 | 1748 | |
THC0290_1546 | natA | CDS | 1800256:1801176 + | A555 B182 C44 | 10.86 | -1.02 | Probable ABC-type Na(+)-transporting system, ATPase component | 2544 | 802 |
THC0290_1547 | natB | CDS | 1801258:1802562 + | A555 B182 C44 | 10.33 | -1.25 | Probable ABC-type Na(+)-transporting system, permease component | 2546 | 803 |
THC0290_N_1020 | intra | 1802563:1802708 + | A604 B183 C44 | 9.16 | -1.57 | new transcription segment | 2547 | 1213 | |
THC0290_N_1027 | 5prime | 1806085:1806310 - | A1244 B419 C125 | 7.95 | -1.30 | new transcription segment | 2559 | 2350 | |
THC0290_1553 | CDS | 1806266:1806697 + | A309 B116 C33 | 9.40 | -1.07 | NUDIX hydrolase | 2561 | 394 | |
THC0290_1555 | CDS | 1808272:1809813 - | A1779 B546 C143 | 9.95 | 1.05 | Protein of unknown function | 2564 | 3821 | |
THC0290_1556 | CDS | 1810067:1810495 + | A1762 B546 C143 | 11.87 | 1.48 | Protein of unknown function | 2565 | 3397 | |
THC0290_1557 | menF | CDS | 1810503:1811564 + | A1762 B546 C143 | 10.89 | 1.71 | Isochorismate synthase | 2566 | 3387 |
THC0290_N_1031 | 3prime | 1811565:1811830 + | A1643 B540 C143 | 8.25 | 1.39 | new transcription segment | 2568 | 2983 | |
THC0290_1558 | CDS | 1811635:1812084 - | A61 B32 C14 | 11.80 | -1.21 | Protein of unknown function | 2570 | 70 | |
THC0290_N_1034 | 5prime | 1813041:1813103 + | A1777 B546 C143 | 9.92 | 1.53 | new transcription segment | 2572 | 3806 | |
THC0290_N_1036 | 3prime | 1813210:1813321 - | A1124 B375 C109 | 10.27 | 1.21 | new transcription segment | 2574 | 2155 | |
THC0290_1569 | CDS | 1824808:1827336 + | A1796 B549 C143 | 8.00 | 2.84 | Probable TonB-dependent outer membrane siderophore receptor precursor | 2592 | 3877 | |
THC0290_N_1045 | intra | 1828770:1828972 - | A1765 B546 C143 | 8.63 | 1.62 | new transcription segment | 2595 | 3538 | |
THC0290_1571 | CDS | 1828973:1830133 - | A1765 B546 C143 | 9.02 | 1.58 | Protein of unknown function precursor | 2596 | 3551 | |
THC0290_1578 | CDS | 1835452:1835757 + | A1768 B546 C143 | 8.58 | 1.19 | Hypothetical transmembrane protein | 2607 | 3646 | |
THC0290_1585 | CDS | 1841110:1841760 - | A1053 B346 C102 | 11.55 | 1.10 | Probable phosphatase/phosphohexomutase | 2616 | 2018 | |
THC0290_N_1054 | 3prime | 1843478:1843604 + | A1765 B546 C143 | 8.08 | 1.23 | new transcription segment | 2621 | 3497 | |
THC0290_N_1055 | Rfp67 | indep | 1843941:1844015 + | A1765 B546 C143 | 5.43 | 1.06 | new transcription segment | 2623 | 3503 |
THC0290_1590 | gene | 1844029:1844682 - | A1765 B546 C143 | 7.84 | 1.34 | Truncated protein, N-terminal region (fragment) | 2624 | 3488 | |
THC0290_1593 | gene | 1848100:1848249 - | A1765 B546 C143 | 5.54 | 1.26 | Truncated transposase ISNCY family, central region | 2628 | 3508 | |
THC0290_N_1057 | 5prime | 1848250:1848475 - | A1795 B549 C143 | 5.45 | 1.04 | new transcription segment | 2629 | 3871 | |
THC0290_1594 | CDS | 1848581:1850773 - | A1795 B549 C143 | 6.49 | 1.41 | Protein of unknown function | 2630 | 3865 | |
THC0290_1595 | CDS | 1851066:1852952 + | A1762 B546 C143 | 11.60 | 2.70 | Protein of unknown function precursor, putative adhesin | 2631 | 3405 | |
THC0290_N_1058 | intra | 1852953:1853067 + | A1762 B546 C143 | 9.73 | 3.07 | new transcription segment | 2632 | 3406 | |
THC0290_N_1059 | Rfp68 | indep | 1853069:1853412 + | A1762 B546 C143 | 10.45 | 3.67 | new transcription segment | 2633 | 3407 |
THC0290_N_1060 | 3prime | 1853392:1853555 - | A376 B143 C41 | 11.50 | -1.39 | new transcription segment | 2634 | 481 | |
THC0290_1596 | trxB1 | CDS | 1853556:1854503 - | A377 B143 C41 | 11.53 | -1.25 | Thioredoxin-disulfide reductase | 2635 | 483 |
THC0290_N_1061 | intra | 1854522:1854605 - | A926 B287 C78 | 9.19 | -1.32 | new transcription segment | 2636 | 1860 | |
THC0290_1597 | dnaB | CDS | 1854606:1856153 - | A920 B285 C78 | 10.21 | -1.35 | Replicative DNA helicase | 2637 | 1854 |
THC0290_N_1062 | 5prime | 1856154:1856259 - | A926 B287 C78 | 8.34 | -1.69 | new transcription segment | 2638 | 1861 | |
THC0290_N_1064 | intra | 1857289:1857455 - | A585 B183 C44 | 7.92 | -1.92 | new transcription segment | 2640 | 910 | |
THC0290_1599 | CDS | 1857456:1858334 - | A601 B183 C44 | 9.59 | -1.42 | Probable transmembrane protein of unknown function. Predicted permease | 2642 | 1158 | |
THC0290_1600 | (lptF/lptG) | CDS | 1858321:1859406 - | A575 B183 C44 | 9.69 | -1.48 | Probable lipopolysaccharide export system permease protein, lptF/lptG family | 2643 | 852 |
THC0290_1601 | tgt | CDS | 1859480:1860610 - | A575 B183 C44 | 11.71 | -1.28 | Queuine tRNA-ribosyltransferase | 2645 | 853 |
THC0290_N_1072 | 5prime | 1868837:1869005 - | A838 B254 C69 | 9.02 | -1.52 | new transcription segment | 2658 | 1747 | |
THC0290_N_1087 | intra | 1888625:1888779 + | A1207 B415 C124 | 10.49 | -1.34 | new transcription segment | 2693 | 2265 | |
THC0290_N_1088 | 3prime | 1889021:1889095 + | A1207 B415 C124 | 8.60 | -1.58 | new transcription segment | 2695 | 2263 | |
THC0290_1629 | secA | CDS | 1889096:1892446 + | A840 B254 C69 | 12.53 | -1.49 | Preprotein translocase SecA subunit | 2696 | 1752 |
THC0290_1630 | CDS | 1892517:1893479 - | A206 B76 C24 | 14.16 | 2.42 | Protein of unknown function precursor | 2697 | 262 | |
THC0290_1631 | CDS | 1893486:1894529 - | A206 B76 C24 | 14.72 | 2.10 | Probable cytochrome c peroxidase precursor | 2698 | 263 | |
THC0290_N_1090 | 3prime-PT | 1894530:1894615 - | A206 B76 C24 | 11.61 | 2.04 | new transcription segment | 2699 | 261 | |
THC0290_N_1092 | 3prime | 1894616:1894799 - | A206 B76 C24 | 15.86 | 1.94 | new transcription segment | 2701 | 258 | |
THC0290_1632 | CDS | 1894800:1895606 - | A206 B76 C24 | 15.52 | 1.96 | Probable lipoprotein precursor | 2702 | 259 | |
THC0290_N_1093 | intra | 1895607:1895729 - | A206 B76 C24 | 14.68 | 2.15 | new transcription segment | 2703 | 260 | |
THC0290_1633 | CDS | 1895730:1896068 - | A1873 B578 C149 | 12.35 | 1.43 | Protein of unknown function | 2704 | 3975 | |
THC0290_1634 | CDS | 1896238:1896348 + | A1760 B546 C143 | 10.49 | 1.95 | Hypothetical protein | 2705 | 3372 | |
THC0290_N_1094 | 3prime | 1896419:1896833 - | A1665 B542 C143 | 9.12 | 1.40 | new transcription segment | 2706 | 3044 | |
THC0290_1636 | glcD | CDS | 1896834:1898237 - | A237 B84 C26 | 11.18 | 1.25 | (S)-2-hydroxy-acid oxidase | 2708 | 310 |
THC0290_N_1098 | intra | 1902069:1902203 - | A396 B152 C42 | 8.11 | -1.45 | new transcription segment | 2717 | 506 | |
THC0290_1641 | norM | CDS | 1902204:1903583 - | A575 B183 C44 | 8.35 | -1.16 | Multidrug resistance protein norM (Na(+)/drug antiporter) | 2718 | 851 |
THC0290_1648 | CDS | 1911482:1911874 + | A601 B183 C44 | 10.90 | -1.11 | Protein of unknown function | 2732 | 1135 | |
THC0290_1651 | CDS | 1913720:1915354 + | A586 B183 C44 | 11.17 | -1.12 | Probably involved in regulation of translation initiation | 2738 | 913 | |
THC0290_N_1108 | 3prime | 1915355:1915609 + | A858 B259 C70 | 8.09 | -1.19 | new transcription segment | 2739 | 1781 | |
THC0290_1657 | glnA | CDS | 1920647:1922836 - | A961 B305 C84 | 11.42 | -1.75 | Glutamate--ammonia ligase | 2746 | 1903 |
THC0290_N_1112 | 3prime | 1924112:1924383 + | A1765 B546 C143 | 9.73 | 1.64 | new transcription segment | 2749 | 3533 | |
THC0290_tRNA_0030 | tRNA | 1927023:1927100 + | A1768 B546 C143 | 11.80 | 1.82 | transfer RNA-Val | 2755 | 3670 | |
THC0290_1666 | CDS | 1930665:1931180 - | A540 B180 C44 | 12.24 | -1.06 | Probable lipoprotein precursor | 2762 | 753 | |
THC0290_1667 | nusB | CDS | 1931191:1932102 - | A540 B180 C44 | 11.87 | -1.34 | N utilization substance protein B homolog (NusB protein) | 2763 | 754 |
THC0290_N_1120 | 3prime | 1932156:1932279 - | A536 B180 C44 | 9.24 | -1.24 | new transcription segment | 2764 | 732 | |
THC0290_N_1125 | Rfp73 | indep | 1939566:1939699 + | A1768 B546 C143 | 5.70 | 2.78 | new transcription segment | 2771 | 3684 |
THC0290_1675 | CDS | 1943090:1944706 - | A1055 B348 C104 | 8.87 | -1.63 | Probable asparagine synthetase [glutamine-hydrolyzing] | 2775 | 2022 | |
THC0290_1676 | CDS | 1944906:1945355 - | A1768 B546 C143 | 8.82 | 1.17 | Protein of unknown function | 2777 | 3630 | |
THC0290_1689 | pabA | CDS | 1961221:1961793 + | A718 B205 C53 | 9.56 | -1.07 | Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II | 2804 | 1566 |
THC0290_1691 | trpC | CDS | 1962890:1963672 + | A718 B205 C53 | 9.32 | -1.23 | Indole-3-glycerol phosphate synthase | 2807 | 1561 |
THC0290_1692 | trpF | CDS | 1963765:1964379 + | A718 B205 C53 | 8.93 | -1.64 | Phosphoribosylanthranilate isomerase | 2809 | 1562 |
THC0290_1693 | trpB | CDS | 1964392:1965573 + | A715 B202 C53 | 9.79 | -1.31 | Tryptophan synthase, beta subunit | 2810 | 1551 |
THC0290_N_1143 | intra | 1965574:1965769 + | A715 B202 C53 | 9.59 | -1.10 | new transcription segment | 2811 | 1553 | |
THC0290_1694 | trpA | CDS | 1965770:1966531 + | A715 B202 C53 | 9.62 | -1.28 | Tryptophan synthase, alpha subunit | 2813 | 1552 |
THC0290_1703 | CDS | 1976672:1977127 - | A1768 B546 C143 | 9.98 | 1.47 | Hypothetical transmembrane protein | 2829 | 3699 | |
THC0290_N_1150 | intra | 1977128:1977205 - | A1768 B546 C143 | 10.70 | 1.63 | new transcription segment | 2830 | 3702 | |
THC0290_1704 | CDS | 1977206:1977442 - | A1768 B546 C143 | 10.98 | 1.51 | Hypothetical transmembrane protein | 2831 | 3662 | |
THC0290_1705 | CDS | 1978255:1979847 + | A608 B183 C44 | 9.03 | -1.20 | Probable type I modification methyltransferase | 2833 | 1262 | |
THC0290_1706 | CDS | 1979849:1980568 + | A608 B183 C44 | 8.87 | -1.30 | Hypothetical protein | 2834 | 1263 | |
THC0290_1707 | CDS | 1980570:1981727 + | A532 B180 C44 | 8.83 | -1.43 | Probable type I restriction-modification system, DNA specificity domain protein | 2835 | 724 | |
THC0290_1708 | CDS | 1981738:1982421 + | A532 B180 C44 | 8.33 | -1.38 | Hypothetical protein | 2836 | 725 | |
THC0290_1709 | CDS | 1982411:1982950 + | A48 B27 C13 | 7.62 | -1.41 | Protein of unknown function | 2837 | 55 | |
THC0290_N_1153 | intra | 1982951:1983088 + | A1520 B521 C143 | 7.61 | -1.02 | new transcription segment | 2839 | 2753 | |
THC0290_1710 | CDS | 1983089:1985917 + | A600 B183 C44 | 9.08 | -1.03 | Probable type I restriction endonuclease | 2840 | 1088 | |
THC0290_1717 | typA | CDS | 1993758:1995554 - | A801 B244 C67 | 12.52 | -1.80 | GTP-binding protein TypA | 2855 | 1694 |
THC0290_N_1161 | Rfp78 | indep | 1995370:1995588 + | A1768 B546 C143 | 6.39 | 2.58 | new transcription segment | 2856 | 3686 |
THC0290_1718 | rpsT | CDS | 2002916:2003167 - | A786 B238 C67 | 12.91 | -1.37 | 30S ribosomal protein S20 | 2863 | 1673 |
THC0290_N_1163 | 3prime | 2003168:2003329 - | A786 B238 C67 | 13.00 | -1.52 | new transcription segment | 2864 | 1674 | |
THC0290_1720 | CDS | 2005180:2006193 + | A1779 B546 C143 | 12.42 | 1.35 | Hypothetical lipoprotein precursor | 2870 | 3819 | |
THC0290_N_1167 | intra | 2006194:2006263 + | A1779 B546 C143 | 10.47 | 1.67 | new transcription segment | 2871 | 3820 | |
THC0290_1721 | CDS | 2006264:2007796 + | A1779 B546 C143 | 11.26 | 1.31 | Protein of unknown function precursor | 2872 | 3818 | |
THC0290_N_1168 | 3prime | 2007797:2007960 + | A1779 B546 C143 | 11.33 | 1.98 | new transcription segment | 2873 | 3817 | |
THC0290_1722 | CDS | 2008149:2009450 + | A967 B307 C84 | 10.08 | -1.61 | Protein of unknown function | 2874 | 1912 | |
THC0290_1728 | ndk | CDS | 2016173:2016592 + | A542 B180 C44 | 12.75 | -1.21 | Nucleoside-diphosphate kinase | 2883 | 764 |
THC0290_N_1174 | 3prime | 2016593:2016664 + | A933 B292 C81 | 11.18 | -1.71 | new transcription segment | 2884 | 1869 | |
THC0290_1735 | CDS | 2022508:2022927 - | A1768 B546 C143 | 10.79 | 1.39 | Protein of unknown function | 2893 | 3676 | |
THC0290_N_1177 | 5prime | 2022928:2023018 - | A1615 B535 C143 | 9.97 | 1.54 | new transcription segment | 2894 | 2920 | |
THC0290_1736 | CDS | 2023096:2024181 + | A1765 B546 C143 | 7.74 | 1.34 | Probable penicillin-binding protein precursor | 2895 | 3495 | |
THC0290_1753 | CDS | 2040786:2040938 - | A540 B180 C44 | 15.73 | -1.27 | Hypothetical protein | 2924 | 741 | |
THC0290_1754 | rpmG | CDS | 2040948:2041130 - | A540 B180 C44 | 13.89 | -1.44 | 50S ribosomal protein L33 | 2925 | 748 |
THC0290_1755 | rpmB | CDS | 2041157:2041393 - | A540 B180 C44 | 13.35 | -1.48 | 50S ribosomal protein L28 | 2926 | 745 |
THC0290_1761 | CDS | 2045877:2046872 - | A545 B180 C44 | 11.94 | -1.04 | Probable lipoprotein precursor | 2934 | 782 | |
THC0290_1764 | pyrR2 | CDS | 2047921:2048418 + | A1615 B535 C143 | 11.30 | 1.41 | Bifunctional protein : pyrimidine operon regulatory protein and uracil phosphoribosyltransferase | 2937 | 2919 |
THC0290_N_1193 | 3prime | 2048419:2048605 + | A1812 B556 C144 | 9.67 | 1.15 | new transcription segment | 2940 | 3901 | |
THC0290_N_1196 | 3prime | 2049572:2049668 - | A1764 B546 C143 | 9.62 | 1.48 | new transcription segment | 2945 | 3453 | |
THC0290_N_1197 | repeated_region | 2054587:2054964 - | A1248 B419 C125 | 9.97 | 1.73 | new transcription segment | 2951 | 2354 | |
THC0290_1778 | cobS | CDS | 2061052:2061828 - | A585 B183 C44 | 7.01 | -1.27 | Adenosylcobinamide-GDP ribazoletransferase | 2961 | 908 |
THC0290_1779 | bluB/cobT | CDS | 2061863:2063539 - | A314 B119 C33 | 7.43 | -1.68 | Bifunctional protein : cob(II)yrinic acid a,c-diamide reductase and nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | 2962 | 399 |
THC0290_N_1199 | Rfp80 | indep | 2063397:2064482 + | A1779 B546 C143 | 7.74 | 1.22 | new transcription segment | 2963 | 3809 |
THC0290_N_1200 | intra | 2063540:2063723 - | A513 B180 C44 | 8.10 | -1.70 | new transcription segment | 2964 | 685 | |
THC0290_1780 | cobU | CDS | 2063724:2064236 - | A606 B183 C44 | 9.02 | -1.43 | Bifunctional protein cobU : adenosylcobinamide kinase and adenosylcobinamide-phosphate guanylyltransferase | 2966 | 1257 |
THC0290_N_1201 | intra | 2070966:2071017 + | A1621 B537 C143 | 14.33 | 1.29 | new transcription segment | 2974 | 2930 | |
THC0290_N_1207 | intra | 2079135:2079235 - | A1091 B367 C107 | 10.31 | 2.58 | new transcription segment | 2987 | 2111 | |
THC0290_1795 | CDS | 2079236:2080645 - | A1091 B367 C107 | 11.42 | 2.77 | Probable lipoprotein precursor | 2988 | 2110 | |
THC0290_N_1208 | 3prime | 2080646:2081110 - | A1088 B365 C107 | 10.35 | 2.76 | new transcription segment | 2989 | 2092 | |
THC0290_1796 | CDS | 2081111:2082283 - | A1088 B365 C107 | 12.39 | 3.43 | Probable lipoprotein precursor | 2990 | 2106 | |
THC0290_N_1209 | intra | 2082313:2082391 - | A1088 B365 C107 | 7.02 | 3.66 | new transcription segment | 2991 | 2091 | |
THC0290_1797 | CDS | 2082392:2083183 - | A1088 B365 C107 | 10.53 | 4.69 | Protein of unknown function precursor | 2992 | 2090 | |
THC0290_1798 | CDS | 2083190:2083714 - | A1088 B365 C107 | 10.76 | 4.81 | Protein of unknown function containing ankyrin repeat signature | 2993 | 2103 | |
THC0290_1799 | CDS | 2083726:2084730 - | A1088 B365 C107 | 10.79 | 4.62 | Protein of unknown function | 2994 | 2104 | |
THC0290_1800 | CDS | 2084766:2085770 - | A1088 B365 C107 | 11.11 | 4.67 | Protein of unknown function | 2995 | 2105 | |
THC0290_1801 | CDS | 2085799:2087151 - | A1088 B365 C107 | 10.08 | 4.49 | Protein of unknown function | 2996 | 2102 | |
THC0290_1802 | CDS | 2087189:2087410 - | A1088 B365 C107 | 11.03 | 5.12 | Hypothetical protein | 2997 | 2100 | |
THC0290_1803 | apbE | CDS | 2087394:2088356 - | A1088 B365 C107 | 10.41 | 4.76 | Membrane-associated protein involved in thiamine biosynthesis | 2998 | 2101 |
THC0290_1804 | CDS | 2088365:2088802 - | A1088 B365 C107 | 10.15 | 5.06 | Thioredoxin family protein | 2999 | 2081 | |
THC0290_1805 | CDS | 2088958:2090196 + | A1088 B365 C107 | 13.75 | 3.87 | Protein of unknown function | 3000 | 2097 | |
THC0290_N_1210 | intra | 2090197:2090249 + | A1088 B365 C107 | 10.29 | 4.03 | new transcription segment | 3001 | 2093 | |
THC0290_1806 | irpA | CDS | 2090250:2091365 + | A1088 B365 C107 | 14.05 | 3.00 | Iron-regulated protein A precursor | 3002 | 2098 |
THC0290_1807 | CDS | 2091368:2092735 + | A483 B172 C44 | 12.00 | 2.98 | Probable vitamin K-dependent gamma-carboxylase | 3003 | 636 | |
THC0290_1808 | fecA | CDS | 2092716:2095151 + | A483 B172 C44 | 11.25 | 2.09 | ABC-type iron(III) dicitrate-transport system component, TonB-dependent outer membrane receptor FecA precursor | 3004 | 637 |
THC0290_N_1211 | 3prime | 2094693:2095147 - | A153 B59 C19 | 8.96 | 1.26 | new transcription segment | 3005 | 192 | |
THC0290_1809 | CDS | 2095148:2095534 - | A1491 B511 C143 | 10.54 | 1.44 | Acyl-CoA hydrolase family protein | 3006 | 2699 | |
THC0290_1810 | CDS | 2095539:2096027 - | A1491 B511 C143 | 11.38 | 1.57 | Protein of unknown function | 3008 | 2700 | |
THC0290_N_1213 | Rfp81 | indep | 2096135:2096322 - | A1495 B512 C143 | 11.48 | 2.55 | new transcription segment | 3009 | 2710 |
THC0290_1811 | CDS | 2096360:2096578 - | A1088 B365 C107 | 9.24 | 5.72 | Protein of unknown function | 3010 | 2096 | |
THC0290_N_1214 | 3prime | 2096579:2096690 - | A1496 B512 C143 | 11.64 | 6.70 | new transcription segment | 3011 | 2713 | |
THC0290_1812 | (hmuY) | CDS | 2096691:2097335 - | A1088 B365 C107 | 13.45 | 4.79 | Putative heme binding lipoprotein precursor | 3012 | 2089 |
THC0290_1813 | CDS | 2097360:2097836 - | A1088 B365 C107 | 11.92 | 5.60 | Probable transmembrane protein of unknown function | 3013 | 2086 | |
THC0290_1814 | CDS | 2097857:2099929 - | A1088 B365 C107 | 10.71 | 5.32 | Probable TonB-dependent outer membrane receptor precursor | 3014 | 2082 | |
THC0290_1815 | CDS | 2100027:2100941 + | A1088 B365 C107 | 13.05 | 5.43 | Protein of unknown function precursor | 3015 | 2080 | |
THC0290_1816 | CDS | 2100947:2101285 + | A1088 B365 C107 | 12.37 | 6.03 | Protein of unknown function | 3016 | 2087 | |
THC0290_N_1215 | 3prime | 2101286:2101337 + | A1717 B546 C143 | 6.36 | 4.79 | new transcription segment | 3017 | 3163 | |
THC0290_N_1216 | 3prime-PT | 2101338:2101475 + | A1493 B512 C143 | 5.21 | 2.30 | new transcription segment | 3018 | 2708 | |
THC0290_N_1217 | 5prime | 2103281:2103429 + | A1768 B546 C143 | 9.86 | 1.89 | new transcription segment | 3020 | 3624 | |
THC0290_1818 | CDS | 2103430:2107788 + | A1762 B546 C143 | 8.15 | 4.01 | Protein of unknown function precursor, putative adhesin | 3021 | 3404 | |
THC0290_1824 | CDS | 2113997:2115304 - | A1763 B546 C143 | 11.81 | 1.25 | Protein of unknown function | 3028 | 3437 | |
THC0290_1825 | CDS | 2115307:2115978 - | A1763 B546 C143 | 10.97 | 1.18 | Protein of unknown function | 3029 | 3438 | |
THC0290_N_1220 | 5prime | 2117337:2117446 - | A1618 B535 C143 | 10.50 | 1.16 | new transcription segment | 3032 | 2925 | |
THC0290_1828 | htpG | CDS | 2117483:2119381 + | A840 B254 C69 | 12.67 | -1.94 | Chaperone protein HtpG | 3033 | 1756 |
THC0290_1831 | CDS | 2123616:2124782 + | A1765 B546 C143 | 6.32 | 1.33 | Twin-arginine translocation pathway signal sequence domain protein precusor | 3036 | 3494 | |
THC0290_N_1225 | 3prime | 2131021:2131131 - | A1518 B521 C143 | 8.61 | -1.22 | new transcription segment | 3043 | 2749 | |
THC0290_1841 | phoH | CDS | 2141811:2142761 - | A1044 B344 C102 | 12.77 | 1.32 | Phosphate starvation-inducible protein PhoH | 3061 | 2009 |
THC0290_1852 | CDS | 2152138:2154066 + | A1871 B578 C149 | 9.35 | 1.03 | Probable transmembrane protein of unknown function | 3080 | 3973 | |
THC0290_1856 | CDS | 2156568:2157035 - | A1768 B546 C143 | 10.90 | 1.13 | Probable transmembrane protein of unknown function | 3087 | 3694 | |
THC0290_N_1244 | 3prime-PT | 2158851:2159374 - | A1753 B546 C143 | 7.99 | 1.09 | new transcription segment | 3090 | 3350 | |
THC0290_1865 | CDS | 2164658:2165821 - | A1663 B542 C143 | 14.90 | 1.32 | Transposase IS4 family | 3103 | 3039 | |
THC0290_1867 | CDS | 2167096:2167740 - | A581 B183 C44 | 12.84 | -1.27 | Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer | 3107 | 892 | |
THC0290_N_1256 | 5prime | 2172257:2172324 + | A1243 B419 C125 | 10.44 | 1.17 | new transcription segment | 3113 | 2331 | |
THC0290_1870 | CDS | 2172325:2172963 + | A1243 B419 C125 | 10.29 | 1.63 | Protein of unknown function precursor | 3114 | 2330 | |
THC0290_1871 | CDS | 2173083:2173925 - | A330 B122 C33 | 9.66 | -1.09 | Asparaginase 2 | 3116 | 418 | |
THC0290_N_1258 | intra | 2173926:2174028 - | A610 B183 C44 | 8.06 | -1.29 | new transcription segment | 3117 | 1283 | |
THC0290_1872 | cphB | CDS | 2174029:2174901 - | A331 B122 C33 | 10.05 | -1.63 | Cyanophycinase | 3118 | 431 |
THC0290_1874 | pepX2 | CDS | 2177914:2180046 + | A525 B180 C44 | 10.91 | -1.30 | Xaa-Pro dipeptidyl-peptidase precursor | 3122 | 706 |
THC0290_N_1272 | 5prime | 2202131:2202187 - | A1707 B546 C143 | 11.67 | 1.36 | new transcription segment | 3156 | 3128 | |
THC0290_N_1278 | 3prime | 2208899:2209758 - | A1226 B417 C125 | 7.60 | 1.02 | new transcription segment | 3168 | 2296 | |
THC0290_1902 | CDS | 2209759:2210490 - | A1762 B546 C143 | 11.45 | 1.75 | Probable lipoprotein precursor | 3170 | 3415 | |
THC0290_N_1280 | intra | 2210491:2210662 - | A283 B104 C29 | 8.20 | 1.09 | new transcription segment | 3172 | 366 | |
THC0290_1903 | CDS | 2210663:2213119 - | A738 B212 C55 | 9.88 | 1.04 | Probable TonB-dependent outer membrane receptor precursor | 3173 | 1612 | |
THC0290_1904 | CDS | 2213126:2214817 - | A740 B212 C55 | 10.34 | 1.19 | Probable secreted M23/M37 family peptidase precursor | 3174 | 1614 | |
THC0290_1906 | CDS | 2215305:2215598 + | A1614 B535 C143 | 12.37 | 1.12 | Protein of unknown function | 3176 | 2914 | |
THC0290_N_1281 | 5prime | 2215599:2215649 + | A1614 B535 C143 | 11.41 | 1.32 | new transcription segment | 3177 | 2915 | |
THC0290_miscRNA_0049 | Rfp82 | misc_RNA | 2215650:2215756 + | A1768 B546 C143 | 12.14 | 2.63 | 6S-Flavo RNA | 3178 | 3730 |
THC0290_N_1288 | 3prime-PT | 2222573:2222733 - | A1665 B542 C143 | 8.00 | 2.58 | new transcription segment | 3189 | 3047 | |
THC0290_1913 | CDS | 2222771:2223451 - | A1768 B546 C143 | 11.89 | 2.53 | Probable transcriptional regulatory protein, Crp/Fnr family | 3190 | 3678 | |
THC0290_1924 | hemN | CDS | 2233612:2234976 - | A701 B199 C52 | 8.19 | -1.32 | Oxygen-independent coproporphyrinogen III oxidase HemN | 3205 | 1529 |
THC0290_N_1297 | repeated_region | 2239621:2239993 - | A847 B256 C70 | 6.99 | -1.87 | new transcription segment | 3210 | 1767 | |
THC0290_N_1298 | 3prime | 2240124:2240177 - | A297 B110 C31 | 5.53 | -1.80 | new transcription segment | 3211 | 382 |