Differential expression: Phase of growth [Trans.vs.Expo]

Differentially expressed genes in transition phase relative to exponential phase cells growing in TYES medium at 18°C 200 rpm.

List of differentially expressed genomic elements (CDS and newly identified RNA elements).
Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.

Reference samples: T1_a, T1_c
Test samples: T3_a, T3_c

Locus Tag Name (v2) Feature type Location Clusters Base Expr. Delta Expr. Annotation Chromosome order Clusters order
THC0290_0004 folB CDS 4422:4781 - A1762 B546 C143 10.13 1.43 Dihydroneopterin aldolase 8 3414
THC0290_N_0006 Rfp1 indep 5284:5631 - A1248 B419 C125 5.55 1.33 new transcription segment 10 2357
THC0290_0006 CDS 7285:7614 + A1751 B546 C143 13.03 1.16 Hypothetical protein precursor 11 3336
THC0290_0007 CDS 7614:7964 + A1768 B546 C143 13.45 1.49 Probable transmembrane protein of unknown function 12 3719
THC0290_0008 CDS 7968:8222 + A1768 B546 C143 13.33 1.51 Protein of unknown function 13 3720
THC0290_N_0008 3prime-PT 8228:8499 + A1768 B546 C143 6.72 1.83 new transcription segment 15 3687
THC0290_N_0009 intra 9251:9388 - A802 B244 C67 7.01 -1.39 new transcription segment 17 1697
THC0290_N_0010 Rfp2 indep 10630:10929 + A1248 B419 C125 5.40 1.35 new transcription segment 19 2358
THC0290_N_0013 3prime 18031:18294 + A646 B183 C44 10.24 -1.08 new transcription segment 26 1409
THC0290_N_0014 5prime 18906:19034 + A361 B138 C39 5.90 -1.22 new transcription segment 28 462
THC0290_N_0023 3prime 32460:32570 + A1747 B546 C143 6.02 1.14 new transcription segment 46 3264
THC0290_0026 sprF CDS 43183:44154 + A242 B86 C26 13.16 1.33 Putative cell surface protein precursor SprF 49 316
THC0290_0029 elaA CDS 47729:48178 + A1768 B546 C143 9.39 1.34 ElaA protein 55 3677
THC0290_0039 CDS 62669:63382 - A1799 B551 C143 9.93 1.17 Protein of unknown function 74 3886
THC0290_N_0036 5prime 63383:63435 - A1798 B551 C143 10.04 1.42 new transcription segment 75 3885
THC0290_0042 hemB CDS 64879:65871 - A588 B183 C44 10.71 -1.15 Porphobilinogen synthase 80 930
THC0290_N_0045 3prime-PT 78990:79546 + A209 B77 C25 7.76 1.00 new transcription segment 102 268
THC0290_0081 mntH CDS 104165:106036 + A1089 B366 C107 12.52 1.37 Probable manganese transport protein mntH 141 2108
THC0290_N_0062 intra 106037:106329 + A1090 B366 C107 11.80 1.51 new transcription segment 142 2109
THC0290_0082 sirR CDS 106330:106983 + A1072 B359 C105 11.68 1.18 Probable metal-dependent transcriptional regulator 143 2043
THC0290_N_0064 3prime 108949:109046 + A1800 B551 C143 11.00 1.95 new transcription segment 148 3887
THC0290_0093 feoA CDS 121549:121791 + A1494 B512 C143 11.15 1.41 Ferrous iron transport protein A 163 2709
THC0290_0094 feoB CDS 121791:123884 + A1084 B365 C107 10.14 1.22 Ferrous iron transport protein B 164 2074
THC0290_N_0071 intra 123885:124433 + A1084 B365 C107 9.71 1.05 new transcription segment 165 2075
THC0290_0099 CDS 128701:129075 + A422 B163 C44 12.31 -1.01 Protein of unknown function 171 540
THC0290_N_0074 3prime 129899:129947 + A1188 B407 C123 5.29 -1.42 new transcription segment 174 2228
THC0290_N_0075 Rfp8 indep 129929:130108 - A1768 B546 C143 6.35 1.97 new transcription segment 175 3608
THC0290_N_0079 3prime 136118:136225 - A1763 B546 C143 9.73 1.06 new transcription segment 185 3432
THC0290_0110 CDS 140658:140933 - A1768 B546 C143 11.02 1.11 Putative plasmid stabilization system protein 189 3633
THC0290_0111 CDS 140930:141169 - A1768 B546 C143 11.63 1.24 Hypothetical protein 190 3634
THC0290_0116 panC CDS 145223:146071 - A605 B183 C44 10.81 -1.42 Pantoate--beta-alanine ligase 195 1248
THC0290_0122 atpD CDS 155419:156930 + A600 B183 C44 14.14 -1.09 ATP synthase beta subunit 204 1096
THC0290_N_0086 intra 156931:157009 + A639 B183 C44 11.32 -2.07 new transcription segment 205 1387
THC0290_0123 atpC CDS 157010:157291 + A600 B183 C44 14.07 -1.24 ATP synthase epsilon subunit 206 1097
THC0290_N_0088 intra 157872:157951 + A72 B35 C14 8.52 -1.13 new transcription segment 209 83
THC0290_0129 CDS 159979:160953 + A1248 B419 C125 11.80 1.12 Putative outer membrane protein precursor 215 2360
THC0290_0131 CDS 162019:162429 - A598 B183 C44 9.66 -1.54 Protein of unknown function 219 989
THC0290_N_0093 5prime 163655:163724 - A553 B182 C44 8.89 -1.96 new transcription segment 223 798
THC0290_0133 CDS 163777:164133 - A304 B113 C32 8.87 -1.53 Protein of unknown function 224 389
THC0290_N_0094 5prime 164134:164212 - A305 B113 C32 7.89 -1.26 new transcription segment 225 390
THC0290_N_0095 repeated_region 164214:164791 - A676 B189 C46 7.66 -1.64 new transcription segment 226 1458
THC0290_0136 batD CDS 166703:168505 - A677 B189 C46 10.58 -1.24 BatD protein 231 1467
THC0290_N_0099 intra 171177:171320 - A677 B189 C46 10.78 -1.49 new transcription segment 235 1464
THC0290_0139 CDS 171321:171701 - A677 B189 C46 10.42 -1.14 Protein of unknown function 236 1462
THC0290_0140 batA CDS 171756:172757 - A677 B189 C46 10.79 -1.44 BatA protein 238 1460
THC0290_0141 CDS 172759:174345 - A677 B189 C46 10.72 -1.32 Probable transmembrane protein of unknown function 239 1459
THC0290_0142 CDS 176106:176972 - A545 B180 C44 11.93 -1.85 Protein of unknown function 241 770
THC0290_N_0102 intra 176973:177041 - A545 B180 C44 12.66 -1.75 new transcription segment 242 771
THC0290_0143 CDS 177042:178046 - A853 B257 C70 12.10 -1.65 ATPase, MoxR family 243 1774
THC0290_N_0103 5prime 178047:178088 - A853 B257 C70 9.53 -1.85 new transcription segment 244 1775
THC0290_0144 CDS 178131:179366 + A1107 B371 C109 9.31 1.49 Protein of unknown function, putative transcriptional regulator 245 2131
THC0290_0147 phnA CDS 180747:181328 + A515 B180 C44 10.76 -1.08 PhnA protein 249 687
THC0290_N_0107 Rfp11 indep 182563:182671 + A1768 B546 C143 4.86 1.85 new transcription segment 253 3598
THC0290_N_0108 3prime 182582:182666 - A793 B241 C67 4.88 -1.24 new transcription segment 254 1682
THC0290_tRNA_0003 tRNA 191432:191514 + A1769 B546 C143 12.42 2.62 transfer RNA-Leu 265 3761
THC0290_0157 CDS 194650:195750 + A1765 B546 C143 8.64 1.03 Probable transmembrane protein of unknown function 272 3507
THC0290_N_0126 intra 202620:202692 - A611 B183 C44 10.25 -1.04 new transcription segment 280 1291
THC0290_N_0129 Rfp13 indep 208062:208134 - A1769 B546 C143 12.32 5.68 new transcription segment 287 3741
THC0290_N_0130 Rfp14 indep 208381:208488 + A1765 B546 C143 8.31 1.00 new transcription segment 288 3520
THC0290_N_0132 3prime 210722:211077 - A576 B183 C44 8.86 -1.06 new transcription segment 292 855
THC0290_0169 CDS 212865:213590 - A544 B180 C44 11.01 -1.24 Glycosyl transferase, group 2 family protein 296 766
THC0290_0172 CDS 216630:217619 - A1083 B365 C107 14.50 1.14 Probable cell surface protein (Leucine-rich repeat protein) precursor 300 2071
THC0290_0178 CDS 224965:225888 - A1083 B365 C107 14.24 1.15 Probable cell surface protein (Leucine-rich repeat protein) precursor 308 2067
THC0290_0182 CDS 230123:231112 - A1083 B365 C107 13.02 4.09 Probable cell surface protein (Leucine-rich repeat protein) precursor 313 2056
THC0290_0183 CDS 231127:232047 - A1083 B365 C107 14.12 2.73 Probable cell surface protein (Leucine-rich repeat protein) precursor 314 2057
THC0290_0184 CDS 232062:233117 - A1083 B365 C107 12.98 3.18 Probable cell surface protein (Leucine-rich repeat protein) precursor 315 2058
THC0290_0185 CDS 233132:234121 - A1088 B365 C107 11.76 6.23 Probable cell surface protein (Leucine-rich repeat protein) precursor 316 2088
THC0290_0186 CDS 234136:235122 - A1088 B365 C107 12.66 3.75 Probable cell surface protein (Leucine-rich repeat protein) precursor 317 2085
THC0290_0188 CDS 236394:237143 + A540 B180 C44 12.19 -2.15 Protein of unknown function 319 750
THC0290_N_0144 intra 237144:237208 + A586 B183 C44 11.19 -1.86 new transcription segment 320 914
THC0290_0189 CDS 237209:237979 + A587 B183 C44 9.87 -1.88 Enoyl-CoA hydratase/isomerase family protein 321 917
THC0290_N_0146 3prime 237980:238652 + A576 B183 C44 7.69 -1.80 new transcription segment 323 858
THC0290_0200 CDS 250231:250752 + A1715 B546 C143 11.13 1.28 Hypothetical protein 340 3158
THC0290_0201 CDS 250719:251186 - A1765 B546 C143 8.97 1.29 Adenylate cyclase family protein 341 3466
THC0290_N_0155 5prime 251187:251301 - A1768 B546 C143 9.07 1.66 new transcription segment 343 3653
THC0290_N_0159 intra 254489:254544 - A601 B183 C44 8.62 -1.90 new transcription segment 349 1119
THC0290_0204 rnhA CDS 254545:255024 - A601 B183 C44 8.67 -2.15 Ribonuclease HI 350 1182
THC0290_0205 purN CDS 255026:255595 - A526 B180 C44 8.95 -1.74 Phosphoribosylglycinamide formyltransferase 351 711
THC0290_0208 rnc CDS 257618:258358 + A600 B183 C44 10.39 -1.29 Ribonuclease III 357 1113
THC0290_N_0164 intra 258359:258452 + A601 B183 C44 10.11 -1.25 new transcription segment 358 1120
THC0290_N_0167 intra 261251:261325 - A50 B27 C13 8.82 -1.92 new transcription segment 363 57
THC0290_0212 CDS 261326:261682 - A609 B183 C44 8.56 -2.17 Protein of unknown function MmcQ 364 1271
THC0290_0213 CDS 261688:262440 - A609 B183 C44 9.12 -1.99 Probable arylformamidase 365 1281
THC0290_0214 CDS 262521:263654 - A609 B183 C44 8.68 -2.42 Probable coproporphyrinogen oxidase 366 1280
THC0290_0216 CDS 264266:265192 + A549 B181 C44 7.17 -1.02 Probable transmembrane protein of unknown function 369 791
THC0290_0217 CDS 265180:266289 + A549 B181 C44 7.28 -1.05 Glycosyl transferase, group 2 family protein 370 792
THC0290_0220 CDS 267649:268050 - A1790 B549 C143 9.96 1.30 Hypothetical protein 376 3842
THC0290_N_0171 intra 268051:268199 - A1790 B549 C143 11.40 1.52 new transcription segment 377 3845
THC0290_0221 CDS 268200:268898 - A1790 B549 C143 11.70 1.47 Protein of unknown function precursor 378 3844
THC0290_0222 CDS 268913:269659 - A1762 B546 C143 10.76 1.69 Protein of unknown function precursor 379 3403
THC0290_0223 ileS CDS 269844:273245 + A544 B180 C44 11.10 -2.74 Isoleucine--tRNA ligase 380 767
THC0290_0224 dksA CDS 273252:273632 + A856 B258 C70 11.89 -1.86 DnaK suppressor protein 381 1779
THC0290_N_0172 5prime 273673:273853 + A834 B252 C69 6.64 -1.56 new transcription segment 382 1741
THC0290_N_0173 3prime 274351:274462 - A1313 B452 C133 5.99 1.01 new transcription segment 384 2455
THC0290_N_0178 intra 284615:284739 + A1125 B375 C109 13.27 1.59 new transcription segment 397 2156
THC0290_0237 fpp1 CDS 288547:291963 - A1062 B352 C104 10.08 4.18 Psychrophilic metalloprotease Fpp1 precursor 403 2030
THC0290_N_0181 3prime 292028:292069 - A1100 B369 C108 4.71 1.64 new transcription segment 404 2121
THC0290_0238 fpp2 CDS 292070:294898 - A1062 B352 C104 12.51 1.88 Psychrophilic metalloprotease Fpp2 precursor 405 2031
THC0290_0240 bioB CDS 296279:297367 + A600 B183 C44 11.74 -1.43 Biotin synthase 408 1050
THC0290_0241 CDS 297417:297623 - A1450 B502 C142 12.16 1.03 Biotin synthase 409 2641
THC0290_N_0185 5prime 297877:297936 - A1769 B546 C143 9.77 2.38 new transcription segment 412 3751
THC0290_0242 CDS 297963:298367 - A1768 B546 C143 10.14 2.07 Probable lyase 413 3625
THC0290_N_0189 intra 304144:304193 - A678 B190 C47 8.92 1.16 new transcription segment 425 1469
THC0290_N_0194 5prime 311635:311701 - A719 B205 C53 8.03 -1.56 new transcription segment 435 1567
THC0290_0256 aspC3 CDS 311724:312935 - A719 B205 C53 8.17 -1.68 Probable aspartate transaminase AspC3 436 1568
THC0290_0257 pheA CDS 312932:313768 - A719 B205 C53 8.04 -1.20 Prephenate dehydratase 437 1569
THC0290_N_0196 intra 315768:315824 + A292 B108 C30 7.47 -1.01 new transcription segment 441 377
THC0290_0261 CDS 317564:318664 - A726 B207 C54 6.09 -1.38 Homoserine dehydrogenase 445 1583
THC0290_0262 metX CDS 318651:319652 - A726 B207 C54 5.86 -1.77 Homoserine O-acetyltransferase 446 1584
THC0290_0263 metY CDS 319731:321023 - A726 B207 C54 6.20 -1.74 Probable O-acetylhomoserine aminocarboxypropyltransferase 447 1585
THC0290_0272 CDS 329944:330672 + A1396 B479 C139 6.63 -1.04 Hypothetical protein 461 2570
THC0290_0275 CDS 332899:333825 - A1862 B574 C149 11.42 1.15 Protein of unknown function 466 3961
THC0290_0276 CDS 334046:334363 - A1709 B546 C143 13.55 1.04 Thioredoxin family protein 468 3133
THC0290_N_0208 3prime 335720:335801 - A329 B122 C33 12.13 -1.07 new transcription segment 471 417
THC0290_0284 CDS 338926:340089 + A1663 B542 C143 14.86 1.27 Transposase IS4 family 478 3041
THC0290_0286 CDS 340851:343562 + A312 B118 C33 5.75 -1.10 Protein of unknown function precursor 481 397
THC0290_0287 metK CDS 343737:344987 - A854 B257 C70 12.02 -1.95 Methionine adenosyltransferase 484 1776
THC0290_N_0210 5prime 344988:345117 - A855 B257 C70 11.35 -1.63 new transcription segment 485 1778
THC0290_miscRNA_0001 misc_RNA 345053:345113 - A855 B257 C70 11.37 -1.84 SAM-II long loop 486 1777
THC0290_N_0214 3prime 351138:351301 + A1655 B542 C143 11.39 1.41 new transcription segment 492 3025
THC0290_0294 aspS CDS 353314:355065 + A605 B183 C44 11.82 -1.61 Aspartate--tRNA ligase 495 1250
THC0290_N_0217 3prime 355417:355516 - A1643 B540 C143 9.04 1.29 new transcription segment 498 2985
THC0290_0296 CDS 355517:355957 - A1768 B546 C143 9.83 1.36 Probable cytosine/adenosine deaminase 499 3623
THC0290_0300 CDS 361814:364573 - A1062 B352 C104 11.27 1.25 Probable M36 fungalysin family metalloprotease precursor 505 2029
THC0290_0306 CDS 372055:372684 - A1049 B346 C102 9.79 1.09 Probable polysaccharide deacetylase 513 2014
THC0290_0307 CDS 372841:373998 - A208 B77 C25 10.47 1.53 Probable ABC-type transport system, permease component 514 267
THC0290_0308 CDS 373995:374993 - A1099 B369 C108 11.19 1.45 Probable ABC-type transport system, membrane fusion efflux lipoprotein precursor component 515 2120
THC0290_0309 CDS 375002:376381 - A1760 B546 C143 10.90 1.52 Probable outer membrane efflux protein precursor 516 3373
THC0290_0310 CDS 376525:379755 - A939 B296 C82 12.12 1.24 Probable transmembrane protein of unknown function 518 1876
THC0290_0312 yggG CDS 381240:382067 + A1762 B546 C143 13.41 1.20 Putative secreted M48 family metalloprotease YggG precursor 523 3398
THC0290_0314 lysC CDS 382824:384077 + A1118 B373 C109 12.46 1.04 Aspartate kinase 526 2148
THC0290_0316 CDS 387602:388201 + A1040 B344 C102 13.79 2.38 Hypothetical protein precursor 528 2001
THC0290_N_0230 intra 388202:388287 + A1040 B344 C102 13.18 2.76 new transcription segment 529 2002
THC0290_N_0235 3prime 393012:393683 - A127 B53 C18 7.29 -1.02 new transcription segment 538 160
THC0290_N_0243 5prime 400566:400739 + A1763 B546 C143 8.57 1.04 new transcription segment 554 3445
THC0290_N_0248 Rfp25 indep 418605:418919 + A1760 B546 C143 10.86 4.08 new transcription segment 566 3379
THC0290_0343 gene 420014:422260 - A373 B141 C39 7.34 -1.08 Protein of unknown function precursor (fragment) 570 477
THC0290_0350 ppa CDS 430070:430600 + A600 B183 C44 13.03 -1.25 Inorganic diphosphatase 584 1090
THC0290_0357 rimM CDS 440423:440947 + A600 B183 C44 11.60 -1.79 16S rRNA processing protein RimM 595 1111
THC0290_N_0262 intra 440948:441076 + A600 B183 C44 10.77 -2.04 new transcription segment 596 1112
THC0290_0358 yfiC CDS 441077:441781 + A600 B183 C44 9.49 -2.43 Protein of unknown function YfiC 597 1057
THC0290_N_0263 3prime-PT 441466:441936 - A1760 B546 C143 8.50 2.11 new transcription segment 598 3375
THC0290_0360 gmk CDS 443282:443857 - A596 B183 C44 10.39 -1.14 Guanylate kinase 602 983
THC0290_N_0267 5prime 446871:447017 + A1762 B546 C143 10.38 1.82 new transcription segment 607 3396
THC0290_0365 CDS 447018:447473 + A1762 B546 C143 10.27 1.21 Protein of unknown function 608 3385
THC0290_N_0268 intra 447474:447645 + A1762 B546 C143 10.68 1.23 new transcription segment 609 3386
THC0290_N_0269 3prime-PT 448689:448837 - A1795 B549 C143 6.55 2.33 new transcription segment 612 3859
THC0290_N_0271 3prime 448838:448909 - A1795 B549 C143 7.51 3.44 new transcription segment 614 3861
THC0290_0367 CDS 448910:449260 - A1795 B549 C143 10.13 3.17 Protein of unknown function precursor 616 3860
THC0290_0368 CDS 449469:450680 - A1670 B542 C143 8.46 1.31 Probable lipoprotein precursor 617 3060
THC0290_0369 CDS 450870:453704 - A1670 B542 C143 7.76 1.43 Probable TonB-dependent outer membrane receptor precursor 618 3061
THC0290_0372 oprP CDS 455757:457094 + A1492 B512 C143 10.87 3.22 Probable phosphate-selective porin precursor 621 2706
THC0290_0373 pstS CDS 457114:457947 + A1492 B512 C143 11.74 3.73 ABC-type phosphate-transport system, binding protein precursor component PstS 622 2707
THC0290_N_0274 intra 457948:458037 + A1492 B512 C143 8.65 3.33 new transcription segment 623 2705
THC0290_0374 pstC CDS 458038:459189 + A1492 B512 C143 11.19 3.71 ABC-type phosphate-transport system, permease component PstC 624 2701
THC0290_0375 pstA CDS 459193:460137 + A1492 B512 C143 10.77 3.19 ABC-type phosphate-transport system, permease component PstA 625 2702
THC0290_0376 pstB CDS 460164:460922 + A1492 B512 C143 11.19 2.81 ABC-type phosphate-transport system, ATPase component PstB 626 2703
THC0290_0377 phoU CDS 460961:461689 + A1492 B512 C143 11.23 2.93 Phosphate transport system protein PhoU 627 2704
THC0290_0379 CDS 462838:463659 - A1670 B542 C143 7.36 1.96 Protein of unknown function 629 3062
THC0290_0381 CDS 464505:465146 + A861 B260 C70 9.79 -1.03 Probable transmembrane protein of unknown function. Putative amino-acid efflux protein 632 1785
THC0290_0385 actB CDS 467677:470706 + A601 B183 C44 13.63 -1.35 Alternative complex III, protein B precursor 640 1191
THC0290_N_0280 intra 470707:470799 + A424 B163 C44 11.38 -1.44 new transcription segment 641 545
THC0290_0386 actC CDS 470800:472206 + A601 B183 C44 13.73 -1.06 Alternative complex III, protein C 642 1196
THC0290_0387 actD CDS 472213:472737 + A601 B183 C44 13.78 -1.07 Alternative complex III, protein D 643 1197
THC0290_0388 actE CDS 472746:473291 + A601 B183 C44 13.80 -1.17 Alternative complex III, protein E precursor 644 1195
THC0290_0389 actF CDS 473317:474762 + A601 B183 C44 13.66 -1.23 Alternative complex III, protein F 645 1193
THC0290_0390 ctaC CDS 474781:475953 + A601 B183 C44 13.71 -1.12 Cytochrome c oxidase, subunit II 646 1194
THC0290_0394 CDS 479629:481770 + A605 B183 C44 10.89 -1.14 Protein of unknown function precursor, putative S46 family serine protease 652 1216
THC0290_0396 CDS 482475:482840 - A1161 B397 C120 6.12 -1.94 Protein of unknown function 657 2196
THC0290_0398 CDS 486474:486992 + A1618 B535 C143 14.93 1.42 Protein of unknown function precursor 661 2924
THC0290_N_0298 3prime-PT 500352:500565 - A1760 B546 C143 8.03 2.47 new transcription segment 682 3376
THC0290_N_0301 intra 500882:501008 - A609 B183 C44 11.05 -1.45 new transcription segment 685 1279
THC0290_0410 fabD CDS 501009:501881 - A609 B183 C44 10.79 -1.73 Malonyl CoA-acyl carrier protein transacylase 686 1282
THC0290_N_0303 intra 501925:502073 - A587 B183 C44 8.34 -1.25 new transcription segment 687 920
THC0290_0416 gidB CDS 506352:506981 + A1760 B546 C143 9.97 1.07 Methyltransferase GidB 695 3370
THC0290_N_0304 3prime 506982:507043 + A1552 B523 C143 5.95 1.45 new transcription segment 696 2806
THC0290_0418 apaG CDS 509450:509836 - A1702 B546 C143 12.61 1.26 Protein ApaG 700 3120
THC0290_0429 CDS 521589:522020 + A1509 B519 C143 8.92 1.73 Hypothetical transmembrane protein 712 2728
THC0290_N_0309 3prime 522021:522213 + A1509 B519 C143 9.98 2.67 new transcription segment 713 2729
THC0290_N_0310 3prime-PT 522214:522414 + A771 B233 C66 8.64 1.24 new transcription segment 714 1656
THC0290_0430 CDS 522415:524397 + A1765 B546 C143 10.35 1.63 Cation-transporting ATPase, P-type 715 3539
THC0290_N_0311 intra 524398:524889 + A1765 B546 C143 8.12 1.48 new transcription segment 716 3534
THC0290_miscRNA_0002 misc_RNA 524890:524985 + A1765 B546 C143 9.79 1.63 TPP riboswitch [THI element] 717 3484
THC0290_N_0312 intra 524986:525051 + A729 B209 C54 9.55 1.42 new transcription segment 718 1595
THC0290_N_0322 3prime 539143:539314 - A1872 B578 C149 8.71 1.66 new transcription segment 740 3974
THC0290_0447 CDS 542738:543226 - A1122 B375 C109 10.79 1.35 Acetyltransferase, GNAT family 744 2152
THC0290_0451 ilvH CDS 546976:547506 - A1197 B412 C124 6.36 -1.31 Acetolactate synthase, small subunit 748 2239
THC0290_0452 ilvB CDS 547513:549207 - A1197 B412 C124 5.93 -1.59 Acetolactate synthase, large subunit 749 2242
THC0290_0453 ilvD CDS 549225:550901 - A1197 B412 C124 6.28 -1.08 Dihydroxy-acid dehydratase 750 2240
THC0290_0454 ilvE CDS 550915:551790 - A1196 B412 C124 5.49 -1.30 Branched-chain-amino-acid transaminase 751 2237
THC0290_N_0328 3prime-PT 553432:553812 + A87 B41 C15 8.37 1.64 new transcription segment 756 103
THC0290_0457 tsf CDS 554438:555262 - A599 B183 C44 13.36 -2.20 Elongation factor Ts (EF-Ts) 758 1008
THC0290_N_0331 intra 555263:555363 - A599 B183 C44 12.69 -2.59 new transcription segment 759 1009
THC0290_0458 rpsB CDS 555364:556164 - A638 B183 C44 14.21 -1.52 30S ribosomal protein S2 760 1381
THC0290_N_0332 intra 556165:556317 - A638 B183 C44 14.86 -1.52 new transcription segment 761 1382
THC0290_0459 rpsI CDS 556318:556704 - A638 B183 C44 14.72 -1.14 30S ribosomal protein S9 762 1380
THC0290_0460 rplM CDS 556704:557159 - A886 B275 C75 14.46 -1.14 50S ribosomal protein L13 763 1812
THC0290_0467 CDS 564213:565787 - A522 B180 C44 8.77 -1.11 Probable membrane associated S41A family C-terminal processing peptidase 776 700
THC0290_0468 CDS 565861:566289 - A432 B164 C44 9.89 -1.24 dCMP deaminase 778 556
THC0290_N_0339 3prime-PT 567081:567646 - A1760 B546 C143 6.58 3.09 new transcription segment 782 3374
THC0290_0471 uspA CDS 567685:568509 - A1042 B344 C102 14.33 1.78 Universal stress protein UspA 784 2005
THC0290_N_0342 5prime 568510:568559 - A1042 B344 C102 13.22 1.65 new transcription segment 785 2006
THC0290_N_0343 5prime 568633:568691 + A962 B306 C84 5.70 -1.35 new transcription segment 786 1904
THC0290_0472 CDS 568692:569156 + A784 B238 C67 12.21 -1.57 Protein of unknown function 787 1670
THC0290_0473 nusA CDS 569172:570413 + A639 B183 C44 12.79 -1.52 Transcription elongation protein NusA 788 1390
THC0290_N_0344 intra 570414:570466 + A639 B183 C44 13.75 -1.59 new transcription segment 789 1391
THC0290_0474 infB CDS 570467:573370 + A599 B183 C44 12.69 -1.47 Translation initiation factor IF-2 790 1001
THC0290_N_0347 intra 579956:580112 + A637 B183 C44 14.31 -1.24 new transcription segment 797 1375
THC0290_0475 gene 580335:580526 - A1765 B546 C143 8.10 1.48 Transposase (fragment) 799 3490
THC0290_N_0348 5prime 580527:580629 - A1765 B546 C143 8.68 2.21 new transcription segment 800 3458
THC0290_0478 CDS 582060:583262 + A331 B122 C33 11.00 -1.04 Transposase IS256 family 803 421
THC0290_0486 CDS 591334:592536 - A331 B122 C33 10.99 -1.13 Transposase IS256 family 816 424
THC0290_0487 CDS 592935:594287 + A841 B255 C69 11.53 -1.39 Protein of unknown function 817 1757
THC0290_0488 CDS 594274:594957 + A841 B255 C69 10.62 -1.19 Protein of unknown function 818 1758
THC0290_N_0355 intra 594958:595161 + A866 B262 C70 9.65 -1.04 new transcription segment 819 1790
THC0290_0489 CDS 595162:596364 + A331 B122 C33 10.94 -1.07 Transposase IS256 family 820 422
THC0290_0498 CDS 603925:604707 - A1092 B367 C107 8.11 1.13 Hypothetical lipoprotein precursor 833 2112
THC0290_N_0360 3prime-PT 604737:605191 - A1093 B367 C107 9.19 1.12 new transcription segment 834 2114
THC0290_0501 CDS 607701:608105 - A1756 B546 C143 10.26 1.33 Hypothetical lipoprotein precursor 837 3359
THC0290_0502 CDS 608390:609994 + A1765 B546 C143 7.68 1.11 Transposase IS1182 family 839 3528
THC0290_N_0363 repeated_region 609996:610101 - A1765 B546 C143 10.62 1.36 new transcription segment 840 3535
THC0290_0503 CDS 610102:610602 - A1765 B546 C143 9.65 1.59 Protein of unknown function precursor 841 3544
THC0290_N_0364 5prime 610603:610665 - A1764 B546 C143 10.47 2.22 new transcription segment 842 3452
THC0290_0504 CDS 611442:612659 + A1765 B546 C143 8.58 1.21 Probable transposase 843 3543
THC0290_N_0365 5prime 612761:612929 + A1762 B546 C143 9.70 2.16 new transcription segment 844 3416
THC0290_0505 CDS 612930:613817 + A1593 B534 C143 8.01 1.20 Protein of unknown function 845 2867
THC0290_N_0366 intra 613818:613961 + A1818 B557 C145 7.06 2.22 new transcription segment 846 3909
THC0290_0506 CDS 613962:614243 + A1415 B488 C140 5.98 2.13 Protein of unknown function 847 2590
THC0290_0507 gene 614341:614829 + A1415 B488 C140 4.85 1.47 Truncated protein of unknown function, N-terminal region 848 2591
THC0290_N_0367 repeated_region 614486:614829 - A1768 B546 C143 4.85 1.55 new transcription segment 849 3600
THC0290_0517 CDS 634225:634386 - A1765 B546 C143 7.97 1.50 Hypothetical protein 864 3514
THC0290_N_0373 intra 634387:634452 - A1765 B546 C143 10.86 1.68 new transcription segment 865 3513
THC0290_0518 CDS 634453:634626 - A1765 B546 C143 10.58 1.44 Conserved protein of unknown function 866 3512
THC0290_N_0374 intra 634627:634806 - A1765 B546 C143 9.41 1.66 new transcription segment 867 3511
THC0290_N_0376 3prime 640464:640566 - A1765 B546 C143 11.74 1.21 new transcription segment 875 3536
THC0290_0525 CDS 640567:641241 - A1765 B546 C143 11.50 1.54 Hypothetical protein 876 3554
THC0290_0526 CDS 642217:643776 + A1765 B546 C143 7.39 1.14 Transposase IS1182 family 878 3529
THC0290_0527 CDS 643868:645070 + A331 B122 C33 10.99 -1.10 Transposase IS256 family 879 425
THC0290_N_0384 repeated_region 651641:651988 - A1765 B546 C143 10.48 1.21 new transcription segment 893 3459
THC0290_N_0385 repeated_region 653491:653740 - A1765 B546 C143 10.96 1.47 new transcription segment 896 3462
THC0290_0540 CDS 656981:657529 - A1760 B546 C143 11.62 1.28 Hypothetical protein 903 3377
THC0290_N_0390 Rfp30 indep 658610:658815 + A1762 B546 C143 9.44 2.71 new transcription segment 906 3412
THC0290_N_0393 repeated_region 661643:662054 - A1766 B546 C143 11.19 1.21 new transcription segment 911 3563
THC0290_N_0396 intra 668261:668748 - A1765 B546 C143 7.37 1.65 new transcription segment 921 3545
THC0290_0550 CDS 668749:669369 - A1765 B546 C143 9.35 1.35 Protein of unknown function 922 3546
THC0290_N_0398 5prime 673140:674020 - A1765 B546 C143 9.48 1.09 new transcription segment 925 3547
THC0290_N_0399 repeated_region 675385:675715 - A1765 B546 C143 10.41 1.09 new transcription segment 928 3460
THC0290_0554 CDS 675716:676768 - A852 B256 C70 7.85 -1.05 Hypothetical protein precursor 929 1772
THC0290_N_0400 repeated_region 676790:676957 - A850 B256 C70 8.00 -1.08 new transcription segment 930 1770
THC0290_N_0401 repeated_region 679945:680245 - A1765 B546 C143 10.47 1.17 new transcription segment 934 3461
THC0290_N_0405 intra 686402:686639 - A54 B29 C13 7.67 -1.10 new transcription segment 944 62
THC0290_N_0407 repeated_region 687604:688071 + A1768 B546 C143 5.04 2.01 new transcription segment 947 3731
THC0290_N_0408 repeated_region 689263:689589 - A1765 B546 C143 10.77 1.00 new transcription segment 949 3463
THC0290_N_0410 repeated_region 693406:693624 - A842 B255 C69 10.61 -1.35 new transcription segment 954 1760
THC0290_0569 CDS 693625:694329 - A842 B255 C69 10.67 -1.18 Protein of unknown function 955 1759
THC0290_0571 CDS 696067:696396 - A1580 B530 C143 12.80 1.03 Hypothetical protein 958 2851
THC0290_N_0413 intra 696660:696739 - A1732 B546 C143 7.89 -1.15 new transcription segment 960 3202
THC0290_0572 CDS 696740:697474 - A1200 B413 C124 7.12 -1.62 Hypothetical lipoprotein precursor 961 2252
THC0290_0573 CDS 697763:698500 - A1200 B413 C124 7.83 -1.82 Hypothetical protein 963 2253
THC0290_0575 CDS 700331:701341 - A1201 B413 C124 9.32 -1.41 Transposase IS3 family 967 2254
THC0290_0581 CDS 707782:708492 + A1765 B546 C143 9.54 1.70 Protein of unknown function 979 3501
THC0290_N_0423 3prime 708013:708480 - A1222 B417 C125 6.69 1.36 new transcription segment 980 2290
THC0290_0582 CDS 708481:710181 - A1103 B371 C109 9.92 1.92 Protein of unknown function containing peptidoglycan binding domain 981 2127
THC0290_N_0424 3prime 708493:708688 + A1645 B540 C143 8.02 1.20 new transcription segment 982 2997
THC0290_0583 yitI CDS 710191:710622 - A1243 B419 C125 9.38 1.63 Acetyltransferase, GNAT family, YitI 984 2327
THC0290_N_0426 3prime-PT 710623:710986 - A1037 B342 C102 7.13 3.06 new transcription segment 985 1997
THC0290_0584 pepE CDS 711012:711719 - A1035 B342 C102 10.53 1.61 Dipeptidase E 988 1990
THC0290_0585 CDS 711836:712555 + A1348 B467 C136 7.54 -1.42 Protein of unknown function precursor 989 2501
THC0290_0588 CDS 715514:716959 - A552 B181 C44 9.31 -1.48 Probable amino acid-transporting permease 993 796
THC0290_0590 CDS 718261:719187 + A576 B183 C44 7.39 -1.56 Putative 4Fe-4S binding protein 996 854
THC0290_0594 CDS 729775:729990 + A599 B183 C44 10.13 -1.63 Conserved protein of unknown function 1002 1021
THC0290_N_0434 3prime 729991:730208 + A601 B183 C44 11.38 -1.40 new transcription segment 1003 1129
THC0290_N_0435 intra 730209:730951 + A318 B119 C33 10.53 -1.80 new transcription segment 1004 404
THC0290_0597 deoC CDS 731804:732547 + A600 B183 C44 10.32 -1.23 Deoxyribose-phosphate aldolase 1008 1051
THC0290_N_0444 3prime 745438:745510 - A1762 B546 C143 13.97 2.71 new transcription segment 1028 3393
THC0290_0611 CDS 745511:745864 - A1762 B546 C143 12.63 2.53 Protein of unknown function 1029 3392
THC0290_0618 skp CDS 752849:753811 - A857 B258 C70 12.10 -1.24 Outer membrane chaperone precursor Skp (OmpH) 1042 1780
THC0290_0619 bamA CDS 753852:756521 - A545 B180 C44 11.22 -2.04 Outer membrane protein assembly complex precursor, BamA 1043 779
THC0290_0620 uppS CDS 756505:757245 - A1353 B467 C136 10.28 -1.32 Di-trans,poly-cis-decaprenylcistransferase 1044 2511
THC0290_0621 CDS 757252:757935 - A1353 B467 C136 10.02 -1.55 Protein of unknown function precursor, putative outer membrane protein 1045 2512
THC0290_0629 tig CDS 763697:765022 + A599 B183 C44 13.49 -1.59 Trigger factor (TF) 1060 1002
THC0290_N_0460 Rfp32 indep 767146:767422 - A1768 B546 C143 6.06 1.73 new transcription segment 1066 3682
THC0290_N_0462 3prime 768085:768500 - A1646 B540 C143 7.07 1.04 new transcription segment 1070 3003
THC0290_N_0463 3prime 768444:768788 + A1158 B395 C120 8.67 -1.11 new transcription segment 1071 2193
THC0290_N_0464 Rfp33 indep 768887:769220 + A1201 B413 C124 7.12 -1.20 new transcription segment 1073 2255
THC0290_0636 CDS 770321:771202 - A1765 B546 C143 9.18 3.04 Probable lipoprotein precursor 1076 3493
THC0290_0640 CDS 773726:774790 + A1783 B548 C143 9.10 1.16 Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor 1080 3832
THC0290_0641 CDS 774935:776176 + A1162 B397 C120 9.67 -1.32 Protein of unknown function precursor 1081 2197
THC0290_N_0466 5prime 777700:777762 + A553 B182 C44 7.99 -1.49 new transcription segment 1083 799
THC0290_0643 dnaG CDS 777763:779748 + A537 B180 C44 9.10 -1.46 DNA primase 1084 735
THC0290_N_0467 3prime 779421:779788 - A1768 B546 C143 7.64 2.97 new transcription segment 1085 3729
THC0290_0644 CDS 779789:780418 - A1768 B546 C143 9.71 3.34 Two-component system response regulatory protein, LuxR family 1087 3728
THC0290_0668 pnp CDS 804981:807116 - A586 B183 C44 12.69 -1.16 Polyribonucleotide nucleotidyltransferase 1132 916
THC0290_0670 CDS 807710:809137 - A1762 B546 C143 9.76 1.02 Probable nucleoside-diphosphate-sugar epimerase 1135 3400
THC0290_0680 CDS 816720:817085 + A1768 B546 C143 9.25 1.26 Protein of unknown function 1146 3721
THC0290_N_0495 intra 817086:817137 + A1674 B543 C143 8.92 2.22 new transcription segment 1147 3072
THC0290_0681 CDS 817138:819144 + A1674 B543 C143 11.13 2.40 Probable TonB-dependent outer membrane receptor precursor 1148 3071
THC0290_0682 CDS 819184:819525 + A1674 B543 C143 11.05 2.36 Protein of unknown function 1149 3069
THC0290_0683 CDS 819616:819906 + A1674 B543 C143 12.57 1.19 Hypothetical protein 1150 3070
THC0290_0684 sulP CDS 819971:821572 + A1674 B543 C143 12.85 1.15 Probable sulfate permease 1152 3076
THC0290_0685 cynT CDS 821595:822230 + A1674 B543 C143 13.09 1.03 Carbonic anhydrase 1153 3077
THC0290_0703 CDS 840392:840925 + A540 B180 C44 10.22 -1.45 Protein of unknown function 1184 751
THC0290_0704 recQ2 CDS 840970:842862 + A601 B183 C44 9.38 -1.54 ATP-dependent DNA helicase RecQ2 1185 1183
THC0290_N_0513 intra 843897:844024 + A533 B180 C44 10.00 -1.08 new transcription segment 1188 727
THC0290_0707 CDS 844456:845016 + A1762 B546 C143 11.62 1.26 Putative transcriptional regulator 1190 3410
THC0290_N_0517 3prime 845017:845453 + A1643 B540 C143 6.94 1.69 new transcription segment 1193 2986
THC0290_0710 ribH CDS 846778:847347 - A600 B183 C44 12.00 -1.08 Riboflavin synthase, beta subunit 1198 1103
THC0290_N_0521 intra 847348:847417 - A454 B168 C44 10.44 -1.54 new transcription segment 1199 589
THC0290_0711 CDS 847418:848209 - A600 B183 C44 12.90 -1.43 Protein of unknown function 1200 1104
THC0290_0713 CDS 849601:850293 + A1042 B344 C102 11.86 1.33 Thioredoxin family protein precursor 1202 2004
THC0290_0720 CDS 856373:856993 - A804 B244 C67 7.90 -1.10 Pseudouridylate synthase 1212 1700
THC0290_0725 carB CDS 860354:863206 - A787 B239 C67 10.34 -1.16 Carbamoyl-phosphate synthase large subunit 1218 1675
THC0290_N_0526 intra 863207:863394 - A787 B239 C67 10.11 -1.04 new transcription segment 1219 1676
THC0290_0727 CDS 863756:864271 + A846 B256 C70 10.40 -1.39 Probable transmembrane protein of unknown function 1223 1766
THC0290_N_0529 3prime 864272:864411 + A845 B256 C70 7.35 -1.43 new transcription segment 1224 1764
THC0290_0728 groL CDS 864839:866467 - A840 B254 C69 13.54 -1.71 60 kDa chaperonin GroEL 1225 1749
THC0290_N_0530 intra 866468:866905 - A840 B254 C69 13.73 -1.49 new transcription segment 1226 1751
THC0290_0729 groS CDS 866906:867181 - A840 B254 C69 13.11 -1.42 10 kDa chaperonin GroES 1227 1750
THC0290_N_0535 intra 870545:870960 - A1199 B413 C124 9.89 -1.04 new transcription segment 1236 2246
THC0290_N_0536 3prime 872624:872743 - A1802 B553 C144 6.80 1.15 new transcription segment 1238 3889
THC0290_0735 remH CDS 872744:873166 - A256 B91 C27 13.42 1.56 Gliding motility protein RemH precursor 1239 334
THC0290_0736 CDS 873196:873774 - A256 B91 C27 12.96 1.53 Protein of unknown function precursor 1240 335
THC0290_0737 CDS 873818:874630 - A1063 B352 C104 11.54 1.65 Protein of unknown function 1241 2032
THC0290_0738 topA CDS 875152:877668 + A544 B180 C44 10.59 -1.84 DNA topoisomerase I 1242 768
THC0290_0739 fjo29 CDS 877672:878817 + A859 B259 C70 10.37 -1.20 Protein of unknown function Fjo29 1243 1782
THC0290_0745 CDS 884948:885376 - A1768 B546 C143 10.65 1.17 Protein of unknown function 1254 3679
THC0290_N_0543 5prime 885343:885446 + A844 B256 C70 8.52 -1.78 new transcription segment 1255 1763
THC0290_0746 CDS 885447:887357 + A544 B180 C44 10.18 -1.98 Probably involved in regulation of translation initiation 1256 769
THC0290_N_0545 3prime 887358:887776 + A574 B183 C44 6.70 -1.49 new transcription segment 1258 850
THC0290_0747 CDS 887640:888794 - A576 B183 C44 9.44 -1.34 Protein of unknown function 1259 857
THC0290_N_0549 3prime 891554:891603 - A294 B109 C31 5.18 -1.50 new transcription segment 1265 379
THC0290_0750 CDS 891604:892050 - A801 B244 C67 11.13 -1.99 Probable DnaJ-class molecular chaperone 1266 1692
THC0290_N_0550 5prime 892051:892112 - A801 B244 C67 11.74 -1.98 new transcription segment 1267 1693
THC0290_N_0553 intra 893946:894137 + A967 B307 C84 9.61 -1.52 new transcription segment 1273 1910
THC0290_0754 CDS 896547:899900 + A1794 B549 C143 11.51 1.06 Protein of unknown function precursor, putative adhesin 1278 3851
THC0290_N_0555 3prime 899901:900114 + A1794 B549 C143 11.01 2.11 new transcription segment 1279 3852
THC0290_N_0559 3prime 906568:906717 + A1662 B542 C143 10.87 1.55 new transcription segment 1289 3035
THC0290_N_0564 Rfp39 indep 913998:914265 + A1768 B546 C143 5.71 1.34 new transcription segment 1301 3685
THC0290_0774 CDS 922230:925658 - A1772 B546 C143 9.57 1.62 Methylmalonyl-CoA mutase 1316 3796
THC0290_0775 CDS 926006:926245 + A1768 B546 C143 9.69 1.43 Hypothetical protein 1317 3661
THC0290_0776 CDS 926245:926562 + A1765 B546 C143 9.55 1.26 Putative plasmid stabilization system protein 1318 3552
THC0290_0779 CDS 928488:929126 + A1765 B546 C143 8.42 1.15 Probable pyrophosphohydrolase 1324 3550
THC0290_N_0581 repeated_region 942166:942314 + A866 B262 C70 9.53 -1.06 new transcription segment 1344 1791
THC0290_N_0582 3prime 943455:943570 - A1646 B540 C143 10.09 1.04 new transcription segment 1346 3000
THC0290_0793 CDS 943571:944119 - A1088 B365 C107 11.30 3.01 Probable transmembrane protein of unknown function 1347 2094
THC0290_0794 fhuA CDS 944125:946380 - A1088 B365 C107 12.63 2.57 Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA 1348 2095
THC0290_0795 prfA CDS 947122:948195 + A976 B308 C84 11.80 -1.45 Peptide chain release factor 1 (RF-1) 1350 1925
THC0290_N_0583 intra 948196:948325 + A976 B308 C84 11.40 -1.77 new transcription segment 1351 1926
THC0290_0796 CDS 948326:950458 + A639 B183 C44 12.76 -1.38 Probable outer membrane protein precursor, OmpA family 1352 1389
THC0290_N_0588 Rfp41 indep 955247:955570 + A1838 B563 C145 5.87 1.19 new transcription segment 1362 3932
THC0290_0815 oxaA CDS 970617:972518 - A800 B244 C67 11.77 -1.16 Inner membrane protein OxaA 1386 1690
THC0290_N_0599 intra 972519:972611 - A800 B244 C67 11.27 -1.07 new transcription segment 1387 1689
THC0290_N_0601 Rfp42 indep 976566:976680 + A1248 B419 C125 5.57 1.22 new transcription segment 1393 2355
THC0290_0822 fjo19 CDS 981245:982255 + A609 B183 C44 10.23 -1.04 Protein of unknown function Fjo19 1398 1269
THC0290_0828 CDS 988051:988332 - A1762 B546 C143 11.63 3.79 Protein of unknown function 1405 3391
THC0290_0829 CDS 988595:989146 + A1762 B546 C143 10.15 1.23 Probable ribosomal-protein-amino-adic N-acetyltransferase 1406 3411
THC0290_0832 dcp2 CDS 990238:992370 - A1796 B549 C143 9.36 1.14 Peptidyl-dipeptidase precursor Dcp2 1410 3876
THC0290_0833 CDS 992645:993088 + A848 B256 C70 9.09 -1.02 Protein of unknown function 1411 1768
THC0290_N_0608 intra 993089:993197 + A1539 B521 C143 7.75 -1.03 new transcription segment 1413 2781
THC0290_N_0612 3prime-PT 994437:994783 + A1732 B546 C143 7.73 -1.79 new transcription segment 1418 3203
THC0290_0837 wzxE CDS 996345:997619 - A327 B122 C33 7.52 -1.37 Putative lipopolysaccharide biosynthesis protein WzxE 1421 414
THC0290_0838 CDS 997620:998723 - A327 B122 C33 9.52 -1.14 Probable aminotransferase involved in lipopolysaccharide biosynthesis 1422 415
THC0290_0842 relA CDS 1001835:1004054 + A1564 B526 C143 12.17 1.17 GTP diphosphokinase 1428 2831
THC0290_N_0617 3prime 1004055:1004461 + A1178 B404 C122 7.26 1.02 new transcription segment 1429 2215
THC0290_0849 CDS 1009303:1009518 - A501 B175 C44 6.72 -1.26 Hypothetical transmembrane protein 1437 669
THC0290_0852 nadC CDS 1011355:1012212 + A525 B180 C44 10.46 -1.38 Nicotinate-nucleotide diphosphorylase (carboxylating) 1441 708
THC0290_0853 yfkH CDS 1012228:1013175 + A601 B183 C44 10.38 -1.65 Protein of unknown function YfkH 1442 1168
THC0290_N_0621 3prime 1016422:1016591 - A1765 B546 C143 11.68 2.34 new transcription segment 1446 3553
THC0290_0856 CDS 1016592:1017284 - A1762 B546 C143 10.92 1.66 Two-component system response regulatory protein, LytTR family 1448 3418
THC0290_0857 rpsF CDS 1017453:1017794 + A542 B180 C44 13.94 -1.29 30S ribosomal protein S6 1449 760
THC0290_N_0623 intra 1018097:1018161 + A542 B180 C44 16.50 -1.02 new transcription segment 1451 759
THC0290_0859 rplI CDS 1018162:1018605 + A542 B180 C44 13.00 -1.39 50S ribosomal protein L9 1452 757
THC0290_N_0625 intra 1018645:1018746 + A810 B244 C67 7.80 -1.75 new transcription segment 1453 1709
THC0290_0860 CDS 1018747:1019220 + A586 B183 C44 8.89 -2.22 Protein of unknown function 1454 912
THC0290_0878 CDS 1034261:1036504 + A1796 B549 C143 6.81 1.09 Protein of unknown function precursor, putative adhesin 1478 3881
THC0290_0889 guaB CDS 1046670:1048142 + A380 B145 C41 11.51 -1.64 IMP dehydrogenase 1495 487
THC0290_N_0638 intra 1048143:1048274 + A380 B145 C41 10.70 -1.41 new transcription segment 1496 488
THC0290_0890 CDS 1048275:1048847 + A380 B145 C41 10.48 -1.54 Nucleoside-triphosphatase 1497 486
THC0290_N_0639 intra 1048848:1048930 + A646 B183 C44 8.22 -1.63 new transcription segment 1498 1406
THC0290_0891 CDS 1048948:1050882 + A967 B307 C84 12.28 -1.25 Probable ATP-dependent RNA helicase, DEAD/DEAH box family 1499 1911
THC0290_0892 CDS 1051044:1052207 - A1663 B542 C143 14.88 1.31 Transposase IS4 family 1502 3040
THC0290_N_0646 intra 1066116:1066321 + A640 B183 C44 10.17 -1.15 new transcription segment 1521 1393
THC0290_0922 CDS 1082167:1082580 + A1649 B541 C143 10.12 1.25 Protein of unknown function 1549 3010
THC0290_0923 CDS 1082679:1084841 + A207 B76 C24 11.40 1.14 Probable TonB-dependent outer membrane receptor precursor 1550 265
THC0290_0925 CDS 1086697:1087044 + A1496 B512 C143 11.82 1.07 Protein of unknown function 1553 2712
THC0290_0931 CDS 1092634:1095516 + A1796 B549 C143 10.63 1.15 Collagenase precursor 1565 3878
THC0290_N_0673 3prime 1113220:1113416 - A1656 B542 C143 12.04 1.49 new transcription segment 1589 3026
THC0290_0944 CDS 1115625:1117259 + A1762 B546 C143 10.85 1.58 Probable S8 subtilisin family serine endopeptidase precursor 1591 3401
THC0290_N_0674 intra 1117260:1117379 + A1037 B342 C102 10.92 1.33 new transcription segment 1592 1998
THC0290_0945 CDS 1117380:1118318 + A1036 B342 C102 11.01 1.00 Probable dioxygenase 1593 1996
THC0290_N_0675 Rfp45 indep 1119827:1119911 - A1765 B546 C143 7.20 1.22 new transcription segment 1595 3510
THC0290_0947 CDS 1120307:1120960 - A1768 B546 C143 8.82 1.36 Protein of unknown function precursor 1597 3698
THC0290_N_0677 5prime 1120961:1121203 - A1768 B546 C143 9.43 1.83 new transcription segment 1598 3658
THC0290_0949 CDS 1121975:1122373 - A1520 B521 C143 7.00 -1.77 Protein of unknown function 1601 2752
THC0290_0950 CDS 1122619:1123467 - A324 B121 C33 5.30 -1.79 Probable transcriptional regulator, AraC family 1602 411
THC0290_0951 gene 1123621:1123923 - A321 B120 C33 6.67 -1.46 Fragment of Protein of unknown function precursor (part 2) 1604 408
THC0290_0959 CDS 1130552:1130911 - A1781 B546 C143 10.33 1.05 Probable transcriptional regulator 1617 3825
THC0290_N_0685 intra 1130912:1130976 - A1127 B376 C109 9.89 1.44 new transcription segment 1618 2159
THC0290_0960 CDS 1130977:1132209 - A1779 B546 C143 9.52 1.10 Major facilitator superfamily (MFS) permease 1619 3815
THC0290_N_0687 3prime 1134182:1134362 - A197 B70 C21 7.94 1.86 new transcription segment 1624 244
THC0290_0968 CDS 1137665:1138330 + A1601 B535 C143 9.67 1.41 Protein of unknown function 1631 2880
THC0290_0978 katG CDS 1149873:1152080 + A1791 B549 C143 10.26 2.27 Bi-functional catalase-peroxidase 1649 3846
THC0290_0981 CDS 1153330:1153587 + A1864 B574 C149 12.11 1.35 Hypothetical protein 1653 3963
THC0290_0982 CDS 1153638:1155428 - A696 B197 C51 11.30 -1.35 Acyl-CoA dehydrogenase family protein 1655 1505
THC0290_N_0702 intra 1155429:1155590 - A694 B196 C51 9.63 -1.61 new transcription segment 1656 1501
THC0290_0983 CDS 1155591:1156772 - A696 B197 C51 10.80 -1.72 Acetyl-CoA C-acyltransferase 1657 1506
THC0290_N_0703 intra 1156773:1156906 - A696 B197 C51 11.89 -1.62 new transcription segment 1658 1508
THC0290_0985 CDS 1157332:1159722 - A696 B197 C51 11.16 -1.61 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein 1660 1504
THC0290_0986 CDS 1159706:1160173 - A884 B274 C75 10.04 -1.92 Probable transcriptional regulator, MarR-family 1661 1810
THC0290_0987 ggt CDS 1160637:1162322 - A606 B183 C44 10.58 -1.27 Gamma-glutamyltransferase 1662 1256
THC0290_N_0709 5prime 1168710:1168824 + A838 B254 C69 9.35 -1.75 new transcription segment 1671 1746
THC0290_0994 lon CDS 1168825:1171275 + A837 B254 C69 11.65 -1.91 S16 family, ATP-dependent endopeptidase La 1672 1744
THC0290_N_0710 intra 1171276:1171449 + A836 B254 C69 7.66 -1.31 new transcription segment 1673 1743
THC0290_N_0711 intra 1172482:1172662 + A20 B10 C5 9.44 -1.29 new transcription segment 1675 25
THC0290_0996 cmk CDS 1172663:1173343 + A402 B153 C43 9.24 -1.21 Cytidylate kinase 1677 516
THC0290_0997 nupG CDS 1173416:1174669 + A539 B180 C44 10.17 -1.62 Major facilitator superfamily (MFS), H+ Symporter (NHS) family, nucleoside permease 1678 739
THC0290_0998 CDS 1174719:1175126 - A600 B183 C44 13.31 -1.49 Hypothetical protein 1679 1075
THC0290_0999 CDS 1175136:1176107 - A600 B183 C44 13.30 -1.49 Protein of unknown function 1680 1076
THC0290_N_0723 intra 1192145:1192355 + A1747 B546 C143 10.06 1.08 new transcription segment 1705 3248
THC0290_N_0725 3prime 1194079:1194140 + A632 B183 C44 6.60 -1.65 new transcription segment 1709 1365
THC0290_1014 CDS 1194317:1195657 + A710 B202 C53 9.79 -1.65 Probable sigma-54 dependent two-component system response regulatory protein 1710 1544
THC0290_1015 CDS 1195821:1196102 + A1628 B539 C143 5.96 2.59 Protein of unknown function 1711 2940
THC0290_1016 kdpF CDS 1196475:1196552 + A1628 B539 C143 5.05 1.61 Potassium-transporting ATPase F subunit 1712 2941
THC0290_1017 kdpA CDS 1196669:1198390 + A1628 B539 C143 5.42 1.74 Potassium-transporting ATPase A subunit 1713 2942
THC0290_1018 kdpB CDS 1198491:1200524 + A1628 B539 C143 5.61 1.61 Potassium-transporting ATPase B subunit 1714 2943
THC0290_1024 CDS 1206629:1207081 - A1768 B546 C143 9.90 1.19 Probable lipoprotein precursor 1723 3628
THC0290_1031 clpS CDS 1209391:1209666 - A1612 B535 C143 12.40 1.52 ATP-dependent Clp protease adaptor protein ClpS 1731 2901
THC0290_1032 prmA CDS 1209707:1210540 - A804 B244 C67 10.65 -1.10 50S ribosomal protein L11 lysine methyltransferase 1732 1701
THC0290_1035 CDS 1212972:1213316 + A1762 B546 C143 12.95 1.84 Protein of unknown function 1736 3394
THC0290_N_0733 3prime 1213317:1213392 + A1762 B546 C143 7.19 1.75 new transcription segment 1737 3413
THC0290_N_0734 3prime 1213392:1213452 - A1768 B546 C143 11.99 1.58 new transcription segment 1738 3723
THC0290_1036 fjo10 CDS 1213453:1213833 - A1768 B546 C143 11.60 1.59 Probable lipoprotein precursor Fjo10. Putative cation transport ATPase 1739 3724
THC0290_1042 cafA CDS 1218140:1219684 - A599 B183 C44 12.18 -3.16 Ribonuclease G 1749 1006
THC0290_N_0738 intra 1219685:1219937 - A599 B183 C44 11.55 -3.41 new transcription segment 1750 1007
THC0290_N_0739 3prime 1219938:1220068 - A540 B180 C44 13.95 -1.48 new transcription segment 1751 746
THC0290_1043 hupA CDS 1220069:1220365 - A540 B180 C44 12.30 -2.67 Histone-like bacterial DNA-binding protein HU-alpha 1752 744
THC0290_N_0742 Rfp48 indep 1225076:1225422 + A1769 B546 C143 6.57 1.23 new transcription segment 1759 3742
THC0290_1055 CDS 1233132:1235285 + A556 B183 C44 9.85 -1.93 Probable outer membrane protein precursor 1770 805
THC0290_1056 CDS 1235407:1236027 + A556 B183 C44 12.01 -1.24 Protein of unknown function 1771 806
THC0290_1057 CDS 1236086:1237453 + A556 B183 C44 12.35 -1.13 Membrane protein containing an internal histidine kinase domain 1773 810
THC0290_1058 CDS 1237456:1237776 + A556 B183 C44 11.31 -1.23 Protein of unknown function 1774 811
THC0290_1059 CDS 1237798:1238103 + A556 B183 C44 12.02 -1.24 Protein of unknown function 1775 809
THC0290_1060 CDS 1238111:1238461 + A556 B183 C44 11.69 -1.09 Protein of unknown function 1776 812
THC0290_N_0748 intra 1238462:1238530 + A556 B183 C44 10.70 -1.20 new transcription segment 1777 807
THC0290_1066 CDS 1243591:1244754 + A1663 B542 C143 14.82 1.37 Transposase IS4 family 1784 3038
THC0290_N_0751 3prime 1248849:1249302 - A1830 B561 C145 6.75 1.13 new transcription segment 1790 3923
THC0290_N_0752 3prime 1249246:1250138 + A124 B51 C18 6.74 -1.02 new transcription segment 1791 157
THC0290_1076 CDS 1254381:1255154 + A601 B183 C44 9.95 -1.02 Probable polysaccharide deacetylase 1797 1155
THC0290_1101 CDS 1286214:1287986 - A331 B122 C33 8.94 -1.92 Putative sugar-transporting permease 1841 430
THC0290_N_0771 Rfp49 indep 1288802:1288918 - A1765 B546 C143 7.35 1.53 new transcription segment 1843 3531
THC0290_N_0773 3prime 1289168:1289525 - A1125 B375 C109 12.85 1.62 new transcription segment 1845 2157
THC0290_N_0774 5prime 1290924:1291096 - A1765 B546 C143 11.78 1.76 new transcription segment 1847 3541
THC0290_1104 CDS 1291219:1291386 + A1760 B546 C143 14.35 1.00 Hypothetical protein 1848 3378
THC0290_N_0775 3prime 1291385:1291947 - A1867 B576 C149 9.57 1.40 new transcription segment 1849 3969
THC0290_1106 CDS 1294577:1294918 - A1614 B535 C143 11.57 1.28 Probable arsenate reductase (glutaredoxin) 1853 2910
THC0290_N_0779 3prime 1297987:1298261 - A1644 B540 C143 6.81 1.46 new transcription segment 1857 2989
THC0290_1110 CDS 1298262:1298678 - A1721 B546 C143 9.99 1.76 Probable arsenate reductase (glutaredoxin) 1859 3177
THC0290_1111 CDS 1298680:1299294 - A1721 B546 C143 10.56 1.63 Protein of unknown function 1860 3178
THC0290_1112 CDS 1299295:1299420 - A1721 B546 C143 9.71 1.58 Hypothetical protein 1861 3179
THC0290_1113 CDS 1299423:1299896 - A1721 B546 C143 10.46 1.64 Protein of unknown function 1862 3175
THC0290_N_0781 intra 1299897:1299959 - A1721 B546 C143 11.48 1.74 new transcription segment 1863 3176
THC0290_1114 CDS 1299960:1300283 - A1721 B546 C143 9.13 1.38 Probable transcriptional regulator, ArsR family 1864 3174
THC0290_1125 CDS 1313339:1315027 - A578 B183 C44 9.39 -1.17 Probable type I restriction-modification system, DNA specificity domain protein 1880 861
THC0290_1126 CDS 1315029:1315811 - A711 B202 C53 9.85 -1.26 Protein of unknown function 1881 1545
THC0290_1127 CDS 1315808:1316614 - A711 B202 C53 9.31 -1.00 Hypothetical protein 1882 1546
THC0290_1135 CDS 1327350:1327610 - A1768 B546 C143 5.93 2.23 Hypothetical protein 1893 3711
THC0290_1137 CDS 1329295:1330215 - A1795 B549 C143 5.93 2.35 Probable transcriptional regulator, AraC family 1895 3873
THC0290_1138 CDS 1330262:1330645 - A1795 B549 C143 6.08 1.61 Hypothetical protein 1896 3857
THC0290_1193 CDS 1381373:1381627 + A1768 B546 C143 7.16 2.91 Hypothetical protein 1953 3714
THC0290_1194 CDS 1381701:1381925 + A1668 B542 C143 4.93 1.44 Hypothetical protein 1954 3053
THC0290_1195 CDS 1381938:1382327 + A1768 B546 C143 5.04 1.09 Hypothetical protein 1955 3708
THC0290_1204 CDS 1386496:1386726 + A1768 B546 C143 8.37 1.10 Hypothetical protein 1964 3689
THC0290_1205 CDS 1386748:1387101 + A1768 B546 C143 6.67 1.01 Hypothetical protein 1965 3690
THC0290_1207 CDS 1387510:1389336 - A1768 B546 C143 6.45 1.01 Protein of unknown function 1967 3716
THC0290_N_0791 Rfp52 indep 1390344:1391243 - A1768 B546 C143 7.09 1.18 new transcription segment 1969 3695
THC0290_N_0792 3prime 1396739:1396899 + A1646 B540 C143 7.84 1.34 new transcription segment 1973 2999
THC0290_N_0793 3prime 1396776:1396854 - A1064 B352 C104 7.16 1.40 new transcription segment 1974 2034
THC0290_1213 CDS 1397195:1398091 - A1064 B352 C104 9.74 1.47 Probable CRISPR-associated (Cas) protein. Cas 1 family 1977 2033
THC0290_miscRNA_0044 Rfp54 misc_RNA 1402818:1403137 + A1768 B546 C143 15.21 1.09 Bacterial Rnase P class A 1982 3726
THC0290_1223 CDS 1418395:1418796 - A1795 B549 C143 9.23 1.19 Protein of unknown function 2000 3874
THC0290_1224 CDS 1418799:1419512 - A1795 B549 C143 10.57 1.29 Protein of unknown function 2002 3875
THC0290_1229 CDS 1423173:1425032 - A600 B183 C44 11.43 -1.03 Probable M61 family peptidase precursor 2011 1098
THC0290_1233 CDS 1426680:1427324 + A1294 B437 C127 8.49 1.87 Probable peroxiredoxin 2015 2435
THC0290_1236 CDS 1428816:1429214 - A1793 B549 C143 9.37 1.17 Cytochrome c family protein 2018 3849
THC0290_1237 CDS 1429217:1429477 - A684 B192 C48 8.17 1.46 Hypothetical transmembrane protein 2019 1484
THC0290_1238 CDS 1429483:1430496 - A684 B192 C48 8.02 1.20 Cytochrome c oxidase family protein 2020 1485
THC0290_1239 CDS 1430503:1432671 - A688 B193 C48 7.77 1.10 Cytochrome c oxidase family protein 2021 1494
THC0290_1244 CDS 1436703:1437329 - A1768 B546 C143 8.65 1.10 Probable transcriptional regulatory protein, Crp/Fnr family 2028 3709
THC0290_N_0809 intra 1437888:1437991 - A543 B180 C44 7.22 -2.59 new transcription segment 2031 765
THC0290_1245 CDS 1438036:1438314 - A545 B180 C44 11.75 -1.78 Thiol:disulfide interchange protein, C-terminal region 2032 772
THC0290_N_0811 intra 1438315:1438460 - A545 B180 C44 12.57 -1.92 new transcription segment 2033 774
THC0290_1246 CDS 1438461:1439183 - A545 B180 C44 12.57 -2.16 Thiol:disulfide interchange lipoprotein precursor, N-terminal region 2034 773
THC0290_1247 CDS 1439294:1439668 + A1762 B546 C143 8.80 1.19 Protein of unknown function 2035 3421
THC0290_N_0814 Rfp56 indep 1444415:1444724 - A1768 B546 C143 6.15 1.25 new transcription segment 2041 3700
THC0290_N_0815 3prime 1446042:1446224 - A1762 B546 C143 10.25 3.16 new transcription segment 2043 3426
THC0290_1252 CDS 1446225:1446704 - A1762 B546 C143 11.46 3.04 Universal stress protein, UspA family 2044 3425
THC0290_N_0816 intra 1446727:1446954 - A1795 B549 C143 7.98 1.02 new transcription segment 2045 3872
THC0290_1253 CDS 1446955:1448118 - A1762 B546 C143 9.31 1.03 Probable two-component system response regulatory protein - glycosyl transferase, group 2 family protein 2046 3395
THC0290_1254 CDS 1448226:1451315 + A1664 B542 C143 6.63 1.25 Probable transmembrane protein 2047 3043
THC0290_1255 CDS 1451315:1452553 + A1874 B578 C149 6.69 1.18 Protein of unknown function precursor 2048 3976
THC0290_1256 CDS 1452537:1454093 + A1602 B535 C143 7.52 1.17 Glycoside hydrolase, family 5 2049 2882
THC0290_N_0818 3prime 1459920:1459991 + A1589 B533 C143 5.28 1.58 new transcription segment 2055 2862
THC0290_1264 CDS 1464096:1465640 - A801 B244 C67 10.18 -1.29 Putative DNA or RNA helicase 2060 1696
THC0290_N_0821 3prime 1467104:1468011 - A1779 B546 C143 8.40 1.63 new transcription segment 2065 3813
THC0290_1268 CDS 1468012:1468398 - A1768 B546 C143 12.02 1.26 Acyl-CoA hydrolase family protein 2066 3703
THC0290_1269 CDS 1468395:1468811 - A1768 B546 C143 10.47 1.38 MutT/nudix family protein 2067 3635
THC0290_1270 CDS 1468900:1469292 + A1615 B535 C143 10.19 1.65 Protein of unknown function 2068 2917
THC0290_N_0822 3prime 1469293:1469476 + A1615 B535 C143 8.98 1.87 new transcription segment 2069 2918
THC0290_1271 hisIE CDS 1469304:1469903 - A723 B206 C54 5.56 -1.65 Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase, Phosphoribosyl-ATP pyrophosphatase] 2070 1579
THC0290_1272 hisF CDS 1469906:1470661 - A723 B206 C54 5.85 -1.48 Imidazole glycerol phosphate synthase subunit HisF 2071 1580
THC0290_1273 hisA CDS 1470665:1471390 - A708 B202 C53 5.82 -2.34 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase 2072 1538
THC0290_1274 hisH CDS 1471545:1472126 - A723 B206 C54 6.96 -1.30 Imidazole glycerol phosphate synthase subunit HisH 2074 1578
THC0290_N_0823 intra 1472127:1472214 - A708 B202 C53 5.36 -2.26 new transcription segment 2075 1539
THC0290_1275 hisB CDS 1472215:1473351 - A709 B202 C53 7.33 -1.34 Histidine biosynthesis bifunctional protein HisB [Includes: Histidinol-phosphatase (EC 3.1.3.15), Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD)] 2076 1540
THC0290_1276 hisC CDS 1473351:1474391 - A709 B202 C53 7.01 -1.91 Histidinol-phosphate transaminase 2077 1541
THC0290_1277 hisD CDS 1474384:1475673 - A709 B202 C53 7.22 -2.01 Histidinol dehydrogenase 2078 1542
THC0290_1278 hisG CDS 1475685:1476542 - A709 B202 C53 6.90 -2.44 ATP phosphoribosyltransferase 2079 1543
THC0290_1281 CDS 1479547:1481574 - A1105 B371 C109 8.50 1.19 Probable transmembrane protein of unknown function 2085 2129
THC0290_1285 CDS 1485338:1485874 + A1642 B540 C143 9.96 1.04 Probable DNA polymerase III subunit 2092 2981
THC0290_1286 CDS 1485887:1486099 - A1765 B546 C143 8.77 1.10 Hypothetical protein 2095 3476
THC0290_1293 CDS 1492056:1492418 - A601 B183 C44 11.79 -1.80 Protein of unknown function 2106 1174
THC0290_1294 CDS 1492421:1493350 - A601 B183 C44 12.61 -1.46 Probable UDP-N-acetylglucosamine acyltransferase 2107 1175
THC0290_1295 efp CDS 1493357:1493920 - A601 B183 C44 12.69 -1.21 Elongation factor P (EF-P) 2108 1173
THC0290_N_0837 intra 1493921:1493987 - A600 B183 C44 11.56 -1.53 new transcription segment 2109 1087
THC0290_1296 lpxA CDS 1493988:1494770 - A600 B183 C44 12.13 -1.41 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2110 1085
THC0290_N_0838 intra 1494771:1494824 - A600 B183 C44 11.88 -1.03 new transcription segment 2111 1082
THC0290_1297 lpxC/fabZ CDS 1494825:1496213 - A600 B183 C44 12.07 -1.06 Bifunctional enzyme : UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase and (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase 2112 1086
THC0290_1307 CDS 1507520:1509589 - A1775 B546 C143 7.94 1.55 Probable TonB-dependent outer membrane receptor precursor 2130 3800
THC0290_N_0846 intra 1509590:1509687 - A1775 B546 C143 8.42 1.57 new transcription segment 2131 3801
THC0290_1308 CDS 1509688:1510665 - A1775 B546 C143 7.50 1.29 Protein of unknown function precursor 2132 3799
THC0290_1309 gene 1510782:1511459 + A1765 B546 C143 10.41 2.38 Fragment of two-component system sensor histidine kinase (part 1) 2133 3489
THC0290_1310 CDS 1511467:1512630 - A1663 B542 C143 14.89 1.31 Transposase IS4 family 2134 3042
THC0290_1311 gene 1512751:1513449 + A1765 B546 C143 8.32 1.64 Fragment of two-component system sensor histidine kinase (part 2) 2135 3491
THC0290_1312 CDS 1513488:1514048 - A1745 B546 C143 8.36 -1.14 Protein of unknown function 2136 3233
THC0290_1316 CDS 1516638:1518572 + A687 B193 C48 9.88 1.95 Probable myosin-crossreactive antigen 2140 1489
THC0290_1317 CDS 1518688:1519584 + A687 B193 C48 9.60 2.04 3-hydroxyacyl-CoA dehydrogenase family protein 2141 1491
THC0290_1318 CDS 1519624:1521210 + A687 B193 C48 9.69 2.08 Probable myosin-crossreactive antigen 2142 1492
THC0290_1319 CDS 1521229:1521756 + A687 B193 C48 9.09 2.37 Protein of unknown function 2143 1490
THC0290_1320 CDS 1521863:1523305 - A600 B183 C44 11.97 -1.91 Phosphate transporter family protein 2144 1105
THC0290_1321 CDS 1523330:1523983 - A542 B180 C44 11.00 -1.70 Protein of unknown function 2145 762
THC0290_N_0847 intra 1529964:1530048 + A319 B119 C33 9.75 -1.13 new transcription segment 2150 406
THC0290_1336 CDS 1540353:1540895 + A1763 B546 C143 9.60 1.31 Protein of unknown function containing an heme NO Binding domain 2162 3430
THC0290_1337 CDS 1540897:1543509 + A1762 B546 C143 9.57 1.06 Two-component system sensor histidine kinase 2163 3388
THC0290_1338 CDS 1543512:1544648 + A1876 B578 C149 9.85 1.13 Protein of unknown function 2164 3979
THC0290_1339 CDS 1544648:1545673 + A1876 B578 C149 9.38 1.33 Probable two-component system sensor histidine kinase 2165 3980
THC0290_1340 CDS 1545673:1545990 + A1876 B578 C149 9.16 1.05 Probable two-component system histidine-containing phosphotransfer protein (HPt) 2166 3981
THC0290_1342 CDS 1546769:1548826 - A1669 B542 C143 8.70 1.57 Protein of unknown function precursor 2170 3057
THC0290_1343 CDS 1549155:1552811 - A1795 B549 C143 6.77 3.25 Protein of unknown function precursor containing PKD domains and a C-terminal secretion signal 2171 3855
THC0290_1344 CDS 1552913:1553296 - A1795 B549 C143 7.05 2.43 Transposase IS1 family 2172 3856
THC0290_1347 CDS 1556495:1558387 + A511 B179 C44 11.44 -1.10 Peptidase, U32 family 2177 682
THC0290_1348 bfmBA CDS 1558467:1560443 - A600 B183 C44 11.57 -1.06 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 2180 1107
THC0290_N_0858 intra 1562632:1562975 + A875 B268 C74 12.97 -1.03 new transcription segment 2186 1800
THC0290_1353 CDS 1563922:1564455 + A608 B183 C44 10.02 -1.03 Probable ribosomal-protein-amino-adic N-acetyltransferase 2189 1265
THC0290_1354 CDS 1564460:1564954 + A585 B183 C44 8.84 -1.09 Protein of unknown function 2190 909
THC0290_1360 CDS 1571085:1571513 - A785 B238 C67 9.52 -2.44 Protein of unknown function 2199 1672
THC0290_N_0868 intra 1581049:1581297 - A1745 B546 C143 8.50 -1.36 new transcription segment 2212 3236
THC0290_1369 CDS 1581298:1582101 - A636 B183 C44 8.75 -2.68 Probable short-chain type dehydrogenase 2214 1373
THC0290_1370 CDS 1582125:1582283 - A636 B183 C44 7.91 -2.04 Truncated chloromuconate cycloisomerase 2215 1372
THC0290_N_0869 3prime 1582284:1582335 - A503 B176 C44 6.46 -1.98 new transcription segment 2216 671
THC0290_1371 CDS 1582522:1583574 + A315 B119 C33 9.60 -1.01 Putative glutamine cyclotransferase 2218 401
THC0290_N_0876 3prime 1589665:1589857 - A152 B59 C19 8.28 1.19 new transcription segment 2232 191
THC0290_tRNA_0022 tRNA 1599447:1599524 + A1768 B546 C143 11.87 1.70 transfer RNA-Val 2249 3669
THC0290_1394 infC CDS 1609187:1609600 + A541 B180 C44 12.77 -1.23 Translation initiation factor IF-3 2263 755
THC0290_N_0887 intra 1609601:1609709 + A541 B180 C44 12.71 -1.24 new transcription segment 2264 756
THC0290_N_0890 Rfp63 indep 1610470:1610784 - A1771 B546 C143 5.98 2.45 new transcription segment 2269 3794
THC0290_1397 CDS 1610957:1613875 + A545 B180 C44 11.89 -1.03 Peptidase, M16 family 2271 777
THC0290_1399 CDS 1616418:1617146 - A601 B183 C44 9.67 -1.04 Probable transmembrane protein of unknown function 2276 1127
THC0290_1400 aldH CDS 1617164:1618492 - A600 B183 C44 9.91 -1.07 Aldehyde dehydrogenase 2277 1074
THC0290_1401 CDS 1618519:1619214 - A600 B183 C44 10.57 -1.02 Probable 23S rRNA pseudouridine synthase 2278 1077
THC0290_1402 CDS 1619248:1620525 - A600 B183 C44 9.76 -1.31 Probable S41 family peptidase precursor 2279 1100
THC0290_1403 panB1 CDS 1620572:1621390 - A517 B180 C44 10.30 -1.10 3-methyl-2-oxobutanoate hydroxymethyltransferase panB1 2280 690
THC0290_1407 CDS 1626512:1627642 - A1054 B347 C103 10.03 2.07 Probable membrane fusion efflux lipoprotein precursor 2289 2020
THC0290_1408 CDS 1627716:1632059 - A1054 B347 C103 10.12 2.09 Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein 2290 2021
THC0290_N_0900 intra 1632060:1632186 - A1054 B347 C103 9.00 1.78 new transcription segment 2291 2019
THC0290_1409 CDS 1632187:1632579 - A1625 B538 C143 10.93 1.72 Protein of unknown function precursor 2292 2936
THC0290_N_0903 Rfp64 indep 1635872:1635993 - A1768 B546 C143 10.62 2.48 new transcription segment 2299 3683
THC0290_N_0907 5prime 1645544:1645597 - A1768 B546 C143 9.64 1.22 new transcription segment 2311 3605
THC0290_1421 CDS 1645706:1646227 + A609 B183 C44 9.90 -1.13 Probable transmembrane protein of unknown function 2312 1270
THC0290_1422 CDS 1646261:1647379 + A530 B180 C44 9.74 -1.42 Protein of unknown function 2313 721
THC0290_1423 CDS 1647376:1649094 + A530 B180 C44 9.08 -1.63 Protein of unknown function 2314 722
THC0290_N_0908 intra 1649095:1649507 + A876 B269 C74 8.68 -1.43 new transcription segment 2315 1801
THC0290_1424 CDS 1649508:1651811 + A1787 B549 C143 9.57 -1.29 Probable aminotransferase 2316 3838
THC0290_1425 dnaK CDS 1652269:1654149 - A840 B254 C69 14.15 -1.82 Chaperone protein DnaK 2319 1755
THC0290_N_0917 intra 1658744:1659049 - A590 B183 C44 9.78 -1.03 new transcription segment 2327 937
THC0290_N_0918 intra 1662236:1662355 - A843 B255 C69 11.02 -1.17 new transcription segment 2329 1762
THC0290_1431 CDS 1662356:1662937 - A843 B255 C69 10.82 -1.21 Probable transmembrane protein of unknown function 2330 1761
THC0290_1433 CDS 1664543:1665136 + A1762 B546 C143 7.59 1.99 Protein of unknown function 2333 3408
THC0290_N_0921 3prime-PT 1668796:1669027 - A1651 B542 C143 5.41 1.19 new transcription segment 2338 3012
THC0290_1437 CDS 1669768:1670247 - A781 B238 C67 11.06 -1.11 Probable transcriptional regulator, AsnC family 2343 1667
THC0290_N_0926 5prime 1670248:1670308 - A981 B309 C84 6.95 -1.12 new transcription segment 2344 1934
THC0290_1441 speE CDS 1672956:1673624 + A1768 B546 C143 9.04 1.19 Putative spermidine synthase 2350 3701
THC0290_N_0929 3prime 1673625:1673962 + A1644 B540 C143 6.32 1.00 new transcription segment 2352 2990
THC0290_N_0930 intra 1675609:1675691 - A1765 B546 C143 8.96 2.20 new transcription segment 2354 3540
THC0290_1444 CDS 1675692:1676540 - A1762 B546 C143 10.01 2.38 Protein of unknown function 2355 3424
THC0290_N_0937 5prime 1681345:1681454 - A1762 B546 C143 7.20 2.53 new transcription segment 2368 3420
THC0290_N_0943 3prime 1688545:1688987 - A122 B50 C18 6.89 -1.56 new transcription segment 2382 155
THC0290_N_0953 3prime 1704683:1704758 - A1126 B376 C109 9.60 1.41 new transcription segment 2403 2158
THC0290_1472 rimK CDS 1711703:1713076 + A517 B180 C44 10.21 -1.09 Ribosomal protein S6 modification protein RimK 2410 693
THC0290_1473 CDS 1713087:1713590 + A611 B183 C44 10.07 -1.03 Probable transmembrane protein of unknown function 2411 1289
THC0290_1478 CDS 1717064:1717531 - A1067 B355 C104 11.53 1.09 Protein of unknown function 2420 2037
THC0290_N_0964 5prime 1718789:1718853 - A1068 B355 C104 12.61 1.03 new transcription segment 2422 2039
THC0290_N_0976 3prime 1730076:1730154 - A1573 B530 C143 8.07 2.05 new transcription segment 2449 2842
THC0290_1494 CDS 1730155:1732128 - A1761 B546 C143 10.69 1.50 Probable ribonuclease 2450 3382
THC0290_N_0977 5prime 1732129:1732257 - A1768 B546 C143 10.04 1.52 new transcription segment 2451 3627
THC0290_N_0978 5prime 1732259:1732334 - A1762 B546 C143 8.70 1.25 new transcription segment 2452 3417
THC0290_1500 CDS 1741823:1742491 + A1035 B342 C102 10.53 2.12 Two-component system response regulatory protein, LuxR family 2462 1991
THC0290_N_0984 3prime 1742492:1742714 + A1035 B342 C102 10.42 1.63 new transcription segment 2463 1993
THC0290_1501 CDS 1742715:1743236 + A1035 B342 C102 9.57 1.44 Hypothetical protein 2464 1992
THC0290_1502 CDS 1743248:1744315 + A1035 B342 C102 10.53 1.95 Protein of unknown function 2465 1994
THC0290_1503 CDS 1744557:1744856 + A1035 B342 C102 10.69 2.21 Probable lipoprotein precursor 2466 1995
THC0290_1506 CDS 1747485:1748612 + A600 B183 C44 9.67 -1.08 Probable cysteine desulfurase 2471 1102
THC0290_1522 CDS 1769814:1770386 - A852 B256 C70 7.53 -1.93 Protein of unknown function related to microcin resistance protein McbG 2494 1773
THC0290_N_0995 intra 1770510:1770582 - A1768 B546 C143 12.28 1.26 new transcription segment 2496 3736
THC0290_1523 CDS 1770583:1770726 - A1768 B546 C143 10.41 1.10 Protein of unknown function 2497 3735
THC0290_N_1004 3prime 1788343:1788481 - A1665 B542 C143 10.12 1.69 new transcription segment 2517 3045
THC0290_1534 glyA CDS 1788482:1789756 - A1761 B546 C143 13.46 1.26 Glycine hydroxymethyltransferase 2518 3381
THC0290_1536 CDS 1791488:1791967 + A1619 B535 C143 8.99 1.15 Probable transcriptional regulator 2523 2927
THC0290_N_1008 3prime 1791968:1792228 + A1662 B542 C143 6.48 1.16 new transcription segment 2524 3036
THC0290_N_1009 3prime 1792895:1792953 - A1637 B540 C143 6.09 1.66 new transcription segment 2526 2968
THC0290_1538 CDS 1792954:1793694 - A1638 B540 C143 11.99 2.23 Probable lipoprotein precursor 2527 2969
THC0290_1539 CDS 1793697:1795478 - A1638 B540 C143 11.83 2.00 Probable transmembrane protein of unknown function 2529 2970
THC0290_1540 CDS 1795484:1795813 - A1638 B540 C143 11.13 1.85 Probable transcriptional regulator, PadR family 2530 2972
THC0290_N_1011 intra 1795814:1796040 - A1638 B540 C143 10.51 1.96 new transcription segment 2531 2975
THC0290_1541 CDS 1796041:1796505 - A1638 B540 C143 11.18 2.15 Probable transmembrane protein of unknown function 2533 2973
THC0290_N_1012 5prime 1796506:1796567 - A1638 B540 C143 10.46 2.35 new transcription segment 2534 2971
THC0290_1542 CDS 1796696:1797148 + A1765 B546 C143 7.33 2.32 Protein of unknown function 2535 3480
THC0290_1543 CDS 1797232:1798140 + A1765 B546 C143 10.10 1.14 Probable nucleoside-diphosphate sugar epimerase 2537 3481
THC0290_N_1014 Rfp66 indep 1798145:1798224 - A1768 B546 C143 6.62 1.04 new transcription segment 2538 3594
THC0290_1544 grpE CDS 1798337:1798909 + A840 B254 C69 12.44 -2.08 Chaperone protein GrpE 2539 1753
THC0290_N_1015 intra 1798910:1798967 + A831 B252 C69 4.70 -1.70 new transcription segment 2540 1738
THC0290_1545 dnaJ CDS 1798968:1800092 + A840 B254 C69 12.50 -2.03 Chaperone protein DnaJ 2541 1754
THC0290_N_1017 intra 1800118:1800206 + A839 B254 C69 7.16 -1.97 new transcription segment 2542 1748
THC0290_1546 natA CDS 1800256:1801176 + A555 B182 C44 10.86 -1.02 Probable ABC-type Na(+)-transporting system, ATPase component 2544 802
THC0290_1547 natB CDS 1801258:1802562 + A555 B182 C44 10.33 -1.25 Probable ABC-type Na(+)-transporting system, permease component 2546 803
THC0290_N_1020 intra 1802563:1802708 + A604 B183 C44 9.16 -1.57 new transcription segment 2547 1213
THC0290_N_1027 5prime 1806085:1806310 - A1244 B419 C125 7.95 -1.30 new transcription segment 2559 2350
THC0290_1553 CDS 1806266:1806697 + A309 B116 C33 9.40 -1.07 NUDIX hydrolase 2561 394
THC0290_1555 CDS 1808272:1809813 - A1779 B546 C143 9.95 1.05 Protein of unknown function 2564 3821
THC0290_1556 CDS 1810067:1810495 + A1762 B546 C143 11.87 1.48 Protein of unknown function 2565 3397
THC0290_1557 menF CDS 1810503:1811564 + A1762 B546 C143 10.89 1.71 Isochorismate synthase 2566 3387
THC0290_N_1031 3prime 1811565:1811830 + A1643 B540 C143 8.25 1.39 new transcription segment 2568 2983
THC0290_1558 CDS 1811635:1812084 - A61 B32 C14 11.80 -1.21 Protein of unknown function 2570 70
THC0290_N_1034 5prime 1813041:1813103 + A1777 B546 C143 9.92 1.53 new transcription segment 2572 3806
THC0290_N_1036 3prime 1813210:1813321 - A1124 B375 C109 10.27 1.21 new transcription segment 2574 2155
THC0290_1569 CDS 1824808:1827336 + A1796 B549 C143 8.00 2.84 Probable TonB-dependent outer membrane siderophore receptor precursor 2592 3877
THC0290_N_1045 intra 1828770:1828972 - A1765 B546 C143 8.63 1.62 new transcription segment 2595 3538
THC0290_1571 CDS 1828973:1830133 - A1765 B546 C143 9.02 1.58 Protein of unknown function precursor 2596 3551
THC0290_1578 CDS 1835452:1835757 + A1768 B546 C143 8.58 1.19 Hypothetical transmembrane protein 2607 3646
THC0290_1585 CDS 1841110:1841760 - A1053 B346 C102 11.55 1.10 Probable phosphatase/phosphohexomutase 2616 2018
THC0290_N_1054 3prime 1843478:1843604 + A1765 B546 C143 8.08 1.23 new transcription segment 2621 3497
THC0290_N_1055 Rfp67 indep 1843941:1844015 + A1765 B546 C143 5.43 1.06 new transcription segment 2623 3503
THC0290_1590 gene 1844029:1844682 - A1765 B546 C143 7.84 1.34 Truncated protein, N-terminal region (fragment) 2624 3488
THC0290_1593 gene 1848100:1848249 - A1765 B546 C143 5.54 1.26 Truncated transposase ISNCY family, central region 2628 3508
THC0290_N_1057 5prime 1848250:1848475 - A1795 B549 C143 5.45 1.04 new transcription segment 2629 3871
THC0290_1594 CDS 1848581:1850773 - A1795 B549 C143 6.49 1.41 Protein of unknown function 2630 3865
THC0290_1595 CDS 1851066:1852952 + A1762 B546 C143 11.60 2.70 Protein of unknown function precursor, putative adhesin 2631 3405
THC0290_N_1058 intra 1852953:1853067 + A1762 B546 C143 9.73 3.07 new transcription segment 2632 3406
THC0290_N_1059 Rfp68 indep 1853069:1853412 + A1762 B546 C143 10.45 3.67 new transcription segment 2633 3407
THC0290_N_1060 3prime 1853392:1853555 - A376 B143 C41 11.50 -1.39 new transcription segment 2634 481
THC0290_1596 trxB1 CDS 1853556:1854503 - A377 B143 C41 11.53 -1.25 Thioredoxin-disulfide reductase 2635 483
THC0290_N_1061 intra 1854522:1854605 - A926 B287 C78 9.19 -1.32 new transcription segment 2636 1860
THC0290_1597 dnaB CDS 1854606:1856153 - A920 B285 C78 10.21 -1.35 Replicative DNA helicase 2637 1854
THC0290_N_1062 5prime 1856154:1856259 - A926 B287 C78 8.34 -1.69 new transcription segment 2638 1861
THC0290_N_1064 intra 1857289:1857455 - A585 B183 C44 7.92 -1.92 new transcription segment 2640 910
THC0290_1599 CDS 1857456:1858334 - A601 B183 C44 9.59 -1.42 Probable transmembrane protein of unknown function. Predicted permease 2642 1158
THC0290_1600 (lptF/lptG) CDS 1858321:1859406 - A575 B183 C44 9.69 -1.48 Probable lipopolysaccharide export system permease protein, lptF/lptG family 2643 852
THC0290_1601 tgt CDS 1859480:1860610 - A575 B183 C44 11.71 -1.28 Queuine tRNA-ribosyltransferase 2645 853
THC0290_N_1072 5prime 1868837:1869005 - A838 B254 C69 9.02 -1.52 new transcription segment 2658 1747
THC0290_N_1087 intra 1888625:1888779 + A1207 B415 C124 10.49 -1.34 new transcription segment 2693 2265
THC0290_N_1088 3prime 1889021:1889095 + A1207 B415 C124 8.60 -1.58 new transcription segment 2695 2263
THC0290_1629 secA CDS 1889096:1892446 + A840 B254 C69 12.53 -1.49 Preprotein translocase SecA subunit 2696 1752
THC0290_1630 CDS 1892517:1893479 - A206 B76 C24 14.16 2.42 Protein of unknown function precursor 2697 262
THC0290_1631 CDS 1893486:1894529 - A206 B76 C24 14.72 2.10 Probable cytochrome c peroxidase precursor 2698 263
THC0290_N_1090 3prime-PT 1894530:1894615 - A206 B76 C24 11.61 2.04 new transcription segment 2699 261
THC0290_N_1092 3prime 1894616:1894799 - A206 B76 C24 15.86 1.94 new transcription segment 2701 258
THC0290_1632 CDS 1894800:1895606 - A206 B76 C24 15.52 1.96 Probable lipoprotein precursor 2702 259
THC0290_N_1093 intra 1895607:1895729 - A206 B76 C24 14.68 2.15 new transcription segment 2703 260
THC0290_1633 CDS 1895730:1896068 - A1873 B578 C149 12.35 1.43 Protein of unknown function 2704 3975
THC0290_1634 CDS 1896238:1896348 + A1760 B546 C143 10.49 1.95 Hypothetical protein 2705 3372
THC0290_N_1094 3prime 1896419:1896833 - A1665 B542 C143 9.12 1.40 new transcription segment 2706 3044
THC0290_1636 glcD CDS 1896834:1898237 - A237 B84 C26 11.18 1.25 (S)-2-hydroxy-acid oxidase 2708 310
THC0290_N_1098 intra 1902069:1902203 - A396 B152 C42 8.11 -1.45 new transcription segment 2717 506
THC0290_1641 norM CDS 1902204:1903583 - A575 B183 C44 8.35 -1.16 Multidrug resistance protein norM (Na(+)/drug antiporter) 2718 851
THC0290_1648 CDS 1911482:1911874 + A601 B183 C44 10.90 -1.11 Protein of unknown function 2732 1135
THC0290_1651 CDS 1913720:1915354 + A586 B183 C44 11.17 -1.12 Probably involved in regulation of translation initiation 2738 913
THC0290_N_1108 3prime 1915355:1915609 + A858 B259 C70 8.09 -1.19 new transcription segment 2739 1781
THC0290_1657 glnA CDS 1920647:1922836 - A961 B305 C84 11.42 -1.75 Glutamate--ammonia ligase 2746 1903
THC0290_N_1112 3prime 1924112:1924383 + A1765 B546 C143 9.73 1.64 new transcription segment 2749 3533
THC0290_tRNA_0030 tRNA 1927023:1927100 + A1768 B546 C143 11.80 1.82 transfer RNA-Val 2755 3670
THC0290_1666 CDS 1930665:1931180 - A540 B180 C44 12.24 -1.06 Probable lipoprotein precursor 2762 753
THC0290_1667 nusB CDS 1931191:1932102 - A540 B180 C44 11.87 -1.34 N utilization substance protein B homolog (NusB protein) 2763 754
THC0290_N_1120 3prime 1932156:1932279 - A536 B180 C44 9.24 -1.24 new transcription segment 2764 732
THC0290_N_1125 Rfp73 indep 1939566:1939699 + A1768 B546 C143 5.70 2.78 new transcription segment 2771 3684
THC0290_1675 CDS 1943090:1944706 - A1055 B348 C104 8.87 -1.63 Probable asparagine synthetase [glutamine-hydrolyzing] 2775 2022
THC0290_1676 CDS 1944906:1945355 - A1768 B546 C143 8.82 1.17 Protein of unknown function 2777 3630
THC0290_1689 pabA CDS 1961221:1961793 + A718 B205 C53 9.56 -1.07 Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 2804 1566
THC0290_1691 trpC CDS 1962890:1963672 + A718 B205 C53 9.32 -1.23 Indole-3-glycerol phosphate synthase 2807 1561
THC0290_1692 trpF CDS 1963765:1964379 + A718 B205 C53 8.93 -1.64 Phosphoribosylanthranilate isomerase 2809 1562
THC0290_1693 trpB CDS 1964392:1965573 + A715 B202 C53 9.79 -1.31 Tryptophan synthase, beta subunit 2810 1551
THC0290_N_1143 intra 1965574:1965769 + A715 B202 C53 9.59 -1.10 new transcription segment 2811 1553
THC0290_1694 trpA CDS 1965770:1966531 + A715 B202 C53 9.62 -1.28 Tryptophan synthase, alpha subunit 2813 1552
THC0290_1703 CDS 1976672:1977127 - A1768 B546 C143 9.98 1.47 Hypothetical transmembrane protein 2829 3699
THC0290_N_1150 intra 1977128:1977205 - A1768 B546 C143 10.70 1.63 new transcription segment 2830 3702
THC0290_1704 CDS 1977206:1977442 - A1768 B546 C143 10.98 1.51 Hypothetical transmembrane protein 2831 3662
THC0290_1705 CDS 1978255:1979847 + A608 B183 C44 9.03 -1.20 Probable type I modification methyltransferase 2833 1262
THC0290_1706 CDS 1979849:1980568 + A608 B183 C44 8.87 -1.30 Hypothetical protein 2834 1263
THC0290_1707 CDS 1980570:1981727 + A532 B180 C44 8.83 -1.43 Probable type I restriction-modification system, DNA specificity domain protein 2835 724
THC0290_1708 CDS 1981738:1982421 + A532 B180 C44 8.33 -1.38 Hypothetical protein 2836 725
THC0290_1709 CDS 1982411:1982950 + A48 B27 C13 7.62 -1.41 Protein of unknown function 2837 55
THC0290_N_1153 intra 1982951:1983088 + A1520 B521 C143 7.61 -1.02 new transcription segment 2839 2753
THC0290_1710 CDS 1983089:1985917 + A600 B183 C44 9.08 -1.03 Probable type I restriction endonuclease 2840 1088
THC0290_1717 typA CDS 1993758:1995554 - A801 B244 C67 12.52 -1.80 GTP-binding protein TypA 2855 1694
THC0290_N_1161 Rfp78 indep 1995370:1995588 + A1768 B546 C143 6.39 2.58 new transcription segment 2856 3686
THC0290_1718 rpsT CDS 2002916:2003167 - A786 B238 C67 12.91 -1.37 30S ribosomal protein S20 2863 1673
THC0290_N_1163 3prime 2003168:2003329 - A786 B238 C67 13.00 -1.52 new transcription segment 2864 1674
THC0290_1720 CDS 2005180:2006193 + A1779 B546 C143 12.42 1.35 Hypothetical lipoprotein precursor 2870 3819
THC0290_N_1167 intra 2006194:2006263 + A1779 B546 C143 10.47 1.67 new transcription segment 2871 3820
THC0290_1721 CDS 2006264:2007796 + A1779 B546 C143 11.26 1.31 Protein of unknown function precursor 2872 3818
THC0290_N_1168 3prime 2007797:2007960 + A1779 B546 C143 11.33 1.98 new transcription segment 2873 3817
THC0290_1722 CDS 2008149:2009450 + A967 B307 C84 10.08 -1.61 Protein of unknown function 2874 1912
THC0290_1728 ndk CDS 2016173:2016592 + A542 B180 C44 12.75 -1.21 Nucleoside-diphosphate kinase 2883 764
THC0290_N_1174 3prime 2016593:2016664 + A933 B292 C81 11.18 -1.71 new transcription segment 2884 1869
THC0290_1735 CDS 2022508:2022927 - A1768 B546 C143 10.79 1.39 Protein of unknown function 2893 3676
THC0290_N_1177 5prime 2022928:2023018 - A1615 B535 C143 9.97 1.54 new transcription segment 2894 2920
THC0290_1736 CDS 2023096:2024181 + A1765 B546 C143 7.74 1.34 Probable penicillin-binding protein precursor 2895 3495
THC0290_1753 CDS 2040786:2040938 - A540 B180 C44 15.73 -1.27 Hypothetical protein 2924 741
THC0290_1754 rpmG CDS 2040948:2041130 - A540 B180 C44 13.89 -1.44 50S ribosomal protein L33 2925 748
THC0290_1755 rpmB CDS 2041157:2041393 - A540 B180 C44 13.35 -1.48 50S ribosomal protein L28 2926 745
THC0290_1761 CDS 2045877:2046872 - A545 B180 C44 11.94 -1.04 Probable lipoprotein precursor 2934 782
THC0290_1764 pyrR2 CDS 2047921:2048418 + A1615 B535 C143 11.30 1.41 Bifunctional protein : pyrimidine operon regulatory protein and uracil phosphoribosyltransferase 2937 2919
THC0290_N_1193 3prime 2048419:2048605 + A1812 B556 C144 9.67 1.15 new transcription segment 2940 3901
THC0290_N_1196 3prime 2049572:2049668 - A1764 B546 C143 9.62 1.48 new transcription segment 2945 3453
THC0290_N_1197 repeated_region 2054587:2054964 - A1248 B419 C125 9.97 1.73 new transcription segment 2951 2354
THC0290_1778 cobS CDS 2061052:2061828 - A585 B183 C44 7.01 -1.27 Adenosylcobinamide-GDP ribazoletransferase 2961 908
THC0290_1779 bluB/cobT CDS 2061863:2063539 - A314 B119 C33 7.43 -1.68 Bifunctional protein : cob(II)yrinic acid a,c-diamide reductase and nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2962 399
THC0290_N_1199 Rfp80 indep 2063397:2064482 + A1779 B546 C143 7.74 1.22 new transcription segment 2963 3809
THC0290_N_1200 intra 2063540:2063723 - A513 B180 C44 8.10 -1.70 new transcription segment 2964 685
THC0290_1780 cobU CDS 2063724:2064236 - A606 B183 C44 9.02 -1.43 Bifunctional protein cobU : adenosylcobinamide kinase and adenosylcobinamide-phosphate guanylyltransferase 2966 1257
THC0290_N_1201 intra 2070966:2071017 + A1621 B537 C143 14.33 1.29 new transcription segment 2974 2930
THC0290_N_1207 intra 2079135:2079235 - A1091 B367 C107 10.31 2.58 new transcription segment 2987 2111
THC0290_1795 CDS 2079236:2080645 - A1091 B367 C107 11.42 2.77 Probable lipoprotein precursor 2988 2110
THC0290_N_1208 3prime 2080646:2081110 - A1088 B365 C107 10.35 2.76 new transcription segment 2989 2092
THC0290_1796 CDS 2081111:2082283 - A1088 B365 C107 12.39 3.43 Probable lipoprotein precursor 2990 2106
THC0290_N_1209 intra 2082313:2082391 - A1088 B365 C107 7.02 3.66 new transcription segment 2991 2091
THC0290_1797 CDS 2082392:2083183 - A1088 B365 C107 10.53 4.69 Protein of unknown function precursor 2992 2090
THC0290_1798 CDS 2083190:2083714 - A1088 B365 C107 10.76 4.81 Protein of unknown function containing ankyrin repeat signature 2993 2103
THC0290_1799 CDS 2083726:2084730 - A1088 B365 C107 10.79 4.62 Protein of unknown function 2994 2104
THC0290_1800 CDS 2084766:2085770 - A1088 B365 C107 11.11 4.67 Protein of unknown function 2995 2105
THC0290_1801 CDS 2085799:2087151 - A1088 B365 C107 10.08 4.49 Protein of unknown function 2996 2102
THC0290_1802 CDS 2087189:2087410 - A1088 B365 C107 11.03 5.12 Hypothetical protein 2997 2100
THC0290_1803 apbE CDS 2087394:2088356 - A1088 B365 C107 10.41 4.76 Membrane-associated protein involved in thiamine biosynthesis 2998 2101
THC0290_1804 CDS 2088365:2088802 - A1088 B365 C107 10.15 5.06 Thioredoxin family protein 2999 2081
THC0290_1805 CDS 2088958:2090196 + A1088 B365 C107 13.75 3.87 Protein of unknown function 3000 2097
THC0290_N_1210 intra 2090197:2090249 + A1088 B365 C107 10.29 4.03 new transcription segment 3001 2093
THC0290_1806 irpA CDS 2090250:2091365 + A1088 B365 C107 14.05 3.00 Iron-regulated protein A precursor 3002 2098
THC0290_1807 CDS 2091368:2092735 + A483 B172 C44 12.00 2.98 Probable vitamin K-dependent gamma-carboxylase 3003 636
THC0290_1808 fecA CDS 2092716:2095151 + A483 B172 C44 11.25 2.09 ABC-type iron(III) dicitrate-transport system component, TonB-dependent outer membrane receptor FecA precursor 3004 637
THC0290_N_1211 3prime 2094693:2095147 - A153 B59 C19 8.96 1.26 new transcription segment 3005 192
THC0290_1809 CDS 2095148:2095534 - A1491 B511 C143 10.54 1.44 Acyl-CoA hydrolase family protein 3006 2699
THC0290_1810 CDS 2095539:2096027 - A1491 B511 C143 11.38 1.57 Protein of unknown function 3008 2700
THC0290_N_1213 Rfp81 indep 2096135:2096322 - A1495 B512 C143 11.48 2.55 new transcription segment 3009 2710
THC0290_1811 CDS 2096360:2096578 - A1088 B365 C107 9.24 5.72 Protein of unknown function 3010 2096
THC0290_N_1214 3prime 2096579:2096690 - A1496 B512 C143 11.64 6.70 new transcription segment 3011 2713
THC0290_1812 (hmuY) CDS 2096691:2097335 - A1088 B365 C107 13.45 4.79 Putative heme binding lipoprotein precursor 3012 2089
THC0290_1813 CDS 2097360:2097836 - A1088 B365 C107 11.92 5.60 Probable transmembrane protein of unknown function 3013 2086
THC0290_1814 CDS 2097857:2099929 - A1088 B365 C107 10.71 5.32 Probable TonB-dependent outer membrane receptor precursor 3014 2082
THC0290_1815 CDS 2100027:2100941 + A1088 B365 C107 13.05 5.43 Protein of unknown function precursor 3015 2080
THC0290_1816 CDS 2100947:2101285 + A1088 B365 C107 12.37 6.03 Protein of unknown function 3016 2087
THC0290_N_1215 3prime 2101286:2101337 + A1717 B546 C143 6.36 4.79 new transcription segment 3017 3163
THC0290_N_1216 3prime-PT 2101338:2101475 + A1493 B512 C143 5.21 2.30 new transcription segment 3018 2708
THC0290_N_1217 5prime 2103281:2103429 + A1768 B546 C143 9.86 1.89 new transcription segment 3020 3624
THC0290_1818 CDS 2103430:2107788 + A1762 B546 C143 8.15 4.01 Protein of unknown function precursor, putative adhesin 3021 3404
THC0290_1824 CDS 2113997:2115304 - A1763 B546 C143 11.81 1.25 Protein of unknown function 3028 3437
THC0290_1825 CDS 2115307:2115978 - A1763 B546 C143 10.97 1.18 Protein of unknown function 3029 3438
THC0290_N_1220 5prime 2117337:2117446 - A1618 B535 C143 10.50 1.16 new transcription segment 3032 2925
THC0290_1828 htpG CDS 2117483:2119381 + A840 B254 C69 12.67 -1.94 Chaperone protein HtpG 3033 1756
THC0290_1831 CDS 2123616:2124782 + A1765 B546 C143 6.32 1.33 Twin-arginine translocation pathway signal sequence domain protein precusor 3036 3494
THC0290_N_1225 3prime 2131021:2131131 - A1518 B521 C143 8.61 -1.22 new transcription segment 3043 2749
THC0290_1841 phoH CDS 2141811:2142761 - A1044 B344 C102 12.77 1.32 Phosphate starvation-inducible protein PhoH 3061 2009
THC0290_1852 CDS 2152138:2154066 + A1871 B578 C149 9.35 1.03 Probable transmembrane protein of unknown function 3080 3973
THC0290_1856 CDS 2156568:2157035 - A1768 B546 C143 10.90 1.13 Probable transmembrane protein of unknown function 3087 3694
THC0290_N_1244 3prime-PT 2158851:2159374 - A1753 B546 C143 7.99 1.09 new transcription segment 3090 3350
THC0290_1865 CDS 2164658:2165821 - A1663 B542 C143 14.90 1.32 Transposase IS4 family 3103 3039
THC0290_1867 CDS 2167096:2167740 - A581 B183 C44 12.84 -1.27 Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer 3107 892
THC0290_N_1256 5prime 2172257:2172324 + A1243 B419 C125 10.44 1.17 new transcription segment 3113 2331
THC0290_1870 CDS 2172325:2172963 + A1243 B419 C125 10.29 1.63 Protein of unknown function precursor 3114 2330
THC0290_1871 CDS 2173083:2173925 - A330 B122 C33 9.66 -1.09 Asparaginase 2 3116 418
THC0290_N_1258 intra 2173926:2174028 - A610 B183 C44 8.06 -1.29 new transcription segment 3117 1283
THC0290_1872 cphB CDS 2174029:2174901 - A331 B122 C33 10.05 -1.63 Cyanophycinase 3118 431
THC0290_1874 pepX2 CDS 2177914:2180046 + A525 B180 C44 10.91 -1.30 Xaa-Pro dipeptidyl-peptidase precursor 3122 706
THC0290_N_1272 5prime 2202131:2202187 - A1707 B546 C143 11.67 1.36 new transcription segment 3156 3128
THC0290_N_1278 3prime 2208899:2209758 - A1226 B417 C125 7.60 1.02 new transcription segment 3168 2296
THC0290_1902 CDS 2209759:2210490 - A1762 B546 C143 11.45 1.75 Probable lipoprotein precursor 3170 3415
THC0290_N_1280 intra 2210491:2210662 - A283 B104 C29 8.20 1.09 new transcription segment 3172 366
THC0290_1903 CDS 2210663:2213119 - A738 B212 C55 9.88 1.04 Probable TonB-dependent outer membrane receptor precursor 3173 1612
THC0290_1904 CDS 2213126:2214817 - A740 B212 C55 10.34 1.19 Probable secreted M23/M37 family peptidase precursor 3174 1614
THC0290_1906 CDS 2215305:2215598 + A1614 B535 C143 12.37 1.12 Protein of unknown function 3176 2914
THC0290_N_1281 5prime 2215599:2215649 + A1614 B535 C143 11.41 1.32 new transcription segment 3177 2915
THC0290_miscRNA_0049 Rfp82 misc_RNA 2215650:2215756 + A1768 B546 C143 12.14 2.63 6S-Flavo RNA 3178 3730
THC0290_N_1288 3prime-PT 2222573:2222733 - A1665 B542 C143 8.00 2.58 new transcription segment 3189 3047
THC0290_1913 CDS 2222771:2223451 - A1768 B546 C143 11.89 2.53 Probable transcriptional regulatory protein, Crp/Fnr family 3190 3678
THC0290_1924 hemN CDS 2233612:2234976 - A701 B199 C52 8.19 -1.32 Oxygen-independent coproporphyrinogen III oxidase HemN 3205 1529
THC0290_N_1297 repeated_region 2239621:2239993 - A847 B256 C70 6.99 -1.87 new transcription segment 3210 1767
THC0290_N_1298 3prime 2240124:2240177 - A297 B110 C31 5.53 -1.80 new transcription segment 3211 382