Differential expression: Freshwater [Water.vs.Ctrl]

Differentially expressed genes in cells maintained during 24h in aquarium containing 10L of dechlorinated water maintained at 10°C under vigorous aeration, relative to standard laboratory condition (TYES 18°C 200 rpm OD600nm=1).

List of differentially expressed genomic elements (CDS and newly identified RNA elements).
Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.

Reference samples: LAB_a, LAB_c
Test samples: Water_a, Water_c

Locus Tag Name (v2) Feature type Location Clusters Base Expr. Delta Expr. Annotation Chromosome order Clusters order
THC0290_0001 rnr CDS 554:2728 + A1753 B546 C143 12.12 1.22 Ribonuclease R 1 3345
THC0290_tRNA_0001 tRNA 4244:4317 - A1769 B546 C143 11.18 4.37 transfer RNA-Cys 6 3789
THC0290_N_0006 Rfp1 indep 5284:5631 - A1248 B419 C125 7.44 3.16 new transcription segment 10 2357
THC0290_0006 CDS 7285:7614 + A1751 B546 C143 14.55 1.91 Hypothetical protein precursor 11 3336
THC0290_0007 CDS 7614:7964 + A1768 B546 C143 14.54 1.28 Probable transmembrane protein of unknown function 12 3719
THC0290_0008 CDS 7968:8222 + A1768 B546 C143 14.49 1.56 Protein of unknown function 13 3720
THC0290_N_0008 3prime-PT 8228:8499 + A1768 B546 C143 8.87 4.27 new transcription segment 15 3687
THC0290_0009 CDS 8244:9227 - A1710 B546 C143 13.33 2.90 Band 7 family protein 16 3142
THC0290_N_0010 Rfp2 indep 10630:10929 + A1248 B419 C125 6.67 2.51 new transcription segment 19 2358
THC0290_N_0012 3prime 17019:17181 + A409 B155 C43 9.08 -1.63 new transcription segment 24 524
THC0290_0014 CDS 17182:18030 + A646 B183 C44 9.53 -1.87 Probable SAM-dependent methyltransferase 25 1408
THC0290_N_0013 3prime 18031:18294 + A646 B183 C44 8.59 -2.64 new transcription segment 26 1409
THC0290_0015 CDS 18295:18858 + A600 B183 C44 11.76 -1.71 Probable outer membrane lipoprotein precursor, OmpH family 27 1054
THC0290_0018 CDS 22763:23272 - A733 B210 C55 10.18 -1.07 Probable cAMP-binding protein 34 1603
THC0290_N_0023 3prime 32460:32570 + A1747 B546 C143 6.61 1.11 new transcription segment 46 3264
THC0290_N_0025 intra 44155:44282 + A245 B87 C26 10.13 -2.68 new transcription segment 50 320
THC0290_0029 elaA CDS 47729:48178 + A1768 B546 C143 10.48 1.85 ElaA protein 55 3677
THC0290_N_0028 3prime 48179:48337 + A1817 B557 C145 8.62 2.13 new transcription segment 57 3908
THC0290_N_0029 Rfp3 indep 49141:49425 + A1768 B546 C143 9.63 2.24 new transcription segment 58 3650
THC0290_N_0030 5prime 49569:49619 + A1713 B546 C143 10.80 1.19 new transcription segment 59 3152
THC0290_0033 gldH CDS 52515:53027 + A595 B183 C44 11.38 -1.34 Gliding motility lipoprotein precursor GldH 63 967
THC0290_0034 mrcA CDS 53033:55357 + A231 B83 C25 11.28 -1.09 Penicillin-binding protein 1A 64 302
THC0290_N_0032 intra 55358:55525 + A231 B83 C25 9.21 -1.79 new transcription segment 65 303
THC0290_0035 atoD CDS 55526:56224 + A605 B183 C44 11.60 -1.52 3-oxoacid CoA-transferase subunit A family protein AtoD 67 1236
THC0290_0036 CDS 56236:59862 + A618 B183 C44 11.54 -1.53 Probable type I endonuclease-methyltransferase fusion protein 68 1323
THC0290_0037 atoA CDS 59864:60520 + A618 B183 C44 10.61 -1.38 3-oxoacid CoA-transferase subunit B family protein AtoA 69 1322
THC0290_N_0033 3prime 60521:60568 + A691 B195 C50 4.65 -1.58 new transcription segment 70 1497
THC0290_N_0037 Rfp4 indep 64013:64179 - A699 B199 C52 13.08 -2.53 new transcription segment 77 1517
THC0290_0041 CDS 64242:64637 - A700 B199 C52 12.02 -2.83 Cytochrome c551/c552 family protein 78 1523
THC0290_N_0038 intra 64654:64878 - A601 B183 C44 8.93 -2.26 new transcription segment 79 1126
THC0290_0042 hemB CDS 64879:65871 - A588 B183 C44 8.91 -1.21 Porphobilinogen synthase 80 930
THC0290_0043 CDS 65876:66910 - A588 B183 C44 7.86 -1.49 Protein of unknown function 81 928
THC0290_0046 CDS 68389:68934 - A588 B183 C44 9.59 -1.17 Probable ribosomal-protein-amino-adic N-acetyltransferase 84 933
THC0290_0047 CDS 68944:69930 - A588 B183 C44 9.70 -1.15 Hypothetical lipoprotein precursor 85 934
THC0290_N_0040 intra 70975:71053 - A588 B183 C44 9.00 -1.53 new transcription segment 88 926
THC0290_0052 CDS 74181:75047 + A1712 B546 C143 10.45 1.57 Probable transcriptional regulator, AraC family 94 3150
THC0290_0053 hemH CDS 75051:76070 + A1096 B368 C108 11.08 1.47 Ferrochelatase 95 2117
THC0290_N_0049 intra 82738:82791 - A451 B168 C44 7.23 -1.50 new transcription segment 110 583
THC0290_0063 CDS 85173:85406 + A1768 B546 C143 13.91 2.13 Hypothetical protein 113 3648
THC0290_0072 proC CDS 94366:95142 - A605 B183 C44 11.35 -1.92 Pyrroline-5-carboxylate reductase 128 1237
THC0290_0073 mgtE CDS 95153:96502 - A598 B183 C44 11.28 -1.69 Mg2+ transporter MgtE 129 992
THC0290_0074 ksgA CDS 96492:97271 - A598 B183 C44 11.20 -1.67 Dimethyladenosine transferase 130 993
THC0290_N_0058 intra 97272:97344 - A598 B183 C44 10.39 -1.85 new transcription segment 131 998
THC0290_0075 CDS 97345:97656 - A486 B172 C44 10.97 -1.74 Protein of unknown function 132 648
THC0290_0076 CDS 97729:99507 - A485 B172 C44 9.66 -1.48 Tetratricopeptide repeat domain protein precursor 134 647
THC0290_N_0060 intra 99508:99741 - A486 B172 C44 11.49 -1.96 new transcription segment 135 649
THC0290_0077 serS CDS 99742:101013 - A484 B172 C44 12.43 -2.45 Serine--tRNA ligase 136 645
THC0290_N_0061 intra 101014:101224 - A484 B172 C44 11.91 -2.70 new transcription segment 137 646
THC0290_0078 CDS 101225:102457 - A484 B172 C44 12.43 -2.94 Protein of unknown function precursor 138 643
THC0290_0079 CDS 102454:102894 - A484 B172 C44 12.90 -2.91 Protein of unknown function 139 644
THC0290_0080 CDS 102896:104074 - A484 B172 C44 12.94 -2.76 Probable lipoprotein precursor 140 642
THC0290_0081 mntH CDS 104165:106036 + A1089 B366 C107 11.81 -1.26 Probable manganese transport protein mntH 141 2108
THC0290_0082 sirR CDS 106330:106983 + A1072 B359 C105 11.29 -1.18 Probable metal-dependent transcriptional regulator 143 2043
THC0290_tRNA_0002 tRNA 109057:109130 - A1769 B546 C143 13.04 4.43 transfer RNA-Asn 149 3770
THC0290_N_0067 intra 110638:110698 - A643 B183 C44 5.16 -2.59 new transcription segment 152 1398
THC0290_0087 CDS 112762:113097 - A1654 B542 C143 9.96 3.41 Probable single-stranded DNA-binding protein 154 3023
THC0290_0090 pepO CDS 115174:117234 - A600 B183 C44 11.83 -1.81 M13 family metallopeptidase PepO precursor 160 1070
THC0290_0093 feoA CDS 121549:121791 + A1494 B512 C143 10.78 -1.46 Ferrous iron transport protein A 163 2709
THC0290_0094 feoB CDS 121791:123884 + A1084 B365 C107 8.88 -2.54 Ferrous iron transport protein B 164 2074
THC0290_N_0071 intra 123885:124433 + A1084 B365 C107 9.12 -2.12 new transcription segment 165 2075
THC0290_0096 CDS 125431:125595 - A1768 B546 C143 6.41 2.58 Hypothetical protein 167 3577
THC0290_N_0074 3prime 129899:129947 + A1188 B407 C123 6.15 1.99 new transcription segment 174 2228
THC0290_N_0076 5prime 131417:131569 + A205 B75 C24 12.58 -1.07 new transcription segment 177 256
THC0290_0102 CDS 131570:132853 + A204 B75 C24 13.01 -1.62 Protein of unknown function 178 252
THC0290_0103 CDS 133119:133640 + A204 B75 C24 12.93 -1.98 Protein of unknown function precursor 180 254
THC0290_0104 CDS 133660:134139 + A204 B75 C24 12.94 -2.11 Probable lipoprotein precursor 181 255
THC0290_0105 CDS 134151:135113 + A204 B75 C24 12.63 -1.75 Protein of unknown function precursor 182 253
THC0290_0106 CDS 135128:136084 + A204 B75 C24 13.20 -1.77 Protein of unknown function precursor 183 251
THC0290_N_0078 3prime 136085:136144 + A1747 B546 C143 8.58 2.79 new transcription segment 184 3290
THC0290_N_0079 3prime 136118:136225 - A1763 B546 C143 11.61 3.51 new transcription segment 185 3432
THC0290_0107 CDS 136226:138043 - A1763 B546 C143 10.83 3.87 Putative outer membrane protein precursor 186 3431
THC0290_0108 CDS 138173:140128 - A1560 B526 C143 9.53 1.20 Penicillin-binding protein 187 2823
THC0290_0109 CDS 140135:140650 - A1762 B546 C143 10.65 1.17 Hypothetical protein 188 3390
THC0290_0110 CDS 140658:140933 - A1768 B546 C143 12.12 1.31 Putative plasmid stabilization system protein 189 3633
THC0290_0111 CDS 140930:141169 - A1768 B546 C143 13.05 1.79 Hypothetical protein 190 3634
THC0290_0112 radA CDS 141203:142564 - A601 B183 C44 9.22 -1.48 DNA repair protein RadA 191 1117
THC0290_0116 panC CDS 145223:146071 - A605 B183 C44 10.32 -1.30 Pantoate--beta-alanine ligase 195 1248
THC0290_0119 glmS CDS 148660:150507 + A599 B183 C44 12.90 -1.01 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 198 1018
THC0290_0121 CDS 153715:155214 + A1785 B548 C143 12.40 1.03 Probable lipoprotein precursor 201 3836
THC0290_0122 atpD CDS 155419:156930 + A600 B183 C44 13.50 -1.01 ATP synthase beta subunit 204 1096
THC0290_N_0086 intra 156931:157009 + A639 B183 C44 9.57 -2.81 new transcription segment 205 1387
THC0290_0123 atpC CDS 157010:157291 + A600 B183 C44 13.29 -1.60 ATP synthase epsilon subunit 206 1097
THC0290_0128 CDS 159521:159862 + A1244 B419 C125 12.30 1.47 Protein of unknown function precursor 213 2347
THC0290_0129 CDS 159979:160953 + A1248 B419 C125 12.96 2.16 Putative outer membrane protein precursor 215 2360
THC0290_0130 CDS 161008:162009 + A1715 B546 C143 9.62 1.89 Probable acyl-protein synthetase 217 3160
THC0290_N_0091 3prime 162010:162767 + A1820 B557 C145 7.99 2.21 new transcription segment 218 3912
THC0290_0134 CDS 164278:164808 + A1448 B502 C142 9.93 2.09 Probable transmembrane protein of unknown function 227 2637
THC0290_N_0096 3prime 164809:165563 + A191 B70 C21 7.85 1.94 new transcription segment 229 237
THC0290_N_0097 repeated_region 165536:166702 - A677 B189 C46 13.22 -2.39 new transcription segment 230 1468
THC0290_0136 batD CDS 166703:168505 - A677 B189 C46 10.09 -1.59 BatD protein 231 1467
THC0290_0137 batC CDS 168527:169240 - A677 B189 C46 10.14 -1.13 BatC protein 232 1463
THC0290_N_0098 repeated_region 169241:170135 - A677 B189 C46 14.84 -1.76 new transcription segment 233 1465
THC0290_0138 batB CDS 170136:171176 - A677 B189 C46 10.41 -1.65 BatB protein 234 1461
THC0290_N_0099 intra 171177:171320 - A677 B189 C46 10.40 -1.36 new transcription segment 235 1464
THC0290_0139 CDS 171321:171701 - A677 B189 C46 10.27 -1.40 Protein of unknown function 236 1462
THC0290_N_0100 intra 171702:171755 - A677 B189 C46 12.53 -1.75 new transcription segment 237 1466
THC0290_0140 batA CDS 171756:172757 - A677 B189 C46 10.38 -1.45 BatA protein 238 1460
THC0290_0141 CDS 172759:174345 - A677 B189 C46 10.15 -1.57 Probable transmembrane protein of unknown function 239 1459
THC0290_N_0101 repeated_region 174346:176105 - A672 B188 C46 15.57 -1.38 new transcription segment 240 1448
THC0290_0142 CDS 176106:176972 - A545 B180 C44 11.37 -1.97 Protein of unknown function 241 770
THC0290_0146 CDS 180146:180661 + A600 B183 C44 12.16 -1.05 Probable outer membrane protein precursor, OmpA family 247 1092
THC0290_0147 phnA CDS 180747:181328 + A515 B180 C44 10.31 -1.41 PhnA protein 249 687
THC0290_N_0105 3prime 181329:181417 - A1593 B534 C143 9.80 1.93 new transcription segment 250 2868
THC0290_N_0107 Rfp11 indep 182563:182671 + A1768 B546 C143 7.02 6.19 new transcription segment 253 3598
THC0290_0149 CDS 182667:183833 - A819 B248 C68 13.42 1.19 Probable alcohol dehydrogenase 255 1722
THC0290_N_0109 Rfp12 indep 184225:184363 + A1768 B546 C143 8.29 2.39 new transcription segment 257 3665
THC0290_N_0112 intra 187683:187830 - A494 B173 C44 9.36 -1.89 new transcription segment 259 660
THC0290_0152 pgi CDS 187831:189474 - A595 B183 C44 11.06 -1.38 Glucose-6-phosphate isomerase 260 952
THC0290_tRNA_0003 tRNA 191432:191514 + A1769 B546 C143 14.58 3.09 transfer RNA-Leu 265 3761
THC0290_tRNA_0004 tRNA 191804:191888 - A1768 B546 C143 10.49 4.23 transfer RNA-Leu 267 3657
THC0290_0157 CDS 194650:195750 + A1765 B546 C143 9.65 3.19 Probable transmembrane protein of unknown function 272 3507
THC0290_N_0123 3prime 198042:198354 - A616 B183 C44 8.69 1.10 new transcription segment 275 1303
THC0290_N_0125 3prime 201124:201191 - A1850 B569 C149 10.04 3.42 new transcription segment 278 3948
THC0290_0162 kbl CDS 202693:203889 - A600 B183 C44 11.72 -1.22 Glycine C-acetyltransferase 281 1071
THC0290_N_0128 3prime 207980:208039 + A1604 B535 C143 9.09 1.25 new transcription segment 286 2886
THC0290_N_0130 Rfp14 indep 208381:208488 + A1765 B546 C143 8.57 1.34 new transcription segment 288 3520
THC0290_0166 CDS 210086:211081 + A1768 B546 C143 8.96 1.22 Protein of unknown function 291 3717
THC0290_N_0133 3prime 211082:211240 + A1768 B546 C143 8.25 2.37 new transcription segment 294 3681
THC0290_0170 CDS 213837:215033 - A1083 B365 C107 14.11 -2.92 Probable cell surface protein (Leucine-rich repeat protein) precursor 297 2068
THC0290_0171 CDS 215347:216612 - A1083 B365 C107 12.92 -3.07 Probable cell surface protein (Leucine-rich repeat protein) precursor 299 2066
THC0290_0172 CDS 216630:217619 - A1083 B365 C107 12.96 -2.48 Probable cell surface protein (Leucine-rich repeat protein) precursor 300 2071
THC0290_0173 CDS 217635:218969 - A1083 B365 C107 13.58 -2.65 Probable cell surface protein (Leucine-rich repeat protein) precursor 301 2069
THC0290_0174 CDS 219283:220551 - A1083 B365 C107 12.97 -2.87 Probable cell surface protein (Leucine-rich repeat protein) precursor 302 2072
THC0290_0175 CDS 220567:221559 - A1083 B365 C107 13.17 -3.22 Probable cell surface protein (Leucine-rich repeat protein) 303 2073
THC0290_0176 CDS 221575:222702 - A1083 B365 C107 13.19 -2.95 Probable cell surface protein (Leucine-rich repeat protein) precursor 304 2070
THC0290_N_0139 intra 222703:223027 - A1083 B365 C107 11.64 -3.66 new transcription segment 305 2065
THC0290_0177 CDS 223028:224638 - A1083 B365 C107 14.27 -1.91 Probable cell surface protein (Leucine-rich repeat protein) precursor 306 2059
THC0290_N_0140 repeated_region 224639:224914 - A1083 B365 C107 9.43 -2.81 new transcription segment 307 2061
THC0290_0178 CDS 224965:225888 - A1083 B365 C107 13.38 -2.77 Probable cell surface protein (Leucine-rich repeat protein) precursor 308 2067
THC0290_0179 CDS 225904:227169 - A1083 B365 C107 14.39 -3.15 Probable cell surface protein (Leucine-rich repeat protein) precursor 309 2063
THC0290_0180 CDS 227183:228379 - A1083 B365 C107 14.58 -3.28 Probable cell surface protein (Leucine-rich repeat protein) precursor 310 2064
THC0290_0181 CDS 228393:229796 - A1083 B365 C107 11.98 -2.75 Probable cell surface protein (Leucine-rich repeat protein) precursor 311 2060
THC0290_N_0142 repeated_region 229797:230072 - A1083 B365 C107 9.23 -3.02 new transcription segment 312 2062
THC0290_0182 CDS 230123:231112 - A1083 B365 C107 10.81 -3.73 Probable cell surface protein (Leucine-rich repeat protein) precursor 313 2056
THC0290_0183 CDS 231127:232047 - A1083 B365 C107 12.35 -3.52 Probable cell surface protein (Leucine-rich repeat protein) precursor 314 2057
THC0290_0184 CDS 232062:233117 - A1083 B365 C107 10.37 -3.57 Probable cell surface protein (Leucine-rich repeat protein) precursor 315 2058
THC0290_0185 CDS 233132:234121 - A1088 B365 C107 9.99 -4.31 Probable cell surface protein (Leucine-rich repeat protein) precursor 316 2088
THC0290_0186 CDS 234136:235122 - A1088 B365 C107 10.59 -3.11 Probable cell surface protein (Leucine-rich repeat protein) precursor 317 2085
THC0290_N_0144 intra 237144:237208 + A586 B183 C44 10.58 -1.94 new transcription segment 320 914
THC0290_0190 CDS 238052:238456 - A480 B171 C44 9.38 -1.51 Probable protein chain release factor 324 633
THC0290_0191 CDS 238456:240570 - A581 B183 C44 9.67 -2.02 Probable bifunctional protein : transcriptional regulator NadR family and of unknown function 325 890
THC0290_N_0147 3prime 244080:244141 + A1670 B542 C143 8.96 2.89 new transcription segment 331 3059
THC0290_0200 CDS 250231:250752 + A1715 B546 C143 11.93 1.64 Hypothetical protein 340 3158
THC0290_0201 CDS 250719:251186 - A1765 B546 C143 9.78 2.27 Adenylate cyclase family protein 341 3466
THC0290_N_0154 3prime 250753:251441 + A1248 B419 C125 9.69 1.40 new transcription segment 342 2356
THC0290_N_0155 5prime 251187:251301 - A1768 B546 C143 9.93 2.04 new transcription segment 343 3653
THC0290_0205 purN CDS 255026:255595 - A526 B180 C44 8.47 -1.11 Phosphoribosylglycinamide formyltransferase 351 711
THC0290_0207 fabF CDS 256359:257609 + A605 B183 C44 13.08 -1.34 3-oxoacyl-(acyl-carrier-protein) synthase II 356 1219
THC0290_0208 rnc CDS 257618:258358 + A600 B183 C44 9.68 -1.38 Ribonuclease III 357 1113
THC0290_N_0164 intra 258359:258452 + A601 B183 C44 9.08 -1.22 new transcription segment 358 1120
THC0290_0209 CDS 258470:258949 + A970 B307 C84 10.45 1.32 Protein of unknown function 359 1916
THC0290_N_0167 intra 261251:261325 - A50 B27 C13 8.37 -1.07 new transcription segment 363 57
THC0290_0212 CDS 261326:261682 - A609 B183 C44 8.02 -1.21 Protein of unknown function MmcQ 364 1271
THC0290_0214 CDS 262521:263654 - A609 B183 C44 7.79 -1.53 Probable coproporphyrinogen oxidase 366 1280
THC0290_N_0169 Rfp17 indep 266572:266801 + A1747 B546 C143 8.54 1.21 new transcription segment 373 3298
THC0290_0219 CDS 266940:267446 + A1747 B546 C143 8.08 1.16 Hypothetical protein 374 3297
THC0290_N_0171 intra 268051:268199 - A1790 B549 C143 12.19 1.43 new transcription segment 377 3845
THC0290_0221 CDS 268200:268898 - A1790 B549 C143 12.54 1.48 Protein of unknown function precursor 378 3844
THC0290_0222 CDS 268913:269659 - A1762 B546 C143 11.81 2.03 Protein of unknown function precursor 379 3403
THC0290_N_0174 3prime 274463:274834 + A1726 B546 C143 8.75 1.49 new transcription segment 386 3187
THC0290_N_0184 Rfp19 indep 297507:297566 + A1408 B485 C140 15.28 1.70 new transcription segment 410 2582
THC0290_0242 CDS 297963:298367 - A1768 B546 C143 10.99 1.16 Probable lyase 413 3625
THC0290_0244 CDS 298971:300170 + A1765 B546 C143 11.68 1.33 Probable ABC-type transport system, permease component 416 3519
THC0290_N_0186 3prime 300171:300903 + A1768 B546 C143 8.16 3.16 new transcription segment 417 3688
THC0290_0246 aroA CDS 301503:302732 - A601 B183 C44 8.53 -1.60 3-phosphoshikimate 1-carboxyvinyltransferase 420 1121
THC0290_0248 CDS 303303:303749 - A358 B136 C39 8.41 -1.78 Protein of unknown function 423 459
THC0290_0249 CDS 303781:304143 - A359 B136 C39 10.32 -2.52 Hypothetical protein Putative pseudogene 424 460
THC0290_N_0189 intra 304144:304193 - A678 B190 C47 7.45 -2.13 new transcription segment 425 1469
THC0290_0250 CDS 304194:304376 - A357 B136 C39 8.79 -1.68 Hypothetical protein 426 457
THC0290_0251 CDS 304650:305642 - A372 B141 C39 8.37 -1.03 Protein of unknown function 428 474
THC0290_0252 CDS 305655:308825 - A588 B183 C44 8.60 -1.40 Probable type II endonuclease-methyltransferase fusion protein 429 924
THC0290_0254 rsgA CDS 309432:310412 - A721 B205 C53 10.39 1.08 Putative ribosome biogenesis GTPase RsgA 432 1575
THC0290_N_0193 5prime 310413:310478 - A721 B205 C53 9.46 1.06 new transcription segment 433 1576
THC0290_0255 CDS 310522:311604 - A721 B205 C53 9.91 1.22 Putative phospho-2-dehydro-3-deoxyheptonate aldolase 434 1574
THC0290_0256 aspC3 CDS 311724:312935 - A719 B205 C53 8.42 1.79 Probable aspartate transaminase AspC3 436 1568
THC0290_0257 pheA CDS 312932:313768 - A719 B205 C53 8.20 1.87 Prephenate dehydratase 437 1569
THC0290_0262 metX CDS 318651:319652 - A726 B207 C54 5.60 1.49 Homoserine O-acetyltransferase 446 1584
THC0290_0263 metY CDS 319731:321023 - A726 B207 C54 6.96 2.07 Probable O-acetylhomoserine aminocarboxypropyltransferase 447 1585
THC0290_N_0198 Rfp20 indep 321293:321392 - A1435 B498 C142 7.55 3.88 new transcription segment 448 2619
THC0290_0271 CDS 329327:329941 + A1731 B546 C143 8.31 1.39 Truncated Eco57I restriction-modification methylase family protein 460 3199
THC0290_0276 CDS 334046:334363 - A1709 B546 C143 14.76 1.59 Thioredoxin family protein 468 3133
THC0290_N_0208 3prime 335720:335801 - A329 B122 C33 11.63 -1.12 new transcription segment 471 417
THC0290_0279 CDS 336416:337207 - A1671 B543 C143 8.06 1.43 Hypothetical protein precursor 473 3063
THC0290_0281 gene 337517:337570 + A1747 B546 C143 9.04 1.57 Truncated protein C-terminal region 475 3274
THC0290_0283 gene 338551:338808 + A595 B183 C44 7.99 -1.17 Fragment of hypothetical protein (part 1) 477 965
THC0290_0287 metK CDS 343737:344987 - A854 B257 C70 11.77 -1.17 Methionine adenosyltransferase 484 1776
THC0290_0289 CDS 346364:348646 - A1343 B465 C135 10.06 1.54 Protein of unknown function precursor, putative immunoreactive 84 kDa antigen 489 2494
THC0290_N_0216 3prime 355371:355427 + A1608 B535 C143 10.49 3.49 new transcription segment 497 2896
THC0290_N_0217 3prime 355417:355516 - A1643 B540 C143 9.76 2.13 new transcription segment 498 2985
THC0290_0296 CDS 355517:355957 - A1768 B546 C143 10.98 1.78 Probable cytosine/adenosine deaminase 499 3623
THC0290_0297 CDS 356020:356607 + A1243 B419 C125 9.97 2.35 Protein of unknown function 500 2328
THC0290_0298 dxs CDS 356654:358429 + A1252 B419 C125 9.32 1.24 1-deoxy-D-xylulose-5-phosphate synthase 501 2370
THC0290_0299 CDS 358481:361225 - A605 B183 C44 13.85 -1.55 Probable M36 fungalysin family metalloprotease precursor 502 1224
THC0290_N_0221 intra 366003:366148 - A230 B83 C25 10.88 -1.36 new transcription segment 507 300
THC0290_0304 CDS 370460:371698 + A1348 B467 C136 9.27 1.77 Probable transmembrane protein of unknown function 510 2500
THC0290_N_0227 3prime-PT 380006:380541 + A1168 B401 C121 7.34 2.61 new transcription segment 521 2203
THC0290_0312 yggG CDS 381240:382067 + A1762 B546 C143 13.79 1.16 Putative secreted M48 family metalloprotease YggG precursor 523 3398
THC0290_0321 CDS 392440:393687 + A1765 B546 C143 8.74 1.11 Protein of unknown function 537 3465
THC0290_0324 CDS 395386:395604 + A1767 B546 C143 11.59 1.07 Hypothetical protein 541 3574
THC0290_0330 CDS 399755:400099 - A1767 B546 C143 9.39 1.40 Putative transcriptional regulator 552 3572
THC0290_N_0243 5prime 400566:400739 + A1763 B546 C143 9.91 3.40 new transcription segment 554 3445
THC0290_0340 ubiE CDS 417706:418437 - A68 B33 C14 11.03 1.09 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE 565 78
THC0290_N_0248 Rfp25 indep 418605:418919 + A1760 B546 C143 13.66 5.27 new transcription segment 566 3379
THC0290_N_0249 3prime 418955:419131 - A557 B183 C44 8.19 -1.20 new transcription segment 567 814
THC0290_N_0250 intra 423143:423212 - A605 B183 C44 9.74 -1.28 new transcription segment 572 1247
THC0290_N_0252 3prime 424075:424125 - A689 B194 C49 8.36 2.89 new transcription segment 576 1495
THC0290_0349 CDS 427298:429790 + A600 B183 C44 10.74 -1.05 Probable outer membrane protein precursor 582 1094
THC0290_0350 ppa CDS 430070:430600 + A600 B183 C44 12.81 -1.17 Inorganic diphosphatase 584 1090
THC0290_0354 rpbA CDS 438303:438704 - A971 B307 C84 14.14 1.93 Putative RNA-binding protein RbpA 591 1918
THC0290_0357 rimM CDS 440423:440947 + A600 B183 C44 11.10 -1.30 16S rRNA processing protein RimM 595 1111
THC0290_N_0262 intra 440948:441076 + A600 B183 C44 10.17 -1.24 new transcription segment 596 1112
THC0290_0358 yfiC CDS 441077:441781 + A600 B183 C44 8.64 -1.21 Protein of unknown function YfiC 597 1057
THC0290_N_0263 3prime-PT 441466:441936 - A1760 B546 C143 9.45 2.78 new transcription segment 598 3375
THC0290_N_0269 3prime-PT 448689:448837 - A1795 B549 C143 9.39 5.30 new transcription segment 612 3859
THC0290_N_0270 3prime 448810:448861 + A1363 B469 C136 10.33 1.23 new transcription segment 613 2526
THC0290_N_0271 3prime 448838:448909 - A1795 B549 C143 10.98 7.23 new transcription segment 614 3861
THC0290_N_0272 3prime-PT 448862:449419 + A1351 B467 C136 9.71 2.90 new transcription segment 615 2509
THC0290_0367 CDS 448910:449260 - A1795 B549 C143 13.10 5.99 Protein of unknown function precursor 616 3860
THC0290_0368 CDS 449469:450680 - A1670 B542 C143 9.02 3.31 Probable lipoprotein precursor 617 3060
THC0290_0369 CDS 450870:453704 - A1670 B542 C143 7.97 2.80 Probable TonB-dependent outer membrane receptor precursor 618 3061
THC0290_0370 phoP CDS 453885:454571 + A1767 B546 C143 10.97 2.28 Two-component system response regulatory protein involved in phosphate regulation 619 3567
THC0290_0372 oprP CDS 455757:457094 + A1492 B512 C143 10.56 1.83 Probable phosphate-selective porin precursor 621 2706
THC0290_0373 pstS CDS 457114:457947 + A1492 B512 C143 11.59 1.81 ABC-type phosphate-transport system, binding protein precursor component PstS 622 2707
THC0290_N_0274 intra 457948:458037 + A1492 B512 C143 7.47 1.08 new transcription segment 623 2705
THC0290_0374 pstC CDS 458038:459189 + A1492 B512 C143 10.24 1.17 ABC-type phosphate-transport system, permease component PstC 624 2701
THC0290_0379 CDS 462838:463659 - A1670 B542 C143 7.82 2.26 Protein of unknown function 629 3062
THC0290_0383 CDS 465657:466046 - A1766 B546 C143 8.85 1.80 Protein of unknown function precursor 636 3565
THC0290_0392 CDS 477872:478558 + A1711 B546 C143 10.10 1.48 Protein of unknown function precursor 649 3148
THC0290_N_0282 3prime 478559:479025 + A1711 B546 C143 9.51 1.64 new transcription segment 651 3146
THC0290_0395 CDS 481952:482293 - A1413 B488 C140 5.78 3.54 Hypothetical protein 655 2588
THC0290_N_0285 3prime 482258:482799 + A1362 B469 C136 7.00 1.07 new transcription segment 656 2525
THC0290_tRNA_0008 tRNA 483382:483469 - A1769 B546 C143 12.63 4.51 transfer RNA-Leu 658 3763
THC0290_tRNA_0009 tRNA 483510:483585 - A1769 B546 C143 13.12 4.20 transfer RNA-Gly 659 3765
THC0290_0397 mutS CDS 483724:486324 - A595 B183 C44 9.86 -1.64 DNA mismatch repair protein MutS 660 953
THC0290_0399 CDS 487057:487605 + A1753 B546 C143 9.34 1.45 Probable tRNA/rRNA methyltransferase 663 3351
THC0290_N_0290 3prime 487606:488796 + A1644 B540 C143 7.61 1.13 new transcription segment 665 2987
THC0290_0401 sppA CDS 488868:490631 + A1395 B479 C139 10.86 1.10 Protease IV (signal peptide peptidase) 667 2569
THC0290_0408 galE CDS 499324:500355 + A601 B183 C44 11.16 -1.08 UDP-glucose 4-epimerase 681 1140
THC0290_N_0298 3prime-PT 500352:500565 - A1760 B546 C143 9.81 2.78 new transcription segment 682 3376
THC0290_0409 CDS 500600:500857 - A1613 B535 C143 15.24 1.46 Hypothetical lipoprotein precursor 684 2905
THC0290_N_0303 intra 501925:502073 - A587 B183 C44 7.22 -1.61 new transcription segment 687 920
THC0290_0415 CDS 505149:506246 - A1417 B489 C140 11.77 1.17 Fatty acid desaturase 694 2599
THC0290_0416 gidB CDS 506352:506981 + A1760 B546 C143 10.28 1.06 Methyltransferase GidB 695 3370
THC0290_0418 apaG CDS 509450:509836 - A1702 B546 C143 13.32 1.61 Protein ApaG 700 3120
THC0290_0424 CDS 514770:516161 - A1719 B546 C143 9.42 2.54 Probable outer membrane efflux protein precursor 707 3167
THC0290_0425 CDS 516165:517523 - A1719 B546 C143 10.40 3.50 Probable ABC-type transport system, membrane fusion efflux protein component 708 3168
THC0290_0426 CDS 517529:519190 - A1719 B546 C143 10.54 4.03 Probable ABC-type transport system, ATPase and permease components 709 3169
THC0290_0427 CDS 519196:519870 - A1719 B546 C143 10.41 4.81 Probable transcriptional regulator, TetR family 710 3166
THC0290_0429 CDS 521589:522020 + A1509 B519 C143 8.86 1.38 Hypothetical transmembrane protein 712 2728
THC0290_N_0311 intra 524398:524889 + A1765 B546 C143 9.10 1.41 new transcription segment 716 3534
THC0290_miscRNA_0002 misc_RNA 524890:524985 + A1765 B546 C143 11.04 2.05 TPP riboswitch [THI element] 717 3484
THC0290_N_0312 intra 524986:525051 + A729 B209 C54 11.02 1.59 new transcription segment 718 1595
THC0290_0431 thiS CDS 525052:525258 + A730 B209 C54 7.66 1.09 Thiamine biosynthesis protein ThiS 719 1598
THC0290_0433 thiE1 CDS 527232:527831 + A728 B209 C54 5.79 -2.32 Thiamine-phosphate diphosphorylase 723 1589
THC0290_0434 thiD CDS 527804:528562 + A728 B209 C54 5.75 -1.40 Phosphomethylpyrimidine kinase 724 1593
THC0290_0436 thiG CDS 529175:529945 + A728 B209 C54 6.37 -1.02 Thiazole biosynthesis protein ThiG 726 1594
THC0290_0438 thiF CDS 531214:531924 + A728 B209 C54 5.87 -1.90 Molybdopterin and thiamine biosynthesis protein 729 1591
THC0290_0453 ilvD CDS 549225:550901 - A1197 B412 C124 6.22 1.18 Dihydroxy-acid dehydratase 750 2240
THC0290_N_0328 3prime-PT 553432:553812 + A87 B41 C15 8.21 1.53 new transcription segment 756 103
THC0290_0456 CDS 553650:554273 - A702 B199 C52 11.77 -2.47 Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer 757 1530
THC0290_0457 tsf CDS 554438:555262 - A599 B183 C44 12.79 -1.90 Elongation factor Ts (EF-Ts) 758 1008
THC0290_N_0331 intra 555263:555363 - A599 B183 C44 11.07 -3.63 new transcription segment 759 1009
THC0290_0458 rpsB CDS 555364:556164 - A638 B183 C44 13.73 -1.68 30S ribosomal protein S2 760 1381
THC0290_N_0332 intra 556165:556317 - A638 B183 C44 14.55 -1.35 new transcription segment 761 1382
THC0290_0461 nrdA CDS 557960:560380 - A382 B145 C41 11.74 -1.25 Ribonucleoside-diphosphate reductase, alpha subunit 765 490
THC0290_0465 CDS 563356:563559 + A1753 B546 C143 13.06 1.64 Hypothetical protein 772 3354
THC0290_0466 CDS 563559:564167 + A1753 B546 C143 11.52 1.21 Putative pyridine nucleotide-disulphide oxidoreductase, class-II family protein 773 3353
THC0290_N_0336 3prime 564168:564864 + A1252 B419 C125 8.74 2.63 new transcription segment 775 2374
THC0290_N_0339 3prime-PT 567081:567646 - A1760 B546 C143 8.85 4.15 new transcription segment 782 3374
THC0290_0470 CDS 567208:567639 + A1768 B546 C143 12.82 1.96 Protein of unknown function 783 3644
THC0290_N_0343 5prime 568633:568691 + A962 B306 C84 4.92 -1.61 new transcription segment 786 1904
THC0290_tRNA_0011 tRNA 576781:576857 + A762 B226 C62 16.25 1.26 transfer RNA-Ala 795 1637
THC0290_0475 gene 580335:580526 - A1765 B546 C143 8.98 1.51 Transposase (fragment) 799 3490
THC0290_0476 gene 580874:581557 - A1744 B546 C143 5.57 1.56 Fragment of transposase (fragment) (part 1) 801 3228
THC0290_0477 gene 581578:581844 - A1768 B546 C143 7.84 2.39 Truncated transposase IS256 family, N-terminal region 802 3618
THC0290_N_0351 repeated_region 585398:586012 - A1765 B546 C143 9.28 1.65 new transcription segment 808 3522
THC0290_0482 CDS 586087:587670 + A1765 B546 C143 9.25 2.54 Transposase IS1182 family 809 3526
THC0290_0483 CDS 587775:588839 - A1765 B546 C143 9.63 1.31 Hypothetical transmembrane protein 810 3470
THC0290_N_0354 5prime 589619:589720 - A1747 B546 C143 8.43 1.11 new transcription segment 814 3300
THC0290_0485 CDS 589753:591324 + A1765 B546 C143 9.15 2.15 Transposase IS1182 family 815 3527
THC0290_0487 CDS 592935:594287 + A841 B255 C69 10.98 -2.96 Protein of unknown function 817 1757
THC0290_0488 CDS 594274:594957 + A841 B255 C69 10.21 -2.60 Protein of unknown function 818 1758
THC0290_0496 gene 601969:602310 + A1765 B546 C143 8.98 1.52 Truncated transposase IS1182 family 831 3525
THC0290_0502 CDS 608390:609994 + A1765 B546 C143 9.03 2.11 Transposase IS1182 family 839 3528
THC0290_N_0363 repeated_region 609996:610101 - A1765 B546 C143 11.88 1.63 new transcription segment 840 3535
THC0290_0503 CDS 610102:610602 - A1765 B546 C143 10.90 1.75 Protein of unknown function precursor 841 3544
THC0290_0504 CDS 611442:612659 + A1765 B546 C143 8.68 1.26 Probable transposase 843 3543
THC0290_N_0365 5prime 612761:612929 + A1762 B546 C143 11.30 1.56 new transcription segment 844 3416
THC0290_0505 CDS 612930:613817 + A1593 B534 C143 9.01 1.69 Protein of unknown function 845 2867
THC0290_0506 CDS 613962:614243 + A1415 B488 C140 8.70 7.60 Protein of unknown function 847 2590
THC0290_0507 gene 614341:614829 + A1415 B488 C140 7.08 5.93 Truncated protein of unknown function, N-terminal region 848 2591
THC0290_N_0367 repeated_region 614486:614829 - A1768 B546 C143 6.67 4.24 new transcription segment 849 3600
THC0290_0509 gene 616003:617439 + A1253 B419 C125 6.48 1.48 Truncated protein of unknown function, C-terminal region 852 2376
THC0290_0514 CDS 629601:630056 + A364 B138 C39 7.43 -1.21 Protein of unknown function 858 466
THC0290_0515 CDS 630235:632664 + A363 B138 C39 8.54 -1.51 Protein of unknown function 860 464
THC0290_N_0372 repeated_region 633986:634186 - A1765 B546 C143 10.18 4.82 new transcription segment 863 3515
THC0290_0517 CDS 634225:634386 - A1765 B546 C143 10.76 5.83 Hypothetical protein 864 3514
THC0290_N_0373 intra 634387:634452 - A1765 B546 C143 13.26 5.28 new transcription segment 865 3513
THC0290_0518 CDS 634453:634626 - A1765 B546 C143 12.57 5.28 Conserved protein of unknown function 866 3512
THC0290_N_0374 intra 634627:634806 - A1765 B546 C143 11.65 6.17 new transcription segment 867 3511
THC0290_0519 CDS 634807:635154 - A1765 B546 C143 12.02 2.85 Conserved protein of unknown function 869 3504
THC0290_0520 CDS 635151:635951 - A1765 B546 C143 12.03 3.61 Probable transcriptional regulator 870 3505
THC0290_N_0377 repeated_region 641242:642097 - A1252 B419 C125 10.05 1.73 new transcription segment 877 2368
THC0290_0526 CDS 642217:643776 + A1765 B546 C143 9.23 2.54 Transposase IS1182 family 878 3529
THC0290_N_0378 repeated_region 645071:645304 + A1686 B545 C143 8.50 1.60 new transcription segment 880 3092
THC0290_N_0387 5prime 655005:655084 - A1765 B546 C143 13.44 1.54 new transcription segment 899 3548
THC0290_N_0388 repeated_region 655785:656570 - A1252 B419 C125 9.68 1.56 new transcription segment 901 2367
THC0290_0539 CDS 656571:656978 - A1675 B543 C143 11.83 1.16 Hypothetical protein 902 3078
THC0290_0540 CDS 656981:657529 - A1760 B546 C143 12.98 2.03 Hypothetical protein 903 3377
THC0290_N_0390 Rfp30 indep 658610:658815 + A1762 B546 C143 12.14 3.86 new transcription segment 906 3412
THC0290_0543 CDS 660017:661417 - A1252 B419 C125 8.18 2.62 Hypothetical protein 910 2373
THC0290_N_0393 repeated_region 661643:662054 - A1766 B546 C143 12.25 1.05 new transcription segment 911 3563
THC0290_N_0394 repeated_region 661670:662043 + A1749 B546 C143 8.51 2.69 new transcription segment 912 3323
THC0290_0546 CDS 664709:665848 - A1253 B419 C125 5.19 1.20 Restriction endonuclease 915 2377
THC0290_0547 gene 665845:666240 - A1731 B546 C143 6.60 1.90 Truncated cytosine-specific modification methyltransferase, C-terminal region 916 3200
THC0290_N_0395 repeated_region 666241:666640 - A1768 B546 C143 8.58 1.31 new transcription segment 917 3576
THC0290_0549 gene 667418:668239 - A1768 B546 C143 11.42 1.49 Truncated cytosine-specific modification methyltransferase, N-terminal region 920 3579
THC0290_N_0396 intra 668261:668748 - A1765 B546 C143 8.63 2.14 new transcription segment 921 3545
THC0290_0550 CDS 668749:669369 - A1765 B546 C143 10.27 1.08 Protein of unknown function 922 3546
THC0290_N_0397 repeated_region 669370:670142 - A1765 B546 C143 8.93 1.60 new transcription segment 923 3523
THC0290_N_0398 5prime 673140:674020 - A1765 B546 C143 10.48 1.35 new transcription segment 925 3547
THC0290_0556 CDS 678342:679628 - A1356 B468 C136 9.33 1.65 Probable type II modification methyltransferase Sau3AI 932 2515
THC0290_0557 CDS 679618:679926 - A1356 B468 C136 9.93 2.25 Putative DNA binding protein 933 2516
THC0290_0561 CDS 682255:683376 - A1765 B546 C143 9.09 1.20 Hypothetical protein 940 3471
THC0290_N_0404 repeated_region 683377:684734 - A1252 B419 C125 9.88 1.40 new transcription segment 941 2369
THC0290_N_0410 repeated_region 693406:693624 - A842 B255 C69 9.72 -1.79 new transcription segment 954 1760
THC0290_0569 CDS 693625:694329 - A842 B255 C69 9.95 -2.41 Protein of unknown function 955 1759
THC0290_0570 CDS 694331:695638 - A1206 B415 C124 10.74 -1.34 Protein of unknown function 956 2262
THC0290_N_0412 repeated_region 696397:696658 - A1768 B546 C143 10.06 1.52 new transcription segment 959 3592
THC0290_N_0415 repeated_region 698501:698961 - A1765 B546 C143 11.88 1.59 new transcription segment 964 3454
THC0290_0574 CDS 698962:700197 - A1191 B409 C123 10.49 1.24 Major facilitator superfamily (MFS) permease 965 2231
THC0290_N_0416 intra 700198:700330 - A1697 B546 C143 11.02 1.98 new transcription segment 966 3109
THC0290_0577 CDS 702287:703369 - A600 B183 C44 11.28 -1.57 Protein of unknown function 971 1084
THC0290_0581 CDS 707782:708492 + A1765 B546 C143 10.95 2.25 Protein of unknown function 979 3501
THC0290_N_0424 3prime 708493:708688 + A1645 B540 C143 9.13 2.42 new transcription segment 982 2997
THC0290_N_0425 3prime-PT 708689:709190 + A1645 B540 C143 8.41 2.64 new transcription segment 983 2998
THC0290_tRNA_0012 tRNA 710904:710976 + A1769 B546 C143 13.48 2.81 transfer RNA-Gly 987 3777
THC0290_0585 CDS 711836:712555 + A1348 B467 C136 8.42 2.66 Protein of unknown function precursor 989 2501
THC0290_0586 CDS 712569:713072 + A1347 B467 C136 8.37 1.12 Protein of unknown function 990 2498
THC0290_0587 CDS 713131:715374 + A1446 B502 C142 11.60 1.21 Probable M1 family aminopeptidase precursor 991 2632
THC0290_0593 sprA CDS 722225:729463 + A663 B187 C46 10.07 -1.02 Putative adhesin precursor SprA 1000 1437
THC0290_N_0433 intra 729464:729774 + A664 B187 C46 8.91 -1.66 new transcription segment 1001 1438
THC0290_0594 CDS 729775:729990 + A599 B183 C44 9.13 -1.97 Conserved protein of unknown function 1002 1021
THC0290_N_0434 3prime 729991:730208 + A601 B183 C44 10.87 -2.10 new transcription segment 1003 1129
THC0290_N_0435 intra 730209:730951 + A318 B119 C33 9.87 -1.56 new transcription segment 1004 404
THC0290_N_0436 intra 731354:731426 + A600 B183 C44 12.85 -1.35 new transcription segment 1006 1047
THC0290_0596 fjo27 CDS 731427:731732 + A600 B183 C44 13.41 -1.10 Conserved membrane protein of unknown function 1007 1046
THC0290_N_0438 repeated_region 734673:735247 + A1842 B563 C145 9.03 3.53 new transcription segment 1011 3938
THC0290_0600 CDS 736346:737788 - A1412 B488 C140 12.12 2.69 Probable outer membrane efflux protein precursor 1013 2587
THC0290_0601 CDS 737937:739331 + A1699 B546 C143 9.29 1.20 Probable lipoprotein precursor 1014 3114
THC0290_N_0441 3prime 739332:739567 + A1420 B491 C140 9.37 1.85 new transcription segment 1017 2602
THC0290_N_0444 3prime 745438:745510 - A1762 B546 C143 15.50 1.92 new transcription segment 1028 3393
THC0290_0611 CDS 745511:745864 - A1762 B546 C143 14.12 2.27 Protein of unknown function 1029 3392
THC0290_0615 CDS 750566:751084 + A1407 B485 C140 10.90 1.09 Carbonic anhydrase/acetyltransferase family protein 1036 2581
THC0290_N_0447 3prime 751085:752281 + A1248 B419 C125 8.88 1.89 new transcription segment 1037 2361
THC0290_0621 CDS 757252:757935 - A1353 B467 C136 10.60 1.42 Protein of unknown function precursor, putative outer membrane protein 1045 2512
THC0290_N_0450 Rfp31 indep 757950:758024 - A1751 B546 C143 10.02 2.83 new transcription segment 1046 3333
THC0290_N_0453 3prime 760731:761017 + A1765 B546 C143 9.45 1.42 new transcription segment 1052 3472
THC0290_0629 tig CDS 763697:765022 + A599 B183 C44 12.73 -1.48 Trigger factor (TF) 1060 1002
THC0290_N_0459 intra 765967:766041 + A457 B168 C44 10.49 -1.21 new transcription segment 1064 594
THC0290_0631 clpX CDS 766042:767274 + A601 B183 C44 12.29 -1.40 S14 family, ATP-dependent Clp protease ATP-binding subunit 1065 1152
THC0290_N_0460 Rfp32 indep 767146:767422 - A1768 B546 C143 7.84 2.98 new transcription segment 1066 3682
THC0290_0632 CDS 767506:767874 + A1745 B546 C143 11.77 1.49 Putative Sec-independent protein translocase (twin-arginine translocation protein) 1068 3239
THC0290_N_0462 3prime 768085:768500 - A1646 B540 C143 7.33 1.32 new transcription segment 1070 3003
THC0290_N_0465 intra 770297:771152 + A1715 B546 C143 8.48 4.27 new transcription segment 1075 3159
THC0290_0636 CDS 770321:771202 - A1765 B546 C143 11.80 4.99 Probable lipoprotein precursor 1076 3493
THC0290_0638 CDS 772469:773029 + A1710 B546 C143 9.01 2.58 RNA polymerase ECF-type sigma factor 1078 3144
THC0290_0639 CDS 773016:773693 + A1710 B546 C143 9.07 2.69 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1079 3145
THC0290_0640 CDS 773726:774790 + A1783 B548 C143 9.55 1.16 Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor 1080 3832
THC0290_0642 CDS 776332:777606 + A1767 B546 C143 8.45 3.04 Protein of unknown function precursor 1082 3568
THC0290_N_0467 3prime 779421:779788 - A1768 B546 C143 9.14 3.90 new transcription segment 1085 3729
THC0290_N_0468 3prime 779749:779897 + A760 B225 C62 8.36 1.29 new transcription segment 1086 1634
THC0290_0644 CDS 779789:780418 - A1768 B546 C143 11.56 4.48 Two-component system response regulatory protein, LuxR family 1087 3728
THC0290_N_0470 5prime 781374:781453 + A1767 B546 C143 10.00 2.05 new transcription segment 1091 3571
THC0290_N_0472 3prime 782817:782865 + A1354 B468 C136 5.90 1.08 new transcription segment 1095 2513
THC0290_0650 mraZ CDS 784611:785084 + A1711 B546 C143 11.71 1.72 Protein MraZ 1099 3149
THC0290_0651 mraW CDS 785092:785967 + A1711 B546 C143 11.46 1.56 S-adenosyl-methyltransferase MraW 1100 3147
THC0290_0652 CDS 785967:786308 + A1192 B409 C123 10.84 1.63 Probable transmembrane protein of unknown function 1101 2232
THC0290_0653 ftsI CDS 786299:788302 + A1192 B409 C123 10.88 1.29 Peptidoglycan glycosyltransferase FtsI 1102 2233
THC0290_N_0484 3prime 802212:803155 + A1248 B419 C125 7.55 1.72 new transcription segment 1125 2359
THC0290_N_0485 3prime 803148:803240 - A1242 B419 C125 9.11 2.05 new transcription segment 1127 2320
THC0290_N_0486 Rfp35 indep 803241:803318 - A1641 B540 C143 12.38 3.93 new transcription segment 1128 2980
THC0290_0666 rpoD CDS 803319:804182 - A1641 B540 C143 13.55 2.64 RNA polymerase sigma-70 factor RpoD 1129 2979
THC0290_N_0487 3prime 804893:804980 - A942 B298 C82 5.81 2.07 new transcription segment 1131 1881
THC0290_0670 CDS 807710:809137 - A1762 B546 C143 10.27 1.04 Probable nucleoside-diphosphate-sugar epimerase 1135 3400
THC0290_0671 phrB3 CDS 809155:810447 - A1742 B546 C143 8.49 1.78 Deoxyribodipyrimidine photolyase PhrB3 1136 3225
THC0290_0672 CDS 810444:812006 - A1742 B546 C143 8.27 1.62 Protein of unknown function related to deoxyribodipyrimidine photolyase 1137 3226
THC0290_N_0492 intra 812007:812083 - A1747 B546 C143 9.70 2.93 new transcription segment 1138 3270
THC0290_0673 phrB2 CDS 812084:813592 - A1763 B546 C143 9.30 2.78 Deoxyribodipyrimidine photolyase PhrB2 1139 3439
THC0290_0674 CDS 813604:814233 - A1763 B546 C143 9.95 2.83 Protein of unknown function 1140 3440
THC0290_0675 CDS 814274:814693 - A1763 B546 C143 10.26 3.38 Protein of unknown function 1141 3443
THC0290_0676 CDS 814714:815004 - A1763 B546 C143 10.57 3.25 Protein of unknown function 1142 3444
THC0290_0678 CDS 815673:816212 + A1694 B546 C143 8.28 1.35 Probable transmembrane protein of unknown function 1144 3104
THC0290_0680 CDS 816720:817085 + A1768 B546 C143 10.28 2.56 Protein of unknown function 1146 3721
THC0290_N_0495 intra 817086:817137 + A1674 B543 C143 10.18 4.76 new transcription segment 1147 3072
THC0290_0681 CDS 817138:819144 + A1674 B543 C143 12.11 4.99 Probable TonB-dependent outer membrane receptor precursor 1148 3071
THC0290_0682 CDS 819184:819525 + A1674 B543 C143 12.77 4.41 Protein of unknown function 1149 3069
THC0290_0683 CDS 819616:819906 + A1674 B543 C143 13.62 2.13 Hypothetical protein 1150 3070
THC0290_N_0497 intra 819907:819970 + A1674 B543 C143 10.87 4.78 new transcription segment 1151 3075
THC0290_0684 sulP CDS 819971:821572 + A1674 B543 C143 12.88 4.93 Probable sulfate permease 1152 3076
THC0290_0685 cynT CDS 821595:822230 + A1674 B543 C143 13.43 4.08 Carbonic anhydrase 1153 3077
THC0290_N_0498 3prime 822231:822315 + A1674 B543 C143 9.68 3.11 new transcription segment 1154 3073
THC0290_0686 CDS 822316:823008 + A1674 B543 C143 11.06 1.67 Transmembrane protein of unknown function, DedA family 1155 3074
THC0290_0688 CDS 823730:824341 - A1449 B502 C142 11.14 1.60 Probable hydrolase (HAD superfamily) 1157 2639
THC0290_N_0500 3prime 826538:826787 - A1169 B401 C121 8.78 2.76 new transcription segment 1161 2204
THC0290_0692 CDS 826788:828029 - A1747 B546 C143 9.92 1.97 Probable ABC-type transport system, permease component 1162 3294
THC0290_N_0510 Rfp36 indep 840044:840245 - A1244 B419 C125 8.96 1.60 new transcription segment 1183 2343
THC0290_0703 CDS 840392:840925 + A540 B180 C44 9.77 -1.03 Protein of unknown function 1184 751
THC0290_0707 CDS 844456:845016 + A1762 B546 C143 13.40 2.31 Putative transcriptional regulator 1190 3410
THC0290_N_0516 3prime 844739:845012 - A1684 B545 C143 8.55 4.43 new transcription segment 1191 3087
THC0290_N_0517 3prime 845017:845453 + A1643 B540 C143 8.85 3.38 new transcription segment 1193 2986
THC0290_N_0519 3prime 846486:846777 - A595 B183 C44 11.27 -2.57 new transcription segment 1196 956
THC0290_0710 ribH CDS 846778:847347 - A600 B183 C44 11.47 -1.47 Riboflavin synthase, beta subunit 1198 1103
THC0290_N_0521 intra 847348:847417 - A454 B168 C44 9.85 -1.91 new transcription segment 1199 589
THC0290_0711 CDS 847418:848209 - A600 B183 C44 12.49 -1.05 Protein of unknown function 1200 1104
THC0290_0715 remC CDS 850979:852040 + A617 B183 C44 10.77 -1.20 RemC, Candidate alpha-glycosyltransferase, Glycosyltransferase family 4 1204 1316
THC0290_0716 asnB CDS 852044:853891 + A617 B183 C44 10.30 -1.01 Asparagine synthetase [glutamine-hydrolyzing] 1205 1315
THC0290_0718 CDS 855109:855891 + A557 B183 C44 8.84 -1.18 Probable ABC-type iron(III)-transport system, ATPase component 1209 813
THC0290_N_0524 3prime 855197:855910 - A1376 B472 C137 7.64 1.28 new transcription segment 1210 2544
THC0290_0724 irk CDS 859337:860293 - A1604 B535 C143 8.80 1.23 Inward rectifier potassium channel Irk 1217 2888
THC0290_0728 groL CDS 864839:866467 - A840 B254 C69 13.08 -1.39 60 kDa chaperonin GroEL 1225 1749
THC0290_N_0530 intra 866468:866905 - A840 B254 C69 12.98 -2.10 new transcription segment 1226 1751
THC0290_0729 groS CDS 866906:867181 - A840 B254 C69 12.65 -1.91 10 kDa chaperonin GroES 1227 1750
THC0290_N_0531 3prime 867274:867320 - A391 B149 C42 8.67 1.16 new transcription segment 1228 501
THC0290_N_0536 3prime 872624:872743 - A1802 B553 C144 7.18 1.63 new transcription segment 1238 3889
THC0290_0735 remH CDS 872744:873166 - A256 B91 C27 12.84 -1.40 Gliding motility protein RemH precursor 1239 334
THC0290_0736 CDS 873196:873774 - A256 B91 C27 12.42 -1.03 Protein of unknown function precursor 1240 335
THC0290_N_0542 3prime 883959:884947 - A1246 B419 C125 8.09 1.79 new transcription segment 1252 2352
THC0290_0745 CDS 884948:885376 - A1768 B546 C143 11.46 1.56 Protein of unknown function 1254 3679
THC0290_N_0548 3prime 890506:891130 + A1218 B416 C125 7.54 1.31 new transcription segment 1264 2284
THC0290_0752 engA CDS 894154:895464 + A971 B307 C84 12.23 1.16 GTP-binding protein EngA 1275 1920
THC0290_0762 CDS 908244:908816 - A595 B183 C44 13.25 -1.32 Protein of unknown function 1294 955
THC0290_N_0563 3prime 910894:911072 + A1685 B545 C143 9.35 1.64 new transcription segment 1297 3089
THC0290_N_0564 Rfp39 indep 913998:914265 + A1768 B546 C143 7.23 2.07 new transcription segment 1301 3685
THC0290_0770 CDS 916301:916633 - A1409 B486 C140 10.87 1.16 Probable transcriptional regulator, MerR family 1308 2583
THC0290_0771 CDS 916633:917610 - A1765 B546 C143 10.80 1.44 Transmembrane peptidase, M23B family 1309 3549
THC0290_0775 CDS 926006:926245 + A1768 B546 C143 10.84 1.67 Hypothetical protein 1317 3661
THC0290_0777 CDS 926970:927692 + A1244 B419 C125 11.07 2.11 Protein of unknown function precursor 1320 2345
THC0290_N_0573 Rfp40 indep 927787:927860 + A1768 B546 C143 8.64 5.03 new transcription segment 1321 3602
THC0290_0779 CDS 928488:929126 + A1765 B546 C143 9.23 1.92 Probable pyrophosphohydrolase 1324 3550
THC0290_N_0575 3prime 929531:929992 - A1226 B417 C125 7.97 2.33 new transcription segment 1326 2297
THC0290_0781 CDS 929993:930601 - A1232 B419 C125 9.16 2.33 Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor 1327 2305
THC0290_0782 CDS 930615:931109 - A1696 B546 C143 10.22 3.01 RNA polymerase ECF-type sigma factor 1328 3106
THC0290_0784 CDS 932625:933680 - A1768 B546 C143 8.43 1.14 Probable transmembrane protein of unknown function 1331 3664
THC0290_N_0577 3prime 935730:935797 - A1650 B542 C143 8.32 1.63 new transcription segment 1334 3011
THC0290_0788 CDS 938186:938767 + A1795 B549 C143 11.63 2.58 Protein of unknown function precursor 1337 3853
THC0290_N_0578 intra 938768:938895 + A1765 B546 C143 8.63 2.38 new transcription segment 1338 3482
THC0290_0789 CDS 938927:940153 + A578 B183 C44 11.67 -1.25 Glu/Leu/Phe/Val dehydrogenase family protein 1339 865
THC0290_N_0579 5prime 940174:940237 + A578 B183 C44 12.24 -1.63 new transcription segment 1340 867
THC0290_0790 CDS 940238:940999 + A578 B183 C44 10.91 -1.89 Hypothetical protein 1341 866
THC0290_N_0580 intra 941000:941283 + A667 B187 C46 11.32 -1.48 new transcription segment 1342 1441
THC0290_0793 CDS 943571:944119 - A1088 B365 C107 10.15 -3.20 Probable transmembrane protein of unknown function 1347 2094
THC0290_0794 fhuA CDS 944125:946380 - A1088 B365 C107 10.97 -3.48 Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA 1348 2095
THC0290_0796 CDS 948326:950458 + A639 B183 C44 11.89 -1.37 Probable outer membrane protein precursor, OmpA family 1352 1389
THC0290_N_0586 3prime 952367:952448 - A320 B120 C33 8.88 -1.15 new transcription segment 1356 407
THC0290_0798 CDS 952449:953249 - A529 B180 C44 7.63 -1.10 Hypothetical protein 1357 717
THC0290_0800 CDS 954369:955730 - A233 B83 C25 9.81 -1.05 Probable DNA polymerase III subunit 1361 306
THC0290_N_0589 intra 955731:955842 - A650 B183 C44 8.68 -1.47 new transcription segment 1363 1420
THC0290_0802 CDS 956244:956903 - A601 B183 C44 9.54 -1.10 Protein of unknown function 1365 1147
THC0290_N_0590 intra 956904:956987 - A368 B140 C39 8.05 -1.52 new transcription segment 1366 470
THC0290_N_0592 3prime 962079:962138 + A1190 B409 C123 8.51 2.56 new transcription segment 1373 2230
THC0290_N_0593 3prime 965318:965499 - A1747 B546 C143 8.68 2.33 new transcription segment 1376 3273
THC0290_0812 fur CDS 967831:968283 + A1764 B546 C143 11.64 1.03 Ferric iron uptake transcription regulator, Fur 1382 3449
THC0290_0815 oxaA CDS 970617:972518 - A800 B244 C67 10.71 -1.74 Inner membrane protein OxaA 1386 1690
THC0290_N_0599 intra 972519:972611 - A800 B244 C67 10.34 -1.06 new transcription segment 1387 1689
THC0290_0817 CDS 974932:975162 - A674 B189 C46 10.87 -1.65 Protein of unknown function 1389 1454
THC0290_N_0600 intra 975163:975241 - A674 B189 C46 9.23 -1.98 new transcription segment 1390 1453
THC0290_0818 osmC CDS 975242:975646 - A674 B189 C46 10.49 -1.02 Putative stress-induced protein OsmC 1391 1455
THC0290_N_0601 Rfp42 indep 976566:976680 + A1248 B419 C125 7.13 2.31 new transcription segment 1393 2355
THC0290_N_0602 intra 977563:977781 - A1244 B419 C125 9.81 1.14 new transcription segment 1394 2344
THC0290_N_0603 3prime 979489:979622 - A979 B309 C84 7.30 1.08 new transcription segment 1396 1931
THC0290_0824 ppiA CDS 982856:983950 + A601 B183 C44 12.43 -1.29 Probable peptidyl-prolyl cis-trans isomerase precursor PpiA 1400 1177
THC0290_0825 ppiB CDS 983971:985056 + A601 B183 C44 12.24 -1.53 Probable peptidyl-prolyl cis-trans isomerase precursor PpiB 1401 1178
THC0290_0828 CDS 988051:988332 - A1762 B546 C143 13.80 2.42 Protein of unknown function 1405 3391
THC0290_0829 CDS 988595:989146 + A1762 B546 C143 11.68 1.57 Probable ribosomal-protein-amino-adic N-acetyltransferase 1406 3411
THC0290_0832 dcp2 CDS 990238:992370 - A1796 B549 C143 10.05 1.73 Peptidyl-dipeptidase precursor Dcp2 1410 3876
THC0290_N_0617 3prime 1004055:1004461 + A1178 B404 C122 8.47 1.90 new transcription segment 1429 2215
THC0290_0845 CDS 1006516:1006935 + A1765 B546 C143 10.36 1.07 Protein of unknown function 1432 3502
THC0290_0849 CDS 1009303:1009518 - A501 B175 C44 6.55 -1.67 Hypothetical transmembrane protein 1437 669
THC0290_N_0619 Rfp43 indep 1009763:1009899 + A1839 B563 C145 5.70 2.10 new transcription segment 1439 3933
THC0290_0853 yfkH CDS 1012228:1013175 + A601 B183 C44 9.81 -1.20 Protein of unknown function YfkH 1442 1168
THC0290_N_0620 intra 1013601:1014074 + A625 B183 C44 10.55 -1.59 new transcription segment 1444 1343
THC0290_0855 priA CDS 1014075:1016525 + A611 B183 C44 10.09 -1.40 Primosomal protein N' 1445 1286
THC0290_N_0621 3prime 1016422:1016591 - A1765 B546 C143 12.96 1.48 new transcription segment 1446 3553
THC0290_0856 CDS 1016592:1017284 - A1762 B546 C143 12.54 2.02 Two-component system response regulatory protein, LytTR family 1448 3418
THC0290_0857 rpsF CDS 1017453:1017794 + A542 B180 C44 13.59 -1.30 30S ribosomal protein S6 1449 760
THC0290_0858 rpsR CDS 1017800:1018096 + A542 B180 C44 14.55 -1.64 30S ribosomal protein S18 1450 761
THC0290_N_0623 intra 1018097:1018161 + A542 B180 C44 16.30 -1.28 new transcription segment 1451 759
THC0290_N_0625 intra 1018645:1018746 + A810 B244 C67 6.21 -3.47 new transcription segment 1453 1709
THC0290_0860 CDS 1018747:1019220 + A586 B183 C44 8.33 -1.41 Protein of unknown function 1454 912
THC0290_N_0629 intra 1024365:1024417 - A451 B168 C44 9.50 -1.46 new transcription segment 1463 584
THC0290_0867 recN CDS 1024418:1026070 - A645 B183 C44 10.84 -1.33 DNA repair protein recN 1464 1403
THC0290_0869 coaBC CDS 1026960:1028168 - A645 B183 C44 10.63 -1.50 Bifunctional protein CoaBC : Phosphopantothenoylcysteine decarboxylase and Phosphopantothenate--cysteine ligase 1466 1402
THC0290_0871 bamD CDS 1028500:1029294 - A641 B183 C44 11.82 -1.04 Outer membrane assembly lipoprotein precursor BamD 1468 1395
THC0290_0873 CDS 1030281:1030799 - A1751 B546 C143 11.80 1.45 Protein of unknown function 1471 3337
THC0290_0876 gene 1033238:1033369 - A1768 B546 C143 8.53 1.96 protein of unknown function (fragment) 1476 3691
THC0290_0877 gene 1033435:1033563 - A1747 B546 C143 8.29 1.64 Cytosine-specific methyltransferase (fragment) 1477 3272
THC0290_0878 CDS 1034261:1036504 + A1796 B549 C143 9.97 5.57 Protein of unknown function precursor, putative adhesin 1478 3881
THC0290_N_0633 intra 1038177:1038243 + A1765 B546 C143 8.65 1.56 new transcription segment 1481 3561
THC0290_0881 rprX CDS 1038245:1039828 + A1765 B546 C143 10.81 1.92 Two-component system sensor histidine kinase RprX 1482 3521
THC0290_0882 rprY CDS 1039832:1040533 + A1765 B546 C143 12.89 1.74 Two-component system response regulatory protein RprY 1483 3516
THC0290_0883 ytxJ CDS 1040596:1040982 + A1644 B540 C143 9.49 2.21 Protein of unknown function YtxJ 1485 2993
THC0290_N_0635 3prime 1040983:1041081 + A1644 B540 C143 8.90 2.42 new transcription segment 1486 2994
THC0290_0884 CDS 1041028:1041660 - A1749 B546 C143 9.29 1.05 Hypothetical lipoprotein precursor 1487 3318
THC0290_0885 CDS 1041714:1042898 - A1243 B419 C125 10.61 1.10 Probable lipoprotein precursor 1489 2321
THC0290_N_0638 intra 1048143:1048274 + A380 B145 C41 9.98 -1.10 new transcription segment 1496 488
THC0290_0891 CDS 1048948:1050882 + A967 B307 C84 11.29 1.07 Probable ATP-dependent RNA helicase, DEAD/DEAH box family 1499 1911
THC0290_N_0640 3prime 1050883:1050942 + A969 B307 C84 7.12 2.68 new transcription segment 1500 1914
THC0290_0893 CDS 1052483:1053235 + A1753 B546 C143 10.86 3.08 Protein of unknown function precursor 1503 3355
THC0290_0894 (yfcA) CDS 1053252:1054037 + A1753 B546 C143 11.06 2.01 Probable transmembrane protein of unknown function 1504 3347
THC0290_N_0642 intra 1054038:1054100 + A1753 B546 C143 9.95 1.94 new transcription segment 1505 3348
THC0290_0910 CDS 1070654:1073071 + A623 B183 C44 10.36 -1.01 Protein of unknown function 1529 1336
THC0290_0911 crcB CDS 1073072:1073446 + A629 B183 C44 10.47 -1.28 Protein of unknown function CrcB 1530 1353
THC0290_0912 CDS 1073443:1074720 + A601 B183 C44 9.24 -1.82 Glycosyl transferase, group 1 family protein 1531 1137
THC0290_0920 manA CDS 1080590:1081558 + A605 B183 C44 11.09 -1.40 Mannose-6-phosphate isomerase 1545 1234
THC0290_tRNA_0017 tRNA 1081988:1082061 + A1769 B546 C143 13.51 3.74 transfer RNA-Thr 1548 3766
THC0290_0923 CDS 1082679:1084841 + A207 B76 C24 8.06 -2.64 Probable TonB-dependent outer membrane receptor precursor 1550 265
THC0290_N_0656 intra 1084910:1084987 + A207 B76 C24 6.94 -4.37 new transcription segment 1551 264
THC0290_0924 CDS 1084988:1086520 + A207 B76 C24 7.89 -2.87 Probable transmembrane protein of unknown function 1552 266
THC0290_N_0657 intra 1087045:1087158 + A1085 B365 C107 11.45 -1.10 new transcription segment 1554 2076
THC0290_0926 ftnA CDS 1087175:1087702 + A1414 B488 C140 14.66 2.09 Ferritin 1555 2589
THC0290_N_0659 3prime 1087703:1087790 + A1747 B546 C143 8.06 2.80 new transcription segment 1557 3275
THC0290_0931 CDS 1092634:1095516 + A1796 B549 C143 12.58 5.41 Collagenase precursor 1565 3878
THC0290_N_0663 3prime 1095517:1095601 + A1795 B549 C143 10.27 7.09 new transcription segment 1566 3854
THC0290_0938 aroE CDS 1105425:1106162 + A1272 B425 C125 10.33 -1.31 Shikimate dehydrogenase 1578 2409
THC0290_0942 clpB CDS 1110287:1112887 + A1213 B415 C124 11.35 -1.56 ATPase with chaperone activity ATP-binding subunit 1585 2277
THC0290_0944 CDS 1115625:1117259 + A1762 B546 C143 11.44 1.02 Probable S8 subtilisin family serine endopeptidase precursor 1591 3401
THC0290_N_0675 Rfp45 indep 1119827:1119911 - A1765 B546 C143 9.48 3.98 new transcription segment 1595 3510
THC0290_0947 CDS 1120307:1120960 - A1768 B546 C143 9.55 1.19 Protein of unknown function precursor 1597 3698
THC0290_N_0677 5prime 1120961:1121203 - A1768 B546 C143 10.80 2.19 new transcription segment 1598 3658
THC0290_N_0680 intra 1123924:1124271 - A325 B121 C33 7.05 -1.17 new transcription segment 1605 412
THC0290_N_0682 intra 1125260:1125357 - A296 B110 C31 5.16 -1.63 new transcription segment 1609 381
THC0290_0954 CDS 1125358:1125897 - A542 B180 C44 13.45 -1.43 Protein of unknown function 1610 763
THC0290_0960 CDS 1130977:1132209 - A1779 B546 C143 10.02 1.17 Major facilitator superfamily (MFS) permease 1619 3815
THC0290_N_0687 3prime 1134182:1134362 - A197 B70 C21 8.41 1.54 new transcription segment 1624 244
THC0290_N_0688 3prime 1134356:1134819 + A1820 B557 C145 7.28 1.66 new transcription segment 1625 3913
THC0290_0965 CDS 1135455:1135643 - A1769 B546 C143 10.29 1.31 Hypothetical protein 1627 3791
THC0290_N_0689 3prime-PT 1135956:1136305 - A572 B183 C44 7.88 -1.87 new transcription segment 1629 847
THC0290_0969 CDS 1138406:1138603 + A1751 B546 C143 14.04 2.25 Protein of unknown function 1632 3335
THC0290_N_0692 3prime-PT 1138630:1139078 + A1766 B546 C143 8.43 4.02 new transcription segment 1633 3562
THC0290_N_0694 3prime 1141686:1141770 - A99 B44 C16 6.64 -2.18 new transcription segment 1638 120
THC0290_0975 CDS 1144105:1145307 + A3 B3 C2 9.92 -1.22 Cys/Met metabolism PLP-dependent enzyme 1644 3
THC0290_0977 CDS 1147602:1149359 - A1795 B549 C143 7.66 5.48 Esterase/lipase/thioesterase family protein precursor 1647 3864
THC0290_0978 katG CDS 1149873:1152080 + A1791 B549 C143 11.86 4.73 Bi-functional catalase-peroxidase 1649 3846
THC0290_0979 CDS 1152256:1152894 + A1864 B574 C149 14.26 1.82 Probable peroxiredoxin 1650 3964
THC0290_N_0699 intra 1152895:1152978 + A1864 B574 C149 9.11 1.12 new transcription segment 1651 3965
THC0290_0981 CDS 1153330:1153587 + A1864 B574 C149 12.61 1.54 Hypothetical protein 1653 3963
THC0290_N_0701 3prime-PT 1153613:1154322 + A1661 B542 C143 7.30 2.62 new transcription segment 1654 3034
THC0290_0986 CDS 1159706:1160173 - A884 B274 C75 11.10 1.73 Probable transcriptional regulator, MarR-family 1661 1810
THC0290_0990 mrsB1 CDS 1164703:1165185 - A1350 B467 C136 11.32 1.06 Probable protein-methionine-S-oxide reductase MrsB1 1666 2507
THC0290_0991 CDS 1165196:1165933 - A1350 B467 C136 11.17 1.26 Protein of unknown function 1667 2508
THC0290_N_0709 5prime 1168710:1168824 + A838 B254 C69 9.51 -2.33 new transcription segment 1671 1746
THC0290_0994 lon CDS 1168825:1171275 + A837 B254 C69 10.99 -2.14 S16 family, ATP-dependent endopeptidase La 1672 1744
THC0290_N_0710 intra 1171276:1171449 + A836 B254 C69 7.14 -2.28 new transcription segment 1673 1743
THC0290_0998 CDS 1174719:1175126 - A600 B183 C44 12.48 -1.87 Hypothetical protein 1679 1075
THC0290_0999 CDS 1175136:1176107 - A600 B183 C44 12.45 -1.63 Protein of unknown function 1680 1076
THC0290_1003 rnz CDS 1180295:1181200 + A601 B183 C44 11.56 -1.21 Ribonuclease Z 1688 1141
THC0290_N_0716 intra 1181201:1181289 + A459 B168 C44 10.02 -1.44 new transcription segment 1689 596
THC0290_N_0717 Rfp47 indep 1182025:1182142 + A1683 B545 C143 11.90 4.39 new transcription segment 1691 3086
THC0290_1011 CDS 1191683:1192117 + A1584 B532 C143 13.39 1.00 Protein of unknown function precursor 1704 2856
THC0290_N_0723 intra 1192145:1192355 + A1747 B546 C143 10.40 2.52 new transcription segment 1705 3248
THC0290_N_0725 3prime 1194079:1194140 + A632 B183 C44 5.41 -2.99 new transcription segment 1709 1365
THC0290_1015 CDS 1195821:1196102 + A1628 B539 C143 6.33 2.17 Protein of unknown function 1711 2940
THC0290_1019 kdpC CDS 1200577:1201131 + A1629 B539 C143 7.21 1.18 Potassium-transporting ATPase C subunit 1715 2945
THC0290_1024 CDS 1206629:1207081 - A1768 B546 C143 10.91 1.68 Probable lipoprotein precursor 1723 3628
THC0290_N_0729 3prime 1208128:1208301 + A1369 B470 C136 8.84 1.68 new transcription segment 1727 2536
THC0290_1035 CDS 1212972:1213316 + A1762 B546 C143 14.91 1.66 Protein of unknown function 1736 3394
THC0290_N_0733 3prime 1213317:1213392 + A1762 B546 C143 9.79 3.83 new transcription segment 1737 3413
THC0290_N_0734 3prime 1213392:1213452 - A1768 B546 C143 13.91 2.13 new transcription segment 1738 3723
THC0290_1036 fjo10 CDS 1213453:1213833 - A1768 B546 C143 13.20 2.37 Probable lipoprotein precursor Fjo10. Putative cation transport ATPase 1739 3724
THC0290_1037 fjo11 CDS 1213924:1214790 + A1235 B419 C125 7.91 1.03 Probable transmembrane protein of unknown function Fjo11 1740 2309
THC0290_1042 cafA CDS 1218140:1219684 - A599 B183 C44 11.04 -1.82 Ribonuclease G 1749 1006
THC0290_N_0738 intra 1219685:1219937 - A599 B183 C44 10.29 -2.08 new transcription segment 1750 1007
THC0290_1044 mutY CDS 1220495:1221526 + A332 B123 C34 8.09 -1.06 A/G-specific adenine glycosylase 1753 432
THC0290_1048 CDS 1225034:1227307 - A1156 B395 C120 9.14 1.07 Protein of unknown function precursor, putative adhesin 1758 2190
THC0290_1049 CDS 1227322:1228158 - A123 B51 C18 9.92 1.12 Probable ABC-type transport system, permease component 1760 156
THC0290_1050 CDS 1228194:1229117 - A1386 B477 C139 10.92 1.24 Probable ABC-type transport system, ATPase component 1761 2555
THC0290_N_0743 intra 1229140:1229219 - A411 B155 C43 8.08 -1.32 new transcription segment 1762 526
THC0290_1054 CDS 1231465:1232691 - A1765 B546 C143 9.90 2.38 Protein of unknown function precursor containing a C-terminal secretion signal 1769 3479
THC0290_1057 CDS 1236086:1237453 + A556 B183 C44 11.32 -1.30 Membrane protein containing an internal histidine kinase domain 1773 810
THC0290_1059 CDS 1237798:1238103 + A556 B183 C44 10.75 -1.27 Protein of unknown function 1775 809
THC0290_1063 coxA CDS 1240263:1241282 - A1753 B546 C143 9.82 1.29 Cytochrome c oxidase assembly protein 1780 3343
THC0290_N_0750 intra 1245836:1245885 - A1550 B523 C143 12.58 -1.06 new transcription segment 1786 2796
THC0290_1075 CDS 1253443:1254381 + A601 B183 C44 9.83 -1.55 Glycosyl transferase, group 2 family protein 1796 1172
THC0290_1076 CDS 1254381:1255154 + A601 B183 C44 8.94 -1.65 Probable polysaccharide deacetylase 1797 1155
THC0290_1077 CDS 1255157:1255903 + A580 B183 C44 8.21 -1.41 Glycosyl transferase, group 2 family protein 1798 876
THC0290_1078 CDS 1255885:1257000 - A494 B173 C44 8.99 -1.15 Putative mannosyltransferase 1799 659
THC0290_N_0754 intra 1257001:1257153 - A369 B141 C39 9.81 -1.04 new transcription segment 1801 471
THC0290_N_0757 3prime 1260740:1260926 - A1229 B418 C125 11.58 1.74 new transcription segment 1807 2302
THC0290_1082 dsbD CDS 1260927:1262939 - A119 B49 C18 11.36 1.62 Thiol:disulfide interchange protein DsbD precursor 1808 151
THC0290_1085 CDS 1265923:1266828 + A1243 B419 C125 9.54 1.92 Probable lipoprotein precursor 1812 2322
THC0290_1086 ddpX CDS 1266894:1267535 + A1361 B469 C136 9.01 1.05 D-alanyl-D-alanine dipeptidase 1813 2522
THC0290_1090 CDS 1270459:1271454 - A725 B207 C54 9.65 2.04 Probable M43 cytophagalysin family metalloprotease precursor 1819 1582
THC0290_N_0761 5prime 1274218:1274287 + A1768 B546 C143 10.35 2.89 new transcription segment 1823 3659
THC0290_1099 CDS 1283185:1284720 + A1792 B549 C143 10.40 1.38 Protein of unknown function 1836 3847
THC0290_N_0769 intra 1284721:1285209 + A1794 B549 C143 8.39 1.15 new transcription segment 1838 3850
THC0290_1100 yojE CDS 1285018:1285905 - A572 B183 C44 8.28 -1.44 Probable permease YojE 1839 846
THC0290_N_0773 3prime 1289168:1289525 - A1125 B375 C109 12.45 -1.00 new transcription segment 1845 2157
THC0290_N_0779 3prime 1297987:1298261 - A1644 B540 C143 7.47 1.74 new transcription segment 1857 2989
THC0290_1110 CDS 1298262:1298678 - A1721 B546 C143 10.29 1.33 Probable arsenate reductase (glutaredoxin) 1859 3177
THC0290_1111 CDS 1298680:1299294 - A1721 B546 C143 10.77 1.92 Protein of unknown function 1860 3178
THC0290_1112 CDS 1299295:1299420 - A1721 B546 C143 9.81 2.49 Hypothetical protein 1861 3179
THC0290_1113 CDS 1299423:1299896 - A1721 B546 C143 11.18 3.19 Protein of unknown function 1862 3175
THC0290_N_0781 intra 1299897:1299959 - A1721 B546 C143 12.64 3.66 new transcription segment 1863 3176
THC0290_1114 CDS 1299960:1300283 - A1721 B546 C143 10.82 6.09 Probable transcriptional regulator, ArsR family 1864 3174
THC0290_1116 dgkA CDS 1301176:1301556 + A645 B183 C44 11.84 -1.52 Diacylglycerol kinase 1866 1400
THC0290_N_0782 intra 1301557:1301748 + A458 B168 C44 10.90 -1.80 new transcription segment 1867 595
THC0290_1117 ftsK CDS 1301749:1304211 + A645 B183 C44 10.54 -1.38 DNA translocase FtsK 1868 1401
THC0290_1118 lolA CDS 1304216:1304857 + A417 B158 C44 10.33 -1.17 Outer-membrane lipoprotein carrier protein precursor LolA 1869 533
THC0290_N_0785 3prime 1307664:1307713 + A1766 B546 C143 8.05 1.32 new transcription segment 1874 3564
THC0290_N_0786 3prime 1308797:1309548 - A293 B108 C30 6.84 -1.41 new transcription segment 1876 378
THC0290_1122 CDS 1309549:1311003 - A581 B183 C44 9.00 -1.77 Probable modification methyltransferase 1877 883
THC0290_1123 CDS 1311015:1311827 - A581 B183 C44 8.67 -1.47 Protein of unknown function 1878 882
THC0290_1124 CDS 1311834:1313342 - A578 B183 C44 8.25 -1.86 Protein of unknown function 1879 860
THC0290_1125 CDS 1313339:1315027 - A578 B183 C44 8.28 -1.62 Probable type I restriction-modification system, DNA specificity domain protein 1880 861
THC0290_N_0787 intra 1316615:1316949 - A1715 B546 C143 8.95 1.93 new transcription segment 1883 3157
THC0290_1135 CDS 1327350:1327610 - A1768 B546 C143 6.78 1.06 Hypothetical protein 1893 3711
THC0290_1137 CDS 1329295:1330215 - A1795 B549 C143 7.44 2.61 Probable transcriptional regulator, AraC family 1895 3873
THC0290_1138 CDS 1330262:1330645 - A1795 B549 C143 7.53 2.44 Hypothetical protein 1896 3857
THC0290_1139 gene 1330865:1331572 + A1529 B521 C143 4.86 1.27 Truncated protein, N-terminal region 1897 2767
THC0290_1149 gene 1338209:1338670 + A1744 B546 C143 5.19 1.22 Truncated protein, C-terminal region 1907 3229
THC0290_1166 CDS 1357451:1358482 + A351 B130 C36 4.72 -1.42 Probable glycosidase, PH1107-related protein 1924 451
THC0290_1167 CDS 1358484:1360820 + A930 B291 C80 5.34 -1.41 Glycosyl transferase, group 1 family protein 1925 1866
THC0290_1177 gene 1366017:1366154 + A1747 B546 C143 6.14 1.60 Truncated protein 1936 3305
THC0290_1184 gene 1371353:1371625 + A1324 B457 C133 4.82 -1.49 TspO and MBR like protein (fragment) 1943 2470
THC0290_1193 CDS 1381373:1381627 + A1768 B546 C143 8.91 3.02 Hypothetical protein 1953 3714
THC0290_1195 CDS 1381938:1382327 + A1768 B546 C143 5.63 1.22 Hypothetical protein 1955 3708
THC0290_1200 CDS 1384769:1384954 + A1747 B546 C143 8.10 1.48 CsbD family protein 1960 3271
THC0290_1201 CDS 1384990:1385493 + A1765 B546 C143 8.01 1.06 Hypothetical lipoprotein precursor 1961 3467
THC0290_1203 CDS 1386310:1386462 + A1311 B450 C132 6.86 1.02 Conserved exported protein of unknown function 1963 2453
THC0290_1204 CDS 1386496:1386726 + A1768 B546 C143 9.43 2.08 Hypothetical protein 1964 3689
THC0290_1205 CDS 1386748:1387101 + A1768 B546 C143 7.99 2.14 Hypothetical protein 1965 3690
THC0290_N_0791 Rfp52 indep 1390344:1391243 - A1768 B546 C143 7.47 1.03 new transcription segment 1969 3695
THC0290_N_0794 3prime-PT 1396900:1397099 + A1645 B540 C143 8.03 1.47 new transcription segment 1976 2996
THC0290_miscRNA_0044 Rfp54 misc_RNA 1402818:1403137 + A1768 B546 C143 16.36 1.49 Bacterial Rnase P class A 1982 3726
THC0290_tRNA_0020 tRNA 1406725:1406801 + A762 B226 C62 16.25 1.25 transfer RNA-Ala 1988 1636
THC0290_1216 gene 1410277:1411122 - A1747 B546 C143 5.36 1.36 Truncated transposase ISL3 family, C-terminal region 1991 3301
THC0290_1223 CDS 1418395:1418796 - A1795 B549 C143 9.72 1.20 Protein of unknown function 2000 3874
THC0290_1224 CDS 1418799:1419512 - A1795 B549 C143 11.21 1.14 Protein of unknown function 2002 3875
THC0290_1231 CDS 1425441:1426022 - A1542 B522 C143 8.18 -1.20 Probable transmembrane protein of unknown function 2013 2785
THC0290_1236 CDS 1428816:1429214 - A1793 B549 C143 10.53 1.46 Cytochrome c family protein 2018 3849
THC0290_1237 CDS 1429217:1429477 - A684 B192 C48 7.49 -2.96 Hypothetical transmembrane protein 2019 1484
THC0290_1238 CDS 1429483:1430496 - A684 B192 C48 6.91 -3.19 Cytochrome c oxidase family protein 2020 1485
THC0290_1239 CDS 1430503:1432671 - A688 B193 C48 7.49 -2.25 Cytochrome c oxidase family protein 2021 1494
THC0290_1242 CDS 1434834:1435964 - A707 B201 C52 9.67 -2.60 Probable membrane fusion efflux lipoprotein precursor 2025 1536
THC0290_1243 CDS 1435961:1436539 - A707 B201 C52 9.08 -2.75 Probable transcriptional regulator, TetR family 2026 1537
THC0290_N_0806 Rfp55 indep 1436072:1436459 + A1768 B546 C143 7.29 2.00 new transcription segment 2027 3667
THC0290_1245 CDS 1438036:1438314 - A545 B180 C44 11.09 -1.33 Thiol:disulfide interchange protein, C-terminal region 2032 772
THC0290_N_0811 intra 1438315:1438460 - A545 B180 C44 11.62 -1.86 new transcription segment 2033 774
THC0290_1246 CDS 1438461:1439183 - A545 B180 C44 11.93 -1.24 Thiol:disulfide interchange lipoprotein precursor, N-terminal region 2034 773
THC0290_N_0813 intra 1440159:1440329 + A921 B286 C78 8.76 1.83 new transcription segment 2038 1855
THC0290_N_0814 Rfp56 indep 1444415:1444724 - A1768 B546 C143 7.37 2.44 new transcription segment 2041 3700
THC0290_N_0815 3prime 1446042:1446224 - A1762 B546 C143 11.77 1.04 new transcription segment 2043 3426
THC0290_1252 CDS 1446225:1446704 - A1762 B546 C143 13.43 1.90 Universal stress protein, UspA family 2044 3425
THC0290_N_0816 intra 1446727:1446954 - A1795 B549 C143 9.18 1.31 new transcription segment 2045 3872
THC0290_1253 CDS 1446955:1448118 - A1762 B546 C143 10.89 1.55 Probable two-component system response regulatory protein - glycosyl transferase, group 2 family protein 2046 3395
THC0290_1254 CDS 1448226:1451315 + A1664 B542 C143 7.44 1.34 Probable transmembrane protein 2047 3043
THC0290_1255 CDS 1451315:1452553 + A1874 B578 C149 7.23 1.15 Protein of unknown function precursor 2048 3976
THC0290_1257 CDS 1454090:1455256 - A1795 B549 C143 9.31 2.38 Glycosyl transferase, group 1 family protein 2050 3868
THC0290_1258 CDS 1455281:1456540 - A1795 B549 C143 7.70 2.60 Putative capsular polysaccharide biosynthesis protein 2051 3866
THC0290_N_0818 3prime 1459920:1459991 + A1589 B533 C143 6.29 1.26 new transcription segment 2055 2862
THC0290_N_0821 3prime 1467104:1468011 - A1779 B546 C143 8.87 1.68 new transcription segment 2065 3813
THC0290_1270 CDS 1468900:1469292 + A1615 B535 C143 11.09 1.77 Protein of unknown function 2068 2917
THC0290_N_0822 3prime 1469293:1469476 + A1615 B535 C143 9.83 1.92 new transcription segment 2069 2918
THC0290_1272 hisF CDS 1469906:1470661 - A723 B206 C54 5.09 -1.43 Imidazole glycerol phosphate synthase subunit HisF 2071 1580
THC0290_1273 hisA CDS 1470665:1471390 - A708 B202 C53 5.05 -1.47 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase 2072 1538
THC0290_N_0823 intra 1472127:1472214 - A708 B202 C53 4.58 -1.43 new transcription segment 2075 1539
THC0290_N_0831 3prime 1485875:1486044 + A1642 B540 C143 7.53 1.02 new transcription segment 2094 2982
THC0290_1286 CDS 1485887:1486099 - A1765 B546 C143 9.15 1.31 Hypothetical protein 2095 3476
THC0290_1287 ppx CDS 1486086:1486976 - A1076 B360 C106 10.37 -1.24 Exopolyphosphatase 2096 2048
THC0290_N_0832 intra 1486977:1487036 - A1076 B360 C106 10.58 -1.42 new transcription segment 2097 2047
THC0290_1291 CDS 1490287:1490424 - A1698 B546 C143 6.14 2.07 Conserved protein of unknown function (fragment) 2102 3110
THC0290_1293 CDS 1492056:1492418 - A601 B183 C44 10.57 -2.18 Protein of unknown function 2106 1174
THC0290_1294 CDS 1492421:1493350 - A601 B183 C44 11.46 -2.42 Probable UDP-N-acetylglucosamine acyltransferase 2107 1175
THC0290_1295 efp CDS 1493357:1493920 - A601 B183 C44 11.41 -2.14 Elongation factor P (EF-P) 2108 1173
THC0290_N_0837 intra 1493921:1493987 - A600 B183 C44 10.68 -1.36 new transcription segment 2109 1087
THC0290_1296 lpxA CDS 1493988:1494770 - A600 B183 C44 11.20 -1.45 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2110 1085
THC0290_N_0838 intra 1494771:1494824 - A600 B183 C44 11.28 -1.59 new transcription segment 2111 1082
THC0290_1297 lpxC/fabZ CDS 1494825:1496213 - A600 B183 C44 11.29 -1.34 Bifunctional enzyme : UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase and (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase 2112 1086
THC0290_1298 lpxD CDS 1496216:1497235 - A600 B183 C44 11.07 -1.04 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2113 1109
THC0290_N_0839 5prime 1497236:1497324 - A460 B168 C44 8.39 -1.10 new transcription segment 2114 598
THC0290_N_0840 Rfp57 indep 1497415:1497522 + A1768 B546 C143 8.61 3.84 new transcription segment 2116 3647
THC0290_1303 CDS 1502141:1504564 - A959 B304 C83 7.42 1.35 Probable TonB-dependent outer membrane receptor precursor 2124 1899
THC0290_N_0844 Rfp59 indep 1505987:1506397 - A1768 B546 C143 6.80 1.67 new transcription segment 2126 3680
THC0290_N_0846 intra 1509590:1509687 - A1775 B546 C143 8.60 1.19 new transcription segment 2131 3801
THC0290_1309 gene 1510782:1511459 + A1765 B546 C143 11.37 1.72 Fragment of two-component system sensor histidine kinase (part 1) 2133 3489
THC0290_1311 gene 1512751:1513449 + A1765 B546 C143 8.68 2.06 Fragment of two-component system sensor histidine kinase (part 2) 2135 3491
THC0290_1314 CDS 1514838:1515227 - A1747 B546 C143 9.49 1.09 Probable transmembrane protein of unknown function 2138 3250
THC0290_1315 CDS 1515410:1516276 + A1104 B371 C109 7.15 -1.26 Probable transcriptional regulator, AraC family 2139 2128
THC0290_1316 CDS 1516638:1518572 + A687 B193 C48 10.02 -1.15 Probable myosin-crossreactive antigen 2140 1489
THC0290_1320 CDS 1521863:1523305 - A600 B183 C44 11.14 -1.64 Phosphate transporter family protein 2144 1105
THC0290_1321 CDS 1523330:1523983 - A542 B180 C44 10.67 -1.27 Protein of unknown function 2145 762
THC0290_1324 CDS 1527411:1529042 + A601 B183 C44 10.10 -1.52 Probable M1 family metalloprotease precursor 2148 1179
THC0290_N_0847 intra 1529964:1530048 + A319 B119 C33 9.77 -1.31 new transcription segment 2150 406
THC0290_1327 CDS 1530569:1530829 + A692 B195 C50 10.12 -1.31 Protein of unknown function 2152 1499
THC0290_1331 CDS 1536113:1536958 - A1751 B546 C143 12.26 1.11 Protein of unknown function precursor 2156 3340
THC0290_1332 CDS 1537097:1537567 + A1763 B546 C143 10.89 5.12 Protein of unknown function 2157 3441
THC0290_1333 CDS 1537570:1538268 + A1763 B546 C143 10.52 4.26 Probable short-chain type dehydrogenase 2158 3442
THC0290_1334 phrB1 CDS 1538431:1539717 + A1763 B546 C143 9.25 2.21 Deoxyribodipyrimidine photolyase PhrB1 2160 3436
THC0290_1335 CDS 1539932:1540345 + A1449 B502 C142 11.33 4.45 Probable two-component system response regulatory protein 2161 2640
THC0290_1336 CDS 1540353:1540895 + A1763 B546 C143 10.96 2.94 Protein of unknown function containing an heme NO Binding domain 2162 3430
THC0290_1337 CDS 1540897:1543509 + A1762 B546 C143 9.96 1.34 Two-component system sensor histidine kinase 2163 3388
THC0290_1338 CDS 1543512:1544648 + A1876 B578 C149 10.16 1.02 Protein of unknown function 2164 3979
THC0290_N_0849 3prime 1546143:1546768 - A1665 B542 C143 8.40 2.02 new transcription segment 2168 3046
THC0290_1342 CDS 1546769:1548826 - A1669 B542 C143 9.62 1.36 Protein of unknown function precursor 2170 3057
THC0290_1343 CDS 1549155:1552811 - A1795 B549 C143 9.01 4.08 Protein of unknown function precursor containing PKD domains and a C-terminal secretion signal 2171 3855
THC0290_1344 CDS 1552913:1553296 - A1795 B549 C143 9.35 4.57 Transposase IS1 family 2172 3856
THC0290_1348 bfmBA CDS 1558467:1560443 - A600 B183 C44 11.23 -1.13 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 2180 1107
THC0290_N_0856 intra 1561715:1561857 + A459 B168 C44 9.79 -2.02 new transcription segment 2183 597
THC0290_N_0859 intra 1563843:1563921 + A412 B155 C43 7.86 -2.00 new transcription segment 2188 527
THC0290_1353 CDS 1563922:1564455 + A608 B183 C44 9.34 -1.08 Probable ribosomal-protein-amino-adic N-acetyltransferase 2189 1265
THC0290_1354 CDS 1564460:1564954 + A585 B183 C44 7.85 -1.42 Protein of unknown function 2190 909
THC0290_1358 ung CDS 1568078:1568740 - A1768 B546 C143 9.21 1.22 Uracil-DNA glycosylase 2197 3718
THC0290_N_0865 3prime 1580293:1580351 + A1768 B546 C143 9.73 2.99 new transcription segment 2208 3722
THC0290_N_0867 3prime-PT 1580352:1580535 + A1676 B543 C143 7.25 2.48 new transcription segment 2210 3079
THC0290_miscRNA_0045 Rfp61 misc_RNA 1582336:1582433 - A1769 B546 C143 14.04 4.41 Bacterial small signal recognition particle RNA 2217 3762
THC0290_1372 CDS 1584148:1584330 - A1458 B505 C142 11.65 1.13 Hypothetical protein 2221 2652
THC0290_1383 tdk CDS 1591927:1592535 + A1604 B535 C143 11.53 1.10 Thymidine kinase 2238 2890
THC0290_1385 mscL CDS 1595085:1595501 + A601 B183 C44 13.84 -1.41 Large-conductance mechanosensitive channel 2241 1180
THC0290_tRNA_0022 tRNA 1599447:1599524 + A1768 B546 C143 14.18 3.42 transfer RNA-Val 2249 3669
THC0290_tRNA_0023 tRNA 1604080:1604156 - A762 B226 C62 16.28 1.26 transfer RNA-Ala 2255 1639
THC0290_N_0884 Rfp62 indep 1606778:1606919 + A1243 B419 C125 9.31 1.99 new transcription segment 2258 2325
THC0290_N_0885 intra 1606920:1607067 + A1243 B419 C125 6.77 1.06 new transcription segment 2260 2326
THC0290_1394 infC CDS 1609187:1609600 + A541 B180 C44 12.29 -1.09 Translation initiation factor IF-3 2263 755
THC0290_N_0887 intra 1609601:1609709 + A541 B180 C44 11.40 -2.68 new transcription segment 2264 756
THC0290_1395 rpmI CDS 1609710:1609907 + A82 B37 C15 14.70 -1.29 50S ribosomal protein L35 2265 97
THC0290_N_0888 intra 1609908:1610081 + A82 B37 C15 15.20 -1.14 new transcription segment 2266 98
THC0290_1398 mscS1 (mscS1) CDS 1614223:1616094 - A644 B183 C44 8.87 -1.38 Probable small-conductance mechanosensitive ion channel MscS1 2274 1399
THC0290_N_0893 intra 1616095:1616417 - A601 B183 C44 7.61 -3.03 new transcription segment 2275 1128
THC0290_1399 CDS 1616418:1617146 - A601 B183 C44 8.51 -2.54 Probable transmembrane protein of unknown function 2276 1127
THC0290_1400 aldH CDS 1617164:1618492 - A600 B183 C44 8.90 -1.94 Aldehyde dehydrogenase 2277 1074
THC0290_1401 CDS 1618519:1619214 - A600 B183 C44 9.91 -1.57 Probable 23S rRNA pseudouridine synthase 2278 1077
THC0290_1402 CDS 1619248:1620525 - A600 B183 C44 9.07 -1.22 Probable S41 family peptidase precursor 2279 1100
THC0290_N_0896 intra 1625494:1625575 + A1669 B542 C143 8.74 1.25 new transcription segment 2284 3054
THC0290_N_0898 3prime 1626364:1626511 - A1565 B527 C143 6.85 1.32 new transcription segment 2287 2833
THC0290_N_0899 3prime-PT 1626413:1626925 + A1819 B557 C145 7.01 2.19 new transcription segment 2288 3910
THC0290_1407 CDS 1626512:1627642 - A1054 B347 C103 10.17 1.96 Probable membrane fusion efflux lipoprotein precursor 2289 2020
THC0290_1408 CDS 1627716:1632059 - A1054 B347 C103 10.49 2.77 Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein 2290 2021
THC0290_N_0900 intra 1632060:1632186 - A1054 B347 C103 9.94 3.39 new transcription segment 2291 2019
THC0290_1409 CDS 1632187:1632579 - A1625 B538 C143 12.42 1.32 Protein of unknown function precursor 2292 2936
THC0290_N_0902 5prime 1635372:1635544 + A896 B278 C76 10.48 -1.10 new transcription segment 2297 1825
THC0290_N_0903 Rfp64 indep 1635872:1635993 - A1768 B546 C143 12.28 3.24 new transcription segment 2299 3683
THC0290_1414 ltaE CDS 1636033:1637058 - A1768 B546 C143 10.94 1.55 Threonine aldolase 2300 3637
THC0290_N_0904 5prime 1637059:1637201 - A1768 B546 C143 10.72 1.81 new transcription segment 2301 3639
THC0290_1419 CDS 1642538:1643158 - A1561 B526 C143 10.00 1.26 Putative translation factor 2309 2824
THC0290_1424 CDS 1649508:1651811 + A1787 B549 C143 10.22 2.05 Probable aminotransferase 2316 3838
THC0290_N_0909 3prime 1651812:1652166 + A1795 B549 C143 9.50 2.20 new transcription segment 2317 3867
THC0290_1425 dnaK CDS 1652269:1654149 - A840 B254 C69 13.81 -2.06 Chaperone protein DnaK 2319 1755
THC0290_1427 CDS 1655558:1656199 - A1768 B546 C143 10.06 1.07 Rhomboid family protein 2322 3707
THC0290_N_0916 3prime 1657246:1657531 + A1378 B474 C137 7.91 1.11 new transcription segment 2326 2546
THC0290_N_0917 intra 1658744:1659049 - A590 B183 C44 8.71 -2.06 new transcription segment 2327 937
THC0290_1430 CDS 1659050:1662235 - A581 B183 C44 10.22 -1.08 Putative N6 adenine-specific DNA methyltransferase 2328 891
THC0290_N_0918 intra 1662236:1662355 - A843 B255 C69 10.69 -1.07 new transcription segment 2329 1762
THC0290_1433 CDS 1664543:1665136 + A1762 B546 C143 8.87 2.35 Protein of unknown function 2333 3408
THC0290_N_0921 3prime-PT 1668796:1669027 - A1651 B542 C143 6.84 2.37 new transcription segment 2338 3012
THC0290_N_0923 3prime 1669052:1669388 + A1659 B542 C143 7.92 1.75 new transcription segment 2340 3032
THC0290_1441 speE CDS 1672956:1673624 + A1768 B546 C143 10.14 1.55 Putative spermidine synthase 2350 3701
THC0290_N_0929 3prime 1673625:1673962 + A1644 B540 C143 6.79 1.35 new transcription segment 2352 2990
THC0290_N_0930 intra 1675609:1675691 - A1765 B546 C143 10.33 1.89 new transcription segment 2354 3540
THC0290_1444 CDS 1675692:1676540 - A1762 B546 C143 11.63 2.00 Protein of unknown function 2355 3424
THC0290_N_0931 intra 1677803:1677869 + A595 B183 C44 11.99 -1.14 new transcription segment 2357 978
THC0290_tRNA_0025 tRNA 1681059:1681135 - A1769 B546 C143 13.38 5.04 transfer RNA-Arg 2365 3769
THC0290_N_0937 5prime 1681345:1681454 - A1762 B546 C143 8.74 2.24 new transcription segment 2368 3420
THC0290_N_0938 intra 1682775:1682974 + A609 B183 C44 9.43 -1.93 new transcription segment 2370 1268
THC0290_1449 CDS 1682975:1683736 + A605 B183 C44 10.46 -1.32 Probable cell wall-associated hydrolase 2372 1220
THC0290_1450 yuxK CDS 1683750:1684166 + A601 B183 C44 10.19 -1.58 Protein of unknown function YuxK 2373 1176
THC0290_1451 CDS 1684233:1684379 + A699 B199 C52 11.52 -2.91 Hypothetical protein 2376 1516
THC0290_1456 CDS 1688988:1690139 - A1348 B467 C136 10.83 1.14 Glycosyl transferase, group 1 family protein 2383 2499
THC0290_N_0944 intra 1690140:1690189 - A1768 B546 C143 8.55 1.34 new transcription segment 2384 3643
THC0290_1458 CDS 1691337:1691852 - A493 B173 C44 9.26 -1.74 Protein of unknown function 2386 657
THC0290_1459 CDS 1691900:1692598 - A617 B183 C44 9.76 -1.19 Probable transmembrane protein of unknown function 2387 1313
THC0290_1460 CDS 1692603:1695608 - A493 B173 C44 8.89 -1.07 Glycoside hydrolase precursor family 3, putative beta-N-acetylglucosaminidase 2388 658
THC0290_N_0946 intra 1695609:1695759 - A611 B183 C44 10.21 -2.50 new transcription segment 2389 1287
THC0290_1461 CDS 1695760:1696242 - A619 B183 C44 9.77 -1.62 Protein of unknown function 2390 1327
THC0290_N_0947 intra 1696243:1696494 - A619 B183 C44 10.39 -1.00 new transcription segment 2391 1328
THC0290_1468 yjgF CDS 1704276:1704656 + A595 B183 C44 11.55 -1.78 Protein of unknown function YjgF 2401 966
THC0290_1469 CDS 1704759:1706072 - A600 B183 C44 12.11 -1.27 Protein of unknown function precursor 2404 1055
THC0290_N_0956 intra 1711585:1711685 + A378 B144 C41 4.75 -1.71 new transcription segment 2409 484
THC0290_1473 CDS 1713087:1713590 + A611 B183 C44 9.63 -1.26 Probable transmembrane protein of unknown function 2411 1289
THC0290_N_0969 5prime 1724967:1725040 - A1745 B546 C143 9.51 1.09 new transcription segment 2435 3242
THC0290_1491 CDS 1728002:1728229 + A630 B183 C44 9.39 -1.34 Probable transmembrane protein of unknown function 2443 1361
THC0290_N_0973 intra 1728230:1728476 + A372 B141 C39 9.14 -1.08 new transcription segment 2444 476
THC0290_1493 CDS 1728889:1729749 + A1232 B419 C125 11.29 1.74 Membrane protein, TerC family 2447 2306
THC0290_N_0975 3prime 1729750:1730038 + A1640 B540 C143 12.33 1.16 new transcription segment 2448 2978
THC0290_N_0976 3prime 1730076:1730154 - A1573 B530 C143 9.44 2.31 new transcription segment 2449 2842
THC0290_N_0977 5prime 1732129:1732257 - A1768 B546 C143 10.75 1.46 new transcription segment 2451 3627
THC0290_1496 CDS 1735654:1738056 + A536 B180 C44 12.06 -2.07 Putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits 2454 733
THC0290_N_0983 3prime 1741575:1741661 + A1765 B546 C143 9.87 2.97 new transcription segment 2461 3492
THC0290_1507 CDS 1748731:1750641 - A1017 B325 C88 11.84 2.68 Probable transmembrane protein of unknown function 2473 1972
THC0290_1509 CDS 1752478:1752975 + A1416 B488 C140 8.74 8.71 Protein of unknown function 2477 2595
THC0290_1510 gene 1752990:1753640 + A1416 B488 C140 9.20 7.02 Conserved exported protein of unknown function (fragment) 2479 2596
THC0290_1512 gene 1757982:1758200 + A1696 B546 C143 6.12 2.29 Conserved exported protein of unknown function (fragment) 2481 3107
THC0290_1514 CDS 1759087:1759686 + A1416 B488 C140 11.68 6.51 Probable peroxiredoxin 2484 2593
THC0290_1515 CDS 1759690:1760178 + A1416 B488 C140 11.04 5.05 Protein of unknown function 2485 2594
THC0290_1516 CDS 1760166:1760876 + A1416 B488 C140 10.38 4.84 Protein of unknown function 2486 2592
THC0290_1517 gene 1760953:1761909 + A1416 B488 C140 7.51 4.39 Conserved protein of unknown function 2487 2597
THC0290_1518 CDS 1761915:1762550 + A1416 B488 C140 5.60 3.39 Probable transmembrane protein of unknown function 2488 2598
THC0290_tRNA_0028 tRNA 1770433:1770509 - A1769 B546 C143 9.77 4.09 transfer RNA-Arg 2495 3771
THC0290_1523 CDS 1770583:1770726 - A1768 B546 C143 11.38 1.51 Protein of unknown function 2497 3735
THC0290_N_0996 intra 1770727:1770819 - A1186 B406 C122 9.73 1.78 new transcription segment 2498 2224
THC0290_1524 CDS 1770820:1771647 - A1185 B406 C122 11.38 1.45 Probable lipoprotein precursor 2499 2222
THC0290_1525 CDS 1771652:1774024 - A1185 B406 C122 10.98 1.31 Probable TonB-dependent outer membrane receptor precursor 2500 2223
THC0290_1526 CDS 1774415:1775356 - A1796 B549 C143 10.13 1.73 Protein of unknown function precursor 2501 3879
THC0290_1527 CDS 1775368:1782057 - A1796 B549 C143 11.08 2.20 Protein of unknown function precursor containing a C-terminal secretion signal. Putative adhesin 2502 3880