Differential expression: Freshwater [Water.vs.Ctrl]
Differentially expressed genes in cells maintained during 24h in aquarium containing 10L of dechlorinated water maintained at 10°C under vigorous aeration, relative to standard laboratory condition (TYES 18°C 200 rpm OD600nm=1).
List of differentially expressed genomic elements (CDS and newly identified RNA elements).Statistical analysis was performed with the limma package. Genes were considered as differentially expressed with a log2-fold change ⩾ 1 and a false discovery rate ⩽ 0.05.
Reference samples: LAB_a, LAB_c
Test samples: Water_a, Water_c
Locus Tag | Name (v2) | Feature type | Location | Clusters | Base Expr. | Delta Expr. | Annotation | Chromosome order | Clusters order |
---|---|---|---|---|---|---|---|---|---|
THC0290_0001 | rnr | CDS | 554:2728 + | A1753 B546 C143 | 12.12 | 1.22 | Ribonuclease R | 1 | 3345 |
THC0290_tRNA_0001 | tRNA | 4244:4317 - | A1769 B546 C143 | 11.18 | 4.37 | transfer RNA-Cys | 6 | 3789 | |
THC0290_N_0006 | Rfp1 | indep | 5284:5631 - | A1248 B419 C125 | 7.44 | 3.16 | new transcription segment | 10 | 2357 |
THC0290_0006 | CDS | 7285:7614 + | A1751 B546 C143 | 14.55 | 1.91 | Hypothetical protein precursor | 11 | 3336 | |
THC0290_0007 | CDS | 7614:7964 + | A1768 B546 C143 | 14.54 | 1.28 | Probable transmembrane protein of unknown function | 12 | 3719 | |
THC0290_0008 | CDS | 7968:8222 + | A1768 B546 C143 | 14.49 | 1.56 | Protein of unknown function | 13 | 3720 | |
THC0290_N_0008 | 3prime-PT | 8228:8499 + | A1768 B546 C143 | 8.87 | 4.27 | new transcription segment | 15 | 3687 | |
THC0290_0009 | CDS | 8244:9227 - | A1710 B546 C143 | 13.33 | 2.90 | Band 7 family protein | 16 | 3142 | |
THC0290_N_0010 | Rfp2 | indep | 10630:10929 + | A1248 B419 C125 | 6.67 | 2.51 | new transcription segment | 19 | 2358 |
THC0290_N_0012 | 3prime | 17019:17181 + | A409 B155 C43 | 9.08 | -1.63 | new transcription segment | 24 | 524 | |
THC0290_0014 | CDS | 17182:18030 + | A646 B183 C44 | 9.53 | -1.87 | Probable SAM-dependent methyltransferase | 25 | 1408 | |
THC0290_N_0013 | 3prime | 18031:18294 + | A646 B183 C44 | 8.59 | -2.64 | new transcription segment | 26 | 1409 | |
THC0290_0015 | CDS | 18295:18858 + | A600 B183 C44 | 11.76 | -1.71 | Probable outer membrane lipoprotein precursor, OmpH family | 27 | 1054 | |
THC0290_0018 | CDS | 22763:23272 - | A733 B210 C55 | 10.18 | -1.07 | Probable cAMP-binding protein | 34 | 1603 | |
THC0290_N_0023 | 3prime | 32460:32570 + | A1747 B546 C143 | 6.61 | 1.11 | new transcription segment | 46 | 3264 | |
THC0290_N_0025 | intra | 44155:44282 + | A245 B87 C26 | 10.13 | -2.68 | new transcription segment | 50 | 320 | |
THC0290_0029 | elaA | CDS | 47729:48178 + | A1768 B546 C143 | 10.48 | 1.85 | ElaA protein | 55 | 3677 |
THC0290_N_0028 | 3prime | 48179:48337 + | A1817 B557 C145 | 8.62 | 2.13 | new transcription segment | 57 | 3908 | |
THC0290_N_0029 | Rfp3 | indep | 49141:49425 + | A1768 B546 C143 | 9.63 | 2.24 | new transcription segment | 58 | 3650 |
THC0290_N_0030 | 5prime | 49569:49619 + | A1713 B546 C143 | 10.80 | 1.19 | new transcription segment | 59 | 3152 | |
THC0290_0033 | gldH | CDS | 52515:53027 + | A595 B183 C44 | 11.38 | -1.34 | Gliding motility lipoprotein precursor GldH | 63 | 967 |
THC0290_0034 | mrcA | CDS | 53033:55357 + | A231 B83 C25 | 11.28 | -1.09 | Penicillin-binding protein 1A | 64 | 302 |
THC0290_N_0032 | intra | 55358:55525 + | A231 B83 C25 | 9.21 | -1.79 | new transcription segment | 65 | 303 | |
THC0290_0035 | atoD | CDS | 55526:56224 + | A605 B183 C44 | 11.60 | -1.52 | 3-oxoacid CoA-transferase subunit A family protein AtoD | 67 | 1236 |
THC0290_0036 | CDS | 56236:59862 + | A618 B183 C44 | 11.54 | -1.53 | Probable type I endonuclease-methyltransferase fusion protein | 68 | 1323 | |
THC0290_0037 | atoA | CDS | 59864:60520 + | A618 B183 C44 | 10.61 | -1.38 | 3-oxoacid CoA-transferase subunit B family protein AtoA | 69 | 1322 |
THC0290_N_0033 | 3prime | 60521:60568 + | A691 B195 C50 | 4.65 | -1.58 | new transcription segment | 70 | 1497 | |
THC0290_N_0037 | Rfp4 | indep | 64013:64179 - | A699 B199 C52 | 13.08 | -2.53 | new transcription segment | 77 | 1517 |
THC0290_0041 | CDS | 64242:64637 - | A700 B199 C52 | 12.02 | -2.83 | Cytochrome c551/c552 family protein | 78 | 1523 | |
THC0290_N_0038 | intra | 64654:64878 - | A601 B183 C44 | 8.93 | -2.26 | new transcription segment | 79 | 1126 | |
THC0290_0042 | hemB | CDS | 64879:65871 - | A588 B183 C44 | 8.91 | -1.21 | Porphobilinogen synthase | 80 | 930 |
THC0290_0043 | CDS | 65876:66910 - | A588 B183 C44 | 7.86 | -1.49 | Protein of unknown function | 81 | 928 | |
THC0290_0046 | CDS | 68389:68934 - | A588 B183 C44 | 9.59 | -1.17 | Probable ribosomal-protein-amino-adic N-acetyltransferase | 84 | 933 | |
THC0290_0047 | CDS | 68944:69930 - | A588 B183 C44 | 9.70 | -1.15 | Hypothetical lipoprotein precursor | 85 | 934 | |
THC0290_N_0040 | intra | 70975:71053 - | A588 B183 C44 | 9.00 | -1.53 | new transcription segment | 88 | 926 | |
THC0290_0052 | CDS | 74181:75047 + | A1712 B546 C143 | 10.45 | 1.57 | Probable transcriptional regulator, AraC family | 94 | 3150 | |
THC0290_0053 | hemH | CDS | 75051:76070 + | A1096 B368 C108 | 11.08 | 1.47 | Ferrochelatase | 95 | 2117 |
THC0290_N_0049 | intra | 82738:82791 - | A451 B168 C44 | 7.23 | -1.50 | new transcription segment | 110 | 583 | |
THC0290_0063 | CDS | 85173:85406 + | A1768 B546 C143 | 13.91 | 2.13 | Hypothetical protein | 113 | 3648 | |
THC0290_0072 | proC | CDS | 94366:95142 - | A605 B183 C44 | 11.35 | -1.92 | Pyrroline-5-carboxylate reductase | 128 | 1237 |
THC0290_0073 | mgtE | CDS | 95153:96502 - | A598 B183 C44 | 11.28 | -1.69 | Mg2+ transporter MgtE | 129 | 992 |
THC0290_0074 | ksgA | CDS | 96492:97271 - | A598 B183 C44 | 11.20 | -1.67 | Dimethyladenosine transferase | 130 | 993 |
THC0290_N_0058 | intra | 97272:97344 - | A598 B183 C44 | 10.39 | -1.85 | new transcription segment | 131 | 998 | |
THC0290_0075 | CDS | 97345:97656 - | A486 B172 C44 | 10.97 | -1.74 | Protein of unknown function | 132 | 648 | |
THC0290_0076 | CDS | 97729:99507 - | A485 B172 C44 | 9.66 | -1.48 | Tetratricopeptide repeat domain protein precursor | 134 | 647 | |
THC0290_N_0060 | intra | 99508:99741 - | A486 B172 C44 | 11.49 | -1.96 | new transcription segment | 135 | 649 | |
THC0290_0077 | serS | CDS | 99742:101013 - | A484 B172 C44 | 12.43 | -2.45 | Serine--tRNA ligase | 136 | 645 |
THC0290_N_0061 | intra | 101014:101224 - | A484 B172 C44 | 11.91 | -2.70 | new transcription segment | 137 | 646 | |
THC0290_0078 | CDS | 101225:102457 - | A484 B172 C44 | 12.43 | -2.94 | Protein of unknown function precursor | 138 | 643 | |
THC0290_0079 | CDS | 102454:102894 - | A484 B172 C44 | 12.90 | -2.91 | Protein of unknown function | 139 | 644 | |
THC0290_0080 | CDS | 102896:104074 - | A484 B172 C44 | 12.94 | -2.76 | Probable lipoprotein precursor | 140 | 642 | |
THC0290_0081 | mntH | CDS | 104165:106036 + | A1089 B366 C107 | 11.81 | -1.26 | Probable manganese transport protein mntH | 141 | 2108 |
THC0290_0082 | sirR | CDS | 106330:106983 + | A1072 B359 C105 | 11.29 | -1.18 | Probable metal-dependent transcriptional regulator | 143 | 2043 |
THC0290_tRNA_0002 | tRNA | 109057:109130 - | A1769 B546 C143 | 13.04 | 4.43 | transfer RNA-Asn | 149 | 3770 | |
THC0290_N_0067 | intra | 110638:110698 - | A643 B183 C44 | 5.16 | -2.59 | new transcription segment | 152 | 1398 | |
THC0290_0087 | CDS | 112762:113097 - | A1654 B542 C143 | 9.96 | 3.41 | Probable single-stranded DNA-binding protein | 154 | 3023 | |
THC0290_0090 | pepO | CDS | 115174:117234 - | A600 B183 C44 | 11.83 | -1.81 | M13 family metallopeptidase PepO precursor | 160 | 1070 |
THC0290_0093 | feoA | CDS | 121549:121791 + | A1494 B512 C143 | 10.78 | -1.46 | Ferrous iron transport protein A | 163 | 2709 |
THC0290_0094 | feoB | CDS | 121791:123884 + | A1084 B365 C107 | 8.88 | -2.54 | Ferrous iron transport protein B | 164 | 2074 |
THC0290_N_0071 | intra | 123885:124433 + | A1084 B365 C107 | 9.12 | -2.12 | new transcription segment | 165 | 2075 | |
THC0290_0096 | CDS | 125431:125595 - | A1768 B546 C143 | 6.41 | 2.58 | Hypothetical protein | 167 | 3577 | |
THC0290_N_0074 | 3prime | 129899:129947 + | A1188 B407 C123 | 6.15 | 1.99 | new transcription segment | 174 | 2228 | |
THC0290_N_0076 | 5prime | 131417:131569 + | A205 B75 C24 | 12.58 | -1.07 | new transcription segment | 177 | 256 | |
THC0290_0102 | CDS | 131570:132853 + | A204 B75 C24 | 13.01 | -1.62 | Protein of unknown function | 178 | 252 | |
THC0290_0103 | CDS | 133119:133640 + | A204 B75 C24 | 12.93 | -1.98 | Protein of unknown function precursor | 180 | 254 | |
THC0290_0104 | CDS | 133660:134139 + | A204 B75 C24 | 12.94 | -2.11 | Probable lipoprotein precursor | 181 | 255 | |
THC0290_0105 | CDS | 134151:135113 + | A204 B75 C24 | 12.63 | -1.75 | Protein of unknown function precursor | 182 | 253 | |
THC0290_0106 | CDS | 135128:136084 + | A204 B75 C24 | 13.20 | -1.77 | Protein of unknown function precursor | 183 | 251 | |
THC0290_N_0078 | 3prime | 136085:136144 + | A1747 B546 C143 | 8.58 | 2.79 | new transcription segment | 184 | 3290 | |
THC0290_N_0079 | 3prime | 136118:136225 - | A1763 B546 C143 | 11.61 | 3.51 | new transcription segment | 185 | 3432 | |
THC0290_0107 | CDS | 136226:138043 - | A1763 B546 C143 | 10.83 | 3.87 | Putative outer membrane protein precursor | 186 | 3431 | |
THC0290_0108 | CDS | 138173:140128 - | A1560 B526 C143 | 9.53 | 1.20 | Penicillin-binding protein | 187 | 2823 | |
THC0290_0109 | CDS | 140135:140650 - | A1762 B546 C143 | 10.65 | 1.17 | Hypothetical protein | 188 | 3390 | |
THC0290_0110 | CDS | 140658:140933 - | A1768 B546 C143 | 12.12 | 1.31 | Putative plasmid stabilization system protein | 189 | 3633 | |
THC0290_0111 | CDS | 140930:141169 - | A1768 B546 C143 | 13.05 | 1.79 | Hypothetical protein | 190 | 3634 | |
THC0290_0112 | radA | CDS | 141203:142564 - | A601 B183 C44 | 9.22 | -1.48 | DNA repair protein RadA | 191 | 1117 |
THC0290_0116 | panC | CDS | 145223:146071 - | A605 B183 C44 | 10.32 | -1.30 | Pantoate--beta-alanine ligase | 195 | 1248 |
THC0290_0119 | glmS | CDS | 148660:150507 + | A599 B183 C44 | 12.90 | -1.01 | Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] | 198 | 1018 |
THC0290_0121 | CDS | 153715:155214 + | A1785 B548 C143 | 12.40 | 1.03 | Probable lipoprotein precursor | 201 | 3836 | |
THC0290_0122 | atpD | CDS | 155419:156930 + | A600 B183 C44 | 13.50 | -1.01 | ATP synthase beta subunit | 204 | 1096 |
THC0290_N_0086 | intra | 156931:157009 + | A639 B183 C44 | 9.57 | -2.81 | new transcription segment | 205 | 1387 | |
THC0290_0123 | atpC | CDS | 157010:157291 + | A600 B183 C44 | 13.29 | -1.60 | ATP synthase epsilon subunit | 206 | 1097 |
THC0290_0128 | CDS | 159521:159862 + | A1244 B419 C125 | 12.30 | 1.47 | Protein of unknown function precursor | 213 | 2347 | |
THC0290_0129 | CDS | 159979:160953 + | A1248 B419 C125 | 12.96 | 2.16 | Putative outer membrane protein precursor | 215 | 2360 | |
THC0290_0130 | CDS | 161008:162009 + | A1715 B546 C143 | 9.62 | 1.89 | Probable acyl-protein synthetase | 217 | 3160 | |
THC0290_N_0091 | 3prime | 162010:162767 + | A1820 B557 C145 | 7.99 | 2.21 | new transcription segment | 218 | 3912 | |
THC0290_0134 | CDS | 164278:164808 + | A1448 B502 C142 | 9.93 | 2.09 | Probable transmembrane protein of unknown function | 227 | 2637 | |
THC0290_N_0096 | 3prime | 164809:165563 + | A191 B70 C21 | 7.85 | 1.94 | new transcription segment | 229 | 237 | |
THC0290_N_0097 | repeated_region | 165536:166702 - | A677 B189 C46 | 13.22 | -2.39 | new transcription segment | 230 | 1468 | |
THC0290_0136 | batD | CDS | 166703:168505 - | A677 B189 C46 | 10.09 | -1.59 | BatD protein | 231 | 1467 |
THC0290_0137 | batC | CDS | 168527:169240 - | A677 B189 C46 | 10.14 | -1.13 | BatC protein | 232 | 1463 |
THC0290_N_0098 | repeated_region | 169241:170135 - | A677 B189 C46 | 14.84 | -1.76 | new transcription segment | 233 | 1465 | |
THC0290_0138 | batB | CDS | 170136:171176 - | A677 B189 C46 | 10.41 | -1.65 | BatB protein | 234 | 1461 |
THC0290_N_0099 | intra | 171177:171320 - | A677 B189 C46 | 10.40 | -1.36 | new transcription segment | 235 | 1464 | |
THC0290_0139 | CDS | 171321:171701 - | A677 B189 C46 | 10.27 | -1.40 | Protein of unknown function | 236 | 1462 | |
THC0290_N_0100 | intra | 171702:171755 - | A677 B189 C46 | 12.53 | -1.75 | new transcription segment | 237 | 1466 | |
THC0290_0140 | batA | CDS | 171756:172757 - | A677 B189 C46 | 10.38 | -1.45 | BatA protein | 238 | 1460 |
THC0290_0141 | CDS | 172759:174345 - | A677 B189 C46 | 10.15 | -1.57 | Probable transmembrane protein of unknown function | 239 | 1459 | |
THC0290_N_0101 | repeated_region | 174346:176105 - | A672 B188 C46 | 15.57 | -1.38 | new transcription segment | 240 | 1448 | |
THC0290_0142 | CDS | 176106:176972 - | A545 B180 C44 | 11.37 | -1.97 | Protein of unknown function | 241 | 770 | |
THC0290_0146 | CDS | 180146:180661 + | A600 B183 C44 | 12.16 | -1.05 | Probable outer membrane protein precursor, OmpA family | 247 | 1092 | |
THC0290_0147 | phnA | CDS | 180747:181328 + | A515 B180 C44 | 10.31 | -1.41 | PhnA protein | 249 | 687 |
THC0290_N_0105 | 3prime | 181329:181417 - | A1593 B534 C143 | 9.80 | 1.93 | new transcription segment | 250 | 2868 | |
THC0290_N_0107 | Rfp11 | indep | 182563:182671 + | A1768 B546 C143 | 7.02 | 6.19 | new transcription segment | 253 | 3598 |
THC0290_0149 | CDS | 182667:183833 - | A819 B248 C68 | 13.42 | 1.19 | Probable alcohol dehydrogenase | 255 | 1722 | |
THC0290_N_0109 | Rfp12 | indep | 184225:184363 + | A1768 B546 C143 | 8.29 | 2.39 | new transcription segment | 257 | 3665 |
THC0290_N_0112 | intra | 187683:187830 - | A494 B173 C44 | 9.36 | -1.89 | new transcription segment | 259 | 660 | |
THC0290_0152 | pgi | CDS | 187831:189474 - | A595 B183 C44 | 11.06 | -1.38 | Glucose-6-phosphate isomerase | 260 | 952 |
THC0290_tRNA_0003 | tRNA | 191432:191514 + | A1769 B546 C143 | 14.58 | 3.09 | transfer RNA-Leu | 265 | 3761 | |
THC0290_tRNA_0004 | tRNA | 191804:191888 - | A1768 B546 C143 | 10.49 | 4.23 | transfer RNA-Leu | 267 | 3657 | |
THC0290_0157 | CDS | 194650:195750 + | A1765 B546 C143 | 9.65 | 3.19 | Probable transmembrane protein of unknown function | 272 | 3507 | |
THC0290_N_0123 | 3prime | 198042:198354 - | A616 B183 C44 | 8.69 | 1.10 | new transcription segment | 275 | 1303 | |
THC0290_N_0125 | 3prime | 201124:201191 - | A1850 B569 C149 | 10.04 | 3.42 | new transcription segment | 278 | 3948 | |
THC0290_0162 | kbl | CDS | 202693:203889 - | A600 B183 C44 | 11.72 | -1.22 | Glycine C-acetyltransferase | 281 | 1071 |
THC0290_N_0128 | 3prime | 207980:208039 + | A1604 B535 C143 | 9.09 | 1.25 | new transcription segment | 286 | 2886 | |
THC0290_N_0130 | Rfp14 | indep | 208381:208488 + | A1765 B546 C143 | 8.57 | 1.34 | new transcription segment | 288 | 3520 |
THC0290_0166 | CDS | 210086:211081 + | A1768 B546 C143 | 8.96 | 1.22 | Protein of unknown function | 291 | 3717 | |
THC0290_N_0133 | 3prime | 211082:211240 + | A1768 B546 C143 | 8.25 | 2.37 | new transcription segment | 294 | 3681 | |
THC0290_0170 | CDS | 213837:215033 - | A1083 B365 C107 | 14.11 | -2.92 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 297 | 2068 | |
THC0290_0171 | CDS | 215347:216612 - | A1083 B365 C107 | 12.92 | -3.07 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 299 | 2066 | |
THC0290_0172 | CDS | 216630:217619 - | A1083 B365 C107 | 12.96 | -2.48 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 300 | 2071 | |
THC0290_0173 | CDS | 217635:218969 - | A1083 B365 C107 | 13.58 | -2.65 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 301 | 2069 | |
THC0290_0174 | CDS | 219283:220551 - | A1083 B365 C107 | 12.97 | -2.87 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 302 | 2072 | |
THC0290_0175 | CDS | 220567:221559 - | A1083 B365 C107 | 13.17 | -3.22 | Probable cell surface protein (Leucine-rich repeat protein) | 303 | 2073 | |
THC0290_0176 | CDS | 221575:222702 - | A1083 B365 C107 | 13.19 | -2.95 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 304 | 2070 | |
THC0290_N_0139 | intra | 222703:223027 - | A1083 B365 C107 | 11.64 | -3.66 | new transcription segment | 305 | 2065 | |
THC0290_0177 | CDS | 223028:224638 - | A1083 B365 C107 | 14.27 | -1.91 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 306 | 2059 | |
THC0290_N_0140 | repeated_region | 224639:224914 - | A1083 B365 C107 | 9.43 | -2.81 | new transcription segment | 307 | 2061 | |
THC0290_0178 | CDS | 224965:225888 - | A1083 B365 C107 | 13.38 | -2.77 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 308 | 2067 | |
THC0290_0179 | CDS | 225904:227169 - | A1083 B365 C107 | 14.39 | -3.15 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 309 | 2063 | |
THC0290_0180 | CDS | 227183:228379 - | A1083 B365 C107 | 14.58 | -3.28 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 310 | 2064 | |
THC0290_0181 | CDS | 228393:229796 - | A1083 B365 C107 | 11.98 | -2.75 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 311 | 2060 | |
THC0290_N_0142 | repeated_region | 229797:230072 - | A1083 B365 C107 | 9.23 | -3.02 | new transcription segment | 312 | 2062 | |
THC0290_0182 | CDS | 230123:231112 - | A1083 B365 C107 | 10.81 | -3.73 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 313 | 2056 | |
THC0290_0183 | CDS | 231127:232047 - | A1083 B365 C107 | 12.35 | -3.52 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 314 | 2057 | |
THC0290_0184 | CDS | 232062:233117 - | A1083 B365 C107 | 10.37 | -3.57 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 315 | 2058 | |
THC0290_0185 | CDS | 233132:234121 - | A1088 B365 C107 | 9.99 | -4.31 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 316 | 2088 | |
THC0290_0186 | CDS | 234136:235122 - | A1088 B365 C107 | 10.59 | -3.11 | Probable cell surface protein (Leucine-rich repeat protein) precursor | 317 | 2085 | |
THC0290_N_0144 | intra | 237144:237208 + | A586 B183 C44 | 10.58 | -1.94 | new transcription segment | 320 | 914 | |
THC0290_0190 | CDS | 238052:238456 - | A480 B171 C44 | 9.38 | -1.51 | Probable protein chain release factor | 324 | 633 | |
THC0290_0191 | CDS | 238456:240570 - | A581 B183 C44 | 9.67 | -2.02 | Probable bifunctional protein : transcriptional regulator NadR family and of unknown function | 325 | 890 | |
THC0290_N_0147 | 3prime | 244080:244141 + | A1670 B542 C143 | 8.96 | 2.89 | new transcription segment | 331 | 3059 | |
THC0290_0200 | CDS | 250231:250752 + | A1715 B546 C143 | 11.93 | 1.64 | Hypothetical protein | 340 | 3158 | |
THC0290_0201 | CDS | 250719:251186 - | A1765 B546 C143 | 9.78 | 2.27 | Adenylate cyclase family protein | 341 | 3466 | |
THC0290_N_0154 | 3prime | 250753:251441 + | A1248 B419 C125 | 9.69 | 1.40 | new transcription segment | 342 | 2356 | |
THC0290_N_0155 | 5prime | 251187:251301 - | A1768 B546 C143 | 9.93 | 2.04 | new transcription segment | 343 | 3653 | |
THC0290_0205 | purN | CDS | 255026:255595 - | A526 B180 C44 | 8.47 | -1.11 | Phosphoribosylglycinamide formyltransferase | 351 | 711 |
THC0290_0207 | fabF | CDS | 256359:257609 + | A605 B183 C44 | 13.08 | -1.34 | 3-oxoacyl-(acyl-carrier-protein) synthase II | 356 | 1219 |
THC0290_0208 | rnc | CDS | 257618:258358 + | A600 B183 C44 | 9.68 | -1.38 | Ribonuclease III | 357 | 1113 |
THC0290_N_0164 | intra | 258359:258452 + | A601 B183 C44 | 9.08 | -1.22 | new transcription segment | 358 | 1120 | |
THC0290_0209 | CDS | 258470:258949 + | A970 B307 C84 | 10.45 | 1.32 | Protein of unknown function | 359 | 1916 | |
THC0290_N_0167 | intra | 261251:261325 - | A50 B27 C13 | 8.37 | -1.07 | new transcription segment | 363 | 57 | |
THC0290_0212 | CDS | 261326:261682 - | A609 B183 C44 | 8.02 | -1.21 | Protein of unknown function MmcQ | 364 | 1271 | |
THC0290_0214 | CDS | 262521:263654 - | A609 B183 C44 | 7.79 | -1.53 | Probable coproporphyrinogen oxidase | 366 | 1280 | |
THC0290_N_0169 | Rfp17 | indep | 266572:266801 + | A1747 B546 C143 | 8.54 | 1.21 | new transcription segment | 373 | 3298 |
THC0290_0219 | CDS | 266940:267446 + | A1747 B546 C143 | 8.08 | 1.16 | Hypothetical protein | 374 | 3297 | |
THC0290_N_0171 | intra | 268051:268199 - | A1790 B549 C143 | 12.19 | 1.43 | new transcription segment | 377 | 3845 | |
THC0290_0221 | CDS | 268200:268898 - | A1790 B549 C143 | 12.54 | 1.48 | Protein of unknown function precursor | 378 | 3844 | |
THC0290_0222 | CDS | 268913:269659 - | A1762 B546 C143 | 11.81 | 2.03 | Protein of unknown function precursor | 379 | 3403 | |
THC0290_N_0174 | 3prime | 274463:274834 + | A1726 B546 C143 | 8.75 | 1.49 | new transcription segment | 386 | 3187 | |
THC0290_N_0184 | Rfp19 | indep | 297507:297566 + | A1408 B485 C140 | 15.28 | 1.70 | new transcription segment | 410 | 2582 |
THC0290_0242 | CDS | 297963:298367 - | A1768 B546 C143 | 10.99 | 1.16 | Probable lyase | 413 | 3625 | |
THC0290_0244 | CDS | 298971:300170 + | A1765 B546 C143 | 11.68 | 1.33 | Probable ABC-type transport system, permease component | 416 | 3519 | |
THC0290_N_0186 | 3prime | 300171:300903 + | A1768 B546 C143 | 8.16 | 3.16 | new transcription segment | 417 | 3688 | |
THC0290_0246 | aroA | CDS | 301503:302732 - | A601 B183 C44 | 8.53 | -1.60 | 3-phosphoshikimate 1-carboxyvinyltransferase | 420 | 1121 |
THC0290_0248 | CDS | 303303:303749 - | A358 B136 C39 | 8.41 | -1.78 | Protein of unknown function | 423 | 459 | |
THC0290_0249 | CDS | 303781:304143 - | A359 B136 C39 | 10.32 | -2.52 | Hypothetical protein Putative pseudogene | 424 | 460 | |
THC0290_N_0189 | intra | 304144:304193 - | A678 B190 C47 | 7.45 | -2.13 | new transcription segment | 425 | 1469 | |
THC0290_0250 | CDS | 304194:304376 - | A357 B136 C39 | 8.79 | -1.68 | Hypothetical protein | 426 | 457 | |
THC0290_0251 | CDS | 304650:305642 - | A372 B141 C39 | 8.37 | -1.03 | Protein of unknown function | 428 | 474 | |
THC0290_0252 | CDS | 305655:308825 - | A588 B183 C44 | 8.60 | -1.40 | Probable type II endonuclease-methyltransferase fusion protein | 429 | 924 | |
THC0290_0254 | rsgA | CDS | 309432:310412 - | A721 B205 C53 | 10.39 | 1.08 | Putative ribosome biogenesis GTPase RsgA | 432 | 1575 |
THC0290_N_0193 | 5prime | 310413:310478 - | A721 B205 C53 | 9.46 | 1.06 | new transcription segment | 433 | 1576 | |
THC0290_0255 | CDS | 310522:311604 - | A721 B205 C53 | 9.91 | 1.22 | Putative phospho-2-dehydro-3-deoxyheptonate aldolase | 434 | 1574 | |
THC0290_0256 | aspC3 | CDS | 311724:312935 - | A719 B205 C53 | 8.42 | 1.79 | Probable aspartate transaminase AspC3 | 436 | 1568 |
THC0290_0257 | pheA | CDS | 312932:313768 - | A719 B205 C53 | 8.20 | 1.87 | Prephenate dehydratase | 437 | 1569 |
THC0290_0262 | metX | CDS | 318651:319652 - | A726 B207 C54 | 5.60 | 1.49 | Homoserine O-acetyltransferase | 446 | 1584 |
THC0290_0263 | metY | CDS | 319731:321023 - | A726 B207 C54 | 6.96 | 2.07 | Probable O-acetylhomoserine aminocarboxypropyltransferase | 447 | 1585 |
THC0290_N_0198 | Rfp20 | indep | 321293:321392 - | A1435 B498 C142 | 7.55 | 3.88 | new transcription segment | 448 | 2619 |
THC0290_0271 | CDS | 329327:329941 + | A1731 B546 C143 | 8.31 | 1.39 | Truncated Eco57I restriction-modification methylase family protein | 460 | 3199 | |
THC0290_0276 | CDS | 334046:334363 - | A1709 B546 C143 | 14.76 | 1.59 | Thioredoxin family protein | 468 | 3133 | |
THC0290_N_0208 | 3prime | 335720:335801 - | A329 B122 C33 | 11.63 | -1.12 | new transcription segment | 471 | 417 | |
THC0290_0279 | CDS | 336416:337207 - | A1671 B543 C143 | 8.06 | 1.43 | Hypothetical protein precursor | 473 | 3063 | |
THC0290_0281 | gene | 337517:337570 + | A1747 B546 C143 | 9.04 | 1.57 | Truncated protein C-terminal region | 475 | 3274 | |
THC0290_0283 | gene | 338551:338808 + | A595 B183 C44 | 7.99 | -1.17 | Fragment of hypothetical protein (part 1) | 477 | 965 | |
THC0290_0287 | metK | CDS | 343737:344987 - | A854 B257 C70 | 11.77 | -1.17 | Methionine adenosyltransferase | 484 | 1776 |
THC0290_0289 | CDS | 346364:348646 - | A1343 B465 C135 | 10.06 | 1.54 | Protein of unknown function precursor, putative immunoreactive 84 kDa antigen | 489 | 2494 | |
THC0290_N_0216 | 3prime | 355371:355427 + | A1608 B535 C143 | 10.49 | 3.49 | new transcription segment | 497 | 2896 | |
THC0290_N_0217 | 3prime | 355417:355516 - | A1643 B540 C143 | 9.76 | 2.13 | new transcription segment | 498 | 2985 | |
THC0290_0296 | CDS | 355517:355957 - | A1768 B546 C143 | 10.98 | 1.78 | Probable cytosine/adenosine deaminase | 499 | 3623 | |
THC0290_0297 | CDS | 356020:356607 + | A1243 B419 C125 | 9.97 | 2.35 | Protein of unknown function | 500 | 2328 | |
THC0290_0298 | dxs | CDS | 356654:358429 + | A1252 B419 C125 | 9.32 | 1.24 | 1-deoxy-D-xylulose-5-phosphate synthase | 501 | 2370 |
THC0290_0299 | CDS | 358481:361225 - | A605 B183 C44 | 13.85 | -1.55 | Probable M36 fungalysin family metalloprotease precursor | 502 | 1224 | |
THC0290_N_0221 | intra | 366003:366148 - | A230 B83 C25 | 10.88 | -1.36 | new transcription segment | 507 | 300 | |
THC0290_0304 | CDS | 370460:371698 + | A1348 B467 C136 | 9.27 | 1.77 | Probable transmembrane protein of unknown function | 510 | 2500 | |
THC0290_N_0227 | 3prime-PT | 380006:380541 + | A1168 B401 C121 | 7.34 | 2.61 | new transcription segment | 521 | 2203 | |
THC0290_0312 | yggG | CDS | 381240:382067 + | A1762 B546 C143 | 13.79 | 1.16 | Putative secreted M48 family metalloprotease YggG precursor | 523 | 3398 |
THC0290_0321 | CDS | 392440:393687 + | A1765 B546 C143 | 8.74 | 1.11 | Protein of unknown function | 537 | 3465 | |
THC0290_0324 | CDS | 395386:395604 + | A1767 B546 C143 | 11.59 | 1.07 | Hypothetical protein | 541 | 3574 | |
THC0290_0330 | CDS | 399755:400099 - | A1767 B546 C143 | 9.39 | 1.40 | Putative transcriptional regulator | 552 | 3572 | |
THC0290_N_0243 | 5prime | 400566:400739 + | A1763 B546 C143 | 9.91 | 3.40 | new transcription segment | 554 | 3445 | |
THC0290_0340 | ubiE | CDS | 417706:418437 - | A68 B33 C14 | 11.03 | 1.09 | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE | 565 | 78 |
THC0290_N_0248 | Rfp25 | indep | 418605:418919 + | A1760 B546 C143 | 13.66 | 5.27 | new transcription segment | 566 | 3379 |
THC0290_N_0249 | 3prime | 418955:419131 - | A557 B183 C44 | 8.19 | -1.20 | new transcription segment | 567 | 814 | |
THC0290_N_0250 | intra | 423143:423212 - | A605 B183 C44 | 9.74 | -1.28 | new transcription segment | 572 | 1247 | |
THC0290_N_0252 | 3prime | 424075:424125 - | A689 B194 C49 | 8.36 | 2.89 | new transcription segment | 576 | 1495 | |
THC0290_0349 | CDS | 427298:429790 + | A600 B183 C44 | 10.74 | -1.05 | Probable outer membrane protein precursor | 582 | 1094 | |
THC0290_0350 | ppa | CDS | 430070:430600 + | A600 B183 C44 | 12.81 | -1.17 | Inorganic diphosphatase | 584 | 1090 |
THC0290_0354 | rpbA | CDS | 438303:438704 - | A971 B307 C84 | 14.14 | 1.93 | Putative RNA-binding protein RbpA | 591 | 1918 |
THC0290_0357 | rimM | CDS | 440423:440947 + | A600 B183 C44 | 11.10 | -1.30 | 16S rRNA processing protein RimM | 595 | 1111 |
THC0290_N_0262 | intra | 440948:441076 + | A600 B183 C44 | 10.17 | -1.24 | new transcription segment | 596 | 1112 | |
THC0290_0358 | yfiC | CDS | 441077:441781 + | A600 B183 C44 | 8.64 | -1.21 | Protein of unknown function YfiC | 597 | 1057 |
THC0290_N_0263 | 3prime-PT | 441466:441936 - | A1760 B546 C143 | 9.45 | 2.78 | new transcription segment | 598 | 3375 | |
THC0290_N_0269 | 3prime-PT | 448689:448837 - | A1795 B549 C143 | 9.39 | 5.30 | new transcription segment | 612 | 3859 | |
THC0290_N_0270 | 3prime | 448810:448861 + | A1363 B469 C136 | 10.33 | 1.23 | new transcription segment | 613 | 2526 | |
THC0290_N_0271 | 3prime | 448838:448909 - | A1795 B549 C143 | 10.98 | 7.23 | new transcription segment | 614 | 3861 | |
THC0290_N_0272 | 3prime-PT | 448862:449419 + | A1351 B467 C136 | 9.71 | 2.90 | new transcription segment | 615 | 2509 | |
THC0290_0367 | CDS | 448910:449260 - | A1795 B549 C143 | 13.10 | 5.99 | Protein of unknown function precursor | 616 | 3860 | |
THC0290_0368 | CDS | 449469:450680 - | A1670 B542 C143 | 9.02 | 3.31 | Probable lipoprotein precursor | 617 | 3060 | |
THC0290_0369 | CDS | 450870:453704 - | A1670 B542 C143 | 7.97 | 2.80 | Probable TonB-dependent outer membrane receptor precursor | 618 | 3061 | |
THC0290_0370 | phoP | CDS | 453885:454571 + | A1767 B546 C143 | 10.97 | 2.28 | Two-component system response regulatory protein involved in phosphate regulation | 619 | 3567 |
THC0290_0372 | oprP | CDS | 455757:457094 + | A1492 B512 C143 | 10.56 | 1.83 | Probable phosphate-selective porin precursor | 621 | 2706 |
THC0290_0373 | pstS | CDS | 457114:457947 + | A1492 B512 C143 | 11.59 | 1.81 | ABC-type phosphate-transport system, binding protein precursor component PstS | 622 | 2707 |
THC0290_N_0274 | intra | 457948:458037 + | A1492 B512 C143 | 7.47 | 1.08 | new transcription segment | 623 | 2705 | |
THC0290_0374 | pstC | CDS | 458038:459189 + | A1492 B512 C143 | 10.24 | 1.17 | ABC-type phosphate-transport system, permease component PstC | 624 | 2701 |
THC0290_0379 | CDS | 462838:463659 - | A1670 B542 C143 | 7.82 | 2.26 | Protein of unknown function | 629 | 3062 | |
THC0290_0383 | CDS | 465657:466046 - | A1766 B546 C143 | 8.85 | 1.80 | Protein of unknown function precursor | 636 | 3565 | |
THC0290_0392 | CDS | 477872:478558 + | A1711 B546 C143 | 10.10 | 1.48 | Protein of unknown function precursor | 649 | 3148 | |
THC0290_N_0282 | 3prime | 478559:479025 + | A1711 B546 C143 | 9.51 | 1.64 | new transcription segment | 651 | 3146 | |
THC0290_0395 | CDS | 481952:482293 - | A1413 B488 C140 | 5.78 | 3.54 | Hypothetical protein | 655 | 2588 | |
THC0290_N_0285 | 3prime | 482258:482799 + | A1362 B469 C136 | 7.00 | 1.07 | new transcription segment | 656 | 2525 | |
THC0290_tRNA_0008 | tRNA | 483382:483469 - | A1769 B546 C143 | 12.63 | 4.51 | transfer RNA-Leu | 658 | 3763 | |
THC0290_tRNA_0009 | tRNA | 483510:483585 - | A1769 B546 C143 | 13.12 | 4.20 | transfer RNA-Gly | 659 | 3765 | |
THC0290_0397 | mutS | CDS | 483724:486324 - | A595 B183 C44 | 9.86 | -1.64 | DNA mismatch repair protein MutS | 660 | 953 |
THC0290_0399 | CDS | 487057:487605 + | A1753 B546 C143 | 9.34 | 1.45 | Probable tRNA/rRNA methyltransferase | 663 | 3351 | |
THC0290_N_0290 | 3prime | 487606:488796 + | A1644 B540 C143 | 7.61 | 1.13 | new transcription segment | 665 | 2987 | |
THC0290_0401 | sppA | CDS | 488868:490631 + | A1395 B479 C139 | 10.86 | 1.10 | Protease IV (signal peptide peptidase) | 667 | 2569 |
THC0290_0408 | galE | CDS | 499324:500355 + | A601 B183 C44 | 11.16 | -1.08 | UDP-glucose 4-epimerase | 681 | 1140 |
THC0290_N_0298 | 3prime-PT | 500352:500565 - | A1760 B546 C143 | 9.81 | 2.78 | new transcription segment | 682 | 3376 | |
THC0290_0409 | CDS | 500600:500857 - | A1613 B535 C143 | 15.24 | 1.46 | Hypothetical lipoprotein precursor | 684 | 2905 | |
THC0290_N_0303 | intra | 501925:502073 - | A587 B183 C44 | 7.22 | -1.61 | new transcription segment | 687 | 920 | |
THC0290_0415 | CDS | 505149:506246 - | A1417 B489 C140 | 11.77 | 1.17 | Fatty acid desaturase | 694 | 2599 | |
THC0290_0416 | gidB | CDS | 506352:506981 + | A1760 B546 C143 | 10.28 | 1.06 | Methyltransferase GidB | 695 | 3370 |
THC0290_0418 | apaG | CDS | 509450:509836 - | A1702 B546 C143 | 13.32 | 1.61 | Protein ApaG | 700 | 3120 |
THC0290_0424 | CDS | 514770:516161 - | A1719 B546 C143 | 9.42 | 2.54 | Probable outer membrane efflux protein precursor | 707 | 3167 | |
THC0290_0425 | CDS | 516165:517523 - | A1719 B546 C143 | 10.40 | 3.50 | Probable ABC-type transport system, membrane fusion efflux protein component | 708 | 3168 | |
THC0290_0426 | CDS | 517529:519190 - | A1719 B546 C143 | 10.54 | 4.03 | Probable ABC-type transport system, ATPase and permease components | 709 | 3169 | |
THC0290_0427 | CDS | 519196:519870 - | A1719 B546 C143 | 10.41 | 4.81 | Probable transcriptional regulator, TetR family | 710 | 3166 | |
THC0290_0429 | CDS | 521589:522020 + | A1509 B519 C143 | 8.86 | 1.38 | Hypothetical transmembrane protein | 712 | 2728 | |
THC0290_N_0311 | intra | 524398:524889 + | A1765 B546 C143 | 9.10 | 1.41 | new transcription segment | 716 | 3534 | |
THC0290_miscRNA_0002 | misc_RNA | 524890:524985 + | A1765 B546 C143 | 11.04 | 2.05 | TPP riboswitch [THI element] | 717 | 3484 | |
THC0290_N_0312 | intra | 524986:525051 + | A729 B209 C54 | 11.02 | 1.59 | new transcription segment | 718 | 1595 | |
THC0290_0431 | thiS | CDS | 525052:525258 + | A730 B209 C54 | 7.66 | 1.09 | Thiamine biosynthesis protein ThiS | 719 | 1598 |
THC0290_0433 | thiE1 | CDS | 527232:527831 + | A728 B209 C54 | 5.79 | -2.32 | Thiamine-phosphate diphosphorylase | 723 | 1589 |
THC0290_0434 | thiD | CDS | 527804:528562 + | A728 B209 C54 | 5.75 | -1.40 | Phosphomethylpyrimidine kinase | 724 | 1593 |
THC0290_0436 | thiG | CDS | 529175:529945 + | A728 B209 C54 | 6.37 | -1.02 | Thiazole biosynthesis protein ThiG | 726 | 1594 |
THC0290_0438 | thiF | CDS | 531214:531924 + | A728 B209 C54 | 5.87 | -1.90 | Molybdopterin and thiamine biosynthesis protein | 729 | 1591 |
THC0290_0453 | ilvD | CDS | 549225:550901 - | A1197 B412 C124 | 6.22 | 1.18 | Dihydroxy-acid dehydratase | 750 | 2240 |
THC0290_N_0328 | 3prime-PT | 553432:553812 + | A87 B41 C15 | 8.21 | 1.53 | new transcription segment | 756 | 103 | |
THC0290_0456 | CDS | 553650:554273 - | A702 B199 C52 | 11.77 | -2.47 | Putative sensor (PAS) domain for methyl-accepting chemotaxis sensory transducer | 757 | 1530 | |
THC0290_0457 | tsf | CDS | 554438:555262 - | A599 B183 C44 | 12.79 | -1.90 | Elongation factor Ts (EF-Ts) | 758 | 1008 |
THC0290_N_0331 | intra | 555263:555363 - | A599 B183 C44 | 11.07 | -3.63 | new transcription segment | 759 | 1009 | |
THC0290_0458 | rpsB | CDS | 555364:556164 - | A638 B183 C44 | 13.73 | -1.68 | 30S ribosomal protein S2 | 760 | 1381 |
THC0290_N_0332 | intra | 556165:556317 - | A638 B183 C44 | 14.55 | -1.35 | new transcription segment | 761 | 1382 | |
THC0290_0461 | nrdA | CDS | 557960:560380 - | A382 B145 C41 | 11.74 | -1.25 | Ribonucleoside-diphosphate reductase, alpha subunit | 765 | 490 |
THC0290_0465 | CDS | 563356:563559 + | A1753 B546 C143 | 13.06 | 1.64 | Hypothetical protein | 772 | 3354 | |
THC0290_0466 | CDS | 563559:564167 + | A1753 B546 C143 | 11.52 | 1.21 | Putative pyridine nucleotide-disulphide oxidoreductase, class-II family protein | 773 | 3353 | |
THC0290_N_0336 | 3prime | 564168:564864 + | A1252 B419 C125 | 8.74 | 2.63 | new transcription segment | 775 | 2374 | |
THC0290_N_0339 | 3prime-PT | 567081:567646 - | A1760 B546 C143 | 8.85 | 4.15 | new transcription segment | 782 | 3374 | |
THC0290_0470 | CDS | 567208:567639 + | A1768 B546 C143 | 12.82 | 1.96 | Protein of unknown function | 783 | 3644 | |
THC0290_N_0343 | 5prime | 568633:568691 + | A962 B306 C84 | 4.92 | -1.61 | new transcription segment | 786 | 1904 | |
THC0290_tRNA_0011 | tRNA | 576781:576857 + | A762 B226 C62 | 16.25 | 1.26 | transfer RNA-Ala | 795 | 1637 | |
THC0290_0475 | gene | 580335:580526 - | A1765 B546 C143 | 8.98 | 1.51 | Transposase (fragment) | 799 | 3490 | |
THC0290_0476 | gene | 580874:581557 - | A1744 B546 C143 | 5.57 | 1.56 | Fragment of transposase (fragment) (part 1) | 801 | 3228 | |
THC0290_0477 | gene | 581578:581844 - | A1768 B546 C143 | 7.84 | 2.39 | Truncated transposase IS256 family, N-terminal region | 802 | 3618 | |
THC0290_N_0351 | repeated_region | 585398:586012 - | A1765 B546 C143 | 9.28 | 1.65 | new transcription segment | 808 | 3522 | |
THC0290_0482 | CDS | 586087:587670 + | A1765 B546 C143 | 9.25 | 2.54 | Transposase IS1182 family | 809 | 3526 | |
THC0290_0483 | CDS | 587775:588839 - | A1765 B546 C143 | 9.63 | 1.31 | Hypothetical transmembrane protein | 810 | 3470 | |
THC0290_N_0354 | 5prime | 589619:589720 - | A1747 B546 C143 | 8.43 | 1.11 | new transcription segment | 814 | 3300 | |
THC0290_0485 | CDS | 589753:591324 + | A1765 B546 C143 | 9.15 | 2.15 | Transposase IS1182 family | 815 | 3527 | |
THC0290_0487 | CDS | 592935:594287 + | A841 B255 C69 | 10.98 | -2.96 | Protein of unknown function | 817 | 1757 | |
THC0290_0488 | CDS | 594274:594957 + | A841 B255 C69 | 10.21 | -2.60 | Protein of unknown function | 818 | 1758 | |
THC0290_0496 | gene | 601969:602310 + | A1765 B546 C143 | 8.98 | 1.52 | Truncated transposase IS1182 family | 831 | 3525 | |
THC0290_0502 | CDS | 608390:609994 + | A1765 B546 C143 | 9.03 | 2.11 | Transposase IS1182 family | 839 | 3528 | |
THC0290_N_0363 | repeated_region | 609996:610101 - | A1765 B546 C143 | 11.88 | 1.63 | new transcription segment | 840 | 3535 | |
THC0290_0503 | CDS | 610102:610602 - | A1765 B546 C143 | 10.90 | 1.75 | Protein of unknown function precursor | 841 | 3544 | |
THC0290_0504 | CDS | 611442:612659 + | A1765 B546 C143 | 8.68 | 1.26 | Probable transposase | 843 | 3543 | |
THC0290_N_0365 | 5prime | 612761:612929 + | A1762 B546 C143 | 11.30 | 1.56 | new transcription segment | 844 | 3416 | |
THC0290_0505 | CDS | 612930:613817 + | A1593 B534 C143 | 9.01 | 1.69 | Protein of unknown function | 845 | 2867 | |
THC0290_0506 | CDS | 613962:614243 + | A1415 B488 C140 | 8.70 | 7.60 | Protein of unknown function | 847 | 2590 | |
THC0290_0507 | gene | 614341:614829 + | A1415 B488 C140 | 7.08 | 5.93 | Truncated protein of unknown function, N-terminal region | 848 | 2591 | |
THC0290_N_0367 | repeated_region | 614486:614829 - | A1768 B546 C143 | 6.67 | 4.24 | new transcription segment | 849 | 3600 | |
THC0290_0509 | gene | 616003:617439 + | A1253 B419 C125 | 6.48 | 1.48 | Truncated protein of unknown function, C-terminal region | 852 | 2376 | |
THC0290_0514 | CDS | 629601:630056 + | A364 B138 C39 | 7.43 | -1.21 | Protein of unknown function | 858 | 466 | |
THC0290_0515 | CDS | 630235:632664 + | A363 B138 C39 | 8.54 | -1.51 | Protein of unknown function | 860 | 464 | |
THC0290_N_0372 | repeated_region | 633986:634186 - | A1765 B546 C143 | 10.18 | 4.82 | new transcription segment | 863 | 3515 | |
THC0290_0517 | CDS | 634225:634386 - | A1765 B546 C143 | 10.76 | 5.83 | Hypothetical protein | 864 | 3514 | |
THC0290_N_0373 | intra | 634387:634452 - | A1765 B546 C143 | 13.26 | 5.28 | new transcription segment | 865 | 3513 | |
THC0290_0518 | CDS | 634453:634626 - | A1765 B546 C143 | 12.57 | 5.28 | Conserved protein of unknown function | 866 | 3512 | |
THC0290_N_0374 | intra | 634627:634806 - | A1765 B546 C143 | 11.65 | 6.17 | new transcription segment | 867 | 3511 | |
THC0290_0519 | CDS | 634807:635154 - | A1765 B546 C143 | 12.02 | 2.85 | Conserved protein of unknown function | 869 | 3504 | |
THC0290_0520 | CDS | 635151:635951 - | A1765 B546 C143 | 12.03 | 3.61 | Probable transcriptional regulator | 870 | 3505 | |
THC0290_N_0377 | repeated_region | 641242:642097 - | A1252 B419 C125 | 10.05 | 1.73 | new transcription segment | 877 | 2368 | |
THC0290_0526 | CDS | 642217:643776 + | A1765 B546 C143 | 9.23 | 2.54 | Transposase IS1182 family | 878 | 3529 | |
THC0290_N_0378 | repeated_region | 645071:645304 + | A1686 B545 C143 | 8.50 | 1.60 | new transcription segment | 880 | 3092 | |
THC0290_N_0387 | 5prime | 655005:655084 - | A1765 B546 C143 | 13.44 | 1.54 | new transcription segment | 899 | 3548 | |
THC0290_N_0388 | repeated_region | 655785:656570 - | A1252 B419 C125 | 9.68 | 1.56 | new transcription segment | 901 | 2367 | |
THC0290_0539 | CDS | 656571:656978 - | A1675 B543 C143 | 11.83 | 1.16 | Hypothetical protein | 902 | 3078 | |
THC0290_0540 | CDS | 656981:657529 - | A1760 B546 C143 | 12.98 | 2.03 | Hypothetical protein | 903 | 3377 | |
THC0290_N_0390 | Rfp30 | indep | 658610:658815 + | A1762 B546 C143 | 12.14 | 3.86 | new transcription segment | 906 | 3412 |
THC0290_0543 | CDS | 660017:661417 - | A1252 B419 C125 | 8.18 | 2.62 | Hypothetical protein | 910 | 2373 | |
THC0290_N_0393 | repeated_region | 661643:662054 - | A1766 B546 C143 | 12.25 | 1.05 | new transcription segment | 911 | 3563 | |
THC0290_N_0394 | repeated_region | 661670:662043 + | A1749 B546 C143 | 8.51 | 2.69 | new transcription segment | 912 | 3323 | |
THC0290_0546 | CDS | 664709:665848 - | A1253 B419 C125 | 5.19 | 1.20 | Restriction endonuclease | 915 | 2377 | |
THC0290_0547 | gene | 665845:666240 - | A1731 B546 C143 | 6.60 | 1.90 | Truncated cytosine-specific modification methyltransferase, C-terminal region | 916 | 3200 | |
THC0290_N_0395 | repeated_region | 666241:666640 - | A1768 B546 C143 | 8.58 | 1.31 | new transcription segment | 917 | 3576 | |
THC0290_0549 | gene | 667418:668239 - | A1768 B546 C143 | 11.42 | 1.49 | Truncated cytosine-specific modification methyltransferase, N-terminal region | 920 | 3579 | |
THC0290_N_0396 | intra | 668261:668748 - | A1765 B546 C143 | 8.63 | 2.14 | new transcription segment | 921 | 3545 | |
THC0290_0550 | CDS | 668749:669369 - | A1765 B546 C143 | 10.27 | 1.08 | Protein of unknown function | 922 | 3546 | |
THC0290_N_0397 | repeated_region | 669370:670142 - | A1765 B546 C143 | 8.93 | 1.60 | new transcription segment | 923 | 3523 | |
THC0290_N_0398 | 5prime | 673140:674020 - | A1765 B546 C143 | 10.48 | 1.35 | new transcription segment | 925 | 3547 | |
THC0290_0556 | CDS | 678342:679628 - | A1356 B468 C136 | 9.33 | 1.65 | Probable type II modification methyltransferase Sau3AI | 932 | 2515 | |
THC0290_0557 | CDS | 679618:679926 - | A1356 B468 C136 | 9.93 | 2.25 | Putative DNA binding protein | 933 | 2516 | |
THC0290_0561 | CDS | 682255:683376 - | A1765 B546 C143 | 9.09 | 1.20 | Hypothetical protein | 940 | 3471 | |
THC0290_N_0404 | repeated_region | 683377:684734 - | A1252 B419 C125 | 9.88 | 1.40 | new transcription segment | 941 | 2369 | |
THC0290_N_0410 | repeated_region | 693406:693624 - | A842 B255 C69 | 9.72 | -1.79 | new transcription segment | 954 | 1760 | |
THC0290_0569 | CDS | 693625:694329 - | A842 B255 C69 | 9.95 | -2.41 | Protein of unknown function | 955 | 1759 | |
THC0290_0570 | CDS | 694331:695638 - | A1206 B415 C124 | 10.74 | -1.34 | Protein of unknown function | 956 | 2262 | |
THC0290_N_0412 | repeated_region | 696397:696658 - | A1768 B546 C143 | 10.06 | 1.52 | new transcription segment | 959 | 3592 | |
THC0290_N_0415 | repeated_region | 698501:698961 - | A1765 B546 C143 | 11.88 | 1.59 | new transcription segment | 964 | 3454 | |
THC0290_0574 | CDS | 698962:700197 - | A1191 B409 C123 | 10.49 | 1.24 | Major facilitator superfamily (MFS) permease | 965 | 2231 | |
THC0290_N_0416 | intra | 700198:700330 - | A1697 B546 C143 | 11.02 | 1.98 | new transcription segment | 966 | 3109 | |
THC0290_0577 | CDS | 702287:703369 - | A600 B183 C44 | 11.28 | -1.57 | Protein of unknown function | 971 | 1084 | |
THC0290_0581 | CDS | 707782:708492 + | A1765 B546 C143 | 10.95 | 2.25 | Protein of unknown function | 979 | 3501 | |
THC0290_N_0424 | 3prime | 708493:708688 + | A1645 B540 C143 | 9.13 | 2.42 | new transcription segment | 982 | 2997 | |
THC0290_N_0425 | 3prime-PT | 708689:709190 + | A1645 B540 C143 | 8.41 | 2.64 | new transcription segment | 983 | 2998 | |
THC0290_tRNA_0012 | tRNA | 710904:710976 + | A1769 B546 C143 | 13.48 | 2.81 | transfer RNA-Gly | 987 | 3777 | |
THC0290_0585 | CDS | 711836:712555 + | A1348 B467 C136 | 8.42 | 2.66 | Protein of unknown function precursor | 989 | 2501 | |
THC0290_0586 | CDS | 712569:713072 + | A1347 B467 C136 | 8.37 | 1.12 | Protein of unknown function | 990 | 2498 | |
THC0290_0587 | CDS | 713131:715374 + | A1446 B502 C142 | 11.60 | 1.21 | Probable M1 family aminopeptidase precursor | 991 | 2632 | |
THC0290_0593 | sprA | CDS | 722225:729463 + | A663 B187 C46 | 10.07 | -1.02 | Putative adhesin precursor SprA | 1000 | 1437 |
THC0290_N_0433 | intra | 729464:729774 + | A664 B187 C46 | 8.91 | -1.66 | new transcription segment | 1001 | 1438 | |
THC0290_0594 | CDS | 729775:729990 + | A599 B183 C44 | 9.13 | -1.97 | Conserved protein of unknown function | 1002 | 1021 | |
THC0290_N_0434 | 3prime | 729991:730208 + | A601 B183 C44 | 10.87 | -2.10 | new transcription segment | 1003 | 1129 | |
THC0290_N_0435 | intra | 730209:730951 + | A318 B119 C33 | 9.87 | -1.56 | new transcription segment | 1004 | 404 | |
THC0290_N_0436 | intra | 731354:731426 + | A600 B183 C44 | 12.85 | -1.35 | new transcription segment | 1006 | 1047 | |
THC0290_0596 | fjo27 | CDS | 731427:731732 + | A600 B183 C44 | 13.41 | -1.10 | Conserved membrane protein of unknown function | 1007 | 1046 |
THC0290_N_0438 | repeated_region | 734673:735247 + | A1842 B563 C145 | 9.03 | 3.53 | new transcription segment | 1011 | 3938 | |
THC0290_0600 | CDS | 736346:737788 - | A1412 B488 C140 | 12.12 | 2.69 | Probable outer membrane efflux protein precursor | 1013 | 2587 | |
THC0290_0601 | CDS | 737937:739331 + | A1699 B546 C143 | 9.29 | 1.20 | Probable lipoprotein precursor | 1014 | 3114 | |
THC0290_N_0441 | 3prime | 739332:739567 + | A1420 B491 C140 | 9.37 | 1.85 | new transcription segment | 1017 | 2602 | |
THC0290_N_0444 | 3prime | 745438:745510 - | A1762 B546 C143 | 15.50 | 1.92 | new transcription segment | 1028 | 3393 | |
THC0290_0611 | CDS | 745511:745864 - | A1762 B546 C143 | 14.12 | 2.27 | Protein of unknown function | 1029 | 3392 | |
THC0290_0615 | CDS | 750566:751084 + | A1407 B485 C140 | 10.90 | 1.09 | Carbonic anhydrase/acetyltransferase family protein | 1036 | 2581 | |
THC0290_N_0447 | 3prime | 751085:752281 + | A1248 B419 C125 | 8.88 | 1.89 | new transcription segment | 1037 | 2361 | |
THC0290_0621 | CDS | 757252:757935 - | A1353 B467 C136 | 10.60 | 1.42 | Protein of unknown function precursor, putative outer membrane protein | 1045 | 2512 | |
THC0290_N_0450 | Rfp31 | indep | 757950:758024 - | A1751 B546 C143 | 10.02 | 2.83 | new transcription segment | 1046 | 3333 |
THC0290_N_0453 | 3prime | 760731:761017 + | A1765 B546 C143 | 9.45 | 1.42 | new transcription segment | 1052 | 3472 | |
THC0290_0629 | tig | CDS | 763697:765022 + | A599 B183 C44 | 12.73 | -1.48 | Trigger factor (TF) | 1060 | 1002 |
THC0290_N_0459 | intra | 765967:766041 + | A457 B168 C44 | 10.49 | -1.21 | new transcription segment | 1064 | 594 | |
THC0290_0631 | clpX | CDS | 766042:767274 + | A601 B183 C44 | 12.29 | -1.40 | S14 family, ATP-dependent Clp protease ATP-binding subunit | 1065 | 1152 |
THC0290_N_0460 | Rfp32 | indep | 767146:767422 - | A1768 B546 C143 | 7.84 | 2.98 | new transcription segment | 1066 | 3682 |
THC0290_0632 | CDS | 767506:767874 + | A1745 B546 C143 | 11.77 | 1.49 | Putative Sec-independent protein translocase (twin-arginine translocation protein) | 1068 | 3239 | |
THC0290_N_0462 | 3prime | 768085:768500 - | A1646 B540 C143 | 7.33 | 1.32 | new transcription segment | 1070 | 3003 | |
THC0290_N_0465 | intra | 770297:771152 + | A1715 B546 C143 | 8.48 | 4.27 | new transcription segment | 1075 | 3159 | |
THC0290_0636 | CDS | 770321:771202 - | A1765 B546 C143 | 11.80 | 4.99 | Probable lipoprotein precursor | 1076 | 3493 | |
THC0290_0638 | CDS | 772469:773029 + | A1710 B546 C143 | 9.01 | 2.58 | RNA polymerase ECF-type sigma factor | 1078 | 3144 | |
THC0290_0639 | CDS | 773016:773693 + | A1710 B546 C143 | 9.07 | 2.69 | Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor | 1079 | 3145 | |
THC0290_0640 | CDS | 773726:774790 + | A1783 B548 C143 | 9.55 | 1.16 | Protein of unknown function precursor, putative sensor of anti-sigma and ECF sigma factor | 1080 | 3832 | |
THC0290_0642 | CDS | 776332:777606 + | A1767 B546 C143 | 8.45 | 3.04 | Protein of unknown function precursor | 1082 | 3568 | |
THC0290_N_0467 | 3prime | 779421:779788 - | A1768 B546 C143 | 9.14 | 3.90 | new transcription segment | 1085 | 3729 | |
THC0290_N_0468 | 3prime | 779749:779897 + | A760 B225 C62 | 8.36 | 1.29 | new transcription segment | 1086 | 1634 | |
THC0290_0644 | CDS | 779789:780418 - | A1768 B546 C143 | 11.56 | 4.48 | Two-component system response regulatory protein, LuxR family | 1087 | 3728 | |
THC0290_N_0470 | 5prime | 781374:781453 + | A1767 B546 C143 | 10.00 | 2.05 | new transcription segment | 1091 | 3571 | |
THC0290_N_0472 | 3prime | 782817:782865 + | A1354 B468 C136 | 5.90 | 1.08 | new transcription segment | 1095 | 2513 | |
THC0290_0650 | mraZ | CDS | 784611:785084 + | A1711 B546 C143 | 11.71 | 1.72 | Protein MraZ | 1099 | 3149 |
THC0290_0651 | mraW | CDS | 785092:785967 + | A1711 B546 C143 | 11.46 | 1.56 | S-adenosyl-methyltransferase MraW | 1100 | 3147 |
THC0290_0652 | CDS | 785967:786308 + | A1192 B409 C123 | 10.84 | 1.63 | Probable transmembrane protein of unknown function | 1101 | 2232 | |
THC0290_0653 | ftsI | CDS | 786299:788302 + | A1192 B409 C123 | 10.88 | 1.29 | Peptidoglycan glycosyltransferase FtsI | 1102 | 2233 |
THC0290_N_0484 | 3prime | 802212:803155 + | A1248 B419 C125 | 7.55 | 1.72 | new transcription segment | 1125 | 2359 | |
THC0290_N_0485 | 3prime | 803148:803240 - | A1242 B419 C125 | 9.11 | 2.05 | new transcription segment | 1127 | 2320 | |
THC0290_N_0486 | Rfp35 | indep | 803241:803318 - | A1641 B540 C143 | 12.38 | 3.93 | new transcription segment | 1128 | 2980 |
THC0290_0666 | rpoD | CDS | 803319:804182 - | A1641 B540 C143 | 13.55 | 2.64 | RNA polymerase sigma-70 factor RpoD | 1129 | 2979 |
THC0290_N_0487 | 3prime | 804893:804980 - | A942 B298 C82 | 5.81 | 2.07 | new transcription segment | 1131 | 1881 | |
THC0290_0670 | CDS | 807710:809137 - | A1762 B546 C143 | 10.27 | 1.04 | Probable nucleoside-diphosphate-sugar epimerase | 1135 | 3400 | |
THC0290_0671 | phrB3 | CDS | 809155:810447 - | A1742 B546 C143 | 8.49 | 1.78 | Deoxyribodipyrimidine photolyase PhrB3 | 1136 | 3225 |
THC0290_0672 | CDS | 810444:812006 - | A1742 B546 C143 | 8.27 | 1.62 | Protein of unknown function related to deoxyribodipyrimidine photolyase | 1137 | 3226 | |
THC0290_N_0492 | intra | 812007:812083 - | A1747 B546 C143 | 9.70 | 2.93 | new transcription segment | 1138 | 3270 | |
THC0290_0673 | phrB2 | CDS | 812084:813592 - | A1763 B546 C143 | 9.30 | 2.78 | Deoxyribodipyrimidine photolyase PhrB2 | 1139 | 3439 |
THC0290_0674 | CDS | 813604:814233 - | A1763 B546 C143 | 9.95 | 2.83 | Protein of unknown function | 1140 | 3440 | |
THC0290_0675 | CDS | 814274:814693 - | A1763 B546 C143 | 10.26 | 3.38 | Protein of unknown function | 1141 | 3443 | |
THC0290_0676 | CDS | 814714:815004 - | A1763 B546 C143 | 10.57 | 3.25 | Protein of unknown function | 1142 | 3444 | |
THC0290_0678 | CDS | 815673:816212 + | A1694 B546 C143 | 8.28 | 1.35 | Probable transmembrane protein of unknown function | 1144 | 3104 | |
THC0290_0680 | CDS | 816720:817085 + | A1768 B546 C143 | 10.28 | 2.56 | Protein of unknown function | 1146 | 3721 | |
THC0290_N_0495 | intra | 817086:817137 + | A1674 B543 C143 | 10.18 | 4.76 | new transcription segment | 1147 | 3072 | |
THC0290_0681 | CDS | 817138:819144 + | A1674 B543 C143 | 12.11 | 4.99 | Probable TonB-dependent outer membrane receptor precursor | 1148 | 3071 | |
THC0290_0682 | CDS | 819184:819525 + | A1674 B543 C143 | 12.77 | 4.41 | Protein of unknown function | 1149 | 3069 | |
THC0290_0683 | CDS | 819616:819906 + | A1674 B543 C143 | 13.62 | 2.13 | Hypothetical protein | 1150 | 3070 | |
THC0290_N_0497 | intra | 819907:819970 + | A1674 B543 C143 | 10.87 | 4.78 | new transcription segment | 1151 | 3075 | |
THC0290_0684 | sulP | CDS | 819971:821572 + | A1674 B543 C143 | 12.88 | 4.93 | Probable sulfate permease | 1152 | 3076 |
THC0290_0685 | cynT | CDS | 821595:822230 + | A1674 B543 C143 | 13.43 | 4.08 | Carbonic anhydrase | 1153 | 3077 |
THC0290_N_0498 | 3prime | 822231:822315 + | A1674 B543 C143 | 9.68 | 3.11 | new transcription segment | 1154 | 3073 | |
THC0290_0686 | CDS | 822316:823008 + | A1674 B543 C143 | 11.06 | 1.67 | Transmembrane protein of unknown function, DedA family | 1155 | 3074 | |
THC0290_0688 | CDS | 823730:824341 - | A1449 B502 C142 | 11.14 | 1.60 | Probable hydrolase (HAD superfamily) | 1157 | 2639 | |
THC0290_N_0500 | 3prime | 826538:826787 - | A1169 B401 C121 | 8.78 | 2.76 | new transcription segment | 1161 | 2204 | |
THC0290_0692 | CDS | 826788:828029 - | A1747 B546 C143 | 9.92 | 1.97 | Probable ABC-type transport system, permease component | 1162 | 3294 | |
THC0290_N_0510 | Rfp36 | indep | 840044:840245 - | A1244 B419 C125 | 8.96 | 1.60 | new transcription segment | 1183 | 2343 |
THC0290_0703 | CDS | 840392:840925 + | A540 B180 C44 | 9.77 | -1.03 | Protein of unknown function | 1184 | 751 | |
THC0290_0707 | CDS | 844456:845016 + | A1762 B546 C143 | 13.40 | 2.31 | Putative transcriptional regulator | 1190 | 3410 | |
THC0290_N_0516 | 3prime | 844739:845012 - | A1684 B545 C143 | 8.55 | 4.43 | new transcription segment | 1191 | 3087 | |
THC0290_N_0517 | 3prime | 845017:845453 + | A1643 B540 C143 | 8.85 | 3.38 | new transcription segment | 1193 | 2986 | |
THC0290_N_0519 | 3prime | 846486:846777 - | A595 B183 C44 | 11.27 | -2.57 | new transcription segment | 1196 | 956 | |
THC0290_0710 | ribH | CDS | 846778:847347 - | A600 B183 C44 | 11.47 | -1.47 | Riboflavin synthase, beta subunit | 1198 | 1103 |
THC0290_N_0521 | intra | 847348:847417 - | A454 B168 C44 | 9.85 | -1.91 | new transcription segment | 1199 | 589 | |
THC0290_0711 | CDS | 847418:848209 - | A600 B183 C44 | 12.49 | -1.05 | Protein of unknown function | 1200 | 1104 | |
THC0290_0715 | remC | CDS | 850979:852040 + | A617 B183 C44 | 10.77 | -1.20 | RemC, Candidate alpha-glycosyltransferase, Glycosyltransferase family 4 | 1204 | 1316 |
THC0290_0716 | asnB | CDS | 852044:853891 + | A617 B183 C44 | 10.30 | -1.01 | Asparagine synthetase [glutamine-hydrolyzing] | 1205 | 1315 |
THC0290_0718 | CDS | 855109:855891 + | A557 B183 C44 | 8.84 | -1.18 | Probable ABC-type iron(III)-transport system, ATPase component | 1209 | 813 | |
THC0290_N_0524 | 3prime | 855197:855910 - | A1376 B472 C137 | 7.64 | 1.28 | new transcription segment | 1210 | 2544 | |
THC0290_0724 | irk | CDS | 859337:860293 - | A1604 B535 C143 | 8.80 | 1.23 | Inward rectifier potassium channel Irk | 1217 | 2888 |
THC0290_0728 | groL | CDS | 864839:866467 - | A840 B254 C69 | 13.08 | -1.39 | 60 kDa chaperonin GroEL | 1225 | 1749 |
THC0290_N_0530 | intra | 866468:866905 - | A840 B254 C69 | 12.98 | -2.10 | new transcription segment | 1226 | 1751 | |
THC0290_0729 | groS | CDS | 866906:867181 - | A840 B254 C69 | 12.65 | -1.91 | 10 kDa chaperonin GroES | 1227 | 1750 |
THC0290_N_0531 | 3prime | 867274:867320 - | A391 B149 C42 | 8.67 | 1.16 | new transcription segment | 1228 | 501 | |
THC0290_N_0536 | 3prime | 872624:872743 - | A1802 B553 C144 | 7.18 | 1.63 | new transcription segment | 1238 | 3889 | |
THC0290_0735 | remH | CDS | 872744:873166 - | A256 B91 C27 | 12.84 | -1.40 | Gliding motility protein RemH precursor | 1239 | 334 |
THC0290_0736 | CDS | 873196:873774 - | A256 B91 C27 | 12.42 | -1.03 | Protein of unknown function precursor | 1240 | 335 | |
THC0290_N_0542 | 3prime | 883959:884947 - | A1246 B419 C125 | 8.09 | 1.79 | new transcription segment | 1252 | 2352 | |
THC0290_0745 | CDS | 884948:885376 - | A1768 B546 C143 | 11.46 | 1.56 | Protein of unknown function | 1254 | 3679 | |
THC0290_N_0548 | 3prime | 890506:891130 + | A1218 B416 C125 | 7.54 | 1.31 | new transcription segment | 1264 | 2284 | |
THC0290_0752 | engA | CDS | 894154:895464 + | A971 B307 C84 | 12.23 | 1.16 | GTP-binding protein EngA | 1275 | 1920 |
THC0290_0762 | CDS | 908244:908816 - | A595 B183 C44 | 13.25 | -1.32 | Protein of unknown function | 1294 | 955 | |
THC0290_N_0563 | 3prime | 910894:911072 + | A1685 B545 C143 | 9.35 | 1.64 | new transcription segment | 1297 | 3089 | |
THC0290_N_0564 | Rfp39 | indep | 913998:914265 + | A1768 B546 C143 | 7.23 | 2.07 | new transcription segment | 1301 | 3685 |
THC0290_0770 | CDS | 916301:916633 - | A1409 B486 C140 | 10.87 | 1.16 | Probable transcriptional regulator, MerR family | 1308 | 2583 | |
THC0290_0771 | CDS | 916633:917610 - | A1765 B546 C143 | 10.80 | 1.44 | Transmembrane peptidase, M23B family | 1309 | 3549 | |
THC0290_0775 | CDS | 926006:926245 + | A1768 B546 C143 | 10.84 | 1.67 | Hypothetical protein | 1317 | 3661 | |
THC0290_0777 | CDS | 926970:927692 + | A1244 B419 C125 | 11.07 | 2.11 | Protein of unknown function precursor | 1320 | 2345 | |
THC0290_N_0573 | Rfp40 | indep | 927787:927860 + | A1768 B546 C143 | 8.64 | 5.03 | new transcription segment | 1321 | 3602 |
THC0290_0779 | CDS | 928488:929126 + | A1765 B546 C143 | 9.23 | 1.92 | Probable pyrophosphohydrolase | 1324 | 3550 | |
THC0290_N_0575 | 3prime | 929531:929992 - | A1226 B417 C125 | 7.97 | 2.33 | new transcription segment | 1326 | 2297 | |
THC0290_0781 | CDS | 929993:930601 - | A1232 B419 C125 | 9.16 | 2.33 | Probable transmembrane protein of unknown function, putative anti ECF-type sigma factor | 1327 | 2305 | |
THC0290_0782 | CDS | 930615:931109 - | A1696 B546 C143 | 10.22 | 3.01 | RNA polymerase ECF-type sigma factor | 1328 | 3106 | |
THC0290_0784 | CDS | 932625:933680 - | A1768 B546 C143 | 8.43 | 1.14 | Probable transmembrane protein of unknown function | 1331 | 3664 | |
THC0290_N_0577 | 3prime | 935730:935797 - | A1650 B542 C143 | 8.32 | 1.63 | new transcription segment | 1334 | 3011 | |
THC0290_0788 | CDS | 938186:938767 + | A1795 B549 C143 | 11.63 | 2.58 | Protein of unknown function precursor | 1337 | 3853 | |
THC0290_N_0578 | intra | 938768:938895 + | A1765 B546 C143 | 8.63 | 2.38 | new transcription segment | 1338 | 3482 | |
THC0290_0789 | CDS | 938927:940153 + | A578 B183 C44 | 11.67 | -1.25 | Glu/Leu/Phe/Val dehydrogenase family protein | 1339 | 865 | |
THC0290_N_0579 | 5prime | 940174:940237 + | A578 B183 C44 | 12.24 | -1.63 | new transcription segment | 1340 | 867 | |
THC0290_0790 | CDS | 940238:940999 + | A578 B183 C44 | 10.91 | -1.89 | Hypothetical protein | 1341 | 866 | |
THC0290_N_0580 | intra | 941000:941283 + | A667 B187 C46 | 11.32 | -1.48 | new transcription segment | 1342 | 1441 | |
THC0290_0793 | CDS | 943571:944119 - | A1088 B365 C107 | 10.15 | -3.20 | Probable transmembrane protein of unknown function | 1347 | 2094 | |
THC0290_0794 | fhuA | CDS | 944125:946380 - | A1088 B365 C107 | 10.97 | -3.48 | Probable TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA | 1348 | 2095 |
THC0290_0796 | CDS | 948326:950458 + | A639 B183 C44 | 11.89 | -1.37 | Probable outer membrane protein precursor, OmpA family | 1352 | 1389 | |
THC0290_N_0586 | 3prime | 952367:952448 - | A320 B120 C33 | 8.88 | -1.15 | new transcription segment | 1356 | 407 | |
THC0290_0798 | CDS | 952449:953249 - | A529 B180 C44 | 7.63 | -1.10 | Hypothetical protein | 1357 | 717 | |
THC0290_0800 | CDS | 954369:955730 - | A233 B83 C25 | 9.81 | -1.05 | Probable DNA polymerase III subunit | 1361 | 306 | |
THC0290_N_0589 | intra | 955731:955842 - | A650 B183 C44 | 8.68 | -1.47 | new transcription segment | 1363 | 1420 | |
THC0290_0802 | CDS | 956244:956903 - | A601 B183 C44 | 9.54 | -1.10 | Protein of unknown function | 1365 | 1147 | |
THC0290_N_0590 | intra | 956904:956987 - | A368 B140 C39 | 8.05 | -1.52 | new transcription segment | 1366 | 470 | |
THC0290_N_0592 | 3prime | 962079:962138 + | A1190 B409 C123 | 8.51 | 2.56 | new transcription segment | 1373 | 2230 | |
THC0290_N_0593 | 3prime | 965318:965499 - | A1747 B546 C143 | 8.68 | 2.33 | new transcription segment | 1376 | 3273 | |
THC0290_0812 | fur | CDS | 967831:968283 + | A1764 B546 C143 | 11.64 | 1.03 | Ferric iron uptake transcription regulator, Fur | 1382 | 3449 |
THC0290_0815 | oxaA | CDS | 970617:972518 - | A800 B244 C67 | 10.71 | -1.74 | Inner membrane protein OxaA | 1386 | 1690 |
THC0290_N_0599 | intra | 972519:972611 - | A800 B244 C67 | 10.34 | -1.06 | new transcription segment | 1387 | 1689 | |
THC0290_0817 | CDS | 974932:975162 - | A674 B189 C46 | 10.87 | -1.65 | Protein of unknown function | 1389 | 1454 | |
THC0290_N_0600 | intra | 975163:975241 - | A674 B189 C46 | 9.23 | -1.98 | new transcription segment | 1390 | 1453 | |
THC0290_0818 | osmC | CDS | 975242:975646 - | A674 B189 C46 | 10.49 | -1.02 | Putative stress-induced protein OsmC | 1391 | 1455 |
THC0290_N_0601 | Rfp42 | indep | 976566:976680 + | A1248 B419 C125 | 7.13 | 2.31 | new transcription segment | 1393 | 2355 |
THC0290_N_0602 | intra | 977563:977781 - | A1244 B419 C125 | 9.81 | 1.14 | new transcription segment | 1394 | 2344 | |
THC0290_N_0603 | 3prime | 979489:979622 - | A979 B309 C84 | 7.30 | 1.08 | new transcription segment | 1396 | 1931 | |
THC0290_0824 | ppiA | CDS | 982856:983950 + | A601 B183 C44 | 12.43 | -1.29 | Probable peptidyl-prolyl cis-trans isomerase precursor PpiA | 1400 | 1177 |
THC0290_0825 | ppiB | CDS | 983971:985056 + | A601 B183 C44 | 12.24 | -1.53 | Probable peptidyl-prolyl cis-trans isomerase precursor PpiB | 1401 | 1178 |
THC0290_0828 | CDS | 988051:988332 - | A1762 B546 C143 | 13.80 | 2.42 | Protein of unknown function | 1405 | 3391 | |
THC0290_0829 | CDS | 988595:989146 + | A1762 B546 C143 | 11.68 | 1.57 | Probable ribosomal-protein-amino-adic N-acetyltransferase | 1406 | 3411 | |
THC0290_0832 | dcp2 | CDS | 990238:992370 - | A1796 B549 C143 | 10.05 | 1.73 | Peptidyl-dipeptidase precursor Dcp2 | 1410 | 3876 |
THC0290_N_0617 | 3prime | 1004055:1004461 + | A1178 B404 C122 | 8.47 | 1.90 | new transcription segment | 1429 | 2215 | |
THC0290_0845 | CDS | 1006516:1006935 + | A1765 B546 C143 | 10.36 | 1.07 | Protein of unknown function | 1432 | 3502 | |
THC0290_0849 | CDS | 1009303:1009518 - | A501 B175 C44 | 6.55 | -1.67 | Hypothetical transmembrane protein | 1437 | 669 | |
THC0290_N_0619 | Rfp43 | indep | 1009763:1009899 + | A1839 B563 C145 | 5.70 | 2.10 | new transcription segment | 1439 | 3933 |
THC0290_0853 | yfkH | CDS | 1012228:1013175 + | A601 B183 C44 | 9.81 | -1.20 | Protein of unknown function YfkH | 1442 | 1168 |
THC0290_N_0620 | intra | 1013601:1014074 + | A625 B183 C44 | 10.55 | -1.59 | new transcription segment | 1444 | 1343 | |
THC0290_0855 | priA | CDS | 1014075:1016525 + | A611 B183 C44 | 10.09 | -1.40 | Primosomal protein N' | 1445 | 1286 |
THC0290_N_0621 | 3prime | 1016422:1016591 - | A1765 B546 C143 | 12.96 | 1.48 | new transcription segment | 1446 | 3553 | |
THC0290_0856 | CDS | 1016592:1017284 - | A1762 B546 C143 | 12.54 | 2.02 | Two-component system response regulatory protein, LytTR family | 1448 | 3418 | |
THC0290_0857 | rpsF | CDS | 1017453:1017794 + | A542 B180 C44 | 13.59 | -1.30 | 30S ribosomal protein S6 | 1449 | 760 |
THC0290_0858 | rpsR | CDS | 1017800:1018096 + | A542 B180 C44 | 14.55 | -1.64 | 30S ribosomal protein S18 | 1450 | 761 |
THC0290_N_0623 | intra | 1018097:1018161 + | A542 B180 C44 | 16.30 | -1.28 | new transcription segment | 1451 | 759 | |
THC0290_N_0625 | intra | 1018645:1018746 + | A810 B244 C67 | 6.21 | -3.47 | new transcription segment | 1453 | 1709 | |
THC0290_0860 | CDS | 1018747:1019220 + | A586 B183 C44 | 8.33 | -1.41 | Protein of unknown function | 1454 | 912 | |
THC0290_N_0629 | intra | 1024365:1024417 - | A451 B168 C44 | 9.50 | -1.46 | new transcription segment | 1463 | 584 | |
THC0290_0867 | recN | CDS | 1024418:1026070 - | A645 B183 C44 | 10.84 | -1.33 | DNA repair protein recN | 1464 | 1403 |
THC0290_0869 | coaBC | CDS | 1026960:1028168 - | A645 B183 C44 | 10.63 | -1.50 | Bifunctional protein CoaBC : Phosphopantothenoylcysteine decarboxylase and Phosphopantothenate--cysteine ligase | 1466 | 1402 |
THC0290_0871 | bamD | CDS | 1028500:1029294 - | A641 B183 C44 | 11.82 | -1.04 | Outer membrane assembly lipoprotein precursor BamD | 1468 | 1395 |
THC0290_0873 | CDS | 1030281:1030799 - | A1751 B546 C143 | 11.80 | 1.45 | Protein of unknown function | 1471 | 3337 | |
THC0290_0876 | gene | 1033238:1033369 - | A1768 B546 C143 | 8.53 | 1.96 | protein of unknown function (fragment) | 1476 | 3691 | |
THC0290_0877 | gene | 1033435:1033563 - | A1747 B546 C143 | 8.29 | 1.64 | Cytosine-specific methyltransferase (fragment) | 1477 | 3272 | |
THC0290_0878 | CDS | 1034261:1036504 + | A1796 B549 C143 | 9.97 | 5.57 | Protein of unknown function precursor, putative adhesin | 1478 | 3881 | |
THC0290_N_0633 | intra | 1038177:1038243 + | A1765 B546 C143 | 8.65 | 1.56 | new transcription segment | 1481 | 3561 | |
THC0290_0881 | rprX | CDS | 1038245:1039828 + | A1765 B546 C143 | 10.81 | 1.92 | Two-component system sensor histidine kinase RprX | 1482 | 3521 |
THC0290_0882 | rprY | CDS | 1039832:1040533 + | A1765 B546 C143 | 12.89 | 1.74 | Two-component system response regulatory protein RprY | 1483 | 3516 |
THC0290_0883 | ytxJ | CDS | 1040596:1040982 + | A1644 B540 C143 | 9.49 | 2.21 | Protein of unknown function YtxJ | 1485 | 2993 |
THC0290_N_0635 | 3prime | 1040983:1041081 + | A1644 B540 C143 | 8.90 | 2.42 | new transcription segment | 1486 | 2994 | |
THC0290_0884 | CDS | 1041028:1041660 - | A1749 B546 C143 | 9.29 | 1.05 | Hypothetical lipoprotein precursor | 1487 | 3318 | |
THC0290_0885 | CDS | 1041714:1042898 - | A1243 B419 C125 | 10.61 | 1.10 | Probable lipoprotein precursor | 1489 | 2321 | |
THC0290_N_0638 | intra | 1048143:1048274 + | A380 B145 C41 | 9.98 | -1.10 | new transcription segment | 1496 | 488 | |
THC0290_0891 | CDS | 1048948:1050882 + | A967 B307 C84 | 11.29 | 1.07 | Probable ATP-dependent RNA helicase, DEAD/DEAH box family | 1499 | 1911 | |
THC0290_N_0640 | 3prime | 1050883:1050942 + | A969 B307 C84 | 7.12 | 2.68 | new transcription segment | 1500 | 1914 | |
THC0290_0893 | CDS | 1052483:1053235 + | A1753 B546 C143 | 10.86 | 3.08 | Protein of unknown function precursor | 1503 | 3355 | |
THC0290_0894 | (yfcA) | CDS | 1053252:1054037 + | A1753 B546 C143 | 11.06 | 2.01 | Probable transmembrane protein of unknown function | 1504 | 3347 |
THC0290_N_0642 | intra | 1054038:1054100 + | A1753 B546 C143 | 9.95 | 1.94 | new transcription segment | 1505 | 3348 | |
THC0290_0910 | CDS | 1070654:1073071 + | A623 B183 C44 | 10.36 | -1.01 | Protein of unknown function | 1529 | 1336 | |
THC0290_0911 | crcB | CDS | 1073072:1073446 + | A629 B183 C44 | 10.47 | -1.28 | Protein of unknown function CrcB | 1530 | 1353 |
THC0290_0912 | CDS | 1073443:1074720 + | A601 B183 C44 | 9.24 | -1.82 | Glycosyl transferase, group 1 family protein | 1531 | 1137 | |
THC0290_0920 | manA | CDS | 1080590:1081558 + | A605 B183 C44 | 11.09 | -1.40 | Mannose-6-phosphate isomerase | 1545 | 1234 |
THC0290_tRNA_0017 | tRNA | 1081988:1082061 + | A1769 B546 C143 | 13.51 | 3.74 | transfer RNA-Thr | 1548 | 3766 | |
THC0290_0923 | CDS | 1082679:1084841 + | A207 B76 C24 | 8.06 | -2.64 | Probable TonB-dependent outer membrane receptor precursor | 1550 | 265 | |
THC0290_N_0656 | intra | 1084910:1084987 + | A207 B76 C24 | 6.94 | -4.37 | new transcription segment | 1551 | 264 | |
THC0290_0924 | CDS | 1084988:1086520 + | A207 B76 C24 | 7.89 | -2.87 | Probable transmembrane protein of unknown function | 1552 | 266 | |
THC0290_N_0657 | intra | 1087045:1087158 + | A1085 B365 C107 | 11.45 | -1.10 | new transcription segment | 1554 | 2076 | |
THC0290_0926 | ftnA | CDS | 1087175:1087702 + | A1414 B488 C140 | 14.66 | 2.09 | Ferritin | 1555 | 2589 |
THC0290_N_0659 | 3prime | 1087703:1087790 + | A1747 B546 C143 | 8.06 | 2.80 | new transcription segment | 1557 | 3275 | |
THC0290_0931 | CDS | 1092634:1095516 + | A1796 B549 C143 | 12.58 | 5.41 | Collagenase precursor | 1565 | 3878 | |
THC0290_N_0663 | 3prime | 1095517:1095601 + | A1795 B549 C143 | 10.27 | 7.09 | new transcription segment | 1566 | 3854 | |
THC0290_0938 | aroE | CDS | 1105425:1106162 + | A1272 B425 C125 | 10.33 | -1.31 | Shikimate dehydrogenase | 1578 | 2409 |
THC0290_0942 | clpB | CDS | 1110287:1112887 + | A1213 B415 C124 | 11.35 | -1.56 | ATPase with chaperone activity ATP-binding subunit | 1585 | 2277 |
THC0290_0944 | CDS | 1115625:1117259 + | A1762 B546 C143 | 11.44 | 1.02 | Probable S8 subtilisin family serine endopeptidase precursor | 1591 | 3401 | |
THC0290_N_0675 | Rfp45 | indep | 1119827:1119911 - | A1765 B546 C143 | 9.48 | 3.98 | new transcription segment | 1595 | 3510 |
THC0290_0947 | CDS | 1120307:1120960 - | A1768 B546 C143 | 9.55 | 1.19 | Protein of unknown function precursor | 1597 | 3698 | |
THC0290_N_0677 | 5prime | 1120961:1121203 - | A1768 B546 C143 | 10.80 | 2.19 | new transcription segment | 1598 | 3658 | |
THC0290_N_0680 | intra | 1123924:1124271 - | A325 B121 C33 | 7.05 | -1.17 | new transcription segment | 1605 | 412 | |
THC0290_N_0682 | intra | 1125260:1125357 - | A296 B110 C31 | 5.16 | -1.63 | new transcription segment | 1609 | 381 | |
THC0290_0954 | CDS | 1125358:1125897 - | A542 B180 C44 | 13.45 | -1.43 | Protein of unknown function | 1610 | 763 | |
THC0290_0960 | CDS | 1130977:1132209 - | A1779 B546 C143 | 10.02 | 1.17 | Major facilitator superfamily (MFS) permease | 1619 | 3815 | |
THC0290_N_0687 | 3prime | 1134182:1134362 - | A197 B70 C21 | 8.41 | 1.54 | new transcription segment | 1624 | 244 | |
THC0290_N_0688 | 3prime | 1134356:1134819 + | A1820 B557 C145 | 7.28 | 1.66 | new transcription segment | 1625 | 3913 | |
THC0290_0965 | CDS | 1135455:1135643 - | A1769 B546 C143 | 10.29 | 1.31 | Hypothetical protein | 1627 | 3791 | |
THC0290_N_0689 | 3prime-PT | 1135956:1136305 - | A572 B183 C44 | 7.88 | -1.87 | new transcription segment | 1629 | 847 | |
THC0290_0969 | CDS | 1138406:1138603 + | A1751 B546 C143 | 14.04 | 2.25 | Protein of unknown function | 1632 | 3335 | |
THC0290_N_0692 | 3prime-PT | 1138630:1139078 + | A1766 B546 C143 | 8.43 | 4.02 | new transcription segment | 1633 | 3562 | |
THC0290_N_0694 | 3prime | 1141686:1141770 - | A99 B44 C16 | 6.64 | -2.18 | new transcription segment | 1638 | 120 | |
THC0290_0975 | CDS | 1144105:1145307 + | A3 B3 C2 | 9.92 | -1.22 | Cys/Met metabolism PLP-dependent enzyme | 1644 | 3 | |
THC0290_0977 | CDS | 1147602:1149359 - | A1795 B549 C143 | 7.66 | 5.48 | Esterase/lipase/thioesterase family protein precursor | 1647 | 3864 | |
THC0290_0978 | katG | CDS | 1149873:1152080 + | A1791 B549 C143 | 11.86 | 4.73 | Bi-functional catalase-peroxidase | 1649 | 3846 |
THC0290_0979 | CDS | 1152256:1152894 + | A1864 B574 C149 | 14.26 | 1.82 | Probable peroxiredoxin | 1650 | 3964 | |
THC0290_N_0699 | intra | 1152895:1152978 + | A1864 B574 C149 | 9.11 | 1.12 | new transcription segment | 1651 | 3965 | |
THC0290_0981 | CDS | 1153330:1153587 + | A1864 B574 C149 | 12.61 | 1.54 | Hypothetical protein | 1653 | 3963 | |
THC0290_N_0701 | 3prime-PT | 1153613:1154322 + | A1661 B542 C143 | 7.30 | 2.62 | new transcription segment | 1654 | 3034 | |
THC0290_0986 | CDS | 1159706:1160173 - | A884 B274 C75 | 11.10 | 1.73 | Probable transcriptional regulator, MarR-family | 1661 | 1810 | |
THC0290_0990 | mrsB1 | CDS | 1164703:1165185 - | A1350 B467 C136 | 11.32 | 1.06 | Probable protein-methionine-S-oxide reductase MrsB1 | 1666 | 2507 |
THC0290_0991 | CDS | 1165196:1165933 - | A1350 B467 C136 | 11.17 | 1.26 | Protein of unknown function | 1667 | 2508 | |
THC0290_N_0709 | 5prime | 1168710:1168824 + | A838 B254 C69 | 9.51 | -2.33 | new transcription segment | 1671 | 1746 | |
THC0290_0994 | lon | CDS | 1168825:1171275 + | A837 B254 C69 | 10.99 | -2.14 | S16 family, ATP-dependent endopeptidase La | 1672 | 1744 |
THC0290_N_0710 | intra | 1171276:1171449 + | A836 B254 C69 | 7.14 | -2.28 | new transcription segment | 1673 | 1743 | |
THC0290_0998 | CDS | 1174719:1175126 - | A600 B183 C44 | 12.48 | -1.87 | Hypothetical protein | 1679 | 1075 | |
THC0290_0999 | CDS | 1175136:1176107 - | A600 B183 C44 | 12.45 | -1.63 | Protein of unknown function | 1680 | 1076 | |
THC0290_1003 | rnz | CDS | 1180295:1181200 + | A601 B183 C44 | 11.56 | -1.21 | Ribonuclease Z | 1688 | 1141 |
THC0290_N_0716 | intra | 1181201:1181289 + | A459 B168 C44 | 10.02 | -1.44 | new transcription segment | 1689 | 596 | |
THC0290_N_0717 | Rfp47 | indep | 1182025:1182142 + | A1683 B545 C143 | 11.90 | 4.39 | new transcription segment | 1691 | 3086 |
THC0290_1011 | CDS | 1191683:1192117 + | A1584 B532 C143 | 13.39 | 1.00 | Protein of unknown function precursor | 1704 | 2856 | |
THC0290_N_0723 | intra | 1192145:1192355 + | A1747 B546 C143 | 10.40 | 2.52 | new transcription segment | 1705 | 3248 | |
THC0290_N_0725 | 3prime | 1194079:1194140 + | A632 B183 C44 | 5.41 | -2.99 | new transcription segment | 1709 | 1365 | |
THC0290_1015 | CDS | 1195821:1196102 + | A1628 B539 C143 | 6.33 | 2.17 | Protein of unknown function | 1711 | 2940 | |
THC0290_1019 | kdpC | CDS | 1200577:1201131 + | A1629 B539 C143 | 7.21 | 1.18 | Potassium-transporting ATPase C subunit | 1715 | 2945 |
THC0290_1024 | CDS | 1206629:1207081 - | A1768 B546 C143 | 10.91 | 1.68 | Probable lipoprotein precursor | 1723 | 3628 | |
THC0290_N_0729 | 3prime | 1208128:1208301 + | A1369 B470 C136 | 8.84 | 1.68 | new transcription segment | 1727 | 2536 | |
THC0290_1035 | CDS | 1212972:1213316 + | A1762 B546 C143 | 14.91 | 1.66 | Protein of unknown function | 1736 | 3394 | |
THC0290_N_0733 | 3prime | 1213317:1213392 + | A1762 B546 C143 | 9.79 | 3.83 | new transcription segment | 1737 | 3413 | |
THC0290_N_0734 | 3prime | 1213392:1213452 - | A1768 B546 C143 | 13.91 | 2.13 | new transcription segment | 1738 | 3723 | |
THC0290_1036 | fjo10 | CDS | 1213453:1213833 - | A1768 B546 C143 | 13.20 | 2.37 | Probable lipoprotein precursor Fjo10. Putative cation transport ATPase | 1739 | 3724 |
THC0290_1037 | fjo11 | CDS | 1213924:1214790 + | A1235 B419 C125 | 7.91 | 1.03 | Probable transmembrane protein of unknown function Fjo11 | 1740 | 2309 |
THC0290_1042 | cafA | CDS | 1218140:1219684 - | A599 B183 C44 | 11.04 | -1.82 | Ribonuclease G | 1749 | 1006 |
THC0290_N_0738 | intra | 1219685:1219937 - | A599 B183 C44 | 10.29 | -2.08 | new transcription segment | 1750 | 1007 | |
THC0290_1044 | mutY | CDS | 1220495:1221526 + | A332 B123 C34 | 8.09 | -1.06 | A/G-specific adenine glycosylase | 1753 | 432 |
THC0290_1048 | CDS | 1225034:1227307 - | A1156 B395 C120 | 9.14 | 1.07 | Protein of unknown function precursor, putative adhesin | 1758 | 2190 | |
THC0290_1049 | CDS | 1227322:1228158 - | A123 B51 C18 | 9.92 | 1.12 | Probable ABC-type transport system, permease component | 1760 | 156 | |
THC0290_1050 | CDS | 1228194:1229117 - | A1386 B477 C139 | 10.92 | 1.24 | Probable ABC-type transport system, ATPase component | 1761 | 2555 | |
THC0290_N_0743 | intra | 1229140:1229219 - | A411 B155 C43 | 8.08 | -1.32 | new transcription segment | 1762 | 526 | |
THC0290_1054 | CDS | 1231465:1232691 - | A1765 B546 C143 | 9.90 | 2.38 | Protein of unknown function precursor containing a C-terminal secretion signal | 1769 | 3479 | |
THC0290_1057 | CDS | 1236086:1237453 + | A556 B183 C44 | 11.32 | -1.30 | Membrane protein containing an internal histidine kinase domain | 1773 | 810 | |
THC0290_1059 | CDS | 1237798:1238103 + | A556 B183 C44 | 10.75 | -1.27 | Protein of unknown function | 1775 | 809 | |
THC0290_1063 | coxA | CDS | 1240263:1241282 - | A1753 B546 C143 | 9.82 | 1.29 | Cytochrome c oxidase assembly protein | 1780 | 3343 |
THC0290_N_0750 | intra | 1245836:1245885 - | A1550 B523 C143 | 12.58 | -1.06 | new transcription segment | 1786 | 2796 | |
THC0290_1075 | CDS | 1253443:1254381 + | A601 B183 C44 | 9.83 | -1.55 | Glycosyl transferase, group 2 family protein | 1796 | 1172 | |
THC0290_1076 | CDS | 1254381:1255154 + | A601 B183 C44 | 8.94 | -1.65 | Probable polysaccharide deacetylase | 1797 | 1155 | |
THC0290_1077 | CDS | 1255157:1255903 + | A580 B183 C44 | 8.21 | -1.41 | Glycosyl transferase, group 2 family protein | 1798 | 876 | |
THC0290_1078 | CDS | 1255885:1257000 - | A494 B173 C44 | 8.99 | -1.15 | Putative mannosyltransferase | 1799 | 659 | |
THC0290_N_0754 | intra | 1257001:1257153 - | A369 B141 C39 | 9.81 | -1.04 | new transcription segment | 1801 | 471 | |
THC0290_N_0757 | 3prime | 1260740:1260926 - | A1229 B418 C125 | 11.58 | 1.74 | new transcription segment | 1807 | 2302 | |
THC0290_1082 | dsbD | CDS | 1260927:1262939 - | A119 B49 C18 | 11.36 | 1.62 | Thiol:disulfide interchange protein DsbD precursor | 1808 | 151 |
THC0290_1085 | CDS | 1265923:1266828 + | A1243 B419 C125 | 9.54 | 1.92 | Probable lipoprotein precursor | 1812 | 2322 | |
THC0290_1086 | ddpX | CDS | 1266894:1267535 + | A1361 B469 C136 | 9.01 | 1.05 | D-alanyl-D-alanine dipeptidase | 1813 | 2522 |
THC0290_1090 | CDS | 1270459:1271454 - | A725 B207 C54 | 9.65 | 2.04 | Probable M43 cytophagalysin family metalloprotease precursor | 1819 | 1582 | |
THC0290_N_0761 | 5prime | 1274218:1274287 + | A1768 B546 C143 | 10.35 | 2.89 | new transcription segment | 1823 | 3659 | |
THC0290_1099 | CDS | 1283185:1284720 + | A1792 B549 C143 | 10.40 | 1.38 | Protein of unknown function | 1836 | 3847 | |
THC0290_N_0769 | intra | 1284721:1285209 + | A1794 B549 C143 | 8.39 | 1.15 | new transcription segment | 1838 | 3850 | |
THC0290_1100 | yojE | CDS | 1285018:1285905 - | A572 B183 C44 | 8.28 | -1.44 | Probable permease YojE | 1839 | 846 |
THC0290_N_0773 | 3prime | 1289168:1289525 - | A1125 B375 C109 | 12.45 | -1.00 | new transcription segment | 1845 | 2157 | |
THC0290_N_0779 | 3prime | 1297987:1298261 - | A1644 B540 C143 | 7.47 | 1.74 | new transcription segment | 1857 | 2989 | |
THC0290_1110 | CDS | 1298262:1298678 - | A1721 B546 C143 | 10.29 | 1.33 | Probable arsenate reductase (glutaredoxin) | 1859 | 3177 | |
THC0290_1111 | CDS | 1298680:1299294 - | A1721 B546 C143 | 10.77 | 1.92 | Protein of unknown function | 1860 | 3178 | |
THC0290_1112 | CDS | 1299295:1299420 - | A1721 B546 C143 | 9.81 | 2.49 | Hypothetical protein | 1861 | 3179 | |
THC0290_1113 | CDS | 1299423:1299896 - | A1721 B546 C143 | 11.18 | 3.19 | Protein of unknown function | 1862 | 3175 | |
THC0290_N_0781 | intra | 1299897:1299959 - | A1721 B546 C143 | 12.64 | 3.66 | new transcription segment | 1863 | 3176 | |
THC0290_1114 | CDS | 1299960:1300283 - | A1721 B546 C143 | 10.82 | 6.09 | Probable transcriptional regulator, ArsR family | 1864 | 3174 | |
THC0290_1116 | dgkA | CDS | 1301176:1301556 + | A645 B183 C44 | 11.84 | -1.52 | Diacylglycerol kinase | 1866 | 1400 |
THC0290_N_0782 | intra | 1301557:1301748 + | A458 B168 C44 | 10.90 | -1.80 | new transcription segment | 1867 | 595 | |
THC0290_1117 | ftsK | CDS | 1301749:1304211 + | A645 B183 C44 | 10.54 | -1.38 | DNA translocase FtsK | 1868 | 1401 |
THC0290_1118 | lolA | CDS | 1304216:1304857 + | A417 B158 C44 | 10.33 | -1.17 | Outer-membrane lipoprotein carrier protein precursor LolA | 1869 | 533 |
THC0290_N_0785 | 3prime | 1307664:1307713 + | A1766 B546 C143 | 8.05 | 1.32 | new transcription segment | 1874 | 3564 | |
THC0290_N_0786 | 3prime | 1308797:1309548 - | A293 B108 C30 | 6.84 | -1.41 | new transcription segment | 1876 | 378 | |
THC0290_1122 | CDS | 1309549:1311003 - | A581 B183 C44 | 9.00 | -1.77 | Probable modification methyltransferase | 1877 | 883 | |
THC0290_1123 | CDS | 1311015:1311827 - | A581 B183 C44 | 8.67 | -1.47 | Protein of unknown function | 1878 | 882 | |
THC0290_1124 | CDS | 1311834:1313342 - | A578 B183 C44 | 8.25 | -1.86 | Protein of unknown function | 1879 | 860 | |
THC0290_1125 | CDS | 1313339:1315027 - | A578 B183 C44 | 8.28 | -1.62 | Probable type I restriction-modification system, DNA specificity domain protein | 1880 | 861 | |
THC0290_N_0787 | intra | 1316615:1316949 - | A1715 B546 C143 | 8.95 | 1.93 | new transcription segment | 1883 | 3157 | |
THC0290_1135 | CDS | 1327350:1327610 - | A1768 B546 C143 | 6.78 | 1.06 | Hypothetical protein | 1893 | 3711 | |
THC0290_1137 | CDS | 1329295:1330215 - | A1795 B549 C143 | 7.44 | 2.61 | Probable transcriptional regulator, AraC family | 1895 | 3873 | |
THC0290_1138 | CDS | 1330262:1330645 - | A1795 B549 C143 | 7.53 | 2.44 | Hypothetical protein | 1896 | 3857 | |
THC0290_1139 | gene | 1330865:1331572 + | A1529 B521 C143 | 4.86 | 1.27 | Truncated protein, N-terminal region | 1897 | 2767 | |
THC0290_1149 | gene | 1338209:1338670 + | A1744 B546 C143 | 5.19 | 1.22 | Truncated protein, C-terminal region | 1907 | 3229 | |
THC0290_1166 | CDS | 1357451:1358482 + | A351 B130 C36 | 4.72 | -1.42 | Probable glycosidase, PH1107-related protein | 1924 | 451 | |
THC0290_1167 | CDS | 1358484:1360820 + | A930 B291 C80 | 5.34 | -1.41 | Glycosyl transferase, group 1 family protein | 1925 | 1866 | |
THC0290_1177 | gene | 1366017:1366154 + | A1747 B546 C143 | 6.14 | 1.60 | Truncated protein | 1936 | 3305 | |
THC0290_1184 | gene | 1371353:1371625 + | A1324 B457 C133 | 4.82 | -1.49 | TspO and MBR like protein (fragment) | 1943 | 2470 | |
THC0290_1193 | CDS | 1381373:1381627 + | A1768 B546 C143 | 8.91 | 3.02 | Hypothetical protein | 1953 | 3714 | |
THC0290_1195 | CDS | 1381938:1382327 + | A1768 B546 C143 | 5.63 | 1.22 | Hypothetical protein | 1955 | 3708 | |
THC0290_1200 | CDS | 1384769:1384954 + | A1747 B546 C143 | 8.10 | 1.48 | CsbD family protein | 1960 | 3271 | |
THC0290_1201 | CDS | 1384990:1385493 + | A1765 B546 C143 | 8.01 | 1.06 | Hypothetical lipoprotein precursor | 1961 | 3467 | |
THC0290_1203 | CDS | 1386310:1386462 + | A1311 B450 C132 | 6.86 | 1.02 | Conserved exported protein of unknown function | 1963 | 2453 | |
THC0290_1204 | CDS | 1386496:1386726 + | A1768 B546 C143 | 9.43 | 2.08 | Hypothetical protein | 1964 | 3689 | |
THC0290_1205 | CDS | 1386748:1387101 + | A1768 B546 C143 | 7.99 | 2.14 | Hypothetical protein | 1965 | 3690 | |
THC0290_N_0791 | Rfp52 | indep | 1390344:1391243 - | A1768 B546 C143 | 7.47 | 1.03 | new transcription segment | 1969 | 3695 |
THC0290_N_0794 | 3prime-PT | 1396900:1397099 + | A1645 B540 C143 | 8.03 | 1.47 | new transcription segment | 1976 | 2996 | |
THC0290_miscRNA_0044 | Rfp54 | misc_RNA | 1402818:1403137 + | A1768 B546 C143 | 16.36 | 1.49 | Bacterial Rnase P class A | 1982 | 3726 |
THC0290_tRNA_0020 | tRNA | 1406725:1406801 + | A762 B226 C62 | 16.25 | 1.25 | transfer RNA-Ala | 1988 | 1636 | |
THC0290_1216 | gene | 1410277:1411122 - | A1747 B546 C143 | 5.36 | 1.36 | Truncated transposase ISL3 family, C-terminal region | 1991 | 3301 | |
THC0290_1223 | CDS | 1418395:1418796 - | A1795 B549 C143 | 9.72 | 1.20 | Protein of unknown function | 2000 | 3874 | |
THC0290_1224 | CDS | 1418799:1419512 - | A1795 B549 C143 | 11.21 | 1.14 | Protein of unknown function | 2002 | 3875 | |
THC0290_1231 | CDS | 1425441:1426022 - | A1542 B522 C143 | 8.18 | -1.20 | Probable transmembrane protein of unknown function | 2013 | 2785 | |
THC0290_1236 | CDS | 1428816:1429214 - | A1793 B549 C143 | 10.53 | 1.46 | Cytochrome c family protein | 2018 | 3849 | |
THC0290_1237 | CDS | 1429217:1429477 - | A684 B192 C48 | 7.49 | -2.96 | Hypothetical transmembrane protein | 2019 | 1484 | |
THC0290_1238 | CDS | 1429483:1430496 - | A684 B192 C48 | 6.91 | -3.19 | Cytochrome c oxidase family protein | 2020 | 1485 | |
THC0290_1239 | CDS | 1430503:1432671 - | A688 B193 C48 | 7.49 | -2.25 | Cytochrome c oxidase family protein | 2021 | 1494 | |
THC0290_1242 | CDS | 1434834:1435964 - | A707 B201 C52 | 9.67 | -2.60 | Probable membrane fusion efflux lipoprotein precursor | 2025 | 1536 | |
THC0290_1243 | CDS | 1435961:1436539 - | A707 B201 C52 | 9.08 | -2.75 | Probable transcriptional regulator, TetR family | 2026 | 1537 | |
THC0290_N_0806 | Rfp55 | indep | 1436072:1436459 + | A1768 B546 C143 | 7.29 | 2.00 | new transcription segment | 2027 | 3667 |
THC0290_1245 | CDS | 1438036:1438314 - | A545 B180 C44 | 11.09 | -1.33 | Thiol:disulfide interchange protein, C-terminal region | 2032 | 772 | |
THC0290_N_0811 | intra | 1438315:1438460 - | A545 B180 C44 | 11.62 | -1.86 | new transcription segment | 2033 | 774 | |
THC0290_1246 | CDS | 1438461:1439183 - | A545 B180 C44 | 11.93 | -1.24 | Thiol:disulfide interchange lipoprotein precursor, N-terminal region | 2034 | 773 | |
THC0290_N_0813 | intra | 1440159:1440329 + | A921 B286 C78 | 8.76 | 1.83 | new transcription segment | 2038 | 1855 | |
THC0290_N_0814 | Rfp56 | indep | 1444415:1444724 - | A1768 B546 C143 | 7.37 | 2.44 | new transcription segment | 2041 | 3700 |
THC0290_N_0815 | 3prime | 1446042:1446224 - | A1762 B546 C143 | 11.77 | 1.04 | new transcription segment | 2043 | 3426 | |
THC0290_1252 | CDS | 1446225:1446704 - | A1762 B546 C143 | 13.43 | 1.90 | Universal stress protein, UspA family | 2044 | 3425 | |
THC0290_N_0816 | intra | 1446727:1446954 - | A1795 B549 C143 | 9.18 | 1.31 | new transcription segment | 2045 | 3872 | |
THC0290_1253 | CDS | 1446955:1448118 - | A1762 B546 C143 | 10.89 | 1.55 | Probable two-component system response regulatory protein - glycosyl transferase, group 2 family protein | 2046 | 3395 | |
THC0290_1254 | CDS | 1448226:1451315 + | A1664 B542 C143 | 7.44 | 1.34 | Probable transmembrane protein | 2047 | 3043 | |
THC0290_1255 | CDS | 1451315:1452553 + | A1874 B578 C149 | 7.23 | 1.15 | Protein of unknown function precursor | 2048 | 3976 | |
THC0290_1257 | CDS | 1454090:1455256 - | A1795 B549 C143 | 9.31 | 2.38 | Glycosyl transferase, group 1 family protein | 2050 | 3868 | |
THC0290_1258 | CDS | 1455281:1456540 - | A1795 B549 C143 | 7.70 | 2.60 | Putative capsular polysaccharide biosynthesis protein | 2051 | 3866 | |
THC0290_N_0818 | 3prime | 1459920:1459991 + | A1589 B533 C143 | 6.29 | 1.26 | new transcription segment | 2055 | 2862 | |
THC0290_N_0821 | 3prime | 1467104:1468011 - | A1779 B546 C143 | 8.87 | 1.68 | new transcription segment | 2065 | 3813 | |
THC0290_1270 | CDS | 1468900:1469292 + | A1615 B535 C143 | 11.09 | 1.77 | Protein of unknown function | 2068 | 2917 | |
THC0290_N_0822 | 3prime | 1469293:1469476 + | A1615 B535 C143 | 9.83 | 1.92 | new transcription segment | 2069 | 2918 | |
THC0290_1272 | hisF | CDS | 1469906:1470661 - | A723 B206 C54 | 5.09 | -1.43 | Imidazole glycerol phosphate synthase subunit HisF | 2071 | 1580 |
THC0290_1273 | hisA | CDS | 1470665:1471390 - | A708 B202 C53 | 5.05 | -1.47 | 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase | 2072 | 1538 |
THC0290_N_0823 | intra | 1472127:1472214 - | A708 B202 C53 | 4.58 | -1.43 | new transcription segment | 2075 | 1539 | |
THC0290_N_0831 | 3prime | 1485875:1486044 + | A1642 B540 C143 | 7.53 | 1.02 | new transcription segment | 2094 | 2982 | |
THC0290_1286 | CDS | 1485887:1486099 - | A1765 B546 C143 | 9.15 | 1.31 | Hypothetical protein | 2095 | 3476 | |
THC0290_1287 | ppx | CDS | 1486086:1486976 - | A1076 B360 C106 | 10.37 | -1.24 | Exopolyphosphatase | 2096 | 2048 |
THC0290_N_0832 | intra | 1486977:1487036 - | A1076 B360 C106 | 10.58 | -1.42 | new transcription segment | 2097 | 2047 | |
THC0290_1291 | CDS | 1490287:1490424 - | A1698 B546 C143 | 6.14 | 2.07 | Conserved protein of unknown function (fragment) | 2102 | 3110 | |
THC0290_1293 | CDS | 1492056:1492418 - | A601 B183 C44 | 10.57 | -2.18 | Protein of unknown function | 2106 | 1174 | |
THC0290_1294 | CDS | 1492421:1493350 - | A601 B183 C44 | 11.46 | -2.42 | Probable UDP-N-acetylglucosamine acyltransferase | 2107 | 1175 | |
THC0290_1295 | efp | CDS | 1493357:1493920 - | A601 B183 C44 | 11.41 | -2.14 | Elongation factor P (EF-P) | 2108 | 1173 |
THC0290_N_0837 | intra | 1493921:1493987 - | A600 B183 C44 | 10.68 | -1.36 | new transcription segment | 2109 | 1087 | |
THC0290_1296 | lpxA | CDS | 1493988:1494770 - | A600 B183 C44 | 11.20 | -1.45 | Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase | 2110 | 1085 |
THC0290_N_0838 | intra | 1494771:1494824 - | A600 B183 C44 | 11.28 | -1.59 | new transcription segment | 2111 | 1082 | |
THC0290_1297 | lpxC/fabZ | CDS | 1494825:1496213 - | A600 B183 C44 | 11.29 | -1.34 | Bifunctional enzyme : UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase and (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase | 2112 | 1086 |
THC0290_1298 | lpxD | CDS | 1496216:1497235 - | A600 B183 C44 | 11.07 | -1.04 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase | 2113 | 1109 |
THC0290_N_0839 | 5prime | 1497236:1497324 - | A460 B168 C44 | 8.39 | -1.10 | new transcription segment | 2114 | 598 | |
THC0290_N_0840 | Rfp57 | indep | 1497415:1497522 + | A1768 B546 C143 | 8.61 | 3.84 | new transcription segment | 2116 | 3647 |
THC0290_1303 | CDS | 1502141:1504564 - | A959 B304 C83 | 7.42 | 1.35 | Probable TonB-dependent outer membrane receptor precursor | 2124 | 1899 | |
THC0290_N_0844 | Rfp59 | indep | 1505987:1506397 - | A1768 B546 C143 | 6.80 | 1.67 | new transcription segment | 2126 | 3680 |
THC0290_N_0846 | intra | 1509590:1509687 - | A1775 B546 C143 | 8.60 | 1.19 | new transcription segment | 2131 | 3801 | |
THC0290_1309 | gene | 1510782:1511459 + | A1765 B546 C143 | 11.37 | 1.72 | Fragment of two-component system sensor histidine kinase (part 1) | 2133 | 3489 | |
THC0290_1311 | gene | 1512751:1513449 + | A1765 B546 C143 | 8.68 | 2.06 | Fragment of two-component system sensor histidine kinase (part 2) | 2135 | 3491 | |
THC0290_1314 | CDS | 1514838:1515227 - | A1747 B546 C143 | 9.49 | 1.09 | Probable transmembrane protein of unknown function | 2138 | 3250 | |
THC0290_1315 | CDS | 1515410:1516276 + | A1104 B371 C109 | 7.15 | -1.26 | Probable transcriptional regulator, AraC family | 2139 | 2128 | |
THC0290_1316 | CDS | 1516638:1518572 + | A687 B193 C48 | 10.02 | -1.15 | Probable myosin-crossreactive antigen | 2140 | 1489 | |
THC0290_1320 | CDS | 1521863:1523305 - | A600 B183 C44 | 11.14 | -1.64 | Phosphate transporter family protein | 2144 | 1105 | |
THC0290_1321 | CDS | 1523330:1523983 - | A542 B180 C44 | 10.67 | -1.27 | Protein of unknown function | 2145 | 762 | |
THC0290_1324 | CDS | 1527411:1529042 + | A601 B183 C44 | 10.10 | -1.52 | Probable M1 family metalloprotease precursor | 2148 | 1179 | |
THC0290_N_0847 | intra | 1529964:1530048 + | A319 B119 C33 | 9.77 | -1.31 | new transcription segment | 2150 | 406 | |
THC0290_1327 | CDS | 1530569:1530829 + | A692 B195 C50 | 10.12 | -1.31 | Protein of unknown function | 2152 | 1499 | |
THC0290_1331 | CDS | 1536113:1536958 - | A1751 B546 C143 | 12.26 | 1.11 | Protein of unknown function precursor | 2156 | 3340 | |
THC0290_1332 | CDS | 1537097:1537567 + | A1763 B546 C143 | 10.89 | 5.12 | Protein of unknown function | 2157 | 3441 | |
THC0290_1333 | CDS | 1537570:1538268 + | A1763 B546 C143 | 10.52 | 4.26 | Probable short-chain type dehydrogenase | 2158 | 3442 | |
THC0290_1334 | phrB1 | CDS | 1538431:1539717 + | A1763 B546 C143 | 9.25 | 2.21 | Deoxyribodipyrimidine photolyase PhrB1 | 2160 | 3436 |
THC0290_1335 | CDS | 1539932:1540345 + | A1449 B502 C142 | 11.33 | 4.45 | Probable two-component system response regulatory protein | 2161 | 2640 | |
THC0290_1336 | CDS | 1540353:1540895 + | A1763 B546 C143 | 10.96 | 2.94 | Protein of unknown function containing an heme NO Binding domain | 2162 | 3430 | |
THC0290_1337 | CDS | 1540897:1543509 + | A1762 B546 C143 | 9.96 | 1.34 | Two-component system sensor histidine kinase | 2163 | 3388 | |
THC0290_1338 | CDS | 1543512:1544648 + | A1876 B578 C149 | 10.16 | 1.02 | Protein of unknown function | 2164 | 3979 | |
THC0290_N_0849 | 3prime | 1546143:1546768 - | A1665 B542 C143 | 8.40 | 2.02 | new transcription segment | 2168 | 3046 | |
THC0290_1342 | CDS | 1546769:1548826 - | A1669 B542 C143 | 9.62 | 1.36 | Protein of unknown function precursor | 2170 | 3057 | |
THC0290_1343 | CDS | 1549155:1552811 - | A1795 B549 C143 | 9.01 | 4.08 | Protein of unknown function precursor containing PKD domains and a C-terminal secretion signal | 2171 | 3855 | |
THC0290_1344 | CDS | 1552913:1553296 - | A1795 B549 C143 | 9.35 | 4.57 | Transposase IS1 family | 2172 | 3856 | |
THC0290_1348 | bfmBA | CDS | 1558467:1560443 - | A600 B183 C44 | 11.23 | -1.13 | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) | 2180 | 1107 |
THC0290_N_0856 | intra | 1561715:1561857 + | A459 B168 C44 | 9.79 | -2.02 | new transcription segment | 2183 | 597 | |
THC0290_N_0859 | intra | 1563843:1563921 + | A412 B155 C43 | 7.86 | -2.00 | new transcription segment | 2188 | 527 | |
THC0290_1353 | CDS | 1563922:1564455 + | A608 B183 C44 | 9.34 | -1.08 | Probable ribosomal-protein-amino-adic N-acetyltransferase | 2189 | 1265 | |
THC0290_1354 | CDS | 1564460:1564954 + | A585 B183 C44 | 7.85 | -1.42 | Protein of unknown function | 2190 | 909 | |
THC0290_1358 | ung | CDS | 1568078:1568740 - | A1768 B546 C143 | 9.21 | 1.22 | Uracil-DNA glycosylase | 2197 | 3718 |
THC0290_N_0865 | 3prime | 1580293:1580351 + | A1768 B546 C143 | 9.73 | 2.99 | new transcription segment | 2208 | 3722 | |
THC0290_N_0867 | 3prime-PT | 1580352:1580535 + | A1676 B543 C143 | 7.25 | 2.48 | new transcription segment | 2210 | 3079 | |
THC0290_miscRNA_0045 | Rfp61 | misc_RNA | 1582336:1582433 - | A1769 B546 C143 | 14.04 | 4.41 | Bacterial small signal recognition particle RNA | 2217 | 3762 |
THC0290_1372 | CDS | 1584148:1584330 - | A1458 B505 C142 | 11.65 | 1.13 | Hypothetical protein | 2221 | 2652 | |
THC0290_1383 | tdk | CDS | 1591927:1592535 + | A1604 B535 C143 | 11.53 | 1.10 | Thymidine kinase | 2238 | 2890 |
THC0290_1385 | mscL | CDS | 1595085:1595501 + | A601 B183 C44 | 13.84 | -1.41 | Large-conductance mechanosensitive channel | 2241 | 1180 |
THC0290_tRNA_0022 | tRNA | 1599447:1599524 + | A1768 B546 C143 | 14.18 | 3.42 | transfer RNA-Val | 2249 | 3669 | |
THC0290_tRNA_0023 | tRNA | 1604080:1604156 - | A762 B226 C62 | 16.28 | 1.26 | transfer RNA-Ala | 2255 | 1639 | |
THC0290_N_0884 | Rfp62 | indep | 1606778:1606919 + | A1243 B419 C125 | 9.31 | 1.99 | new transcription segment | 2258 | 2325 |
THC0290_N_0885 | intra | 1606920:1607067 + | A1243 B419 C125 | 6.77 | 1.06 | new transcription segment | 2260 | 2326 | |
THC0290_1394 | infC | CDS | 1609187:1609600 + | A541 B180 C44 | 12.29 | -1.09 | Translation initiation factor IF-3 | 2263 | 755 |
THC0290_N_0887 | intra | 1609601:1609709 + | A541 B180 C44 | 11.40 | -2.68 | new transcription segment | 2264 | 756 | |
THC0290_1395 | rpmI | CDS | 1609710:1609907 + | A82 B37 C15 | 14.70 | -1.29 | 50S ribosomal protein L35 | 2265 | 97 |
THC0290_N_0888 | intra | 1609908:1610081 + | A82 B37 C15 | 15.20 | -1.14 | new transcription segment | 2266 | 98 | |
THC0290_1398 | mscS1 (mscS1) | CDS | 1614223:1616094 - | A644 B183 C44 | 8.87 | -1.38 | Probable small-conductance mechanosensitive ion channel MscS1 | 2274 | 1399 |
THC0290_N_0893 | intra | 1616095:1616417 - | A601 B183 C44 | 7.61 | -3.03 | new transcription segment | 2275 | 1128 | |
THC0290_1399 | CDS | 1616418:1617146 - | A601 B183 C44 | 8.51 | -2.54 | Probable transmembrane protein of unknown function | 2276 | 1127 | |
THC0290_1400 | aldH | CDS | 1617164:1618492 - | A600 B183 C44 | 8.90 | -1.94 | Aldehyde dehydrogenase | 2277 | 1074 |
THC0290_1401 | CDS | 1618519:1619214 - | A600 B183 C44 | 9.91 | -1.57 | Probable 23S rRNA pseudouridine synthase | 2278 | 1077 | |
THC0290_1402 | CDS | 1619248:1620525 - | A600 B183 C44 | 9.07 | -1.22 | Probable S41 family peptidase precursor | 2279 | 1100 | |
THC0290_N_0896 | intra | 1625494:1625575 + | A1669 B542 C143 | 8.74 | 1.25 | new transcription segment | 2284 | 3054 | |
THC0290_N_0898 | 3prime | 1626364:1626511 - | A1565 B527 C143 | 6.85 | 1.32 | new transcription segment | 2287 | 2833 | |
THC0290_N_0899 | 3prime-PT | 1626413:1626925 + | A1819 B557 C145 | 7.01 | 2.19 | new transcription segment | 2288 | 3910 | |
THC0290_1407 | CDS | 1626512:1627642 - | A1054 B347 C103 | 10.17 | 1.96 | Probable membrane fusion efflux lipoprotein precursor | 2289 | 2020 | |
THC0290_1408 | CDS | 1627716:1632059 - | A1054 B347 C103 | 10.49 | 2.77 | Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein | 2290 | 2021 | |
THC0290_N_0900 | intra | 1632060:1632186 - | A1054 B347 C103 | 9.94 | 3.39 | new transcription segment | 2291 | 2019 | |
THC0290_1409 | CDS | 1632187:1632579 - | A1625 B538 C143 | 12.42 | 1.32 | Protein of unknown function precursor | 2292 | 2936 | |
THC0290_N_0902 | 5prime | 1635372:1635544 + | A896 B278 C76 | 10.48 | -1.10 | new transcription segment | 2297 | 1825 | |
THC0290_N_0903 | Rfp64 | indep | 1635872:1635993 - | A1768 B546 C143 | 12.28 | 3.24 | new transcription segment | 2299 | 3683 |
THC0290_1414 | ltaE | CDS | 1636033:1637058 - | A1768 B546 C143 | 10.94 | 1.55 | Threonine aldolase | 2300 | 3637 |
THC0290_N_0904 | 5prime | 1637059:1637201 - | A1768 B546 C143 | 10.72 | 1.81 | new transcription segment | 2301 | 3639 | |
THC0290_1419 | CDS | 1642538:1643158 - | A1561 B526 C143 | 10.00 | 1.26 | Putative translation factor | 2309 | 2824 | |
THC0290_1424 | CDS | 1649508:1651811 + | A1787 B549 C143 | 10.22 | 2.05 | Probable aminotransferase | 2316 | 3838 | |
THC0290_N_0909 | 3prime | 1651812:1652166 + | A1795 B549 C143 | 9.50 | 2.20 | new transcription segment | 2317 | 3867 | |
THC0290_1425 | dnaK | CDS | 1652269:1654149 - | A840 B254 C69 | 13.81 | -2.06 | Chaperone protein DnaK | 2319 | 1755 |
THC0290_1427 | CDS | 1655558:1656199 - | A1768 B546 C143 | 10.06 | 1.07 | Rhomboid family protein | 2322 | 3707 | |
THC0290_N_0916 | 3prime | 1657246:1657531 + | A1378 B474 C137 | 7.91 | 1.11 | new transcription segment | 2326 | 2546 | |
THC0290_N_0917 | intra | 1658744:1659049 - | A590 B183 C44 | 8.71 | -2.06 | new transcription segment | 2327 | 937 | |
THC0290_1430 | CDS | 1659050:1662235 - | A581 B183 C44 | 10.22 | -1.08 | Putative N6 adenine-specific DNA methyltransferase | 2328 | 891 | |
THC0290_N_0918 | intra | 1662236:1662355 - | A843 B255 C69 | 10.69 | -1.07 | new transcription segment | 2329 | 1762 | |
THC0290_1433 | CDS | 1664543:1665136 + | A1762 B546 C143 | 8.87 | 2.35 | Protein of unknown function | 2333 | 3408 | |
THC0290_N_0921 | 3prime-PT | 1668796:1669027 - | A1651 B542 C143 | 6.84 | 2.37 | new transcription segment | 2338 | 3012 | |
THC0290_N_0923 | 3prime | 1669052:1669388 + | A1659 B542 C143 | 7.92 | 1.75 | new transcription segment | 2340 | 3032 | |
THC0290_1441 | speE | CDS | 1672956:1673624 + | A1768 B546 C143 | 10.14 | 1.55 | Putative spermidine synthase | 2350 | 3701 |
THC0290_N_0929 | 3prime | 1673625:1673962 + | A1644 B540 C143 | 6.79 | 1.35 | new transcription segment | 2352 | 2990 | |
THC0290_N_0930 | intra | 1675609:1675691 - | A1765 B546 C143 | 10.33 | 1.89 | new transcription segment | 2354 | 3540 | |
THC0290_1444 | CDS | 1675692:1676540 - | A1762 B546 C143 | 11.63 | 2.00 | Protein of unknown function | 2355 | 3424 | |
THC0290_N_0931 | intra | 1677803:1677869 + | A595 B183 C44 | 11.99 | -1.14 | new transcription segment | 2357 | 978 | |
THC0290_tRNA_0025 | tRNA | 1681059:1681135 - | A1769 B546 C143 | 13.38 | 5.04 | transfer RNA-Arg | 2365 | 3769 | |
THC0290_N_0937 | 5prime | 1681345:1681454 - | A1762 B546 C143 | 8.74 | 2.24 | new transcription segment | 2368 | 3420 | |
THC0290_N_0938 | intra | 1682775:1682974 + | A609 B183 C44 | 9.43 | -1.93 | new transcription segment | 2370 | 1268 | |
THC0290_1449 | CDS | 1682975:1683736 + | A605 B183 C44 | 10.46 | -1.32 | Probable cell wall-associated hydrolase | 2372 | 1220 | |
THC0290_1450 | yuxK | CDS | 1683750:1684166 + | A601 B183 C44 | 10.19 | -1.58 | Protein of unknown function YuxK | 2373 | 1176 |
THC0290_1451 | CDS | 1684233:1684379 + | A699 B199 C52 | 11.52 | -2.91 | Hypothetical protein | 2376 | 1516 | |
THC0290_1456 | CDS | 1688988:1690139 - | A1348 B467 C136 | 10.83 | 1.14 | Glycosyl transferase, group 1 family protein | 2383 | 2499 | |
THC0290_N_0944 | intra | 1690140:1690189 - | A1768 B546 C143 | 8.55 | 1.34 | new transcription segment | 2384 | 3643 | |
THC0290_1458 | CDS | 1691337:1691852 - | A493 B173 C44 | 9.26 | -1.74 | Protein of unknown function | 2386 | 657 | |
THC0290_1459 | CDS | 1691900:1692598 - | A617 B183 C44 | 9.76 | -1.19 | Probable transmembrane protein of unknown function | 2387 | 1313 | |
THC0290_1460 | CDS | 1692603:1695608 - | A493 B173 C44 | 8.89 | -1.07 | Glycoside hydrolase precursor family 3, putative beta-N-acetylglucosaminidase | 2388 | 658 | |
THC0290_N_0946 | intra | 1695609:1695759 - | A611 B183 C44 | 10.21 | -2.50 | new transcription segment | 2389 | 1287 | |
THC0290_1461 | CDS | 1695760:1696242 - | A619 B183 C44 | 9.77 | -1.62 | Protein of unknown function | 2390 | 1327 | |
THC0290_N_0947 | intra | 1696243:1696494 - | A619 B183 C44 | 10.39 | -1.00 | new transcription segment | 2391 | 1328 | |
THC0290_1468 | yjgF | CDS | 1704276:1704656 + | A595 B183 C44 | 11.55 | -1.78 | Protein of unknown function YjgF | 2401 | 966 |
THC0290_1469 | CDS | 1704759:1706072 - | A600 B183 C44 | 12.11 | -1.27 | Protein of unknown function precursor | 2404 | 1055 | |
THC0290_N_0956 | intra | 1711585:1711685 + | A378 B144 C41 | 4.75 | -1.71 | new transcription segment | 2409 | 484 | |
THC0290_1473 | CDS | 1713087:1713590 + | A611 B183 C44 | 9.63 | -1.26 | Probable transmembrane protein of unknown function | 2411 | 1289 | |
THC0290_N_0969 | 5prime | 1724967:1725040 - | A1745 B546 C143 | 9.51 | 1.09 | new transcription segment | 2435 | 3242 | |
THC0290_1491 | CDS | 1728002:1728229 + | A630 B183 C44 | 9.39 | -1.34 | Probable transmembrane protein of unknown function | 2443 | 1361 | |
THC0290_N_0973 | intra | 1728230:1728476 + | A372 B141 C39 | 9.14 | -1.08 | new transcription segment | 2444 | 476 | |
THC0290_1493 | CDS | 1728889:1729749 + | A1232 B419 C125 | 11.29 | 1.74 | Membrane protein, TerC family | 2447 | 2306 | |
THC0290_N_0975 | 3prime | 1729750:1730038 + | A1640 B540 C143 | 12.33 | 1.16 | new transcription segment | 2448 | 2978 | |
THC0290_N_0976 | 3prime | 1730076:1730154 - | A1573 B530 C143 | 9.44 | 2.31 | new transcription segment | 2449 | 2842 | |
THC0290_N_0977 | 5prime | 1732129:1732257 - | A1768 B546 C143 | 10.75 | 1.46 | new transcription segment | 2451 | 3627 | |
THC0290_1496 | CDS | 1735654:1738056 + | A536 B180 C44 | 12.06 | -2.07 | Putative pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits | 2454 | 733 | |
THC0290_N_0983 | 3prime | 1741575:1741661 + | A1765 B546 C143 | 9.87 | 2.97 | new transcription segment | 2461 | 3492 | |
THC0290_1507 | CDS | 1748731:1750641 - | A1017 B325 C88 | 11.84 | 2.68 | Probable transmembrane protein of unknown function | 2473 | 1972 | |
THC0290_1509 | CDS | 1752478:1752975 + | A1416 B488 C140 | 8.74 | 8.71 | Protein of unknown function | 2477 | 2595 | |
THC0290_1510 | gene | 1752990:1753640 + | A1416 B488 C140 | 9.20 | 7.02 | Conserved exported protein of unknown function (fragment) | 2479 | 2596 | |
THC0290_1512 | gene | 1757982:1758200 + | A1696 B546 C143 | 6.12 | 2.29 | Conserved exported protein of unknown function (fragment) | 2481 | 3107 | |
THC0290_1514 | CDS | 1759087:1759686 + | A1416 B488 C140 | 11.68 | 6.51 | Probable peroxiredoxin | 2484 | 2593 | |
THC0290_1515 | CDS | 1759690:1760178 + | A1416 B488 C140 | 11.04 | 5.05 | Protein of unknown function | 2485 | 2594 | |
THC0290_1516 | CDS | 1760166:1760876 + | A1416 B488 C140 | 10.38 | 4.84 | Protein of unknown function | 2486 | 2592 | |
THC0290_1517 | gene | 1760953:1761909 + | A1416 B488 C140 | 7.51 | 4.39 | Conserved protein of unknown function | 2487 | 2597 | |
THC0290_1518 | CDS | 1761915:1762550 + | A1416 B488 C140 | 5.60 | 3.39 | Probable transmembrane protein of unknown function | 2488 | 2598 | |
THC0290_tRNA_0028 | tRNA | 1770433:1770509 - | A1769 B546 C143 | 9.77 | 4.09 | transfer RNA-Arg | 2495 | 3771 | |
THC0290_1523 | CDS | 1770583:1770726 - | A1768 B546 C143 | 11.38 | 1.51 | Protein of unknown function | 2497 | 3735 | |
THC0290_N_0996 | intra | 1770727:1770819 - | A1186 B406 C122 | 9.73 | 1.78 | new transcription segment | 2498 | 2224 | |
THC0290_1524 | CDS | 1770820:1771647 - | A1185 B406 C122 | 11.38 | 1.45 | Probable lipoprotein precursor | 2499 | 2222 | |
THC0290_1525 | CDS | 1771652:1774024 - | A1185 B406 C122 | 10.98 | 1.31 | Probable TonB-dependent outer membrane receptor precursor | 2500 | 2223 | |
THC0290_1526 | CDS | 1774415:1775356 - | A1796 B549 C143 | 10.13 | 1.73 | Protein of unknown function precursor | 2501 | 3879 | |
THC0290_1527 | CDS | 1775368:1782057 - | A1796 B549 C143 | 11.08 | 2.20 | Protein of unknown function precursor containing a C-terminal secretion signal. Putative adhesin | 2502 | 3880 | |